Query 039957
Match_columns 481
No_of_seqs 501 out of 3405
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 05:23:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.8E-47 9.4E-52 409.0 27.9 343 2-345 282-714 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.7E-46 5.8E-51 402.9 27.6 342 1-346 259-691 (768)
3 4eco_A Uncharacterized protein 100.0 1.9E-43 6.3E-48 371.1 21.4 306 24-344 194-545 (636)
4 4eco_A Uncharacterized protein 100.0 2.4E-43 8.1E-48 370.3 22.0 329 2-346 196-577 (636)
5 3v47_A TOLL-like receptor 5B a 100.0 1.4E-42 4.8E-47 351.1 24.6 327 13-346 30-406 (455)
6 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-41 5.2E-46 355.9 28.4 340 3-346 46-532 (606)
7 4ecn_A Leucine-rich repeat pro 100.0 1.8E-41 6E-46 362.6 23.2 328 2-346 438-817 (876)
8 3t6q_A CD180 antigen; protein- 100.0 1.3E-40 4.5E-45 348.8 28.8 339 4-345 48-486 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 6.8E-41 2.3E-45 351.0 26.6 332 4-346 25-508 (606)
10 3t6q_A CD180 antigen; protein- 100.0 4.3E-41 1.5E-45 352.5 24.8 338 4-345 26-459 (606)
11 4ecn_A Leucine-rich repeat pro 100.0 1.6E-41 5.6E-46 362.8 20.5 330 1-345 335-786 (876)
12 2id5_A Lingo-1, leucine rich r 100.0 2.4E-40 8.2E-45 336.7 25.2 312 4-327 25-336 (477)
13 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-40 9.7E-45 339.9 22.7 320 4-345 14-454 (520)
14 2z63_A TOLL-like receptor 4, v 100.0 6.8E-40 2.3E-44 340.8 23.3 335 5-345 44-504 (570)
15 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-39 8.9E-44 343.5 27.0 330 7-343 43-438 (680)
16 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-39 5.3E-44 337.4 24.2 324 4-345 45-507 (562)
17 3v47_A TOLL-like receptor 5B a 100.0 9.6E-40 3.3E-44 330.3 21.2 320 15-346 12-382 (455)
18 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-38 3.7E-43 338.7 30.0 336 2-345 235-594 (680)
19 3j0a_A TOLL-like receptor 5; m 100.0 2.6E-39 8.7E-44 350.7 22.5 271 5-276 40-375 (844)
20 2id5_A Lingo-1, leucine rich r 100.0 8.5E-39 2.9E-43 325.3 23.5 319 15-346 13-331 (477)
21 2z81_A CD282 antigen, TOLL-lik 100.0 5.5E-39 1.9E-43 332.5 22.5 148 188-345 331-483 (549)
22 3j0a_A TOLL-like receptor 5; m 100.0 1E-38 3.5E-43 345.9 24.8 312 4-325 18-376 (844)
23 2z63_A TOLL-like receptor 4, v 100.0 9.8E-39 3.4E-43 332.1 23.6 330 4-346 21-481 (570)
24 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-38 4.2E-43 327.6 21.4 331 3-346 35-479 (520)
25 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.2E-38 1.4E-42 326.6 22.2 316 3-328 66-514 (562)
26 4g8a_A TOLL-like receptor 4; l 100.0 4.6E-37 1.6E-41 323.4 29.3 339 6-346 69-578 (635)
27 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-37 7.1E-42 320.7 22.6 332 3-346 40-508 (549)
28 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-36 5.4E-41 319.3 27.0 333 4-346 45-553 (635)
29 3o6n_A APL1; leucine-rich repe 100.0 1.5E-36 5.1E-41 300.6 24.8 306 12-345 44-349 (390)
30 1ogq_A PGIP-2, polygalacturona 100.0 6.1E-37 2.1E-41 293.8 20.7 253 37-301 50-306 (313)
31 3oja_B Anopheles plasmodium-re 100.0 1.4E-36 4.8E-41 317.0 25.1 297 3-327 64-361 (597)
32 1o6v_A Internalin A; bacterial 100.0 2.6E-36 8.9E-41 305.8 26.0 306 5-345 61-385 (466)
33 1ogq_A PGIP-2, polygalacturona 100.0 1E-36 3.6E-41 292.1 20.2 249 62-322 50-302 (313)
34 3o6n_A APL1; leucine-rich repe 100.0 2.8E-36 9.7E-41 298.6 23.3 297 3-327 58-355 (390)
35 3oja_B Anopheles plasmodium-re 100.0 3.2E-36 1.1E-40 314.3 23.5 308 11-346 49-356 (597)
36 4fmz_A Internalin; leucine ric 100.0 1.9E-35 6.3E-40 288.0 24.1 305 8-345 39-343 (347)
37 2ft3_A Biglycan; proteoglycan, 100.0 3.4E-35 1.2E-39 284.3 25.6 287 38-345 34-330 (332)
38 2ft3_A Biglycan; proteoglycan, 100.0 2E-35 6.9E-40 285.9 23.3 299 3-322 17-331 (332)
39 4fmz_A Internalin; leucine ric 100.0 5.3E-35 1.8E-39 284.8 24.8 289 4-324 58-346 (347)
40 3bz5_A Internalin-J, INLJ; leu 100.0 2.2E-35 7.5E-40 297.1 22.2 259 4-299 33-298 (457)
41 1xku_A Decorin; proteoglycan, 100.0 1.5E-34 5E-39 279.6 25.9 289 37-345 31-329 (330)
42 1xku_A Decorin; proteoglycan, 100.0 2.4E-34 8.4E-39 278.1 24.6 290 13-322 31-330 (330)
43 1o6v_A Internalin A; bacterial 100.0 3.3E-34 1.1E-38 290.4 26.6 289 5-326 83-390 (466)
44 1jl5_A Outer protein YOPM; leu 100.0 2.2E-34 7.5E-39 289.6 20.7 303 3-344 24-366 (454)
45 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-33 3.8E-38 284.7 25.7 282 5-325 57-353 (457)
46 3oja_A Leucine-rich immune mol 100.0 1.7E-36 5.9E-41 307.8 4.2 30 373-402 323-352 (487)
47 1jl5_A Outer protein YOPM; leu 100.0 7.3E-32 2.5E-36 271.2 24.6 282 13-346 111-407 (454)
48 2z66_A Variable lymphocyte rec 100.0 3.9E-32 1.3E-36 259.8 20.3 249 16-277 10-262 (306)
49 2z66_A Variable lymphocyte rec 100.0 1.3E-32 4.4E-37 263.1 16.6 248 39-300 9-261 (306)
50 2z80_A TOLL-like receptor 2, v 100.0 6.7E-33 2.3E-37 270.5 12.8 279 37-328 31-318 (353)
51 1z7x_W Ribonuclease inhibitor; 100.0 4.6E-35 1.6E-39 296.4 -5.9 333 9-345 24-408 (461)
52 2z80_A TOLL-like receptor 2, v 100.0 3.8E-32 1.3E-36 265.2 13.9 283 10-304 28-318 (353)
53 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-31 6.6E-36 252.3 15.8 224 40-276 14-238 (285)
54 4fcg_A Uncharacterized protein 100.0 4.7E-31 1.6E-35 254.3 18.6 233 37-276 81-314 (328)
55 3zyi_A Leucine-rich repeat-con 100.0 2.8E-30 9.7E-35 260.4 23.6 249 38-325 55-304 (452)
56 3zyj_A Leucine-rich repeat-con 100.0 3.7E-30 1.3E-34 258.6 24.1 249 38-325 44-293 (440)
57 4fcg_A Uncharacterized protein 100.0 1.4E-30 4.7E-35 251.1 19.9 226 61-300 80-314 (328)
58 3o53_A Protein LRIM1, AGAP0063 100.0 5.1E-32 1.7E-36 260.2 9.4 258 14-295 11-270 (317)
59 3zyi_A Leucine-rich repeat-con 100.0 6.9E-30 2.4E-34 257.6 24.1 245 64-346 56-301 (452)
60 3zyj_A Leucine-rich repeat-con 100.0 7.1E-30 2.4E-34 256.6 23.5 248 14-276 44-292 (440)
61 3o53_A Protein LRIM1, AGAP0063 100.0 1.7E-32 5.8E-37 263.5 3.9 258 38-343 11-270 (317)
62 1wwl_A Monocyte differentiatio 100.0 5E-32 1.7E-36 259.6 5.8 252 33-301 39-310 (312)
63 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-33 7.3E-38 284.2 -5.2 317 4-326 47-413 (461)
64 1ozn_A Reticulon 4 receptor; N 100.0 5E-30 1.7E-34 242.5 17.5 254 65-331 14-268 (285)
65 3g06_A SSPH2 (leucine-rich rep 100.0 3.6E-29 1.2E-33 259.3 24.5 270 13-336 40-309 (622)
66 1wwl_A Monocyte differentiatio 100.0 5.1E-31 1.7E-35 252.6 8.0 250 60-325 41-310 (312)
67 3oja_A Leucine-rich immune mol 100.0 4E-30 1.4E-34 261.0 12.6 234 38-295 35-270 (487)
68 4asz_A BDNF/NT-3 growth factor 100.0 4.3E-30 1.5E-34 242.6 9.8 135 341-479 21-178 (299)
69 3omv_A RAF proto-oncogene seri 100.0 9.6E-30 3.3E-34 240.2 12.0 133 341-479 44-182 (307)
70 4aoj_A High affinity nerve gro 100.0 1.1E-29 3.7E-34 243.1 11.3 135 341-479 49-208 (329)
71 4gt4_A Tyrosine-protein kinase 100.0 2.2E-29 7.7E-34 238.7 10.8 135 341-479 34-195 (308)
72 3g06_A SSPH2 (leucine-rich rep 100.0 8.5E-28 2.9E-32 249.0 21.2 255 4-311 54-308 (622)
73 2z62_A TOLL-like receptor 4, v 100.0 2.3E-27 8E-32 223.1 17.9 227 17-277 11-238 (276)
74 2z62_A TOLL-like receptor 4, v 99.9 4.5E-27 1.5E-31 221.1 19.0 214 4-229 21-238 (276)
75 3hmm_A TGF-beta receptor type- 99.9 5.2E-28 1.8E-32 229.7 10.1 138 338-479 8-158 (303)
76 4fih_A Serine/threonine-protei 99.9 9.3E-28 3.2E-32 229.5 11.7 134 341-480 82-221 (346)
77 4b9d_A Serine/threonine-protei 99.9 1.9E-27 6.4E-32 227.8 11.9 136 341-480 32-176 (350)
78 3rfs_A Internalin B, repeat mo 99.9 3.8E-27 1.3E-31 221.0 11.2 186 141-336 62-247 (272)
79 4fie_A Serine/threonine-protei 99.9 5E-27 1.7E-31 230.1 12.4 133 342-480 160-298 (423)
80 2o6q_A Variable lymphocyte rec 99.9 9.4E-26 3.2E-30 211.3 19.1 202 39-277 18-219 (270)
81 2o6q_A Variable lymphocyte rec 99.9 1.3E-25 4.3E-30 210.5 19.7 204 63-302 17-220 (270)
82 3fpq_A Serine/threonine-protei 99.9 6.2E-27 2.1E-31 219.4 10.7 137 340-479 33-182 (290)
83 3rfs_A Internalin B, repeat mo 99.9 1.2E-26 4.1E-31 217.7 11.8 224 38-284 20-243 (272)
84 4g3f_A NF-kappa-beta-inducing 99.9 8.4E-27 2.9E-31 222.2 10.8 129 341-479 66-201 (336)
85 4aw0_A HPDK1, 3-phosphoinositi 99.9 6.7E-27 2.3E-31 220.3 9.9 135 340-479 39-182 (311)
86 4ase_A Vascular endothelial gr 99.9 7.3E-27 2.5E-31 225.3 10.2 136 340-479 71-235 (353)
87 4g31_A Eukaryotic translation 99.9 1.3E-26 4.4E-31 219.1 10.9 136 341-480 13-169 (299)
88 2xwt_C Thyrotropin receptor; s 99.9 1.4E-25 4.9E-30 206.1 16.3 196 38-249 32-236 (239)
89 1p9a_G Platelet glycoprotein I 99.9 3.2E-25 1.1E-29 209.6 18.9 203 33-276 6-208 (290)
90 1p9a_G Platelet glycoprotein I 99.9 7.3E-25 2.5E-29 207.2 20.5 205 106-326 6-210 (290)
91 3goz_A Leucine-rich repeat-con 99.9 1.5E-27 5.1E-32 233.3 1.5 259 17-280 2-301 (362)
92 3hyh_A Carbon catabolite-derep 99.9 5.6E-26 1.9E-30 211.0 11.9 134 341-480 21-163 (275)
93 4glp_A Monocyte differentiatio 99.9 4.2E-26 1.4E-30 218.2 8.6 230 13-253 64-308 (310)
94 3ubd_A Ribosomal protein S6 ki 99.9 2E-26 6.8E-31 217.0 6.0 135 340-479 31-176 (304)
95 4glp_A Monocyte differentiatio 99.9 1.4E-25 4.6E-30 214.7 11.9 225 36-277 63-308 (310)
96 2ast_B S-phase kinase-associat 99.9 2.3E-26 8E-31 222.6 6.4 253 15-283 49-313 (336)
97 2xwt_C Thyrotropin receptor; s 99.9 1.9E-24 6.6E-29 198.6 18.0 205 49-273 23-236 (239)
98 3goz_A Leucine-rich repeat-con 99.9 6.2E-27 2.1E-31 229.0 0.8 266 41-331 2-304 (362)
99 2ca6_A RAN GTPase-activating p 99.9 4.8E-27 1.7E-31 231.9 -0.3 247 29-280 24-320 (386)
100 3ogk_B Coronatine-insensitive 99.9 3.5E-27 1.2E-31 246.2 -3.8 331 14-346 139-524 (592)
101 4ay9_X Follicle-stimulating ho 99.9 4.4E-24 1.5E-28 207.6 17.5 240 16-272 12-255 (350)
102 2ca6_A RAN GTPase-activating p 99.9 2.3E-26 8E-31 227.0 1.2 249 52-327 23-319 (386)
103 3ogk_B Coronatine-insensitive 99.9 8.7E-27 3E-31 243.2 -3.2 333 11-346 110-499 (592)
104 4ay9_X Follicle-stimulating ho 99.9 4.6E-24 1.6E-28 207.5 15.9 231 4-250 23-257 (350)
105 1h6u_A Internalin H; cell adhe 99.9 5.6E-24 1.9E-28 203.0 14.7 210 15-276 21-230 (308)
106 2ast_B S-phase kinase-associat 99.9 5E-25 1.7E-29 213.2 6.6 198 38-249 48-257 (336)
107 1h6u_A Internalin H; cell adhe 99.9 5.5E-24 1.9E-28 203.1 13.4 208 42-301 24-231 (308)
108 3m19_A Variable lymphocyte rec 99.9 1.7E-23 6E-28 193.6 16.4 177 39-228 16-192 (251)
109 3m19_A Variable lymphocyte rec 99.9 2.1E-23 7.3E-28 193.0 16.8 180 143-326 15-194 (251)
110 4b99_A Mitogen-activated prote 99.9 7.8E-24 2.7E-28 207.7 12.2 134 340-479 61-208 (398)
111 3uto_A Twitchin; kinase, muscl 99.9 2.9E-23 9.9E-28 213.6 12.4 136 341-480 165-308 (573)
112 3cvr_A Invasion plasmid antige 99.9 2.2E-23 7.7E-28 213.3 10.8 186 14-237 60-252 (571)
113 3v5w_A G-protein coupled recep 99.9 4.1E-23 1.4E-27 211.6 12.1 135 341-480 197-343 (689)
114 2p1m_B Transport inhibitor res 99.9 3.1E-25 1.1E-29 231.5 -6.0 176 167-344 289-490 (594)
115 4f9c_A Cell division cycle 7-r 99.9 6.2E-23 2.1E-27 199.1 10.4 131 339-479 27-168 (361)
116 2o6s_A Variable lymphocyte rec 99.9 5.7E-22 2E-26 178.0 14.8 180 16-215 10-189 (208)
117 2o6s_A Variable lymphocyte rec 99.9 2.6E-22 9E-27 180.2 12.2 181 39-239 9-189 (208)
118 3s95_A LIMK-1, LIM domain kina 99.9 2.7E-22 9.3E-27 191.7 13.0 135 341-479 18-158 (310)
119 2qol_A Ephrin receptor; recept 99.9 2E-22 6.8E-27 197.5 11.6 136 340-479 52-197 (373)
120 2qkw_B Protein kinase; three-h 99.9 5.2E-22 1.8E-26 190.7 13.5 136 340-479 46-189 (321)
121 3cvr_A Invasion plasmid antige 99.9 2.4E-22 8.2E-27 205.7 11.6 188 63-287 60-254 (571)
122 3kul_A Ephrin type-A receptor 99.9 5.8E-22 2E-26 190.7 12.0 136 340-479 56-201 (325)
123 3cbl_A C-FES, proto-oncogene t 99.9 3.8E-22 1.3E-26 196.0 10.9 135 341-479 122-263 (377)
124 4aw2_A Serine/threonine-protei 99.9 6.5E-22 2.2E-26 197.1 12.1 135 341-479 82-225 (437)
125 3ugc_A Tyrosine-protein kinase 99.9 2.7E-22 9.3E-27 190.3 8.8 135 341-479 18-164 (295)
126 3uim_A Brassinosteroid insensi 99.9 1.2E-21 4E-26 188.7 13.2 139 340-479 37-184 (326)
127 2p1m_B Transport inhibitor res 99.9 8.7E-24 3E-28 220.5 -2.3 337 6-346 122-517 (594)
128 2psq_A Fibroblast growth facto 99.9 1.2E-21 4E-26 192.0 12.4 135 341-479 89-253 (370)
129 2c30_A Serine/threonine-protei 99.9 1.3E-21 4.3E-26 188.0 11.9 133 341-479 53-191 (321)
130 2x4f_A Myosin light chain kina 99.9 1.1E-21 3.9E-26 192.1 11.8 135 341-479 97-239 (373)
131 2vd5_A DMPK protein; serine/th 99.9 1.2E-21 4.1E-26 193.8 11.8 135 341-479 69-212 (412)
132 4hcu_A Tyrosine-protein kinase 99.9 1.5E-21 5.2E-26 182.5 11.6 134 341-479 18-156 (269)
133 3fxz_A Serine/threonine-protei 99.9 1.6E-21 5.4E-26 185.2 11.7 133 341-479 28-166 (297)
134 3fe3_A MAP/microtubule affinit 99.9 1.6E-21 5.4E-26 187.6 11.7 134 341-479 23-164 (328)
135 1qcf_A Haematopoetic cell kina 99.8 1.2E-21 4.2E-26 197.1 10.5 136 340-480 195-335 (454)
136 3sxs_A Cytoplasmic tyrosine-pr 99.8 2.4E-21 8.3E-26 181.0 11.1 134 341-479 16-154 (268)
137 3p86_A Serine/threonine-protei 99.8 2.9E-21 9.8E-26 184.4 11.7 135 340-479 44-189 (309)
138 1h6t_A Internalin B; cell adhe 99.8 4.7E-21 1.6E-25 181.1 13.0 188 16-229 27-214 (291)
139 3e7e_A HBUB1, BUB1A, mitotic c 99.8 3.2E-21 1.1E-25 188.7 12.1 133 340-479 72-233 (365)
140 3zgw_A Maternal embryonic leuc 99.8 2.9E-21 9.8E-26 187.0 11.6 135 340-479 17-158 (347)
141 3soc_A Activin receptor type-2 99.8 2.3E-21 7.8E-26 186.3 10.7 135 341-479 32-181 (322)
142 1opk_A P150, C-ABL, proto-onco 99.8 2.5E-21 8.6E-26 196.8 11.5 135 340-479 227-368 (495)
143 3qd2_B Eukaryotic translation 99.8 3.1E-21 1.1E-25 186.0 11.5 135 341-479 14-214 (332)
144 1m9s_A Internalin B; cell inva 99.8 1.8E-21 6.3E-26 201.3 10.2 172 10-205 40-211 (605)
145 3gen_A Tyrosine-protein kinase 99.8 3.7E-21 1.3E-25 181.3 11.5 134 341-479 32-170 (283)
146 3niz_A Rhodanese family protei 99.8 4.5E-21 1.6E-25 183.2 12.2 134 341-479 29-169 (311)
147 2ozo_A Tyrosine-protein kinase 99.8 2E-21 6.7E-26 202.4 10.4 135 341-479 344-486 (613)
148 1m9s_A Internalin B; cell inva 99.8 2.4E-21 8.1E-26 200.5 10.6 190 15-254 23-212 (605)
149 3poz_A Epidermal growth factor 99.8 1.3E-21 4.4E-26 188.4 8.1 135 341-479 23-167 (327)
150 1kob_A Twitchin; kinase, intra 99.8 5.8E-21 2E-25 187.6 12.9 136 341-480 59-202 (387)
151 3v8s_A RHO-associated protein 99.8 3E-21 1E-25 190.8 10.9 133 341-479 77-218 (410)
152 3kex_A Receptor tyrosine-prote 99.8 3.8E-21 1.3E-25 185.0 11.2 135 341-479 21-165 (325)
153 1tki_A Titin; serine kinase, m 99.8 5.7E-21 1.9E-25 183.3 12.4 134 341-479 13-154 (321)
154 2v9t_B SLIT homolog 2 protein 99.8 2.2E-20 7.6E-25 168.9 15.4 153 171-326 15-167 (220)
155 3c1x_A Hepatocyte growth facto 99.8 2.8E-21 9.6E-26 189.2 10.1 136 340-479 96-242 (373)
156 1fot_A TPK1 delta, CAMP-depend 99.8 6.7E-21 2.3E-25 182.4 12.5 134 341-479 14-156 (318)
157 1h6t_A Internalin B; cell adhe 99.8 7.7E-21 2.6E-25 179.7 12.6 189 38-252 25-213 (291)
158 1dce_A Protein (RAB geranylger 99.8 2.4E-23 8.3E-28 214.1 -5.1 188 60-279 347-549 (567)
159 2xot_A Amphoterin-induced prot 99.8 9.2E-21 3.2E-25 184.9 13.4 158 168-325 40-203 (361)
160 4fvq_A Tyrosine-protein kinase 99.8 4.5E-21 1.5E-25 181.2 10.8 135 341-479 16-171 (289)
161 1dce_A Protein (RAB geranylger 99.8 2E-23 7E-28 214.7 -5.9 204 34-270 346-567 (567)
162 1fmk_A C-SRC, P60-SRC, tyrosin 99.8 2.7E-21 9.2E-26 194.5 9.5 135 340-479 191-330 (452)
163 1o6l_A RAC-beta serine/threoni 99.8 4.9E-21 1.7E-25 184.7 10.9 133 341-478 13-154 (337)
164 1k9a_A Carboxyl-terminal SRC k 99.8 6.3E-21 2.2E-25 191.7 12.1 132 341-479 201-339 (450)
165 2v70_A SLIT-2, SLIT homolog 2 99.8 2.4E-20 8.3E-25 168.7 14.7 155 145-327 14-169 (220)
166 3vhe_A Vascular endothelial gr 99.8 3.9E-21 1.3E-25 187.5 10.2 135 341-479 30-243 (359)
167 2w1i_A JAK2; chromosomal rearr 99.8 6.9E-21 2.4E-25 183.3 11.7 135 341-479 49-195 (326)
168 2v9t_B SLIT homolog 2 protein 99.8 2E-20 7E-25 169.2 14.1 152 40-204 14-165 (220)
169 3tt0_A Basic fibroblast growth 99.8 7.7E-21 2.6E-25 187.1 12.2 136 340-479 76-241 (382)
170 3lb7_A RAF proto-oncogene seri 99.8 7E-21 2.4E-25 181.6 11.4 134 340-479 43-182 (307)
171 2xot_A Amphoterin-induced prot 99.8 6.7E-21 2.3E-25 185.9 11.4 176 16-204 21-202 (361)
172 4fr4_A YANK1, serine/threonine 99.8 8E-21 2.7E-25 186.1 11.8 134 341-479 23-165 (384)
173 3lxl_A Tyrosine-protein kinase 99.8 4.7E-21 1.6E-25 184.5 9.9 135 341-479 31-177 (327)
174 4f0f_A Serine/threonine-protei 99.8 1.8E-20 6.2E-25 176.9 13.7 136 340-479 26-179 (287)
175 4eqm_A Protein kinase; transfe 99.8 8E-21 2.7E-25 180.0 11.2 134 341-479 19-161 (294)
176 3f66_A Hepatocyte growth facto 99.8 9.9E-21 3.4E-25 179.7 11.8 136 340-479 32-178 (298)
177 3tki_A Serine/threonine-protei 99.8 8.2E-21 2.8E-25 182.4 11.1 134 341-479 15-155 (323)
178 3t9t_A Tyrosine-protein kinase 99.8 8.8E-21 3E-25 177.0 11.0 134 341-479 16-154 (267)
179 2yab_A Death-associated protei 99.8 1.3E-20 4.5E-25 183.4 12.5 136 340-480 19-170 (361)
180 3txo_A PKC-L, NPKC-ETA, protei 99.8 8.2E-21 2.8E-25 184.4 10.9 133 341-478 31-173 (353)
181 4e5w_A Tyrosine-protein kinase 99.8 7E-21 2.4E-25 181.1 10.2 135 341-479 29-176 (302)
182 3pls_A Macrophage-stimulating 99.8 1.3E-20 4.3E-25 178.9 11.9 136 340-479 28-174 (298)
183 1ob3_A PFPK5, cell division co 99.8 6.5E-21 2.2E-25 180.1 9.9 134 341-479 10-150 (288)
184 2h8h_A Proto-oncogene tyrosine 99.8 4.6E-21 1.6E-25 196.7 9.4 136 340-480 274-414 (535)
185 1mp8_A Focal adhesion kinase 1 99.8 6.1E-21 2.1E-25 179.6 9.5 136 340-479 22-166 (281)
186 1luf_A Muscle-specific tyrosin 99.8 5.1E-21 1.8E-25 185.5 9.2 135 341-479 55-224 (343)
187 4euu_A Serine/threonine-protei 99.8 1.2E-20 4.1E-25 181.0 11.7 137 339-479 15-166 (319)
188 2nru_A Interleukin-1 receptor- 99.8 1.9E-20 6.6E-25 178.5 12.9 134 341-479 39-183 (307)
189 4dc2_A Protein kinase C IOTA t 99.8 9E-21 3.1E-25 186.4 10.7 133 341-478 60-202 (396)
190 3p1a_A MYT1 kinase, membrane-a 99.8 8.5E-21 2.9E-25 181.4 10.1 134 341-479 65-207 (311)
191 1rdq_E PKA C-alpha, CAMP-depen 99.8 1.2E-20 4.3E-25 183.0 11.3 134 341-479 49-191 (350)
192 2acx_A G protein-coupled recep 99.8 1.4E-20 4.8E-25 192.2 12.2 136 341-480 192-337 (576)
193 2zv2_A Calcium/calmodulin-depe 99.8 1.2E-20 4E-25 179.2 10.9 133 341-479 21-187 (298)
194 1xjd_A Protein kinase C, theta 99.8 1.1E-20 3.9E-25 182.7 10.9 134 341-479 25-168 (345)
195 3l9p_A Anaplastic lymphoma kin 99.8 6.2E-21 2.1E-25 186.6 9.1 134 341-478 79-233 (367)
196 2y0a_A Death-associated protei 99.8 2.3E-20 8E-25 179.5 13.0 134 341-479 19-168 (326)
197 2ivs_A Proto-oncogene tyrosine 99.8 1.4E-20 4.8E-25 180.0 11.4 135 341-479 31-200 (314)
198 2v70_A SLIT-2, SLIT homolog 2 99.8 5.5E-20 1.9E-24 166.3 14.7 154 113-278 14-168 (220)
199 1u5q_A Serine/threonine protei 99.8 7.8E-21 2.7E-25 184.4 9.7 135 341-480 62-205 (348)
200 2y94_A 5'-AMP-activated protei 99.8 2.1E-20 7.1E-25 188.2 12.7 134 341-479 24-166 (476)
201 3a8x_A Protein kinase C IOTA t 99.8 1.6E-20 5.5E-25 181.9 11.5 133 341-478 17-159 (345)
202 1rjb_A FL cytokine receptor; k 99.8 1.4E-20 4.9E-25 182.4 11.1 136 340-479 52-222 (344)
203 4azs_A Methyltransferase WBDD; 99.8 7.4E-21 2.5E-25 195.7 9.4 130 343-480 244-390 (569)
204 2izr_A Casein kinase I isoform 99.8 1.5E-20 5.1E-25 181.2 11.0 133 340-479 16-160 (330)
205 1qpc_A LCK kinase; alpha beta 99.8 1.4E-20 4.9E-25 176.8 10.5 134 341-479 21-159 (279)
206 3a62_A Ribosomal protein S6 ki 99.8 1.2E-20 4E-25 181.7 10.1 134 340-478 24-170 (327)
207 2pvf_A Fibroblast growth facto 99.8 2.8E-20 9.6E-25 179.6 12.7 135 341-479 43-207 (334)
208 2vuw_A Serine/threonine-protei 99.8 2E-21 6.7E-26 187.9 4.6 133 341-479 28-232 (336)
209 1u59_A Tyrosine-protein kinase 99.8 1.8E-20 6E-25 177.0 11.0 136 340-479 17-160 (287)
210 3c0i_A Peripheral plasma membr 99.8 2E-20 6.7E-25 181.9 11.5 137 340-480 31-184 (351)
211 2pmi_A Negative RE, cyclin-dep 99.8 2.2E-20 7.4E-25 179.1 11.6 134 341-479 13-158 (317)
212 3o0g_A Cell division protein k 99.8 2.1E-20 7.3E-25 176.9 11.4 134 341-479 10-151 (292)
213 2bdw_A Hypothetical protein K1 99.8 3.1E-20 1.1E-24 181.2 12.7 135 341-480 37-182 (362)
214 1mqb_A Ephrin type-A receptor 99.8 2E-20 6.9E-25 180.5 11.2 137 339-479 50-197 (333)
215 1t46_A HOMO sapiens V-KIT hard 99.8 1.6E-20 5.6E-25 179.4 10.4 135 341-479 31-195 (313)
216 3lzb_A Epidermal growth factor 99.8 1.6E-20 5.6E-25 180.7 10.3 135 341-479 23-167 (327)
217 3e6j_A Variable lymphocyte rec 99.8 1.2E-19 4.1E-24 165.2 15.4 155 169-327 21-175 (229)
218 3cok_A Serine/threonine-protei 99.8 2.8E-20 9.4E-25 174.8 11.5 135 341-479 19-162 (278)
219 3e6j_A Variable lymphocyte rec 99.8 7.4E-20 2.5E-24 166.6 13.8 153 15-181 21-173 (229)
220 4fl3_A Tyrosine-protein kinase 99.8 7.4E-21 2.5E-25 198.5 8.1 134 341-479 377-519 (635)
221 3qup_A Tyrosine-protein kinase 99.8 1.2E-20 4E-25 181.4 8.8 136 340-479 30-187 (323)
222 3dls_A PAS domain-containing s 99.8 3.2E-20 1.1E-24 179.2 12.0 134 341-479 32-180 (335)
223 1xeu_A Internalin C; cellular 99.8 7.1E-21 2.4E-25 177.1 7.0 171 11-206 17-187 (263)
224 3q4u_A Activin receptor type-1 99.8 2.2E-20 7.7E-25 177.4 10.7 134 340-479 15-163 (301)
225 3soa_A Calcium/calmodulin-depe 99.8 4.8E-20 1.7E-24 184.2 13.4 135 341-480 19-164 (444)
226 4ejn_A RAC-alpha serine/threon 99.8 9.7E-21 3.3E-25 190.2 8.4 135 341-479 156-299 (446)
227 3cc6_A Protein tyrosine kinase 99.8 2.2E-20 7.6E-25 175.7 10.3 136 340-479 19-163 (281)
228 3h4j_B AMPK kdaid, SNF1-like p 99.8 1.9E-20 6.4E-25 180.5 9.7 134 340-479 16-158 (336)
229 3og7_A AKAP9-BRAF fusion prote 99.8 2E-20 7E-25 176.8 9.7 134 340-479 31-170 (289)
230 2eva_A TAK1 kinase - TAB1 chim 99.8 5E-20 1.7E-24 175.7 12.4 135 341-479 16-156 (307)
231 3rp9_A Mitogen-activated prote 99.8 3.6E-20 1.2E-24 186.8 12.0 134 340-479 60-206 (458)
232 4eut_A Serine/threonine-protei 99.8 2.6E-20 9E-25 184.1 10.7 138 339-480 15-167 (396)
233 2i0e_A Protein kinase C-beta I 99.8 2.1E-20 7.1E-25 181.5 9.8 133 341-478 28-170 (353)
234 2buj_A Serine/threonine-protei 99.8 3.1E-20 1.1E-24 177.9 10.9 135 341-479 37-184 (317)
235 3i6u_A CDS1, serine/threonine- 99.8 3.7E-20 1.3E-24 184.3 11.6 136 340-480 142-293 (419)
236 3c4z_A Rhodopsin kinase; Ser/T 99.8 4.7E-20 1.6E-24 187.9 12.6 135 341-479 193-339 (543)
237 3gni_B Strad alpha; kinase fol 99.8 4E-20 1.4E-24 182.4 11.7 134 341-478 33-177 (389)
238 3f3z_A Calcium/calmodulin-depe 99.8 2.8E-20 9.5E-25 174.7 10.0 135 340-479 16-159 (277)
239 3ork_A Serine/threonine protei 99.8 7.5E-21 2.6E-25 181.8 5.9 138 337-479 16-166 (311)
240 2w4o_A Calcium/calmodulin-depe 99.8 4E-20 1.4E-24 179.5 11.0 133 340-479 60-201 (349)
241 3lxp_A Non-receptor tyrosine-p 99.8 6E-20 2E-24 176.1 12.0 133 341-479 39-184 (318)
242 3byv_A Rhoptry kinase; malaria 99.8 6.9E-21 2.4E-25 187.1 5.6 135 340-479 80-256 (377)
243 4ezg_A Putative uncharacterize 99.8 8.5E-20 2.9E-24 162.2 12.1 153 34-204 41-194 (197)
244 3brb_A Proto-oncogene tyrosine 99.8 5.1E-20 1.8E-24 176.1 11.1 135 341-479 42-197 (313)
245 3kn6_A Ribosomal protein S6 ki 99.8 7.5E-20 2.6E-24 175.9 12.0 132 340-479 18-159 (325)
246 3mtl_A Cell division protein k 99.8 3.1E-20 1.1E-24 178.5 9.2 134 341-479 10-150 (324)
247 3uc3_A Serine/threonine-protei 99.8 6.3E-20 2.1E-24 179.0 11.5 132 341-478 28-167 (361)
248 2ac3_A MAP kinase-interacting 99.8 5.6E-20 1.9E-24 176.0 10.9 136 339-479 19-164 (316)
249 1xeu_A Internalin C; cellular 99.8 9.4E-21 3.2E-25 176.3 5.3 168 35-227 17-184 (263)
250 1p4o_A Insulin-like growth fac 99.8 3.4E-20 1.2E-24 178.0 9.5 135 341-479 33-188 (322)
251 2j7t_A Serine/threonine-protei 99.8 3.1E-20 1E-24 176.6 9.0 133 341-477 27-165 (302)
252 3is5_A Calcium-dependent prote 99.8 8.1E-20 2.8E-24 172.3 11.7 137 339-479 28-177 (285)
253 3op5_A Serine/threonine-protei 99.8 3.5E-20 1.2E-24 181.2 9.4 135 340-479 42-204 (364)
254 2xir_A Vascular endothelial gr 99.8 4.2E-20 1.4E-24 176.9 9.6 135 341-479 35-198 (316)
255 2clq_A Mitogen-activated prote 99.8 6.6E-20 2.3E-24 173.7 10.9 136 340-479 29-173 (295)
256 3g2f_A Bone morphogenetic prot 99.8 1E-19 3.6E-24 175.7 12.3 135 341-479 21-170 (336)
257 1vzo_A Ribosomal protein S6 ki 99.8 3.6E-20 1.2E-24 180.3 8.9 134 341-479 62-209 (355)
258 2a2a_A Death-associated protei 99.8 1.2E-19 4.1E-24 174.2 12.4 134 341-479 20-169 (321)
259 3kfa_A Tyrosine-protein kinase 99.8 5.8E-20 2E-24 173.5 10.0 135 341-480 21-162 (288)
260 2r5t_A Serine/threonine-protei 99.8 4.3E-20 1.5E-24 180.6 9.3 133 341-478 46-188 (373)
261 2pml_X PFPK7, Ser/Thr protein 99.8 5.1E-20 1.7E-24 178.8 9.8 135 341-479 39-202 (348)
262 1zy4_A Serine/threonine-protei 99.8 1E-19 3.4E-24 173.0 11.6 134 341-479 14-166 (303)
263 1ua2_A CAK, cell division prot 99.8 5.4E-20 1.8E-24 178.5 9.7 134 341-479 18-162 (346)
264 2j0j_A Focal adhesion kinase 1 99.8 7.8E-20 2.7E-24 191.5 11.6 136 341-480 398-542 (656)
265 3g33_A Cell division protein k 99.8 1.3E-19 4.5E-24 172.8 12.2 136 340-480 16-171 (308)
266 3n9x_A Phosphotransferase; mal 99.8 9.4E-20 3.2E-24 182.2 11.7 134 340-479 33-179 (432)
267 3kmu_A ILK, integrin-linked ki 99.8 1.1E-19 3.9E-24 169.7 11.6 133 341-478 18-162 (271)
268 4b8c_D Glucose-repressible alc 99.8 9.9E-21 3.4E-25 200.6 4.6 142 30-184 217-358 (727)
269 3oz6_A Mitogen-activated prote 99.8 1E-19 3.4E-24 179.5 11.5 132 341-479 17-159 (388)
270 1u46_A ACK-1, activated CDC42 99.8 6.6E-20 2.3E-24 173.3 9.6 135 341-479 26-171 (291)
271 2a19_B Interferon-induced, dou 99.8 1E-19 3.5E-24 171.3 10.6 132 340-479 18-172 (284)
272 1cm8_A Phosphorylated MAP kina 99.8 1.1E-19 3.6E-24 177.8 11.0 132 341-479 33-178 (367)
273 1x8b_A WEE1HU, WEE1-like prote 99.8 1.1E-19 3.8E-24 171.3 10.7 135 341-479 19-184 (289)
274 3ttj_A Mitogen-activated prote 99.8 1.1E-19 3.6E-24 183.1 11.0 131 341-479 70-214 (464)
275 4agu_A Cyclin-dependent kinase 99.8 1.2E-19 4.2E-24 173.3 10.9 134 341-479 11-152 (311)
276 1csn_A Casein kinase-1; phosph 99.8 1.9E-19 6.6E-24 170.7 12.1 132 341-479 18-161 (298)
277 3pg1_A Mitogen-activated prote 99.8 1.1E-19 3.7E-24 177.5 10.6 135 340-479 29-184 (362)
278 2rku_A Serine/threonine-protei 99.8 1.8E-19 6.2E-24 170.7 11.5 135 340-479 22-165 (294)
279 2i1m_A Macrophage colony-stimu 99.8 7.1E-20 2.4E-24 176.7 8.8 136 340-479 53-214 (333)
280 3fdn_A Serine/threonine-protei 99.8 1.4E-19 4.8E-24 170.1 10.6 134 341-479 17-159 (279)
281 2zmd_A Dual specificity protei 99.8 2.1E-19 7.3E-24 177.1 12.3 133 340-479 63-204 (390)
282 2owb_A Serine/threonine-protei 99.8 1.8E-19 6.3E-24 174.0 11.6 135 340-479 48-191 (335)
283 1byg_A CSK, protein (C-termina 99.8 6.5E-20 2.2E-24 172.3 8.0 132 341-479 29-167 (278)
284 3mdy_A Bone morphogenetic prot 99.8 2.3E-19 7.7E-24 173.4 12.1 133 341-479 45-192 (337)
285 2eue_A Carbon catabolite derep 99.8 2.1E-19 7E-24 168.5 11.3 134 340-479 20-162 (275)
286 2yex_A Serine/threonine-protei 99.8 2.2E-19 7.6E-24 168.3 11.5 134 341-479 15-155 (276)
287 3bhy_A Death-associated protei 99.8 2.7E-19 9.1E-24 168.5 12.0 134 341-479 13-162 (283)
288 3ll6_A Cyclin G-associated kin 99.8 2.3E-19 7.9E-24 173.2 11.8 135 340-479 35-188 (337)
289 3hko_A Calcium/calmodulin-depe 99.8 1.1E-19 3.7E-24 176.3 9.5 135 341-479 34-220 (345)
290 3pfq_A PKC-B, PKC-beta, protei 99.8 2.3E-19 7.8E-24 188.6 12.6 133 341-478 349-491 (674)
291 2wqm_A Serine/threonine-protei 99.8 2.2E-19 7.4E-24 171.5 11.4 135 341-479 40-186 (310)
292 3dbq_A Dual specificity protei 99.8 1.9E-19 6.5E-24 174.5 11.1 134 340-479 16-157 (343)
293 2jam_A Calcium/calmodulin-depe 99.8 2.2E-19 7.4E-24 171.0 11.3 134 341-479 17-159 (304)
294 3sb4_A Hypothetical leucine ri 99.8 2.1E-19 7.3E-24 173.0 11.3 292 3-317 13-327 (329)
295 2y7j_A Phosphorylase B kinase 99.8 2.2E-19 7.7E-24 175.4 11.6 135 340-479 101-250 (365)
296 1fvr_A Tyrosine-protein kinase 99.8 1.9E-19 6.6E-24 173.2 10.9 135 340-478 32-191 (327)
297 2ycf_A Serine/threonine-protei 99.8 2.2E-19 7.7E-24 172.4 11.3 135 341-480 18-168 (322)
298 3sb4_A Hypothetical leucine ri 99.8 6.4E-20 2.2E-24 176.7 7.5 287 35-341 23-327 (329)
299 3com_A Serine/threonine-protei 99.8 1.6E-19 5.6E-24 172.6 10.3 133 341-479 37-175 (314)
300 2vwi_A Serine/threonine-protei 99.8 5.7E-20 2E-24 174.8 7.0 136 340-479 22-171 (303)
301 1xbb_A Tyrosine-protein kinase 99.8 1.5E-19 5E-24 171.1 9.7 135 340-479 24-167 (291)
302 3dtc_A Mitogen-activated prote 99.8 1.8E-19 6.2E-24 168.5 10.1 136 340-479 14-166 (271)
303 3q60_A ROP5B; pseudokinase, tr 99.8 4.4E-20 1.5E-24 180.9 6.2 135 341-480 70-245 (371)
304 2h6d_A 5'-AMP-activated protei 99.8 1.9E-19 6.5E-24 168.8 10.2 134 341-479 19-161 (276)
305 3kk8_A Calcium/calmodulin depe 99.8 3.3E-19 1.1E-23 167.9 11.9 134 341-479 14-158 (284)
306 3a7i_A MST3 kinase, serine/thr 99.8 2.8E-19 9.5E-24 170.1 11.4 133 341-479 30-169 (303)
307 1nxk_A MAP kinase-activated pr 99.8 1.5E-19 5.1E-24 178.7 9.8 131 340-479 69-214 (400)
308 2vgo_A Serine/threonine-protei 99.8 2.6E-19 8.8E-24 168.7 10.9 134 341-479 22-164 (284)
309 3mi9_A Cell division protein k 99.8 2.4E-19 8E-24 174.4 10.5 134 341-479 25-174 (351)
310 2w5a_A Serine/threonine-protei 99.8 1.4E-19 4.7E-24 170.0 8.6 139 341-479 14-166 (279)
311 3eqc_A Dual specificity mitoge 99.8 1.8E-19 6.2E-24 175.8 9.7 134 341-478 41-181 (360)
312 3lij_A Calcium/calmodulin depe 99.8 2.7E-19 9.2E-24 182.1 11.3 134 341-479 45-189 (494)
313 1t4h_A Serine/threonine-protei 99.8 3.6E-19 1.2E-23 168.2 11.4 135 340-479 33-182 (290)
314 1phk_A Phosphorylase kinase; g 99.8 4.4E-19 1.5E-23 168.3 12.0 134 341-479 25-174 (298)
315 3nyv_A Calmodulin-domain prote 99.8 2.3E-19 8E-24 182.2 10.7 135 340-479 33-179 (484)
316 2qr7_A Ribosomal protein S6 ki 99.8 3.9E-19 1.3E-23 171.9 11.6 130 341-479 30-170 (342)
317 2yfx_A Tyrosine-protein kinase 99.8 2.2E-19 7.6E-24 172.8 9.8 134 341-478 38-192 (327)
318 2i6l_A Mitogen-activated prote 99.8 3.4E-19 1.2E-23 170.7 11.1 132 341-479 19-171 (320)
319 4aaa_A Cyclin-dependent kinase 99.8 3E-19 1E-23 172.2 10.7 134 341-479 33-174 (331)
320 3llt_A Serine/threonine kinase 99.8 4.6E-19 1.6E-23 173.0 12.1 133 341-479 43-212 (360)
321 2fst_X Mitogen-activated prote 99.8 1.9E-19 6.4E-24 175.9 9.1 132 341-479 37-182 (367)
322 3nsz_A CK II alpha, casein kin 99.8 5E-19 1.7E-23 170.5 11.9 128 341-479 44-181 (330)
323 3mwu_A Calmodulin-domain prote 99.8 3.2E-19 1.1E-23 181.2 11.1 135 340-479 29-174 (486)
324 2h34_A Serine/threonine-protei 99.8 2.2E-19 7.6E-24 171.4 9.2 134 341-479 42-184 (309)
325 3eb0_A Putative uncharacterize 99.8 4.7E-19 1.6E-23 174.4 11.6 130 341-479 15-192 (383)
326 2v62_A Serine/threonine-protei 99.8 2E-19 6.7E-24 174.5 8.4 134 340-479 44-203 (345)
327 3lm5_A Serine/threonine-protei 99.8 5.2E-19 1.8E-23 170.2 11.1 135 341-479 37-184 (327)
328 3q5i_A Protein kinase; CDPK, m 99.8 4.8E-19 1.7E-23 180.6 11.5 135 340-479 43-199 (504)
329 2y4i_B KSR2, HKSR2, kinase sup 99.8 2.4E-19 8.1E-24 171.9 8.5 133 340-479 40-179 (319)
330 2jii_A Serine/threonine-protei 99.8 1.5E-19 5.2E-24 175.8 7.1 130 340-479 49-211 (352)
331 3qyz_A Mitogen-activated prote 99.8 5.5E-19 1.9E-23 172.7 11.1 132 341-479 35-178 (364)
332 3an0_A Dual specificity mitoge 99.8 3.3E-19 1.1E-23 172.5 9.5 135 341-479 59-204 (340)
333 2b9h_A MAP kinase FUS3, mitoge 99.8 7E-19 2.4E-23 171.1 11.7 133 340-479 18-162 (353)
334 3gbz_A Kinase, CMGC CDK; ssgci 99.8 2.2E-19 7.6E-24 172.9 8.1 133 341-479 42-187 (329)
335 4hgt_A Casein kinase I isoform 99.8 3.8E-19 1.3E-23 168.5 9.5 134 339-479 15-158 (296)
336 3gxj_A TGF-beta receptor type- 99.8 5.7E-20 2E-24 174.7 3.8 135 339-479 9-158 (303)
337 1b6c_B TGF-B superfamily recep 99.8 7.2E-19 2.5E-23 170.2 11.5 133 341-479 50-197 (342)
338 4b8c_D Glucose-repressible alc 99.8 6.8E-20 2.3E-24 194.2 4.6 223 37-300 173-404 (727)
339 3m2w_A MAP kinase-activated pr 99.8 6.3E-19 2.2E-23 167.4 10.5 133 339-480 24-171 (299)
340 1j1b_A Glycogen synthase kinas 99.8 4.5E-19 1.5E-23 176.5 9.6 131 340-479 61-207 (420)
341 3fme_A Dual specificity mitoge 99.8 4.6E-19 1.6E-23 167.4 9.1 134 341-479 15-160 (290)
342 3rgf_A Cyclin-dependent kinase 99.8 4.1E-19 1.4E-23 176.1 9.2 132 341-479 29-182 (405)
343 3uzp_A CKI-delta, CKID, casein 99.8 5.2E-19 1.8E-23 167.6 9.3 133 340-479 16-158 (296)
344 2xrw_A Mitogen-activated prote 99.8 9E-19 3.1E-23 171.5 11.1 131 341-479 33-177 (371)
345 2r3i_A Cell division protein k 99.8 4.4E-19 1.5E-23 168.4 8.5 132 342-478 12-152 (299)
346 2wtk_C Serine/threonine-protei 99.8 1.1E-18 3.8E-23 166.1 11.0 135 340-479 12-159 (305)
347 4exu_A Mitogen-activated prote 99.8 1E-18 3.6E-23 171.1 10.7 132 340-479 49-194 (371)
348 4ezg_A Putative uncharacterize 99.8 2.3E-18 8E-23 152.9 12.0 151 168-325 45-195 (197)
349 2x7f_A TRAF2 and NCK-interacti 99.8 9.7E-19 3.3E-23 168.2 10.3 134 341-479 32-179 (326)
350 1w8a_A SLIT protein; signaling 99.8 1.6E-18 5.6E-23 153.1 10.8 133 16-159 11-143 (192)
351 3coi_A Mitogen-activated prote 99.8 1.2E-18 4.1E-23 169.5 10.6 132 340-479 31-176 (353)
352 2iwi_A Serine/threonine-protei 99.8 6.3E-19 2.2E-23 168.4 8.4 135 340-479 38-190 (312)
353 1blx_A Cyclin-dependent kinase 99.8 1.4E-18 4.9E-23 167.0 10.8 134 341-479 19-170 (326)
354 2pzi_A Probable serine/threoni 99.8 5.7E-19 2E-23 186.6 8.5 133 340-480 87-232 (681)
355 3uqc_A Probable conserved tran 99.8 1E-18 3.5E-23 164.7 9.3 131 340-477 38-177 (286)
356 2wei_A Calmodulin-domain prote 99.8 2.4E-18 8.1E-23 162.4 11.4 134 341-479 30-174 (287)
357 4e7w_A Glycogen synthase kinas 99.8 8.7E-19 3E-23 173.0 8.7 132 340-479 47-192 (394)
358 2rio_A Serine/threonine-protei 99.8 1.1E-18 3.6E-23 174.6 9.4 134 339-480 21-179 (434)
359 3p23_A Serine/threonine-protei 99.8 9.1E-19 3.1E-23 174.7 8.3 132 340-479 31-173 (432)
360 3sv0_A Casein kinase I-like; t 99.8 2.1E-18 7.1E-23 173.9 10.8 134 339-479 13-156 (483)
361 3a99_A Proto-oncogene serine/t 99.7 1.9E-18 6.4E-23 165.8 9.9 136 340-480 50-201 (320)
362 3kvw_A DYRK2, dual specificity 99.7 2.6E-18 9E-23 171.4 11.3 134 340-479 104-252 (429)
363 3cek_A Dual specificity protei 99.7 3.4E-18 1.2E-22 163.4 11.1 134 340-479 35-176 (313)
364 3qa8_A MGC80376 protein; kinas 99.7 3.1E-18 1.1E-22 176.9 10.8 136 340-479 21-174 (676)
365 1zar_A RIO2 kinase; serine kin 99.7 1.3E-18 4.5E-23 163.2 7.0 126 339-480 96-243 (282)
366 4fdw_A Leucine rich hypothetic 99.7 1.6E-16 5.5E-21 156.3 22.0 264 13-323 113-382 (401)
367 2ell_A Acidic leucine-rich nuc 99.7 5.5E-18 1.9E-22 146.4 10.2 138 11-156 22-161 (168)
368 1wak_A Serine/threonine-protei 99.7 3.3E-18 1.1E-22 169.1 9.6 120 341-466 45-184 (397)
369 3en9_A Glycoprotease, O-sialog 99.7 3E-18 1E-22 175.3 9.0 125 340-480 343-480 (540)
370 1z57_A Dual specificity protei 99.7 6.2E-18 2.1E-22 163.2 10.7 133 341-479 22-187 (339)
371 3aln_A Dual specificity mitoge 99.7 4.9E-18 1.7E-22 163.3 9.9 134 341-479 30-176 (327)
372 1w8a_A SLIT protein; signaling 99.7 1.7E-17 5.9E-22 146.5 12.1 112 216-327 30-142 (192)
373 2dyl_A Dual specificity mitoge 99.7 7.4E-18 2.5E-22 161.3 9.9 135 341-479 33-175 (318)
374 3e3p_A Protein kinase, putativ 99.7 8.4E-18 2.9E-22 164.0 10.1 137 340-480 30-183 (360)
375 3fhr_A MAP kinase-activated pr 99.7 8.6E-18 2.9E-22 162.3 9.8 132 339-479 35-181 (336)
376 2wfh_A SLIT homolog 2 protein 99.7 4.3E-17 1.5E-21 144.0 13.0 128 16-156 13-140 (193)
377 3dzo_A Rhoptry kinase domain; 99.7 8.4E-18 2.9E-22 166.9 8.6 136 340-479 85-261 (413)
378 2vx3_A Dual specificity tyrosi 99.7 2.7E-17 9.2E-22 161.7 11.9 136 340-479 61-211 (382)
379 1q8y_A SR protein kinase; tran 99.7 8.6E-18 2.9E-22 164.7 8.1 133 341-479 27-188 (373)
380 2je0_A Acidic leucine-rich nuc 99.7 8.6E-18 2.9E-22 142.1 6.9 131 12-150 16-148 (149)
381 2eu9_A Dual specificity protei 99.7 3.1E-17 1.1E-21 159.4 10.2 134 340-479 26-192 (355)
382 4fdw_A Leucine rich hypothetic 99.7 1.1E-15 3.8E-20 150.4 20.7 246 8-299 131-382 (401)
383 2o6r_A Variable lymphocyte rec 99.7 1.5E-16 5.1E-21 138.6 12.1 133 15-159 9-141 (177)
384 2ell_A Acidic leucine-rich nuc 99.7 5.5E-17 1.9E-21 140.1 8.9 130 168-299 25-159 (168)
385 2wfh_A SLIT homolog 2 protein 99.7 2.5E-16 8.6E-21 139.1 13.2 128 195-326 14-141 (193)
386 2o6r_A Variable lymphocyte rec 99.7 4.5E-16 1.5E-20 135.6 13.1 132 194-328 10-141 (177)
387 2je0_A Acidic leucine-rich nuc 99.7 7.9E-17 2.7E-21 136.1 7.6 109 167-277 17-127 (149)
388 1a9n_A U2A', U2A'; complex (nu 99.6 2E-16 6.9E-21 137.6 8.2 110 9-124 15-127 (176)
389 1zth_A RIO1 serine protein kin 99.6 1.5E-16 5E-21 147.4 6.2 130 341-479 55-219 (258)
390 1ds9_A Outer arm dynein; leuci 99.6 8.2E-18 2.8E-22 149.5 -3.4 139 8-159 13-157 (198)
391 1a9n_A U2A', U2A'; complex (nu 99.6 7.9E-16 2.7E-20 133.8 9.2 136 31-179 13-152 (176)
392 1ds9_A Outer arm dynein; leuci 99.6 5.1E-18 1.8E-22 150.8 -5.4 109 33-155 14-128 (198)
393 4fs7_A Uncharacterized protein 99.6 2.3E-14 7.8E-19 141.3 19.6 309 8-343 66-374 (394)
394 3g39_A Variable lymphocyte rec 99.6 6.8E-15 2.3E-19 127.0 10.4 104 40-155 12-115 (170)
395 3g39_A Variable lymphocyte rec 99.6 7.7E-15 2.6E-19 126.7 9.8 109 14-126 10-118 (170)
396 2r9u_A Variable lymphocyte rec 99.6 1.4E-14 4.8E-19 125.5 10.4 104 40-155 15-118 (174)
397 2r9u_A Variable lymphocyte rec 99.5 1.6E-14 5.5E-19 125.1 10.1 108 15-126 14-121 (174)
398 4fs7_A Uncharacterized protein 99.5 1.1E-12 3.6E-17 129.4 21.1 296 24-345 58-353 (394)
399 3un9_A NLR family member X1; l 99.5 7.1E-16 2.4E-20 150.3 -4.2 38 168-205 212-253 (372)
400 2ifg_A High affinity nerve gro 99.4 7.1E-13 2.4E-17 128.3 10.4 105 17-125 12-118 (347)
401 4gt6_A Cell surface protein; l 99.4 4.7E-11 1.6E-15 117.5 23.2 311 8-343 58-386 (394)
402 4gt6_A Cell surface protein; l 99.4 6.7E-11 2.3E-15 116.4 23.6 300 25-346 51-368 (394)
403 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.5E-17 126.4 10.6 106 40-157 11-118 (347)
404 4gyi_A RIO2 kinase; protein ki 99.4 5E-13 1.7E-17 128.7 6.0 126 341-477 103-263 (397)
405 3un9_A NLR family member X1; l 99.3 7.8E-14 2.7E-18 135.9 -1.1 165 62-231 72-255 (372)
406 4h09_A Hypothetical leucine ri 99.2 5.1E-09 1.8E-13 102.3 24.1 303 9-335 42-356 (379)
407 4h09_A Hypothetical leucine ri 99.1 8.7E-09 3E-13 100.7 23.6 291 7-312 63-357 (379)
408 2ra8_A Uncharacterized protein 99.0 7.6E-10 2.6E-14 106.8 8.3 187 13-204 107-320 (362)
409 2ra8_A Uncharacterized protein 98.9 5.6E-10 1.9E-14 107.7 4.5 186 6-202 132-341 (362)
410 3rw6_A Nuclear RNA export fact 98.7 1.6E-09 5.3E-14 99.3 1.2 89 33-124 137-234 (267)
411 1io0_A Tropomodulin; LRR prote 98.7 3.1E-09 1.1E-13 92.6 2.3 120 31-155 30-164 (185)
412 3tm0_A Aminoglycoside 3'-phosp 98.7 2.5E-08 8.6E-13 92.0 8.2 130 342-478 23-213 (263)
413 1nd4_A Aminoglycoside 3'-phosp 98.7 3.6E-08 1.2E-12 90.8 9.0 124 343-478 30-214 (264)
414 1io0_A Tropomodulin; LRR prote 98.6 6.3E-09 2.1E-13 90.6 1.4 117 60-180 34-164 (185)
415 3rw6_A Nuclear RNA export fact 98.6 5.5E-09 1.9E-13 95.7 0.7 69 83-159 167-237 (267)
416 3dxp_A Putative acyl-COA dehyd 98.4 4.6E-07 1.6E-11 87.7 9.1 132 343-478 48-248 (359)
417 3e4g_A ATP synthase subunit S, 97.9 5.6E-06 1.9E-10 70.3 4.0 85 36-121 60-150 (176)
418 3sg8_A APH(2'')-ID; antibiotic 97.7 0.0001 3.6E-09 69.1 9.7 127 343-478 30-223 (304)
419 3e4g_A ATP synthase subunit S, 97.7 2.5E-05 8.6E-10 66.2 4.4 84 62-153 61-150 (176)
420 3r70_A Aminoglycoside phosphot 97.7 0.00018 6.3E-09 68.0 11.0 126 343-478 47-237 (320)
421 3d1u_A Putative fructosamine-3 97.5 0.00049 1.7E-08 63.9 10.2 134 342-477 24-215 (288)
422 3tdw_A Gentamicin resistance p 97.4 0.00088 3E-08 62.8 11.0 126 344-478 30-224 (306)
423 1pgv_A TMD-1, tropomodulin TMD 97.4 8.7E-05 3E-09 64.2 3.5 121 33-155 37-170 (197)
424 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00013 4.3E-09 63.2 1.7 89 60-152 39-136 (197)
425 3ats_A Putative uncharacterize 97.1 0.00091 3.1E-08 64.2 7.5 32 447-478 221-252 (357)
426 3rfe_A Platelet glycoprotein I 97.1 0.00058 2E-08 55.0 4.9 33 90-122 35-67 (130)
427 3rfe_A Platelet glycoprotein I 96.9 0.0011 3.7E-08 53.4 5.6 55 17-74 12-67 (130)
428 4gkh_A Aminoglycoside 3'-phosp 96.9 0.0044 1.5E-07 56.7 10.1 123 348-478 40-223 (272)
429 3ovc_A Hygromycin-B 4-O-kinase 96.8 0.0016 5.5E-08 62.6 6.8 31 448-478 213-243 (362)
430 2olc_A MTR kinase, methylthior 96.1 0.026 9E-07 54.7 10.3 31 447-478 226-256 (397)
431 3f7w_A Putative fructosamine-3 95.8 0.03 1E-06 51.6 8.8 46 342-387 24-69 (288)
432 3dxq_A Choline/ethanolamine ki 95.0 0.046 1.6E-06 50.7 7.3 31 447-478 172-202 (301)
433 2q83_A YTAA protein; 2635576, 94.5 0.036 1.2E-06 52.3 5.2 32 447-478 221-252 (346)
434 1nw1_A Choline kinase (49.2 KD 94.1 0.053 1.8E-06 53.2 5.6 30 448-477 249-306 (429)
435 3jr1_A Putative fructosamine-3 92.7 1.1 3.9E-05 41.4 12.0 127 343-474 46-232 (312)
436 2pyw_A Uncharacterized protein 91.7 0.18 6.1E-06 49.2 5.4 31 447-478 231-261 (420)
437 3csv_A Aminoglycoside phosphot 88.9 0.5 1.7E-05 44.3 5.7 32 447-478 182-217 (333)
438 2ppq_A HSK, HK, homoserine kin 87.7 0.19 6.6E-06 46.8 1.9 31 447-477 186-216 (322)
439 1zyl_A Hypothetical protein YI 87.7 0.51 1.7E-05 44.0 4.9 30 447-478 194-223 (328)
440 3i1a_A Spectinomycin phosphotr 86.7 0.34 1.2E-05 45.7 3.0 32 447-478 205-236 (339)
441 3c5i_A Choline kinase; choline 82.8 0.59 2E-05 44.5 2.7 30 447-477 211-240 (369)
442 2qg7_A Ethanolamine kinase PV0 82.6 1.3 4.4E-05 43.6 5.1 31 447-477 289-356 (458)
443 3feg_A Choline/ethanolamine ki 80.2 1.6 5.3E-05 41.8 4.6 32 447-478 219-254 (379)
444 3f2s_A CK, chetk-alpha, cholin 79.5 1.7 5.7E-05 41.9 4.5 32 447-478 243-280 (401)
445 4ano_A ESSB; membrane protein, 74.9 2.8 9.4E-05 36.4 4.2 52 422-479 82-134 (219)
446 3mes_A Choline kinase; malaria 67.1 2.5 8.4E-05 41.1 2.4 30 448-478 262-291 (424)
447 4ann_A ESSB; membrane protein, 67.1 3.8 0.00013 35.4 3.3 53 421-479 77-129 (215)
448 3g15_A CK, chetk-alpha, cholin 66.3 3.1 0.00011 40.0 2.9 29 450-478 246-280 (401)
449 2lz0_A Uncharacterized protein 51.0 28 0.00097 25.7 5.3 46 24-71 7-52 (100)
450 2lz0_A Uncharacterized protein 39.9 70 0.0024 23.5 6.0 37 209-246 14-50 (100)
451 3cxl_A N-chimerin; SH2, RHO-GA 34.3 7.3 0.00025 38.2 -0.4 52 346-397 152-212 (463)
452 3feg_A Choline/ethanolamine ki 21.4 1.2E+02 0.0042 28.5 5.6 89 345-443 62-160 (379)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-47 Score=409.03 Aligned_cols=343 Identities=32% Similarity=0.462 Sum_probs=217.6
Q ss_pred eeccCcchhCC-CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecch
Q 039957 2 TGQIPTEIGNL-QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPN 80 (481)
Q Consensus 2 ~g~lp~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 80 (481)
+|.+|..+..+ ++|++|+|++|++++.+|..|.++++|++|++++|+++|.+|...+..+++|++|++++|++++.+|.
T Consensus 282 ~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~ 361 (768)
T 3rgz_A 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 361 (768)
T ss_dssp EESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCT
T ss_pred CCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccH
Confidence 46777776664 77777777777777777777777777777777777777777766334677777777777777777777
Q ss_pred hccccc-cCceeecccCcceecCcccccC--CCCCCEEEcccccCccccCCCcc----------------ccccccCCCC
Q 039957 81 SITNAT-KLIILDLGFNTFSGHIPNTFGN--LRHLSVLSLLMNNLTTESSSAYQ----------------WSFLSSLTNC 141 (481)
Q Consensus 81 ~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~----------------~~~~~~l~~l 141 (481)
.+..++ +|++|++++|.+++.+|..+.. +++|++|++++|++++..+..+. ...+..+.++
T Consensus 362 ~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 441 (768)
T 3rgz_A 362 SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441 (768)
T ss_dssp THHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred HHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcC
Confidence 666655 5555555555555544444443 44455555555444433111100 0011234455
Q ss_pred CCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeee
Q 039957 142 RYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFF 221 (481)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 221 (481)
++|++|++++|.+++.+|..+..+ ++|++|++++|++++.+|..+.++++|++|++++|++++.+|..++.+++|+.|+
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 520 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYV-KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCcccCcCCHHHcCC-CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEE
Confidence 566666666666666666655554 4566666666666666666666666666666666666666666666666666666
Q ss_pred cCCCcCCCCCCccccCccCCCeeecCCCeeeecCCccc------------------------------------------
Q 039957 222 LPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCL------------------------------------------ 259 (481)
Q Consensus 222 l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~------------------------------------------ 259 (481)
+++|++++.+|..++.+++|+.|++++|+++|.+|..+
T Consensus 521 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (768)
T 3rgz_A 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 600 (768)
T ss_dssp CCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCC
T ss_pred CCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccccccc
Confidence 66666666666666666666666666666665555432
Q ss_pred ----------------------------ccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCC
Q 039957 260 ----------------------------ASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLK 311 (481)
Q Consensus 260 ----------------------------~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 311 (481)
..+++|+.||+++|+++|.+|..+..++.|+.|++++|.+++.+|..+..++
T Consensus 601 ~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~ 680 (768)
T 3rgz_A 601 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680 (768)
T ss_dssp GGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred chhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCC
Confidence 2235566677777777777777777777777777777777777777777777
Q ss_pred cCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 312 VLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 312 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
.|+.|||++|+++|.+|..++.++.|++++++++
T Consensus 681 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N 714 (768)
T 3rgz_A 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714 (768)
T ss_dssp TCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECcCC
Confidence 7777777777777777777777777777766654
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-46 Score=402.89 Aligned_cols=342 Identities=33% Similarity=0.553 Sum_probs=277.9
Q ss_pred CeeccCcchhCCCCCCeeeCcCCcccccCChhccCC-cCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecc
Q 039957 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNI-STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIP 79 (481)
Q Consensus 1 ~~g~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p 79 (481)
++|.+|.. .+++|++|+|++|++++.+|..+... ++|++|++++|++++.+|..+. .+++|++|++++|++++.+|
T Consensus 259 l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~ip 335 (768)
T 3rgz_A 259 FVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG-SCSLLESLALSSNNFSGELP 335 (768)
T ss_dssp CEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGG-GCTTCCEEECCSSEEEEECC
T ss_pred ccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHh-cCCCccEEECCCCcccCcCC
Confidence 35677765 89999999999999999999998876 9999999999999999999887 79999999999999998988
Q ss_pred hh-ccccccCceeecccCcceecCcccccCCC-CCCEEEcccccCccccCCCcc------------------ccccccCC
Q 039957 80 NS-ITNATKLIILDLGFNTFSGHIPNTFGNLR-HLSVLSLLMNNLTTESSSAYQ------------------WSFLSSLT 139 (481)
Q Consensus 80 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~------------------~~~~~~l~ 139 (481)
.. +..+++|++|++++|.+++.+|..+.+++ +|++|++++|++++..+..+. ...+..+.
T Consensus 336 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~ 415 (768)
T 3rgz_A 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415 (768)
T ss_dssp HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGG
T ss_pred HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHh
Confidence 76 99999999999999999999999999998 999999999999864322111 02334566
Q ss_pred CCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCe
Q 039957 140 NCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQG 219 (481)
Q Consensus 140 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 219 (481)
++++|++|+|++|++++.+|..++.+ ++|+.|++++|.+++.+|..+..+++|++|++++|++++.+|..+..+++|+.
T Consensus 416 ~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 416 NCSELVSLHLSFNYLSGTIPSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cCCCCCEEECcCCcccCcccHHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 67777777777777777777777766 46777777777777777777777778888888888887777777888888888
Q ss_pred eecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchh---------------
Q 039957 220 FFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLW--------------- 284 (481)
Q Consensus 220 l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~--------------- 284 (481)
|++++|++++.+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|+++|.+|..++
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 88888888877888888888888888888888888888888888888888888887776665442
Q ss_pred -------------------------------------------------------ccccCcEEEccCcccCCCCCCcccc
Q 039957 285 -------------------------------------------------------SLGYILEINLSSNLLNDSLPSNVQK 309 (481)
Q Consensus 285 -------------------------------------------------------~l~~L~~L~l~~N~l~~~~p~~~~~ 309 (481)
.++.|+.|++++|++++.+|..++.
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 2355677888888888888888888
Q ss_pred CCcCcEEEccCCeeeeeccccccccCChhhhhccccc
Q 039957 310 LKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 310 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
++.|+.|+|++|+++|.+|..++.+++|+.|+++++.
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 8888888888888888888888888888888877653
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.9e-43 Score=371.12 Aligned_cols=306 Identities=19% Similarity=0.278 Sum_probs=235.5
Q ss_pred cccccCChhccCCcCCCEEEeeCCcCccc-----------------cChhhh-cCCCCccEEEccCccceeecchhcccc
Q 039957 24 NLSGLIPPMIFNISTIRNLNLGGNRLSGH-----------------LPSMIG-HSLPNIKYLELGDNNLIGTIPNSITNA 85 (481)
Q Consensus 24 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l 85 (481)
++++ +|+.|.++++|++|+|++|+++|. +|+.++ ..+++|++|+|++|++.+.+|..|.++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 678888888899999998888875 787764 158888899998888888888888888
Q ss_pred ccCceeecccCc-cee-cCcccccCC------CCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCcccee
Q 039957 86 TKLIILDLGFNT-FSG-HIPNTFGNL------RHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGI 157 (481)
Q Consensus 86 ~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 157 (481)
++|++|++++|+ +++ .+|..++.+ ++|++|++++|+++.++.. ..+.++++|++|++++|+++|.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~-------~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE-------TSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCH-------HHHTTCTTCCEEECCSCCCEEE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCch-------hhhccCCCCCEEeCcCCcCccc
Confidence 889999998888 888 788888776 8888888888888854320 0356778888888888888888
Q ss_pred CChhhhhcccCccEEEccCCceeecCCcccccCCC-CCeEecccccceecCCcCCcCCC--CCCeeecCCCcCCCCCCcc
Q 039957 158 LPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRG-LIYLSLGFNDLNGTIPTSIGTLK--QLQGFFLPETNLQGYVPHN 234 (481)
Q Consensus 158 ~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~l~--~L~~l~l~~n~l~~~~p~~ 234 (481)
+| .+..+ ++|++|++++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|+.|++++|.+++..|..
T Consensus 346 ip-~~~~l-~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 421 (636)
T 4eco_A 346 LP-AFGSE-IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKN 421 (636)
T ss_dssp CC-CCEEE-EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCS
T ss_pred hh-hhCCC-CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhh
Confidence 88 67665 57888888888888 77878888888 888888888887 6777776654 7888888888888887777
Q ss_pred cc-------CccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhc-c-------ccCcEEEccCccc
Q 039957 235 LC-------HLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWS-L-------GYILEINLSSNLL 299 (481)
Q Consensus 235 ~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l-------~~L~~L~l~~N~l 299 (481)
+. .+.+|+.|++++|+++..++..+..+++|++|++++|+++ .+|..... . +.|+.|++++|++
T Consensus 422 l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 422 FDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcC
Confidence 77 6677888888888887554455566778888888888887 44444332 2 2777888888887
Q ss_pred CCCCCCccc--cCCcCcEEEccCCeeeeeccccccccCChhhhhccc
Q 039957 300 NDSLPSNVQ--KLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAG 344 (481)
Q Consensus 300 ~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g 344 (481)
+ .+|..+. .+++|+.|++++|++++ +|..+..+++|+.|++++
T Consensus 501 ~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~ 545 (636)
T 4eco_A 501 T-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRN 545 (636)
T ss_dssp C-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCS
T ss_pred C-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCC
Confidence 7 4666665 77778888888888876 677777777787777754
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-43 Score=370.29 Aligned_cols=329 Identities=18% Similarity=0.304 Sum_probs=291.1
Q ss_pred eeccCcchhCCCCCCeeeCcCCccccc-----------------CChhcc--CCcCCCEEEeeCCcCccccChhhhcCCC
Q 039957 2 TGQIPTEIGNLQNLKSLFLGANNLSGL-----------------IPPMIF--NISTIRNLNLGGNRLSGHLPSMIGHSLP 62 (481)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~l~ 62 (481)
+| ||.+|+++++|++|+|++|++++. +|+.+. ++++|++|+|++|++.|.+|..++ .++
T Consensus 196 ~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~ 273 (636)
T 4eco_A 196 TF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALP 273 (636)
T ss_dssp EE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCS
T ss_pred cc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh-cCC
Confidence 57 999999999999999999999996 899999 999999999999999999999887 899
Q ss_pred CccEEEccCcc-cee-ecchhcccc------ccCceeecccCcceecCcc--cccCCCCCCEEEcccccCccccCCCccc
Q 039957 63 NIKYLELGDNN-LIG-TIPNSITNA------TKLIILDLGFNTFSGHIPN--TFGNLRHLSVLSLLMNNLTTESSSAYQW 132 (481)
Q Consensus 63 ~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 132 (481)
+|++|++++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .|+++++|++|++++|++++.-+
T Consensus 274 ~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip----- 347 (636)
T 4eco_A 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP----- 347 (636)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-----
T ss_pred CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-----
Confidence 99999999998 998 899999887 99999999999999 7888 99999999999999999994311
Q ss_pred cccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCC--CCCeEecccccceecCCcC
Q 039957 133 SFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLR--GLIYLSLGFNDLNGTIPTS 210 (481)
Q Consensus 133 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~~ 210 (481)
.+..+++|++|+|++|+++ .+|..+..+..+|++|++++|.++ .+|..+..+. +|++|++++|.+++.+|..
T Consensus 348 ----~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 421 (636)
T 4eco_A 348 ----AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKN 421 (636)
T ss_dssp ----CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCS
T ss_pred ----hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhh
Confidence 3567789999999999998 788888887433999999999999 7888887755 8999999999999999988
Q ss_pred Cc-------CCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCC-------CCCcEEcCCCcCc
Q 039957 211 IG-------TLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLT-------SLRELDLGSNKLT 276 (481)
Q Consensus 211 ~~-------~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-------~L~~L~ls~N~l~ 276 (481)
+. .+++|+.|++++|+++...+..+..+++|+.|++++|+++..++..+.... +|+.|++++|+++
T Consensus 422 l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 501 (636)
T 4eco_A 422 FDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT 501 (636)
T ss_dssp SCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC
T ss_pred hcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC
Confidence 88 788999999999999976555667789999999999999954444444433 8999999999998
Q ss_pred ccCCcchh--ccccCcEEEccCcccCCCCCCccccCCcCcEEEc------cCCeeeeeccccccccCChhhhhccccc
Q 039957 277 SSIPSSLW--SLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDL------SRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 277 ~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l------~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
.+|..+. .++.|+.|++++|++++ +|..+..+++|++|++ ++|++.+.+|..++.+++|+.|+++++.
T Consensus 502 -~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 577 (636)
T 4eco_A 502 -KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSND 577 (636)
T ss_dssp -BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred -ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCc
Confidence 7888886 89999999999999988 8889999999999999 5678888999999999999999988764
No 5
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-42 Score=351.09 Aligned_cols=327 Identities=19% Similarity=0.163 Sum_probs=250.8
Q ss_pred CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceee
Q 039957 13 QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILD 92 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 92 (481)
++|++|+|++|+++++.|..|.++++|++|++++|.+.+.++...+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68999999999999999999999999999999999998777665555899999999999999988899999999999999
Q ss_pred cccCcceecCccc--ccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcc-cCc
Q 039957 93 LGFNTFSGHIPNT--FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS-TSL 169 (481)
Q Consensus 93 Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-~~L 169 (481)
|++|.+++..|.. |+.+++|++|++++|+++++.+.. .+.++++|++|++++|++++..|..+..+. ..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L 182 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS-------FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHF 182 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG-------GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEE
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCccc-------ccCCCCcccEEeCCCCcccccChhhhhccccccc
Confidence 9999999866555 999999999999999998874322 156788999999999999988887776542 245
Q ss_pred cEEEccCCceeecCCcc--------cccCCCCCeEecccccceecCCcCC------------------------------
Q 039957 170 QRFSASECKLKGTIPKE--------IGHLRGLIYLSLGFNDLNGTIPTSI------------------------------ 211 (481)
Q Consensus 170 ~~L~l~~n~l~~~~p~~--------~~~l~~L~~L~l~~N~l~~~~p~~~------------------------------ 211 (481)
+.+++++|.+.+..+.. +..+++|++|++++|++++..|..+
T Consensus 183 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 262 (455)
T 3v47_A 183 TLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFK 262 (455)
T ss_dssp EEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSC
T ss_pred cccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhc
Confidence 55555555554332222 1133445555555554443322211
Q ss_pred -------cC--CCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcc
Q 039957 212 -------GT--LKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSS 282 (481)
Q Consensus 212 -------~~--l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 282 (481)
.. .++|+.+++++|.+.+..|..+..+++|+.|++++|++++..|..|..+++|++|++++|++++..|..
T Consensus 263 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 342 (455)
T 3v47_A 263 DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM 342 (455)
T ss_dssp CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG
T ss_pred cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhH
Confidence 11 256778888888888777777888888888888888888777777888888888888888887777777
Q ss_pred hhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhccccc
Q 039957 283 LWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 283 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
+..++.|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|+++++.
T Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 406 (455)
T 3v47_A 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 406 (455)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCC
Confidence 7788888888888888877777778888888888888888887666677778888888777653
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-41 Score=355.91 Aligned_cols=340 Identities=19% Similarity=0.171 Sum_probs=276.3
Q ss_pred eccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhc
Q 039957 3 GQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSI 82 (481)
Q Consensus 3 g~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 82 (481)
+..|..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..|..+. .+++|++|++++|++++..|..|
T Consensus 46 ~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~ 124 (606)
T 3vq2_A 46 ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFS-GLTSLENLVAVETKLASLESFPI 124 (606)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSST-TCTTCCEEECTTSCCCCSSSSCC
T ss_pred EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcC-CcccCCEEEccCCcccccccccc
Confidence 44455788899999999999999888888888999999999999998865576665 78899999999998887777788
Q ss_pred cccccCceeecccCccee-cCcccccCCCCCCEEEcccccCccccCCCcccc-------------------cc-------
Q 039957 83 TNATKLIILDLGFNTFSG-HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWS-------------------FL------- 135 (481)
Q Consensus 83 ~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-------------------~~------- 135 (481)
+++++|++|++++|.+++ .+|..|+++++|++|++++|+++++++..+... .+
T Consensus 125 ~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~ 204 (606)
T 3vq2_A 125 GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI 204 (606)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC
T ss_pred CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc
Confidence 888899999999998876 568888899999999888888877644322100 00
Q ss_pred --------------------------------------------------------------------------------
Q 039957 136 -------------------------------------------------------------------------------- 135 (481)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (481)
T Consensus 205 ~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l 284 (606)
T 3vq2_A 205 KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCL 284 (606)
T ss_dssp EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGG
T ss_pred eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccC
Confidence
Q ss_pred ----------------ccCCCCCCCcEEEccCCccceeCCh--------------------hhhhcccCccEEEccCCce
Q 039957 136 ----------------SSLTNCRYLVYLILSGNPLGGILPP--------------------SIGNFSTSLQRFSASECKL 179 (481)
Q Consensus 136 ----------------~~l~~l~~L~~L~Ls~N~l~~~~p~--------------------~~~~~~~~L~~L~l~~n~l 179 (481)
+.+..+++|++|++++|.+ +.+|. .++.+ ++|++|++++|.+
T Consensus 285 ~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l-~~L~~L~ls~n~l 362 (606)
T 3vq2_A 285 ANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVAL-PSLSYLDLSRNAL 362 (606)
T ss_dssp TTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCC-TTCCEEECCSSCE
T ss_pred CCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccC-CCCCEEECcCCcc
Confidence 0122233455555555554 23331 12222 5789999999999
Q ss_pred eec--CCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCC-ccccCccCCCeeecCCCeeeecCC
Q 039957 180 KGT--IPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVP-HNLCHLEMLNLLHLGGNKLSGHIP 256 (481)
Q Consensus 180 ~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p 256 (481)
++. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|+.|++++|++++..|
T Consensus 363 ~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 441 (606)
T 3vq2_A 363 SFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFD 441 (606)
T ss_dssp EEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCT
T ss_pred CCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccch
Confidence 876 48888999999999999999885 66889999999999999999998877 688899999999999999999889
Q ss_pred cccccCCCCCcEEcCCCcCcc-cCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccC
Q 039957 257 PCLASLTSLRELDLGSNKLTS-SIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALV 335 (481)
Q Consensus 257 ~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 335 (481)
..|..+++|++|++++|++++ .+|..+..++.|++|++++|.+++..|..+..+++|++|++++|++++..|..++.++
T Consensus 442 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 521 (606)
T 3vq2_A 442 GIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLY 521 (606)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCT
T ss_pred hhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCC
Confidence 999999999999999999987 4788899999999999999999988888899999999999999999988899999999
Q ss_pred Chhhhhccccc
Q 039957 336 DLETISLAGSF 346 (481)
Q Consensus 336 ~L~~l~~~g~~ 346 (481)
+|+.|+++++.
T Consensus 522 ~L~~L~l~~N~ 532 (606)
T 3vq2_A 522 SLSTLDCSFNR 532 (606)
T ss_dssp TCCEEECTTSC
T ss_pred cCCEEECCCCc
Confidence 99999988764
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.8e-41 Score=362.59 Aligned_cols=328 Identities=18% Similarity=0.263 Sum_probs=283.9
Q ss_pred eeccCcchhCCCCCCeeeCcCCcccc-----------------cCChhcc--CCcCCCEEEeeCCcCccccChhhhcCCC
Q 039957 2 TGQIPTEIGNLQNLKSLFLGANNLSG-----------------LIPPMIF--NISTIRNLNLGGNRLSGHLPSMIGHSLP 62 (481)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~l~ 62 (481)
+| ||.+|+++++|++|+|++|++++ .+|+.+. ++++|++|+|++|++.+.+|..+. .++
T Consensus 438 ~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~-~L~ 515 (876)
T 4ecn_A 438 TF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLY-DLP 515 (876)
T ss_dssp EE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGG-GCS
T ss_pred cc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHh-CCC
Confidence 45 99999999999999999999998 3888877 999999999999999999998887 799
Q ss_pred CccEEEccCcc-cee-ecchhccccc-------cCceeecccCcceecCcc--cccCCCCCCEEEcccccCccccCCCcc
Q 039957 63 NIKYLELGDNN-LIG-TIPNSITNAT-------KLIILDLGFNTFSGHIPN--TFGNLRHLSVLSLLMNNLTTESSSAYQ 131 (481)
Q Consensus 63 ~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~ 131 (481)
+|++|+|++|+ +++ .+|..+..++ +|++|+|++|.++ .+|. .|+++++|++|+|++|+++.++
T Consensus 516 ~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp----- 589 (876)
T 4ecn_A 516 ELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE----- 589 (876)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC-----
T ss_pred CCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch-----
Confidence 99999999998 998 8998888777 9999999999999 7888 9999999999999999998553
Q ss_pred ccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCC--CCeEecccccceecCCc
Q 039957 132 WSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRG--LIYLSLGFNDLNGTIPT 209 (481)
Q Consensus 132 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~p~ 209 (481)
.+..+++|++|+|++|+++ .+|..+..+..+|+.|++++|.++ .+|..+..+.. |+.|++++|++.+.+|.
T Consensus 590 -----~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 590 -----AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp -----CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred -----hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 3678899999999999999 788888887433999999999999 78888877654 99999999999887664
Q ss_pred CC---c--CCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCccccc-------CCCCCcEEcCCCcCcc
Q 039957 210 SI---G--TLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLAS-------LTSLRELDLGSNKLTS 277 (481)
Q Consensus 210 ~~---~--~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-------l~~L~~L~ls~N~l~~ 277 (481)
.. . .+++|+.|++++|+++...+..+..+++|+.|+|++|+++..++..+.. +++|+.|++++|+++
T Consensus 663 l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~- 741 (876)
T 4ecn_A 663 ISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT- 741 (876)
T ss_dssp CSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-
T ss_pred chhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-
Confidence 32 2 3458999999999999644444568899999999999998443333332 238999999999998
Q ss_pred cCCcchh--ccccCcEEEccCcccCCCCCCccccCCcCcEEEccC------CeeeeeccccccccCChhhhhccccc
Q 039957 278 SIPSSLW--SLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSR------NQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 278 ~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~------N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
.+|..+. .++.|+.|++++|++++ +|..+..+++|+.|++++ |++.+.+|..+..+++|+.|+++++.
T Consensus 742 ~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~ 817 (876)
T 4ecn_A 742 SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSND 817 (876)
T ss_dssp CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCC
Confidence 7888887 89999999999999987 788899999999999976 78888999999999999999988764
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.3e-40 Score=348.77 Aligned_cols=339 Identities=20% Similarity=0.173 Sum_probs=234.6
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
..|..|+++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..|..+. .+++|++|++++|++++..|..|.
T Consensus 48 ~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~l~~~~~~ 126 (606)
T 3t6q_A 48 IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALS-GPKALKHLFFIQTGISSIDFIPLH 126 (606)
T ss_dssp ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTS-SCTTCCEEECTTSCCSCGGGSCCT
T ss_pred CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhc-ccccccEeeccccCcccCCcchhc
Confidence 3455677777777777777777766677777777777777777777655455443 566666666666666554445555
Q ss_pred ccccCceeecccCccee------------------------cCcccccCCCCCC--EEEcccccCccccCCCcccc----
Q 039957 84 NATKLIILDLGFNTFSG------------------------HIPNTFGNLRHLS--VLSLLMNNLTTESSSAYQWS---- 133 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~------------------------~~p~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~~---- 133 (481)
++++|++|++++|.+++ ..|..|+.+++|+ .|++++|.++++++..+...
T Consensus 127 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~ 206 (606)
T 3t6q_A 127 NQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQS 206 (606)
T ss_dssp TCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEE
T ss_pred cCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccc
Confidence 55555555555555554 4444444445554 44555555444433222100
Q ss_pred ---------------------------------------------------------------ccccCCCCCCCcEEEcc
Q 039957 134 ---------------------------------------------------------------FLSSLTNCRYLVYLILS 150 (481)
Q Consensus 134 ---------------------------------------------------------------~~~~l~~l~~L~~L~Ls 150 (481)
....+..+++|++|+++
T Consensus 207 L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 286 (606)
T 3t6q_A 207 LNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLT 286 (606)
T ss_dssp EECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECT
T ss_pred cccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEecc
Confidence 01125667889999999
Q ss_pred CCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcC-CcCCCCCCeeecCCCcCCC
Q 039957 151 GNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTS-IGTLKQLQGFFLPETNLQG 229 (481)
Q Consensus 151 ~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~l~l~~n~l~~ 229 (481)
+|.++ .+|+.+..+ ++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|.. +..+++|+.|++++|.+++
T Consensus 287 ~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 364 (606)
T 3t6q_A 287 ATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364 (606)
T ss_dssp TSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCE
T ss_pred CCccC-CCChhhccc-ccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccc
Confidence 99888 577777766 57999999999998877888888888888888888887666544 7788888888888888877
Q ss_pred CC--CccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcc-hhccccCcEEEccCcccCCCCCCc
Q 039957 230 YV--PHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSS-LWSLGYILEINLSSNLLNDSLPSN 306 (481)
Q Consensus 230 ~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~ 306 (481)
.. |..+..+++|+.|++++|++.+..|..|..+++|+.|++++|++++..|.. +..++.|++|++++|.+.+..|..
T Consensus 365 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 444 (606)
T 3t6q_A 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQL 444 (606)
T ss_dssp EEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTT
T ss_pred ccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHH
Confidence 65 667778888888888888888777778888888888888888887665543 677778888888888887777777
Q ss_pred cccCCcCcEEEccCCeeeee---ccccccccCChhhhhcccc
Q 039957 307 VQKLKVLRVLDLSRNQLSGD---IPSTIGALVDLETISLAGS 345 (481)
Q Consensus 307 ~~~l~~L~~L~l~~N~l~~~---~p~~~~~l~~L~~l~~~g~ 345 (481)
+..+++|++|++++|++.+. .+..+..+++|++|+++++
T Consensus 445 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n 486 (606)
T 3t6q_A 445 FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFC 486 (606)
T ss_dssp TTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTS
T ss_pred HhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCC
Confidence 77777788888888877652 2355777777777777655
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.8e-41 Score=350.95 Aligned_cols=332 Identities=20% Similarity=0.165 Sum_probs=281.0
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|++++..|..+. .+++|++|+|++|++++..|.+|.
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~ 101 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWH-GLHHLSNLILTGNPIQSFSPGSFS 101 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCCCCTTSST
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhh-chhhcCEeECCCCcccccChhhcC
Confidence 5676654 7899999999999999999999999999999999999965566665 899999999999999988899999
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
++++|++|++++|.+++..|..|+++++|++|++++|.+++.. .+..+.++++|++|++++|++++..|..+.
T Consensus 102 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-------lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK-------LPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp TCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCC-------CCGGGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred CcccCCEEEccCCccccccccccCCCCCCCEEeCCCCccccee-------chHhHhhcCCCCEEEccCCcceecChhhhh
Confidence 9999999999999999888899999999999999999998642 124567788888888888888877665443
Q ss_pred hcc--------------------------cCccEEEccCCcee-------------------------------------
Q 039957 164 NFS--------------------------TSLQRFSASECKLK------------------------------------- 180 (481)
Q Consensus 164 ~~~--------------------------~~L~~L~l~~n~l~------------------------------------- 180 (481)
.+. .+|+.|++++|.++
T Consensus 175 ~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~ 254 (606)
T 3vq2_A 175 FLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSI 254 (606)
T ss_dssp HHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGG
T ss_pred hhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHH
Confidence 321 02333333333221
Q ss_pred -----------------------------------------------------------------ecCCc----------
Q 039957 181 -----------------------------------------------------------------GTIPK---------- 185 (481)
Q Consensus 181 -----------------------------------------------------------------~~~p~---------- 185 (481)
+.+|.
T Consensus 255 ~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~ 334 (606)
T 3vq2_A 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLT 334 (606)
T ss_dssp GTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEE
T ss_pred hhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceee
Confidence 12221
Q ss_pred ----------ccccCCCCCeEecccccceec--CCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeee
Q 039957 186 ----------EIGHLRGLIYLSLGFNDLNGT--IPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSG 253 (481)
Q Consensus 186 ----------~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 253 (481)
.+..+++|++|++++|.+++. +|..+..+++|+.|++++|.+.+ +|..+..+++|+.|++++|++.+
T Consensus 335 l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~ 413 (606)
T 3vq2_A 335 LTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKR 413 (606)
T ss_dssp EESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEES
T ss_pred ccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCC
Confidence 233456788888888888866 48889999999999999999987 56889999999999999999998
Q ss_pred cCC-cccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCC-CCCCccccCCcCcEEEccCCeeeeeccccc
Q 039957 254 HIP-PCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLND-SLPSNVQKLKVLRVLDLSRNQLSGDIPSTI 331 (481)
Q Consensus 254 ~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 331 (481)
..| ..|..+++|++|++++|++++..|..+..++.|++|++++|.+.+ .+|..+..+++|++|++++|++++..|..+
T Consensus 414 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 414 VTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp TTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 887 789999999999999999999999999999999999999999998 479999999999999999999999999999
Q ss_pred cccCChhhhhccccc
Q 039957 332 GALVDLETISLAGSF 346 (481)
Q Consensus 332 ~~l~~L~~l~~~g~~ 346 (481)
+.+++|++|+++++.
T Consensus 494 ~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 494 DTLHRLQLLNMSHNN 508 (606)
T ss_dssp TTCTTCCEEECCSSC
T ss_pred cccccCCEEECCCCc
Confidence 999999999998764
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.3e-41 Score=352.45 Aligned_cols=338 Identities=19% Similarity=0.186 Sum_probs=222.3
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+.. ++++|+|++|+|+++.|..|.++++|++|+|++|++++..|..+. .+++|++|+|++|++++..|.+|.
T Consensus 26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~ 102 (606)
T 3t6q_A 26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQ-SQHRLDTLVLTANPLIFMAETALS 102 (606)
T ss_dssp SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCSEECTTTTS
T ss_pred cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhcc-CccccCeeeCCCCcccccChhhhc
Confidence 56766653 799999999999999999999999999999999999976677775 899999999999999999999999
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCcc-c---------------cccccCCCCCCCc--
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQ-W---------------SFLSSLTNCRYLV-- 145 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~---------------~~~~~l~~l~~L~-- 145 (481)
++++|++|++++|.+++..|..|+++++|++|++++|++++++...+. . ..+..+..+++|+
T Consensus 103 ~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l 182 (606)
T 3t6q_A 103 GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL 182 (606)
T ss_dssp SCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSE
T ss_pred ccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhccccee
Confidence 999999999999999998889999999999999999999986322210 0 0011233444555
Q ss_pred EEEccCCccceeCChhhhhc--------------------------------------------------ccCccEEEcc
Q 039957 146 YLILSGNPLGGILPPSIGNF--------------------------------------------------STSLQRFSAS 175 (481)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~~--------------------------------------------------~~~L~~L~l~ 175 (481)
.|++++|.+++..|..+... ..+++.++++
T Consensus 183 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~ 262 (606)
T 3t6q_A 183 SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECT
T ss_pred EEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEee
Confidence 55666666555544332210 0034555555
Q ss_pred CCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCe-----
Q 039957 176 ECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNK----- 250 (481)
Q Consensus 176 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~----- 250 (481)
+|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.
T Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 341 (606)
T 3t6q_A 263 KHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLEL 341 (606)
T ss_dssp TCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBC
T ss_pred cCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccccc
Confidence 55555555555666666666666666665 455556666666666666666555555455555555555555554
Q ss_pred --------------------eeecC--CcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCC-cc
Q 039957 251 --------------------LSGHI--PPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPS-NV 307 (481)
Q Consensus 251 --------------------l~~~~--p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~ 307 (481)
+++.. |..+..+++|++|++++|++++..|..+..++.|++|++++|.+.+..|. .+
T Consensus 342 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 421 (606)
T 3t6q_A 342 GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPF 421 (606)
T ss_dssp CSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTT
T ss_pred chhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhh
Confidence 44333 44444555555555555555555555555555555555555555544332 25
Q ss_pred ccCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 308 QKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 308 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
..+++|++|++++|++.+..|..++.+++|++|+++++
T Consensus 422 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 459 (606)
T 3t6q_A 422 QNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGN 459 (606)
T ss_dssp TTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTC
T ss_pred hCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCC
Confidence 55555555555555555555555555566666655544
No 11
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-41 Score=362.82 Aligned_cols=330 Identities=18% Similarity=0.222 Sum_probs=281.9
Q ss_pred CeeccCcchhCCCCCCeeeC-cCCccccc---------------------------------------------------
Q 039957 1 MTGQIPTEIGNLQNLKSLFL-GANNLSGL--------------------------------------------------- 28 (481)
Q Consensus 1 ~~g~lp~~~~~l~~L~~L~L-~~N~l~~~--------------------------------------------------- 28 (481)
++|.+|++|++|++|++|+| ++|.++|.
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 47999999999999999999 77765444
Q ss_pred -------------------------CChhccCCcCCCEEEeeCCcCcc-----------------ccChhh-hcCCCCcc
Q 039957 29 -------------------------IPPMIFNISTIRNLNLGGNRLSG-----------------HLPSMI-GHSLPNIK 65 (481)
Q Consensus 29 -------------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~-~~~l~~L~ 65 (481)
+|..|.++++|++|+|++|+++| .+|+.+ +..+++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 78889999999999999999997 388876 23699999
Q ss_pred EEEccCccceeecchhccccccCceeecccCc-cee-cCcccccCCC-------CCCEEEcccccCccccCCCccccccc
Q 039957 66 YLELGDNNLIGTIPNSITNATKLIILDLGFNT-FSG-HIPNTFGNLR-------HLSVLSLLMNNLTTESSSAYQWSFLS 136 (481)
Q Consensus 66 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~~~~~~ 136 (481)
+|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..|+.++ +|++|+|++|+++.++.. .
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~-------~ 567 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPAS-------A 567 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCH-------H
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCCh-------h
Confidence 99999999999999999999999999999998 998 8888777665 999999999999865320 1
Q ss_pred cCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCC-CCeEecccccceecCCcCCcCCC
Q 039957 137 SLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRG-LIYLSLGFNDLNGTIPTSIGTLK 215 (481)
Q Consensus 137 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~l~ 215 (481)
.+.++++|++|+|++|+++ .+| .+..+ ++|+.|++++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L-~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~ 642 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVR-HLE-AFGTN-VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKS 642 (876)
T ss_dssp HHTTCTTCCEEECTTSCCC-BCC-CCCTT-SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTC
T ss_pred hhhcCCCCCEEECCCCCcc-cch-hhcCC-CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccc
Confidence 4678899999999999999 777 77776 68999999999999 88989999999 999999999998 7888888775
Q ss_pred C--CCeeecCCCcCCCCCCccc---c--CccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhc---
Q 039957 216 Q--LQGFFLPETNLQGYVPHNL---C--HLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWS--- 285 (481)
Q Consensus 216 ~--L~~l~l~~n~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~--- 285 (481)
. |+.|++++|++.+.+|... . .+.+|+.|++++|+++..++..+..+++|+.|++++|+++ .+|..+..
T Consensus 643 ~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~ 721 (876)
T 4ecn_A 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKD 721 (876)
T ss_dssp SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTT
T ss_pred cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccc
Confidence 5 9999999999998766433 2 3458999999999999544444558999999999999998 56655443
Q ss_pred -----cccCcEEEccCcccCCCCCCccc--cCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 286 -----LGYILEINLSSNLLNDSLPSNVQ--KLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 286 -----l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
++.|+.|++++|+++ .+|..+. .+++|+.|++++|++++ +|..+..+++|+.|+++++
T Consensus 722 ~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N 786 (876)
T 4ecn_A 722 GNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQ 786 (876)
T ss_dssp SCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCC
T ss_pred ccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCC
Confidence 238999999999998 6788886 89999999999999997 7889999999999998763
No 12
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=336.69 Aligned_cols=312 Identities=22% Similarity=0.218 Sum_probs=284.5
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+. +++++|+|++|+++++.|..|.++++|++|+|++|.+++..|..+. .+++|++|+|++|++++..+..|.
T Consensus 25 ~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~ 101 (477)
T 2id5_A 25 AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFN-NLFNLRTLGLRSNRLKLIPLGVFT 101 (477)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCSCCTTSST
T ss_pred cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhh-CCccCCEEECCCCcCCccCccccc
Confidence 4676553 5899999999999999999999999999999999999976677765 899999999999999977777899
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
++++|++|+|++|.+++..|..|.++++|++|++++|.++++.+. .+.++++|++|+|++|++++..+..+.
T Consensus 102 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--------~~~~l~~L~~L~l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 102 GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR--------AFSGLNSLEQLTLEKCNLTSIPTEALS 173 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT--------SSTTCTTCCEEEEESCCCSSCCHHHHT
T ss_pred CCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh--------hccCCCCCCEEECCCCcCcccChhHhc
Confidence 999999999999999999999999999999999999999987543 467889999999999999976666677
Q ss_pred hcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCe
Q 039957 164 NFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNL 243 (481)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~ 243 (481)
.+ ++|+.|++++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|+.|++++|+++...+..|..+++|+.
T Consensus 174 ~l-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 252 (477)
T 2id5_A 174 HL-HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252 (477)
T ss_dssp TC-TTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCE
T ss_pred cc-CCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCe
Confidence 76 68999999999999988889999999999999999988888888777789999999999999876678999999999
Q ss_pred eecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCee
Q 039957 244 LHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQL 323 (481)
Q Consensus 244 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 323 (481)
|++++|++++..+..|..+++|+.|++++|++++..|..|..++.|+.|++++|++++..+..|..+++|+.|++++|++
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 332 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 332 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCE
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred eeec
Q 039957 324 SGDI 327 (481)
Q Consensus 324 ~~~~ 327 (481)
.+.-
T Consensus 333 ~c~c 336 (477)
T 2id5_A 333 ACDC 336 (477)
T ss_dssp ECSG
T ss_pred cCcc
Confidence 8754
No 13
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=339.86 Aligned_cols=320 Identities=26% Similarity=0.341 Sum_probs=215.3
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+. ++|++|+|++|+++++.|..|.++++|++|+|++|++++..|..+. .+++|++|+|++|+++ .+|..
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~-~lp~~-- 87 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFK-FNQELEYLDLSHNKLV-KISCH-- 87 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGT-TCTTCCEEECCSSCCC-EEECC--
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhh-cccCCCEEecCCCcee-ecCcc--
Confidence 4676665 7888888888888888778888888888888888888865566665 7888888888888887 45554
Q ss_pred ccccCceeecccCccee-cCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCC--cEEEccCCcc--ceeC
Q 039957 84 NATKLIILDLGFNTFSG-HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYL--VYLILSGNPL--GGIL 158 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~ 158 (481)
.+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++.. +..+++| ++|++++|.+ .+..
T Consensus 88 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-----------~~~l~~L~L~~L~l~~n~l~~~~~~ 156 (520)
T 2z7x_B 88 PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSS-----------VLPIAHLNISKVLLVLGETYGEKED 156 (520)
T ss_dssp CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGG-----------GGGGTTSCEEEEEEEECTTTTSSCC
T ss_pred ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhh-----------ccccccceeeEEEeecccccccccc
Confidence 78888888888888887 46788888888888888888876521 1122223 4444444444 3333
Q ss_pred Chhhhhc-------------------------------------------------------------------------
Q 039957 159 PPSIGNF------------------------------------------------------------------------- 165 (481)
Q Consensus 159 p~~~~~~------------------------------------------------------------------------- 165 (481)
|..+..+
T Consensus 157 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 236 (520)
T 2z7x_B 157 PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNS 236 (520)
T ss_dssp TTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHH
T ss_pred cccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHH
Confidence 3222221
Q ss_pred ---------ccCccEEEccCCceeecCCccc-----ccCCCCCeEecccccceecCC-----------------------
Q 039957 166 ---------STSLQRFSASECKLKGTIPKEI-----GHLRGLIYLSLGFNDLNGTIP----------------------- 208 (481)
Q Consensus 166 ---------~~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~p----------------------- 208 (481)
.++|++|++++|+++|.+|..+ +.+++|+.+++++|.+ .+|
T Consensus 237 ~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l 314 (520)
T 2z7x_B 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRM 314 (520)
T ss_dssp HHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcc
Confidence 1257777777777777777666 4455444444444444 122
Q ss_pred --cC-CcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeee--cCCcccccCCCCCcEEcCCCcCcccCCc-c
Q 039957 209 --TS-IGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSG--HIPPCLASLTSLRELDLGSNKLTSSIPS-S 282 (481)
Q Consensus 209 --~~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~ 282 (481)
.. +..+++|+.|++++|++++..|..+..+++|+.|++++|++++ .+|..+..+++|++|++++|++++.+|. .
T Consensus 315 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 394 (520)
T 2z7x_B 315 VHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD 394 (520)
T ss_dssp CCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCS
T ss_pred ccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccch
Confidence 00 1466677777777777777777777777777777777777765 3445677777777777777777764444 3
Q ss_pred hhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 283 LWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 283 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
+..++.|++|++++|++++..|..+. ++|++|++++|+++ .+|..+..+++|+.|+++++
T Consensus 395 ~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 395 CSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred hccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCC
Confidence 56667777777777777665555443 56777777777776 56665667777777776655
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-40 Score=340.83 Aligned_cols=335 Identities=20% Similarity=0.214 Sum_probs=219.0
Q ss_pred cCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccc
Q 039957 5 IPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITN 84 (481)
Q Consensus 5 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 84 (481)
.|.+|.++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..|..+. .+++|++|++++|++++..+..|++
T Consensus 44 ~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~l~~~~~~~ 122 (570)
T 2z63_A 44 GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLENFPIGH 122 (570)
T ss_dssp CTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTSCCCCSTTCSCTT
T ss_pred ChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhc-CccccccccccccccccCCCccccc
Confidence 355778888888888888888887778888888888888888888744444443 6788888888888877655556777
Q ss_pred cccCceeecccCccee-cCcccccCCCCCCEEEcccccCccccCCCcc----------------------------c---
Q 039957 85 ATKLIILDLGFNTFSG-HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQ----------------------------W--- 132 (481)
Q Consensus 85 l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----------------------------~--- 132 (481)
+++|++|++++|.+++ .+|..|+++++|++|++++|.++++++..+. .
T Consensus 123 l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L 202 (570)
T 2z63_A 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRL 202 (570)
T ss_dssp CTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEE
T ss_pred cccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcc
Confidence 8888888888887776 3577788888888888888777655322110 0
Q ss_pred ----------------------------------------------------------------------cccccCCCCC
Q 039957 133 ----------------------------------------------------------------------SFLSSLTNCR 142 (481)
Q Consensus 133 ----------------------------------------------------------------------~~~~~l~~l~ 142 (481)
..+..+..++
T Consensus 203 ~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~ 282 (570)
T 2z63_A 203 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282 (570)
T ss_dssp EEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGT
T ss_pred eeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcC
Confidence 0011223345
Q ss_pred CCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcc--------------------cccCCCCCeEeccccc
Q 039957 143 YLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKE--------------------IGHLRGLIYLSLGFND 202 (481)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~--------------------~~~l~~L~~L~l~~N~ 202 (481)
+|++|++++|.++ .+|+.+... +|++|++++|.+. .+|.. ...+++|++|++++|.
T Consensus 283 ~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~ 358 (570)
T 2z63_A 283 NVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNG 358 (570)
T ss_dssp TCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSC
T ss_pred cccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCc
Confidence 5666666666655 244433332 3444444444333 12211 0345667777777777
Q ss_pred ceecC--CcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCC-cccccCCCCCcEEcCCCcCcccC
Q 039957 203 LNGTI--PTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIP-PCLASLTSLRELDLGSNKLTSSI 279 (481)
Q Consensus 203 l~~~~--p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~ 279 (481)
+++.. |..+..+++|+.|++++|.+.+..+. +..+++|+.|++++|.+.+..| ..+..+++|++|++++|.+++..
T Consensus 359 l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 437 (570)
T 2z63_A 359 LSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 437 (570)
T ss_dssp CBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECC
T ss_pred cCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccc
Confidence 66543 55566677777777777776664444 6667777777777777766554 45666777777777777777666
Q ss_pred CcchhccccCcEEEccCcccC-CCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 280 PSSLWSLGYILEINLSSNLLN-DSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 280 p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
|..+..++.|++|++++|.+. +.+|..+..+++|++|++++|++++..|..++.+++|++|+++++
T Consensus 438 ~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 438 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred hhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 767777777777777777765 456666777777777777777777666777777777777776654
No 15
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-39 Score=343.50 Aligned_cols=330 Identities=23% Similarity=0.250 Sum_probs=178.4
Q ss_pred cchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccc
Q 039957 7 TEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNAT 86 (481)
Q Consensus 7 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 86 (481)
..|+++++|++|+|++|+++++.|.+|.++++|++|+|++|+++ .+|...+..+++|++|+|++|++++..|..|.+++
T Consensus 43 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 121 (680)
T 1ziw_A 43 ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121 (680)
T ss_dssp GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCT
T ss_pred HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccC
Confidence 45677777777777777777777777777777777777777776 45543333677777777777777666666677777
Q ss_pred cCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeC--------
Q 039957 87 KLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGIL-------- 158 (481)
Q Consensus 87 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-------- 158 (481)
+|++|++++|.+++..|..|+++++|++|++++|.+++.++..+. ...+++|++|++++|.+++..
T Consensus 122 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 195 (680)
T 1ziw_A 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELD------IFANSSLKKLELSSNQIKEFSPGCFHAIG 195 (680)
T ss_dssp TCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHG------GGTTCEESEEECTTCCCCCBCTTGGGGSS
T ss_pred CCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhh------ccccccccEEECCCCcccccChhhhhhhh
Confidence 777777777777776666777777777777777776655332110 112234444444444444433
Q ss_pred -------------------------------------------Chhhhhcc-cCccEEEccCCceeecCCcccccCCCCC
Q 039957 159 -------------------------------------------PPSIGNFS-TSLQRFSASECKLKGTIPKEIGHLRGLI 194 (481)
Q Consensus 159 -------------------------------------------p~~~~~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 194 (481)
|..+..+. ++|++|++++|++++..|..|+.+++|+
T Consensus 196 ~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (680)
T 1ziw_A 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLE 275 (680)
T ss_dssp EECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCccccc
Confidence 33333321 1244444444444444444444444444
Q ss_pred eEecccccceecCCcCCcCCCCCCeeecCCCcCCC-----CCCc----cccCccCCCeeecCCCeeeecCCcccccCCCC
Q 039957 195 YLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQG-----YVPH----NLCHLEMLNLLHLGGNKLSGHIPPCLASLTSL 265 (481)
Q Consensus 195 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 265 (481)
+|++++|.+++..|..|..+++|+.+++++|...+ .+|. .|..+++|+.|++++|++++..|..|..+++|
T Consensus 276 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 355 (680)
T 1ziw_A 276 YFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINL 355 (680)
T ss_dssp EEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTC
T ss_pred EeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCC
Confidence 44444444444444444444444444444433221 1111 44555666666666666666666666666666
Q ss_pred CcEEcCCCcCcc--cCCcchhcc--ccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecc-ccccccCChhhh
Q 039957 266 RELDLGSNKLTS--SIPSSLWSL--GYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIP-STIGALVDLETI 340 (481)
Q Consensus 266 ~~L~ls~N~l~~--~~p~~~~~l--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l 340 (481)
++|++++|.+.. ..+..+..+ +.|+.|++++|++++..|..+..+++|+.|++++|++.+.+| ..+..+++|+++
T Consensus 356 ~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 435 (680)
T 1ziw_A 356 KYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 435 (680)
T ss_dssp CEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEE
T ss_pred cEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEE
Confidence 665555544221 111111111 234444444444444445555555555555555555554443 344555555555
Q ss_pred hcc
Q 039957 341 SLA 343 (481)
Q Consensus 341 ~~~ 343 (481)
+++
T Consensus 436 ~Ls 438 (680)
T 1ziw_A 436 YLS 438 (680)
T ss_dssp ECC
T ss_pred ecC
Confidence 443
No 16
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=337.37 Aligned_cols=324 Identities=24% Similarity=0.293 Sum_probs=221.9
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+. ++|++|+|++|+++++.|..|.++++|++|+|++|++++..|..+. .+++|++|+|++|+++ .+|..
T Consensus 45 ~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~-~lp~~-- 118 (562)
T 3a79_B 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFL-FNQDLEYLDVSHNRLQ-NISCC-- 118 (562)
T ss_dssp SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTT-TCTTCCEEECTTSCCC-EECSC--
T ss_pred cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhC-CCCCCCEEECCCCcCC-ccCcc--
Confidence 3676554 7899999999999888888899999999999999999865566665 7899999999999988 55555
Q ss_pred ccccCceeecccCcceec-CcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCcc--ceeCCh
Q 039957 84 NATKLIILDLGFNTFSGH-IPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPL--GGILPP 160 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l--~~~~p~ 160 (481)
.+++|++|+|++|++++. .|..|+++++|++|++++|+++... + ..+.++ +|++|++++|.+ ++..|.
T Consensus 119 ~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~---~-----~~l~~L-~L~~L~L~~n~l~~~~~~~~ 189 (562)
T 3a79_B 119 PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD---L-----LPVAHL-HLSCILLDLVSYHIKGGETE 189 (562)
T ss_dssp CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT---T-----GGGTTS-CEEEEEEEESSCCCCSSSCC
T ss_pred ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc---h-----hhhhhc-eeeEEEeecccccccccCcc
Confidence 788999999999998873 4688999999999999999887531 1 112222 336666666666 444443
Q ss_pred hhhhcc--------------------------------------------------------------------------
Q 039957 161 SIGNFS-------------------------------------------------------------------------- 166 (481)
Q Consensus 161 ~~~~~~-------------------------------------------------------------------------- 166 (481)
.+..+.
T Consensus 190 ~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~ 269 (562)
T 3a79_B 190 SLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKL 269 (562)
T ss_dssp EEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHH
T ss_pred cccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHH
Confidence 332210
Q ss_pred ------cCccEEEccCCceeecCCccc-----------------------------------------------------
Q 039957 167 ------TSLQRFSASECKLKGTIPKEI----------------------------------------------------- 187 (481)
Q Consensus 167 ------~~L~~L~l~~n~l~~~~p~~~----------------------------------------------------- 187 (481)
.+|++|++++|.++|.+|..+
T Consensus 270 ~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~ 349 (562)
T 3a79_B 270 FQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCP 349 (562)
T ss_dssp HHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCC
T ss_pred HHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCc
Confidence 156677777777776666554
Q ss_pred ccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCC--CccccCccCCCeeecCCCeeee-cCCcccccCCC
Q 039957 188 GHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYV--PHNLCHLEMLNLLHLGGNKLSG-HIPPCLASLTS 264 (481)
Q Consensus 188 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~ 264 (481)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++.. |..+..+++|+.|++++|++++ .++..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 45566677777777776666666777777777777777766532 3456666777777777777766 33334666677
Q ss_pred CCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhccc
Q 039957 265 LRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAG 344 (481)
Q Consensus 265 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g 344 (481)
|++|++++|++++.+|..+. +.|++|++++|+++ .+|..+..+++|++|++++|+++...+..+..+++|+.+++++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 77777777777665555443 56777777777776 4555555677777777777777743333366677777776665
Q ss_pred c
Q 039957 345 S 345 (481)
Q Consensus 345 ~ 345 (481)
+
T Consensus 507 N 507 (562)
T 3a79_B 507 N 507 (562)
T ss_dssp C
T ss_pred C
Confidence 5
No 17
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.6e-40 Score=330.27 Aligned_cols=320 Identities=20% Similarity=0.252 Sum_probs=278.2
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeec-chhccccccCceeec
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTI-PNSITNATKLIILDL 93 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L 93 (481)
-+.++.+++.++.+ |. + .++|++|+|++|++++..|..+. .+++|++|++++|.+.+.+ |..|.++++|++|+|
T Consensus 12 ~~~~~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 12 GYNAICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFS-RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp TTEEECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTS-SCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred ccccCcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhc-cCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 35688889988754 54 2 37899999999999976677775 8999999999999997555 678999999999999
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh-hhhcccCccEE
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS-IGNFSTSLQRF 172 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~~L~~L 172 (481)
++|.+++..|..|+++++|++|++++|++++..... ..+.++++|++|+|++|++++..|.. +..+ ++|++|
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l-~~L~~L 159 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG------NFFKPLTSLEMLVLRDNNIKKIQPASFFLNM-RRFHVL 159 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS------STTTTCTTCCEEECCSSBCCSCCCCGGGGGC-TTCCEE
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCc------ccccCcccCCEEECCCCccCccCcccccCCC-CcccEE
Confidence 999999999999999999999999999998631111 23678899999999999999988877 5565 689999
Q ss_pred EccCCceeecCCcccccC--CCCCeEecccccceecCCcC--------CcCCCCCCeeecCCCcCCCCCCccccC-----
Q 039957 173 SASECKLKGTIPKEIGHL--RGLIYLSLGFNDLNGTIPTS--------IGTLKQLQGFFLPETNLQGYVPHNLCH----- 237 (481)
Q Consensus 173 ~l~~n~l~~~~p~~~~~l--~~L~~L~l~~N~l~~~~p~~--------~~~l~~L~~l~l~~n~l~~~~p~~~~~----- 237 (481)
++++|.+++..|..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|++.+..|..+..
T Consensus 160 ~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~ 239 (455)
T 3v47_A 160 DLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGT 239 (455)
T ss_dssp ECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTC
T ss_pred eCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccccc
Confidence 999999999989888876 78999999999998655543 336688999999999987655543322
Q ss_pred ----------------------------------ccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcch
Q 039957 238 ----------------------------------LEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSL 283 (481)
Q Consensus 238 ----------------------------------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 283 (481)
.++|+.|++++|++++.+|..|..+++|++|++++|++++..|..+
T Consensus 240 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 319 (455)
T 3v47_A 240 KIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAF 319 (455)
T ss_dssp CEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHh
Confidence 2579999999999999999999999999999999999999999999
Q ss_pred hccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhccccc
Q 039957 284 WSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 284 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
..++.|++|++++|.+.+..|..+..+++|++|++++|++++..|..+..+++|++|+++++.
T Consensus 320 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 382 (455)
T 3v47_A 320 WGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQ 382 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred cCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCc
Confidence 999999999999999998889999999999999999999999999999999999999998764
No 18
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-38 Score=338.73 Aligned_cols=336 Identities=22% Similarity=0.222 Sum_probs=222.5
Q ss_pred eeccCcchhCCCC--CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcccee---
Q 039957 2 TGQIPTEIGNLQN--LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIG--- 76 (481)
Q Consensus 2 ~g~lp~~~~~l~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~--- 76 (481)
++..|..|..++. |++|+|++|++++..|..|..+++|++|++++|++++..|..+. .+++|++|++++|...+
T Consensus 235 ~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~~~~~~~~~ 313 (680)
T 1ziw_A 235 STTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH-GLFNVRYLNLKRSFTKQSIS 313 (680)
T ss_dssp CEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTT-TCTTCCEEECTTCBCCC---
T ss_pred cccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhc-CCCCccEEeccchhhhcccc
Confidence 3455667777654 88888888888887778888888888888888888766666554 67888888887765432
Q ss_pred --ecc----hhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCcc--ccCCCccccccccCCCCCCCcEEE
Q 039957 77 --TIP----NSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTT--ESSSAYQWSFLSSLTNCRYLVYLI 148 (481)
Q Consensus 77 --~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~~~~~~l~~l~~L~~L~ 148 (481)
.+| ..|..+++|++|++++|.+++..|..|.++++|++|++++|.++. ++...|. .+ ..+.|++|+
T Consensus 314 ~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~-----~~-~~~~L~~L~ 387 (680)
T 1ziw_A 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFV-----SL-AHSPLHILN 387 (680)
T ss_dssp ---CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTG-----GG-TTSCCCEEE
T ss_pred cccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhc-----cc-ccCcCceEE
Confidence 222 267788888888888888888888888888888888888886432 2222211 00 124566777
Q ss_pred ccCCccceeCChhhhhcccCccEEEccCCceeecCC-cccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcC
Q 039957 149 LSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIP-KEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNL 227 (481)
Q Consensus 149 Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l 227 (481)
+++|++++..|..+..+ ++|+.|++++|.+++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.+
T Consensus 388 L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l 466 (680)
T 1ziw_A 388 LTKNKISKIESDAFSWL-GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVAL 466 (680)
T ss_dssp CTTSCCCEECTTTTTTC-TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCCCCeEChhhhhCC-CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccc
Confidence 77777776666666655 467777777777766554 4566677777777777777666666666666666666666665
Q ss_pred C--CCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCC--------cchhccccCcEEEccCc
Q 039957 228 Q--GYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIP--------SSLWSLGYILEINLSSN 297 (481)
Q Consensus 228 ~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p--------~~~~~l~~L~~L~l~~N 297 (481)
. +..|..|..+++|+.|++++|++++.+|..|..+++|++|++++|++++..+ ..+..++.|++|++++|
T Consensus 467 ~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N 546 (680)
T 1ziw_A 467 KNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESN 546 (680)
T ss_dssp BCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSS
T ss_pred cccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCC
Confidence 5 4456666666666666666666666666666666666666666666654311 22555666666666666
Q ss_pred ccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 298 LLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 298 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
+++...+..|.++++|+.|++++|++++..+..|..+++|+.|+++++
T Consensus 547 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 547 GFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 666444445666666666666666666555555666666666665554
No 19
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=350.66 Aligned_cols=271 Identities=21% Similarity=0.218 Sum_probs=157.7
Q ss_pred cCcchhCCCCCCeeeCcCCccc-ccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchh--
Q 039957 5 IPTEIGNLQNLKSLFLGANNLS-GLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNS-- 81 (481)
Q Consensus 5 lp~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~-- 81 (481)
.|..|.++++|++|+|++|... .+.|.+|.++++|++|+|++|++++..|..+. .+++|++|+|++|.+++.+|..
T Consensus 40 ~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~ 118 (844)
T 3j0a_A 40 TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ-GLFHLFELRLYFCGLSDAVLKDGY 118 (844)
T ss_dssp CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC-SCSSCCCEECTTCCCSSCCSTTCC
T ss_pred ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc-CCcccCEeeCcCCCCCcccccCcc
Confidence 3455556666666666665333 22355566666666666666666544454443 5566666666666655544433
Q ss_pred ccccccCceeecccCcceecCc-ccccCCCCCCEEEcccccCccccCCCccc------------------cccccCCCCC
Q 039957 82 ITNATKLIILDLGFNTFSGHIP-NTFGNLRHLSVLSLLMNNLTTESSSAYQW------------------SFLSSLTNCR 142 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------------------~~~~~l~~l~ 142 (481)
|.++++|++|+|++|.+++..+ ..|+++++|++|++++|.+++..+..+.. ..+..+..++
T Consensus 119 ~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~ 198 (844)
T 3j0a_A 119 FRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCM 198 (844)
T ss_dssp CSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSS
T ss_pred ccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcC
Confidence 5566666666666666655433 34566666666666666555442221110 0001112222
Q ss_pred ------CCcEEEccCCccceeCChhhhhc-------------------------------------ccCccEEEccCCce
Q 039957 143 ------YLVYLILSGNPLGGILPPSIGNF-------------------------------------STSLQRFSASECKL 179 (481)
Q Consensus 143 ------~L~~L~Ls~N~l~~~~p~~~~~~-------------------------------------~~~L~~L~l~~n~l 179 (481)
.|++|++++|.+++..|..+... .++|+.|++++|.+
T Consensus 199 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l 278 (844)
T 3j0a_A 199 NPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFV 278 (844)
T ss_dssp CTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCC
T ss_pred CccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcc
Confidence 26666666666554444333221 13566777777777
Q ss_pred eecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCccc
Q 039957 180 KGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCL 259 (481)
Q Consensus 180 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 259 (481)
.+..|..|..+++|+.|++++|++++..|..|..+++|+.|++++|.+++..|..|..+++|+.|++++|++.+..+..|
T Consensus 279 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~ 358 (844)
T 3j0a_A 279 FSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTF 358 (844)
T ss_dssp CEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCS
T ss_pred cccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhh
Confidence 66666667777777777777777776666677777777777777777776666677777777777777777766666666
Q ss_pred ccCCCCCcEEcCCCcCc
Q 039957 260 ASLTSLRELDLGSNKLT 276 (481)
Q Consensus 260 ~~l~~L~~L~ls~N~l~ 276 (481)
..+++|++|++++|.++
T Consensus 359 ~~l~~L~~L~Ls~N~l~ 375 (844)
T 3j0a_A 359 KFLEKLQTLDLRDNALT 375 (844)
T ss_dssp CSCCCCCEEEEETCCSC
T ss_pred cCCCCCCEEECCCCCCC
Confidence 66666666666666654
No 20
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=325.27 Aligned_cols=319 Identities=24% Similarity=0.249 Sum_probs=289.0
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
-+.++.++++++. +|..+ .+++++|+|++|++++..|..+. .+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFVA-VPEGI--PTETRLLDLGKNRIKTLNQDEFA-SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCSS-CCSCC--CTTCSEEECCSSCCCEECTTTTT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-CCCCC--CCCCcEEECCCCccceECHhHcc-CCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 4678999999985 45544 36899999999999965566665 89999999999999999999999999999999999
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEc
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSA 174 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l 174 (481)
+|.+++..+..|.++++|++|+|++|+++++.+ ..+.++++|++|+|++|.+++..|..|..+ ++|++|++
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~--------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l 159 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLD--------YMFQDLYNLKSLEVGDNDLVYISHRAFSGL-NSLEQLTL 159 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECT--------TTTTTCTTCCEEEECCTTCCEECTTSSTTC-TTCCEEEE
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCCh--------hHccccccCCEEECCCCccceeChhhccCC-CCCCEEEC
Confidence 999998888889999999999999999998744 346788999999999999999988888887 68999999
Q ss_pred cCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeec
Q 039957 175 SECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGH 254 (481)
Q Consensus 175 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 254 (481)
++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|...+.+|.......+|+.|++++|++++.
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAV 239 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccccc
Confidence 99999977667799999999999999999999899999999999999999998888887777777999999999999976
Q ss_pred CCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecccccccc
Q 039957 255 IPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGAL 334 (481)
Q Consensus 255 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 334 (481)
.+..|..+++|+.|++++|++++..+..+..++.|++|++++|++++..|..|..+++|+.|++++|++++..+..|..+
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 319 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCG
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCC
Confidence 66789999999999999999999889999999999999999999999999999999999999999999998888889999
Q ss_pred CChhhhhccccc
Q 039957 335 VDLETISLAGSF 346 (481)
Q Consensus 335 ~~L~~l~~~g~~ 346 (481)
++|+.|+++++.
T Consensus 320 ~~L~~L~l~~N~ 331 (477)
T 2id5_A 320 GNLETLILDSNP 331 (477)
T ss_dssp GGCCEEECCSSC
T ss_pred cccCEEEccCCC
Confidence 999999988764
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.5e-39 Score=332.50 Aligned_cols=148 Identities=22% Similarity=0.281 Sum_probs=81.1
Q ss_pred ccCCCCCeEecccccceecCC---cCCcCCCCCCeeecCCCcCCCCCC--ccccCccCCCeeecCCCeeeecCCcccccC
Q 039957 188 GHLRGLIYLSLGFNDLNGTIP---TSIGTLKQLQGFFLPETNLQGYVP--HNLCHLEMLNLLHLGGNKLSGHIPPCLASL 262 (481)
Q Consensus 188 ~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~l~l~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 262 (481)
..+++|++|++++|++++.+| ..++.+++|+.|++++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+
T Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 409 (549)
T 2z81_A 331 QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWP 409 (549)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCC
T ss_pred hcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccc
Confidence 356667777777777665543 335666667777777776665432 34666667777777777766 355666666
Q ss_pred CCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhc
Q 039957 263 TSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISL 342 (481)
Q Consensus 263 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~ 342 (481)
++|++|++++|+++. +|..+. +.|++|++++|++++.+ ..+++|++|++++|+++ .+|. ...+++|++|++
T Consensus 410 ~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~L 480 (549)
T 2z81_A 410 EKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKI 480 (549)
T ss_dssp TTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEEC
T ss_pred ccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEec
Confidence 666666666666653 222211 23344444444433321 23455555555555555 3333 234555555555
Q ss_pred ccc
Q 039957 343 AGS 345 (481)
Q Consensus 343 ~g~ 345 (481)
+++
T Consensus 481 s~N 483 (549)
T 2z81_A 481 SRN 483 (549)
T ss_dssp CSS
T ss_pred CCC
Confidence 443
No 22
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=345.94 Aligned_cols=312 Identities=21% Similarity=0.243 Sum_probs=269.4
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.||. -.++|++|||++|+|+++.|..|.++++|++|+|++|.+.+.+++..+..+++|++|+|++|.+++..|.+|.
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 4676 4578999999999999999999999999999999999777788554445899999999999999999999999
Q ss_pred ccccCceeecccCcceecCccc--ccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh
Q 039957 84 NATKLIILDLGFNTFSGHIPNT--FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS 161 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 161 (481)
++++|++|+|++|.+++..|.. |+++++|++|+|++|.+++.... ..+.++++|++|+|++|.+++..|..
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~-------~~~~~L~~L~~L~Ls~N~i~~~~~~~ 167 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH-------PSFGKLNSLKSIDFSSNQIFLVCEHE 167 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCC-------GGGGTCSSCCEEEEESSCCCCCCSGG
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccc-------hhHhhCCCCCEEECCCCcCCeeCHHH
Confidence 9999999999999999877665 99999999999999999876321 34678999999999999999998888
Q ss_pred hhhcc-cCccEEEccCCceeecCCcccccCCC------CCeEecccccceecCCcCCcC---------------------
Q 039957 162 IGNFS-TSLQRFSASECKLKGTIPKEIGHLRG------LIYLSLGFNDLNGTIPTSIGT--------------------- 213 (481)
Q Consensus 162 ~~~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~------L~~L~l~~N~l~~~~p~~~~~--------------------- 213 (481)
+..+. ++|+.|+++.|.+.+..|..++.+.+ |++|++++|.+++..|..+..
T Consensus 168 l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~ 247 (844)
T 3j0a_A 168 LEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGF 247 (844)
T ss_dssp GHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSS
T ss_pred cccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccc
Confidence 87652 47999999999999888887777665 899999999877655544322
Q ss_pred -----------------CCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCc
Q 039957 214 -----------------LKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 214 -----------------l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
.++|+.|++++|.+.+..|..|..+++|+.|++++|++++..|..|..+++|++|++++|+++
T Consensus 248 ~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 327 (844)
T 3j0a_A 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327 (844)
T ss_dssp SCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCS
T ss_pred cccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCC
Confidence 257888999999988888888888999999999999998888888989999999999999998
Q ss_pred ccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeee
Q 039957 277 SSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSG 325 (481)
Q Consensus 277 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 325 (481)
+..|..+..++.|+.|++++|.+.+..+..|..+++|++|++++|.+++
T Consensus 328 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 328 ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred ccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 8888888889999999999999988777788888999999999998874
No 23
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=332.11 Aligned_cols=330 Identities=18% Similarity=0.154 Sum_probs=269.8
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
++|..+. +++++|+|++|+++++.+.+|.++++|++|+|++|++++..|..+ ..+++|++|+|++|++++..|.+|.
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY-QSLSHLSTLILTGNPIQSLALGAFS 97 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTT-TTCTTCCEEECTTCCCCEECTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccc-cCchhCCEEeCcCCcCCccCHhhhc
Confidence 4676553 579999999999999999999999999999999999985445555 4899999999999999988889999
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
++++|++|++++|.+++..+..|+++++|++|++++|.++++. .+..+.++++|++|++++|++++..|..+.
T Consensus 98 ~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~-------lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 170 (570)
T 2z63_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK-------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (570)
T ss_dssp TCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCC-------CCGGGGGCTTCCEEECTTSCCCEECGGGGH
T ss_pred CccccccccccccccccCCCccccccccccEEecCCCccceec-------ChhhhcccCCCCEEeCcCCccceecHHHcc
Confidence 9999999999999999877778999999999999999998742 124467788888888888888876666555
Q ss_pred hcccCc----cEEEccCCceeecC--------------------------------------------------------
Q 039957 164 NFSTSL----QRFSASECKLKGTI-------------------------------------------------------- 183 (481)
Q Consensus 164 ~~~~~L----~~L~l~~n~l~~~~-------------------------------------------------------- 183 (481)
.+ .+| +.+++++|.+++..
T Consensus 171 ~l-~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 249 (570)
T 2z63_A 171 VL-HQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 249 (570)
T ss_dssp HH-HTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTT
T ss_pred ch-hccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchh
Confidence 44 234 45555555443322
Q ss_pred -------------------------CcccccCCCCCeEecccccceecCCcCC---------------------------
Q 039957 184 -------------------------PKEIGHLRGLIYLSLGFNDLNGTIPTSI--------------------------- 211 (481)
Q Consensus 184 -------------------------p~~~~~l~~L~~L~l~~N~l~~~~p~~~--------------------------- 211 (481)
|..+..+++|+.|++++|.++ .+|..+
T Consensus 250 ~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~ 328 (570)
T 2z63_A 250 ALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLK 328 (570)
T ss_dssp TTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCC
T ss_pred hhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccC
Confidence 233344455566666555554 233222
Q ss_pred ---------------cCCCCCCeeecCCCcCCCCC--CccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCc
Q 039957 212 ---------------GTLKQLQGFFLPETNLQGYV--PHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNK 274 (481)
Q Consensus 212 ---------------~~l~~L~~l~l~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 274 (481)
..+++|+.|++++|++++.. |..+..+++|+.|++++|.+++..+. +..+++|+.|++++|.
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~ 407 (570)
T 2z63_A 329 RLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSN 407 (570)
T ss_dssp EEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSE
T ss_pred EEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCc
Confidence 45678999999999998754 67888999999999999999976655 9999999999999999
Q ss_pred CcccCC-cchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeee-eeccccccccCChhhhhccccc
Q 039957 275 LTSSIP-SSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLS-GDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 275 l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
+.+..| ..+..++.|++|++++|.+.+..|..+..+++|++|++++|++. +.+|..+..+++|++|+++++.
T Consensus 408 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~ 481 (570)
T 2z63_A 408 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 481 (570)
T ss_dssp EESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred cccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCc
Confidence 998776 57889999999999999999999999999999999999999998 6789999999999999998763
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=327.64 Aligned_cols=331 Identities=23% Similarity=0.255 Sum_probs=269.6
Q ss_pred eccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcccee-ecchh
Q 039957 3 GQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIG-TIPNS 81 (481)
Q Consensus 3 g~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~p~~ 81 (481)
+..|..|.++++|++|+|++|+++++.|..|.++++|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..
T Consensus 35 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~ 110 (520)
T 2z7x_B 35 ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLDLSFNAFDALPICKE 110 (520)
T ss_dssp CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEECCSSCCSSCCCCGG
T ss_pred ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEeccCCccccccchhh
Confidence 344578999999999999999999999999999999999999999998 78876 69999999999999987 47899
Q ss_pred ccccccCceeecccCcceecCcccccCCCCC--CEEEcccccC--ccccCCCccccc-----------------------
Q 039957 82 ITNATKLIILDLGFNTFSGHIPNTFGNLRHL--SVLSLLMNNL--TTESSSAYQWSF----------------------- 134 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~~~----------------------- 134 (481)
|+++++|++|++++|.+++ ..|..+++| ++|++++|.+ ++..+..+....
T Consensus 111 ~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~ 187 (520)
T 2z7x_B 111 FGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVK 187 (520)
T ss_dssp GGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCT
T ss_pred hccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhh
Confidence 9999999999999999986 467888888 9999999988 333222211100
Q ss_pred -------------------------cccCCC---------------------------CCCCcEEEccCCccceeCChhh
Q 039957 135 -------------------------LSSLTN---------------------------CRYLVYLILSGNPLGGILPPSI 162 (481)
Q Consensus 135 -------------------------~~~l~~---------------------------l~~L~~L~Ls~N~l~~~~p~~~ 162 (481)
++.+.. .++|++|++++|+++|.+|..+
T Consensus 188 ~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~ 267 (520)
T 2z7x_B 188 TVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRD 267 (520)
T ss_dssp TCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCC
T ss_pred cccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccch
Confidence 000011 1267888888888887777766
Q ss_pred -----hhcccC--------------------------ccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCC
Q 039957 163 -----GNFSTS--------------------------LQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSI 211 (481)
Q Consensus 163 -----~~~~~~--------------------------L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 211 (481)
..+ +. ++.|++++|.+.... .+..+++|++|++++|++++.+|..+
T Consensus 268 ~~~~~~~l-~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~ 344 (520)
T 2z7x_B 268 FDYSGTSL-KALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENC 344 (520)
T ss_dssp CCCCSCCC-CEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred hhcccccC-ceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhh
Confidence 333 33 455555555443211 12678999999999999999899999
Q ss_pred cCCCCCCeeecCCCcCCC--CCCccccCccCCCeeecCCCeeeecCC-cccccCCCCCcEEcCCCcCcccCCcchhcccc
Q 039957 212 GTLKQLQGFFLPETNLQG--YVPHNLCHLEMLNLLHLGGNKLSGHIP-PCLASLTSLRELDLGSNKLTSSIPSSLWSLGY 288 (481)
Q Consensus 212 ~~l~~L~~l~l~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 288 (481)
+.+++|+.|++++|++++ ..|..+..+++|+.|++++|++++.+| ..+..+++|++|++++|++++..|..+. +.
T Consensus 345 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~ 422 (520)
T 2z7x_B 345 GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PR 422 (520)
T ss_dssp CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TT
T ss_pred ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--cc
Confidence 999999999999999997 556789999999999999999998444 4588999999999999999988877664 78
Q ss_pred CcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhccccc
Q 039957 289 ILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 289 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
|+.|++++|+++ .+|..+..+++|++|++++|+++...+..+..+++|++++++++.
T Consensus 423 L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 423 IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 999999999998 678888899999999999999995444458999999999998774
No 25
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.2e-38 Score=326.56 Aligned_cols=316 Identities=21% Similarity=0.240 Sum_probs=262.7
Q ss_pred eccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceee-cchh
Q 039957 3 GQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGT-IPNS 81 (481)
Q Consensus 3 g~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~-~p~~ 81 (481)
+..|.+|.++++|++|+|++|+++++.|++|.++++|++|+|++|+++ .+|.. .+++|++|+|++|++++. +|..
T Consensus 66 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~ 141 (562)
T 3a79_B 66 ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKE 141 (562)
T ss_dssp CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGG
T ss_pred ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc---ccccCCEEECCCCCccccCchHh
Confidence 334578999999999999999999999999999999999999999998 78876 699999999999999873 4689
Q ss_pred ccccccCceeecccCcceecCcccccCCCCC--CEEEcccccC--ccccCCCccccc-----------------c-ccCC
Q 039957 82 ITNATKLIILDLGFNTFSGHIPNTFGNLRHL--SVLSLLMNNL--TTESSSAYQWSF-----------------L-SSLT 139 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~~~-----------------~-~~l~ 139 (481)
|.++++|++|++++|.+++ ..|..+++| ++|++++|.+ ++..+..+.... + ..+.
T Consensus 142 ~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~ 218 (562)
T 3a79_B 142 FGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVN 218 (562)
T ss_dssp GGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEES
T ss_pred hcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhccc
Confidence 9999999999999999986 346666666 9999999988 554332221100 0 0000
Q ss_pred -------------------------------------------------------CCCCCcEEEccCCccceeCChhhh-
Q 039957 140 -------------------------------------------------------NCRYLVYLILSGNPLGGILPPSIG- 163 (481)
Q Consensus 140 -------------------------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~- 163 (481)
..++|++|++++|.++|.+|..+.
T Consensus 219 ~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~ 298 (562)
T 3a79_B 219 ALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFT 298 (562)
T ss_dssp SEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCC
T ss_pred ccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhh
Confidence 012678888888888877776541
Q ss_pred ---------------------------------------------------hcccCccEEEccCCceeecCCcccccCCC
Q 039957 164 ---------------------------------------------------NFSTSLQRFSASECKLKGTIPKEIGHLRG 192 (481)
Q Consensus 164 ---------------------------------------------------~~~~~L~~L~l~~n~l~~~~p~~~~~l~~ 192 (481)
...++|++|++++|++++.+|..+.++++
T Consensus 299 ~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 378 (562)
T 3a79_B 299 YSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKR 378 (562)
T ss_dssp CCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSS
T ss_pred cccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCC
Confidence 12368999999999999989999999999
Q ss_pred CCeEeccccccee--cCCcCCcCCCCCCeeecCCCcCCCCCC-ccccCccCCCeeecCCCeeeecCCcccccCCCCCcEE
Q 039957 193 LIYLSLGFNDLNG--TIPTSIGTLKQLQGFFLPETNLQGYVP-HNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELD 269 (481)
Q Consensus 193 L~~L~l~~N~l~~--~~p~~~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 269 (481)
|++|++++|++++ .+|..+..+++|+.|++++|++++.+| ..+..+++|+.|++++|++++..|..+. ++|+.|+
T Consensus 379 L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~ 456 (562)
T 3a79_B 379 LQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLD 456 (562)
T ss_dssp CCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEE
T ss_pred CCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEE
Confidence 9999999999987 345789999999999999999998444 5688999999999999999987776654 7999999
Q ss_pred cCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecc
Q 039957 270 LGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIP 328 (481)
Q Consensus 270 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 328 (481)
+++|+++ .+|..+..++.|++|++++|+++...+..+..+++|+.|++++|++.+..+
T Consensus 457 L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 457 LHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 9999998 677777799999999999999996444448999999999999999998655
No 26
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.6e-37 Score=323.41 Aligned_cols=339 Identities=19% Similarity=0.188 Sum_probs=234.1
Q ss_pred CcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcccc
Q 039957 6 PTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNA 85 (481)
Q Consensus 6 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 85 (481)
|.+|.++++|++|||++|+|+++.|.+|.++++|++|+|++|+|+ .+|...+..+++|++|+|++|++++..+..|+++
T Consensus 69 ~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L 147 (635)
T 4g8a_A 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 147 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTC
T ss_pred HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcC
Confidence 356888888888888888888887888888888888888888887 5665554578888888888888887766778888
Q ss_pred ccCceeecccCcceec-CcccccCCCCCCEEEcccccCccccCCCcccc-------------------c-----------
Q 039957 86 TKLIILDLGFNTFSGH-IPNTFGNLRHLSVLSLLMNNLTTESSSAYQWS-------------------F----------- 134 (481)
Q Consensus 86 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-------------------~----------- 134 (481)
++|++|+|++|.+++. .|..++.+++|++|++++|+++++.+..+... .
T Consensus 148 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~ 227 (635)
T 4g8a_A 148 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLH 227 (635)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEE
T ss_pred cccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhh
Confidence 8888888888888753 57778888888888888887766532211000 0
Q ss_pred --------------------------------------------------------------------------------
Q 039957 135 -------------------------------------------------------------------------------- 134 (481)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (481)
T Consensus 228 ~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (635)
T 4g8a_A 228 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTN 307 (635)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTT
T ss_pred hhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcc
Confidence
Q ss_pred -------------cccCCCCCCCcEEEccCCccceeCChhh-------------------hhcccCccEEEccCCceee-
Q 039957 135 -------------LSSLTNCRYLVYLILSGNPLGGILPPSI-------------------GNFSTSLQRFSASECKLKG- 181 (481)
Q Consensus 135 -------------~~~l~~l~~L~~L~Ls~N~l~~~~p~~~-------------------~~~~~~L~~L~l~~n~l~~- 181 (481)
...+.....|+.|++++|.+.+..+..+ .. .++|+.++++.|.+..
T Consensus 308 l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~-l~~L~~L~ls~n~l~~~ 386 (635)
T 4g8a_A 308 VSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD-LPSLEFLDLSRNGLSFK 386 (635)
T ss_dssp CSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCB-CTTCCEEECCSSCCBEE
T ss_pred cccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccc-ccccccchhhccccccc
Confidence 0000111234444454444432221111 11 1456777777776642
Q ss_pred -cCCc-----------------------ccccCCCCCeEecccccceecCC-cCCcCCCCCCeeecCCCcCCCCCCcccc
Q 039957 182 -TIPK-----------------------EIGHLRGLIYLSLGFNDLNGTIP-TSIGTLKQLQGFFLPETNLQGYVPHNLC 236 (481)
Q Consensus 182 -~~p~-----------------------~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~~~ 236 (481)
..+. .+..+++|+.++++.|......+ ..|..+++++.++++.|.+.+..+..+.
T Consensus 387 ~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 387 GCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp EECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred cccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 2333 34445555555555555443333 3456677777777778877777777777
Q ss_pred CccCCCeeecCCCeee-ecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcE
Q 039957 237 HLEMLNLLHLGGNKLS-GHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRV 315 (481)
Q Consensus 237 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 315 (481)
.++.++.|++++|.+. +.+|..|..+++|++|++++|++++..|..|.++++|++|++++|++++..|..|..+++|++
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 8888888888888643 456777888888888888888888878888888888888888888888777777888888888
Q ss_pred EEccCCeeeeecccccccc-CChhhhhccccc
Q 039957 316 LDLSRNQLSGDIPSTIGAL-VDLETISLAGSF 346 (481)
Q Consensus 316 L~l~~N~l~~~~p~~~~~l-~~L~~l~~~g~~ 346 (481)
||+++|++++..|..+..+ .+|++|+++++.
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 8888888888878877776 577777777653
No 27
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.1e-37 Score=320.68 Aligned_cols=332 Identities=23% Similarity=0.272 Sum_probs=232.8
Q ss_pred eccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcccee-ecchh
Q 039957 3 GQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIG-TIPNS 81 (481)
Q Consensus 3 g~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~p~~ 81 (481)
+..|.+|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..+. .+++|++|++++|++++ ..|..
T Consensus 40 ~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~ 118 (549)
T 2z81_A 40 YIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFG-PLSSLKYLNLMGNPYQTLGVTSL 118 (549)
T ss_dssp EECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHT-TCTTCCEEECTTCCCSSSCSSCS
T ss_pred ccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhc-cCCCCcEEECCCCcccccchhhh
Confidence 33455667777777777777777766666777777777777777777643333343 56777777777776664 23455
Q ss_pred ccccccCceeecccCc-ceecCcccccCCCCCCEEEcccccCccccCCCcccc-c--------------cc-cCCCCCC-
Q 039957 82 ITNATKLIILDLGFNT-FSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWS-F--------------LS-SLTNCRY- 143 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~--------------~~-~l~~l~~- 143 (481)
+.++++|++|++++|. +....+..|+++++|++|++++|++++..+..+... . +. .+..+++
T Consensus 119 ~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 198 (549)
T 2z81_A 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSV 198 (549)
T ss_dssp CTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTB
T ss_pred hhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccc
Confidence 6666666666666665 333333455555556666655555554322111000 0 00 0011233
Q ss_pred --------------------------------------------------------------------------------
Q 039957 144 -------------------------------------------------------------------------------- 143 (481)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (481)
T Consensus 199 ~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~ 278 (549)
T 2z81_A 199 RYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVS 278 (549)
T ss_dssp SEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCC
T ss_pred cEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhh
Confidence
Q ss_pred ---------------------------------CcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCc---cc
Q 039957 144 ---------------------------------LVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPK---EI 187 (481)
Q Consensus 144 ---------------------------------L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~---~~ 187 (481)
|++|++++|.++ .+|..++...++|++|++++|++++.+|. .+
T Consensus 279 ~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 357 (549)
T 2z81_A 279 ELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACK 357 (549)
T ss_dssp CCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCT
T ss_pred hhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhh
Confidence 333444444433 24545533236899999999999987653 47
Q ss_pred ccCCCCCeEecccccceecCC--cCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCC
Q 039957 188 GHLRGLIYLSLGFNDLNGTIP--TSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSL 265 (481)
Q Consensus 188 ~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 265 (481)
+.+++|++|++++|++++..+ ..+..+++|+.|++++|+++. +|..+..+++|+.|++++|++++ +|..+. ++|
T Consensus 358 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L 433 (549)
T 2z81_A 358 GAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTL 433 (549)
T ss_dssp TSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTC
T ss_pred hccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCccc-ccchhc--CCc
Confidence 889999999999999986543 458899999999999999994 78888999999999999999985 444432 689
Q ss_pred CcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 266 RELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 266 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
++|++++|++++.+ ..++.|++|++++|+++ .+|. ...+++|++|++++|++++..|..+..+++|+.++++++
T Consensus 434 ~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 507 (549)
T 2z81_A 434 EVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507 (549)
T ss_dssp SEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSS
T ss_pred eEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCC
Confidence 99999999998753 47889999999999998 5666 467999999999999999998999999999999999877
Q ss_pred c
Q 039957 346 F 346 (481)
Q Consensus 346 ~ 346 (481)
.
T Consensus 508 ~ 508 (549)
T 2z81_A 508 P 508 (549)
T ss_dssp C
T ss_pred C
Confidence 5
No 28
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-36 Score=319.29 Aligned_cols=333 Identities=20% Similarity=0.202 Sum_probs=268.5
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
+||..+. +++++|||++|+|+++.|.+|.++++|++|+|++|+|+ .+|+..+..+++|++|+|++|+|++..+.+|.
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 4665543 47999999999999999999999999999999999998 56655555899999999999999988888999
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
++++|++|+|++|+++++.+..|+++++|++|++++|.++.+.. +..+..+++|++|+|++|++++..|..+.
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~-------~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL-------PEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCC-------CGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCC-------chhhccchhhhhhcccCcccccccccccc
Confidence 99999999999999999888899999999999999999987632 13456788899999999988776554432
Q ss_pred hcc-----------------------------------------------------------------------------
Q 039957 164 NFS----------------------------------------------------------------------------- 166 (481)
Q Consensus 164 ~~~----------------------------------------------------------------------------- 166 (481)
.+.
T Consensus 195 ~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 274 (635)
T 4g8a_A 195 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 274 (635)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTT
T ss_pred chhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccc
Confidence 210
Q ss_pred -----------------------------------------------------cCccEEEccCCceeecCCc--------
Q 039957 167 -----------------------------------------------------TSLQRFSASECKLKGTIPK-------- 185 (481)
Q Consensus 167 -----------------------------------------------------~~L~~L~l~~n~l~~~~p~-------- 185 (481)
..++.|++.+|.+.+..+.
T Consensus 275 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l 354 (635)
T 4g8a_A 275 LEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL 354 (635)
T ss_dssp TGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEE
T ss_pred cccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhc
Confidence 0122333333333221111
Q ss_pred -----------ccccCCCCCeEecccccceec-------------------------CCcCCcCCCCCCeeecCCCcCCC
Q 039957 186 -----------EIGHLRGLIYLSLGFNDLNGT-------------------------IPTSIGTLKQLQGFFLPETNLQG 229 (481)
Q Consensus 186 -----------~~~~l~~L~~L~l~~N~l~~~-------------------------~p~~~~~l~~L~~l~l~~n~l~~ 229 (481)
....+++|+++++++|.+... .+..+..+++|+.++++.++...
T Consensus 355 ~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 355 TFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp EEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEES
T ss_pred ccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccc
Confidence 112356777888888776421 23445667777777877776655
Q ss_pred CCC-ccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcC-cccCCcchhccccCcEEEccCcccCCCCCCcc
Q 039957 230 YVP-HNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKL-TSSIPSSLWSLGYILEINLSSNLLNDSLPSNV 307 (481)
Q Consensus 230 ~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l-~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 307 (481)
..+ ..|..+..++.++++.|.+.+..|..+..+++++.|++++|++ .+..|..+..++.|++|++++|++++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 444 4678899999999999999999999999999999999999985 45678899999999999999999999999999
Q ss_pred ccCCcCcEEEccCCeeeeeccccccccCChhhhhccccc
Q 039957 308 QKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 308 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
.++++|++|+|++|+|++..|..|..+++|++|+++++.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 553 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSC
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCc
Confidence 999999999999999999999999999999999998764
No 29
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-36 Score=300.61 Aligned_cols=306 Identities=21% Similarity=0.166 Sum_probs=164.6
Q ss_pred CCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCcee
Q 039957 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIIL 91 (481)
Q Consensus 12 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 91 (481)
++++++|++++|.++.+.+..|..+++|++|++++|++++..+..+. .+++|++|+|++|++++..|..|..+++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhcc-CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 45566666666666655555556666666666666666533333332 56666666666666665555556666666666
Q ss_pred ecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccE
Q 039957 92 DLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQR 171 (481)
Q Consensus 92 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~ 171 (481)
++++|.++...+..|+++++|++|++++|.++++++ ..+.++++|++|++++|++++.. +..+ ++|+.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~--------~~~~~l~~L~~L~l~~n~l~~~~---~~~l-~~L~~ 190 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED--------DTFQATTSLQNLQLSSNRLTHVD---LSLI-PSLFH 190 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT--------TTTSSCTTCCEEECCSSCCSBCC---GGGC-TTCSE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccCh--------hhccCCCCCCEEECCCCcCCccc---cccc-cccce
Confidence 666666664444445666666666666666655432 22445556666666666665431 2222 34556
Q ss_pred EEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCee
Q 039957 172 FSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKL 251 (481)
Q Consensus 172 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 251 (481)
+++++|.+++. ....+|++|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+
T Consensus 191 L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l 260 (390)
T 3o6n_A 191 ANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNEL 260 (390)
T ss_dssp EECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred eeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcC
Confidence 66666555431 2223455555555555533 211 124555555555555542 3455555555555555555
Q ss_pred eecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccc
Q 039957 252 SGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTI 331 (481)
Q Consensus 252 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 331 (481)
++..|..|..+++|+.|++++|++++ +|..+..++.|++|++++|++. .+|..+..+++|+.|++++|+++.. | +
T Consensus 261 ~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~ 335 (390)
T 3o6n_A 261 EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--L 335 (390)
T ss_dssp CEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--C
T ss_pred CCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--c
Confidence 55555555555555555555555553 3334444555555555555554 2344455555555555555555432 1 3
Q ss_pred cccCChhhhhcccc
Q 039957 332 GALVDLETISLAGS 345 (481)
Q Consensus 332 ~~l~~L~~l~~~g~ 345 (481)
..+++|+.|+++++
T Consensus 336 ~~~~~L~~L~l~~N 349 (390)
T 3o6n_A 336 STHHTLKNLTLSHN 349 (390)
T ss_dssp CTTCCCSEEECCSS
T ss_pred hhhccCCEEEcCCC
Confidence 44455555555443
No 30
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.1e-37 Score=293.78 Aligned_cols=253 Identities=29% Similarity=0.456 Sum_probs=166.0
Q ss_pred cCCCEEEeeCCcCcc--ccChhhhcCCCCccEEEccC-ccceeecchhccccccCceeecccCcceecCcccccCCCCCC
Q 039957 37 STIRNLNLGGNRLSG--HLPSMIGHSLPNIKYLELGD-NNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLS 113 (481)
Q Consensus 37 ~~L~~L~L~~N~l~~--~~p~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 113 (481)
.++++|+|++|.++| .+|..+. .+++|++|++++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|+++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~-~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLA-NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGG-GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHh-CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 356666666666665 5666554 466666666663 666666666666666666666666666666666666666666
Q ss_pred EEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCC
Q 039957 114 VLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGL 193 (481)
Q Consensus 114 ~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L 193 (481)
+|++++|.+++..+ ..+..+++|++|+|++|++++.+|..++.+.+.|++|++++|++++.+|..+..++ |
T Consensus 129 ~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L 199 (313)
T 1ogq_A 129 TLDFSYNALSGTLP--------PSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-L 199 (313)
T ss_dssp EEECCSSEEESCCC--------GGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-C
T ss_pred EEeCCCCccCCcCC--------hHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-c
Confidence 66666666664321 23445666666666666666666666666544666777777777666666666665 7
Q ss_pred CeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCC
Q 039957 194 IYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSN 273 (481)
Q Consensus 194 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 273 (481)
++|++++|.+++.+|..+..+++|+.|++++|.+++.+|. +..+++|+.|++++|++++.+|..|..+++|++|++++|
T Consensus 200 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 7777777777666666666777777777777776655544 566677777777777777777777777777777777777
Q ss_pred cCcccCCcchhccccCcEEEccCcc-cCC
Q 039957 274 KLTSSIPSSLWSLGYILEINLSSNL-LND 301 (481)
Q Consensus 274 ~l~~~~p~~~~~l~~L~~L~l~~N~-l~~ 301 (481)
++++.+|.. ..++.|+.+++++|+ +.+
T Consensus 279 ~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 279 NLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp EEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred cccccCCCC-ccccccChHHhcCCCCccC
Confidence 777766665 666777777777776 444
No 31
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-36 Score=316.96 Aligned_cols=297 Identities=20% Similarity=0.205 Sum_probs=222.5
Q ss_pred eccCcc-hhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchh
Q 039957 3 GQIPTE-IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNS 81 (481)
Q Consensus 3 g~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~ 81 (481)
+.+|.. |..+++|++|+|++|.++++.|..|.++++|++|+|++|.+++..|..+. .+++|++|+|++|.+++..+..
T Consensus 64 ~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~l~~~~ 142 (597)
T 3oja_B 64 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ-NVPLLTVLVLERNDLSSLPRGI 142 (597)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCCCCTTT
T ss_pred CCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHc-CCCCCCEEEeeCCCCCCCCHHH
Confidence 345544 56777777777777777777777777777777777777777754444443 6777777777777777655556
Q ss_pred ccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh
Q 039957 82 ITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS 161 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 161 (481)
|.++++|++|+|++|.+++..|..|+++++|++|++++|.+++++ +..+++|+.|++++|.+++...
T Consensus 143 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-----------~~~l~~L~~L~l~~n~l~~l~~-- 209 (597)
T 3oja_B 143 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-----------LSLIPSLFHANVSYNLLSTLAI-- 209 (597)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC-----------GGGCTTCSEEECCSSCCSEEEC--
T ss_pred hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC-----------hhhhhhhhhhhcccCccccccC--
Confidence 677777777777777777777777777777777777777777652 2345667777787777765321
Q ss_pred hhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCC
Q 039957 162 IGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEML 241 (481)
Q Consensus 162 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L 241 (481)
..+|+.|++++|.++...+.. .++|+.|++++|.+++ +..+..+++|+.|++++|.+.+..|..|..+++|
T Consensus 210 ----~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 280 (597)
T 3oja_B 210 ----PIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 280 (597)
T ss_dssp ----CTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred ----CchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCC
Confidence 246888888888877543322 2578888888888875 4678888888888888888888888888888888
Q ss_pred CeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCC
Q 039957 242 NLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRN 321 (481)
Q Consensus 242 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 321 (481)
+.|+|++|.+++. |..+..+++|+.|++++|.++ .+|..+..++.|+.|++++|.+.+.. +..++.|+.|++++|
T Consensus 281 ~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N 355 (597)
T 3oja_B 281 ERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHN 355 (597)
T ss_dssp CEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSS
T ss_pred CEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCC
Confidence 8888888888864 566677888888888888887 57777888888888888888887642 566778888888888
Q ss_pred eeeeec
Q 039957 322 QLSGDI 327 (481)
Q Consensus 322 ~l~~~~ 327 (481)
++.+..
T Consensus 356 ~~~~~~ 361 (597)
T 3oja_B 356 DWDCNS 361 (597)
T ss_dssp CEEHHH
T ss_pred CCCChh
Confidence 888653
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-36 Score=305.79 Aligned_cols=306 Identities=26% Similarity=0.382 Sum_probs=208.0
Q ss_pred cCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccc
Q 039957 5 IPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITN 84 (481)
Q Consensus 5 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 84 (481)
+| .+..+++|++|+|++|++++..| +.++++|++|++++|++++ ++. +. .+++|++|++++|++++..+ +..
T Consensus 61 l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~-~l~~L~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 61 ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITP-LA-NLTNLTGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCCCGG--GTT
T ss_pred Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc-Chh-hc-CCCCCCEEECCCCCCCCChH--HcC
Confidence 44 36777888888888888876544 7778888888888888874 443 43 67888888888887775433 777
Q ss_pred cccCceeecccCcceecCc-------------------ccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCc
Q 039957 85 ATKLIILDLGFNTFSGHIP-------------------NTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLV 145 (481)
Q Consensus 85 l~~L~~L~Ls~N~l~~~~p-------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~ 145 (481)
+++|++|++++|.+++..+ ..++++++|++|++++|.++.+ ..+..+++|+
T Consensus 133 l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~----------~~l~~l~~L~ 202 (466)
T 1o6v_A 133 LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI----------SVLAKLTNLE 202 (466)
T ss_dssp CTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC----------GGGGGCTTCS
T ss_pred CCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC----------hhhccCCCCC
Confidence 7888888888887765311 1134445555555555555443 1234556666
Q ss_pred EEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCC
Q 039957 146 YLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPET 225 (481)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n 225 (481)
+|++++|.+++..| ++.+ ++|+.|++++|.+++. ..+..+++|++|++++|.+++..| +..+++|+.|++++|
T Consensus 203 ~L~l~~n~l~~~~~--~~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 275 (466)
T 1o6v_A 203 SLIATNNQISDITP--LGIL-TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 275 (466)
T ss_dssp EEECCSSCCCCCGG--GGGC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred EEEecCCccccccc--cccc-CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCC
Confidence 77777776665443 3333 4677777777776642 356667777777777777765544 677777777777777
Q ss_pred cCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCC
Q 039957 226 NLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPS 305 (481)
Q Consensus 226 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 305 (481)
.+++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++..| +..++.|+.|++++|.+++. .
T Consensus 276 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 347 (466)
T 1o6v_A 276 QISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 347 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--G
T ss_pred ccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--h
Confidence 7776544 6677777777777777776443 6777778888888887776555 66777788888888877764 4
Q ss_pred ccccCCcCcEEEccCCeeeeeccccccccCChhhhhcccc
Q 039957 306 NVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 306 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~ 345 (481)
.+..+++|+.|++++|++++..| +..+++|+.++++++
T Consensus 348 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 348 SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 385 (466)
T ss_dssp GGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCE
T ss_pred hhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCC
Confidence 57777888888888888877665 677777777776654
No 33
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-36 Score=292.15 Aligned_cols=249 Identities=27% Similarity=0.389 Sum_probs=140.9
Q ss_pred CCccEEEccCcccee--ecchhccccccCceeeccc-CcceecCcccccCCCCCCEEEcccccCccccCCCccccccccC
Q 039957 62 PNIKYLELGDNNLIG--TIPNSITNATKLIILDLGF-NTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSL 138 (481)
Q Consensus 62 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l 138 (481)
.++++|+|++|.+++ .+|..|.++++|++|++++ |.+++.+|..|+++++|++|++++|++++..+ ..+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p--------~~~ 121 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP--------DFL 121 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECC--------GGG
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCC--------HHH
Confidence 345555555555555 5555555555555555553 55555555555555555555555555553311 223
Q ss_pred CCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCC-CCCeEecccccceecCCcCCcCCCCC
Q 039957 139 TNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLR-GLIYLSLGFNDLNGTIPTSIGTLKQL 217 (481)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L 217 (481)
.++++|++|+|++|.+++.+|..+..+ ++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |
T Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L 199 (313)
T 1ogq_A 122 SQIKTLVTLDFSYNALSGTLPPSISSL-PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-L 199 (313)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-C
T ss_pred hCCCCCCEEeCCCCccCCcCChHHhcC-CCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-c
Confidence 445555555555555555555555554 3555555555555555555555555 555555555555555555555554 5
Q ss_pred CeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCc
Q 039957 218 QGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSN 297 (481)
Q Consensus 218 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 297 (481)
+.|++++|.+++..|..|..+++|+.|++++|++++.+|. +..+++|++|++++|++++.+|..+..++.|++|++++|
T Consensus 200 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 5555555555555555555555555555555555544433 555555555555555555555555555555555555555
Q ss_pred ccCCCCCCccccCCcCcEEEccCCe
Q 039957 298 LLNDSLPSNVQKLKVLRVLDLSRNQ 322 (481)
Q Consensus 298 ~l~~~~p~~~~~l~~L~~L~l~~N~ 322 (481)
++++.+|.. ..+++|+.+++++|+
T Consensus 279 ~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 279 NLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cccccCCCC-ccccccChHHhcCCC
Confidence 555555554 455555555555555
No 34
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-36 Score=298.57 Aligned_cols=297 Identities=21% Similarity=0.212 Sum_probs=256.3
Q ss_pred eccCcc-hhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchh
Q 039957 3 GQIPTE-IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNS 81 (481)
Q Consensus 3 g~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~ 81 (481)
+.+|.. |..+++|++|+|++|+++++.+..|.++++|++|+|++|++++..|..+. .+++|++|++++|+++...+..
T Consensus 58 ~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~l~~~~ 136 (390)
T 3o6n_A 58 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ-NVPLLTVLVLERNDLSSLPRGI 136 (390)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCCCCTTT
T ss_pred hhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhc-CCCCCCEEECCCCccCcCCHHH
Confidence 456765 68899999999999999999888999999999999999999865555554 7999999999999998666666
Q ss_pred ccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh
Q 039957 82 ITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS 161 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 161 (481)
|..+++|++|++++|.+++..|..|+.+++|++|++++|.++.++ +..+++|+.|++++|.+++...
T Consensus 137 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-----------~~~l~~L~~L~l~~n~l~~~~~-- 203 (390)
T 3o6n_A 137 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-----------LSLIPSLFHANVSYNLLSTLAI-- 203 (390)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC-----------GGGCTTCSEEECCSSCCSEEEC--
T ss_pred hcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc-----------cccccccceeecccccccccCC--
Confidence 799999999999999999988989999999999999999998762 3456789999999999986422
Q ss_pred hhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCC
Q 039957 162 IGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEML 241 (481)
Q Consensus 162 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L 241 (481)
..+|++|++++|.++.. |.. ..++|++|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|
T Consensus 204 ----~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 204 ----PIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp ----CSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred ----CCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 25799999999999865 332 247899999999999864 578899999999999999999889999999999
Q ss_pred CeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCC
Q 039957 242 NLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRN 321 (481)
Q Consensus 242 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 321 (481)
+.|++++|++++. |..+..+++|++|++++|+++ .+|..+..++.|++|++++|.++.. | +..++.|+.|++++|
T Consensus 275 ~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N 349 (390)
T 3o6n_A 275 ERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHN 349 (390)
T ss_dssp CEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSS
T ss_pred CEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCC
Confidence 9999999999864 566788999999999999998 6777888999999999999999865 3 677889999999999
Q ss_pred eeeeec
Q 039957 322 QLSGDI 327 (481)
Q Consensus 322 ~l~~~~ 327 (481)
++.+.-
T Consensus 350 ~~~~~~ 355 (390)
T 3o6n_A 350 DWDCNS 355 (390)
T ss_dssp CEEHHH
T ss_pred Cccchh
Confidence 998753
No 35
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.2e-36 Score=314.27 Aligned_cols=308 Identities=20% Similarity=0.157 Sum_probs=269.7
Q ss_pred CCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCce
Q 039957 11 NLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLII 90 (481)
Q Consensus 11 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 90 (481)
.+++++.|++++|.+..+.+..|.++++|++|+|++|.+++..|..+. .+++|++|+|++|.+++..|..|+++++|++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhc-CCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 467899999999999998888899999999999999999965555665 8999999999999999988999999999999
Q ss_pred eecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCcc
Q 039957 91 LDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQ 170 (481)
Q Consensus 91 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 170 (481)
|+|++|.+++..+..|+++++|++|+|++|.++++++ ..+.++++|++|+|++|.+++.. +..+ ++|+
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~---~~~l-~~L~ 195 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED--------DTFQATTSLQNLQLSSNRLTHVD---LSLI-PSLF 195 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT--------TTTTTCTTCCEEECTTSCCSBCC---GGGC-TTCS
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh--------hhhhcCCcCcEEECcCCCCCCcC---hhhh-hhhh
Confidence 9999999998777778999999999999999998754 34678899999999999998753 3333 6899
Q ss_pred EEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCe
Q 039957 171 RFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNK 250 (481)
Q Consensus 171 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 250 (481)
.|++++|.+++. ....+|+.|++++|.+....+.. .++|+.|++++|.+++ +..+..+++|+.|++++|.
T Consensus 196 ~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~ 265 (597)
T 3oja_B 196 HANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNE 265 (597)
T ss_dssp EEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSC
T ss_pred hhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCc
Confidence 999999998753 34568999999999998654433 2689999999999997 4788999999999999999
Q ss_pred eeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecccc
Q 039957 251 LSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPST 330 (481)
Q Consensus 251 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 330 (481)
+++.+|..|..+++|+.|++++|++++ +|..+..++.|+.|++++|.+. .+|..+..+++|+.|++++|++.+..
T Consensus 266 l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--- 340 (597)
T 3oja_B 266 LEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--- 340 (597)
T ss_dssp CCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---
T ss_pred cCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---
Confidence 999999999999999999999999986 5777788999999999999998 57888899999999999999998653
Q ss_pred ccccCChhhhhccccc
Q 039957 331 IGALVDLETISLAGSF 346 (481)
Q Consensus 331 ~~~l~~L~~l~~~g~~ 346 (481)
+..+++|+.|+++++.
T Consensus 341 ~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 341 LSTHHTLKNLTLSHND 356 (597)
T ss_dssp CCTTCCCSEEECCSSC
T ss_pred hhhcCCCCEEEeeCCC
Confidence 6677888888877653
No 36
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.9e-35 Score=288.04 Aligned_cols=305 Identities=24% Similarity=0.390 Sum_probs=262.8
Q ss_pred chhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcccccc
Q 039957 8 EIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATK 87 (481)
Q Consensus 8 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 87 (481)
.+..+++|++|++++|.+..+ | .+..+++|++|++++|+++ .+|. + ..+++|++|++++|.++. +| .+..+++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~-~~~~-~-~~l~~L~~L~L~~n~i~~-~~-~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQIT-DISP-L-SNLVKLTNLYIGTNKITD-IS-ALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCC-CCGG-G-TTCTTCCEEECCSSCCCC-CG-GGTTCTT
T ss_pred cchhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccc-cchh-h-hcCCcCCEEEccCCcccC-ch-HHcCCCc
Confidence 356788999999999999865 4 4899999999999999998 5665 4 479999999999999985 44 6999999
Q ss_pred CceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhccc
Q 039957 88 LIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFST 167 (481)
Q Consensus 88 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 167 (481)
|++|++++|.+++..+ +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+ +..+ +
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~---------~~~~~l~~L~~L~l~~~~~~~~~~--~~~l-~ 177 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL---------SPLSNMTGLNYLTVTESKVKDVTP--IANL-T 177 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC---------GGGTTCTTCCEEECCSSCCCCCGG--GGGC-T
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc---------cchhhCCCCcEEEecCCCcCCchh--hccC-C
Confidence 9999999999996544 999999999999999654321 336788999999999999986543 5555 6
Q ss_pred CccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecC
Q 039957 168 SLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLG 247 (481)
Q Consensus 168 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~ 247 (481)
+|++|++++|.+.+.. . +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+++
T Consensus 178 ~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 178 DLYSLSLNYNQIEDIS-P-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIG 251 (347)
T ss_dssp TCSEEECTTSCCCCCG-G-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred CCCEEEccCCcccccc-c-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECC
Confidence 8999999999998543 3 8889999999999999986554 8899999999999999997655 8899999999999
Q ss_pred CCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeec
Q 039957 248 GNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDI 327 (481)
Q Consensus 248 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 327 (481)
+|.+++. +.+..+++|++|++++|++++. ..+..++.|+.|++++|.+.+..|..+..+++|++|++++|++++..
T Consensus 252 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 252 TNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCG
T ss_pred CCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccccc
Confidence 9999864 5789999999999999999864 45888999999999999999888888999999999999999999776
Q ss_pred cccccccCChhhhhcccc
Q 039957 328 PSTIGALVDLETISLAGS 345 (481)
Q Consensus 328 p~~~~~l~~L~~l~~~g~ 345 (481)
| +..+++|++++++++
T Consensus 328 ~--~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 328 P--LASLSKMDSADFANQ 343 (347)
T ss_dssp G--GGGCTTCSEESSSCC
T ss_pred C--hhhhhccceeehhhh
Confidence 6 888999999998875
No 37
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.4e-35 Score=284.31 Aligned_cols=287 Identities=23% Similarity=0.284 Sum_probs=231.8
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
+++.+++++|.++ .+|..++ ++|++|++++|++++..|..|.++++|++|++++|.+++..|..|+++++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 6888888888887 7777653 67888888888888777778888888888888888888888888888888888888
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCcee--ecCCcccccCCCCCe
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLK--GTIPKEIGHLRGLIY 195 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~--~~~p~~~~~l~~L~~ 195 (481)
++|+++.++... . ++|++|++++|.+++..+..+..+ ++|+.|++++|.++ +..|..+..+ +|++
T Consensus 110 ~~n~l~~l~~~~---------~--~~L~~L~l~~n~i~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~ 176 (332)
T 2ft3_A 110 SKNHLVEIPPNL---------P--SSLVELRIHDNRIRKVPKGVFSGL-RNMNCIEMGGNPLENSGFEPGAFDGL-KLNY 176 (332)
T ss_dssp CSSCCCSCCSSC---------C--TTCCEEECCSSCCCCCCSGGGSSC-SSCCEEECCSCCCBGGGSCTTSSCSC-CCSC
T ss_pred CCCcCCccCccc---------c--ccCCEEECCCCccCccCHhHhCCC-ccCCEEECCCCccccCCCCcccccCC-ccCE
Confidence 888888664322 1 578888888888886666666665 57888888888885 3667777777 8899
Q ss_pred EecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcC
Q 039957 196 LSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKL 275 (481)
Q Consensus 196 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 275 (481)
|++++|++++ +|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..|..+++|+.|++++|++
T Consensus 177 L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 253 (332)
T 2ft3_A 177 LRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253 (332)
T ss_dssp CBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred EECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcC
Confidence 9999998875 555554 6888899999999888888888889999999999999888777888889999999999998
Q ss_pred cccCCcchhccccCcEEEccCcccCCCCCCcccc------CCcCcEEEccCCeee--eeccccccccCChhhhhcccc
Q 039957 276 TSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQK------LKVLRVLDLSRNQLS--GDIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 276 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~l~~~g~ 345 (481)
+ .+|..+..++.|+.|++++|++++..+..|.. ...|+.+++++|++. +..|.+|..+.+|+.++++++
T Consensus 254 ~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 254 S-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp C-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred e-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 8 77888888899999999999998777766654 356889999999887 567788888888888877654
No 38
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2e-35 Score=285.93 Aligned_cols=299 Identities=22% Similarity=0.282 Sum_probs=250.2
Q ss_pred eccCcchhCC------CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcccee
Q 039957 3 GQIPTEIGNL------QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIG 76 (481)
Q Consensus 3 g~lp~~~~~l------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 76 (481)
..+|..+... .+++.+++++|.++. +|..+ .++|++|++++|++++..|..+. .+++|++|++++|++++
T Consensus 17 ~~lp~~~~~~cp~~c~c~l~~l~~~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~ 92 (332)
T 2ft3_A 17 DSLPPTYSAMCPFGCHCHLRVVQCSDLGLKA-VPKEI--SPDTTLLDLQNNDISELRKDDFK-GLQHLYALVLVNNKISK 92 (332)
T ss_dssp --------CCCCSSCEEETTEEECCSSCCSS-CCSCC--CTTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCE
T ss_pred ccCCCcccCCCCCCCcccCCEEECCCCCccc-cCCCC--CCCCeEEECCCCcCCccCHhHhh-CCCCCcEEECCCCccCc
Confidence 3466655443 369999999999985 56555 36899999999999855555554 89999999999999999
Q ss_pred ecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccce
Q 039957 77 TIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGG 156 (481)
Q Consensus 77 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 156 (481)
..|..|.++++|++|++++|.++. +|..+. ++|++|++++|+++.++.. .+.++++|++|++++|.++.
T Consensus 93 ~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~--------~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 93 IHEKAFSPLRKLQKLYISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKG--------VFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp ECGGGSTTCTTCCEEECCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSG--------GGSSCSSCCEEECCSCCCBG
T ss_pred cCHhHhhCcCCCCEEECCCCcCCc-cCcccc--ccCCEEECCCCccCccCHh--------HhCCCccCCEEECCCCcccc
Confidence 989999999999999999999994 555554 8999999999999987543 35788999999999999963
Q ss_pred --eCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCcc
Q 039957 157 --ILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHN 234 (481)
Q Consensus 157 --~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~ 234 (481)
..|..+..+ +|+.|++++|++++ +|..+. ++|++|++++|.+++..+..+..+++|+.|++++|++++..+..
T Consensus 162 ~~~~~~~~~~l--~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 236 (332)
T 2ft3_A 162 SGFEPGAFDGL--KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS 236 (332)
T ss_dssp GGSCTTSSCSC--CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG
T ss_pred CCCCcccccCC--ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH
Confidence 666666665 79999999999995 666554 78999999999999888899999999999999999999988889
Q ss_pred ccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhcc------ccCcEEEccCcccC--CCCCCc
Q 039957 235 LCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSL------GYILEINLSSNLLN--DSLPSN 306 (481)
Q Consensus 235 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~--~~~p~~ 306 (481)
+..+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..|... ..++.+++++|.+. +..|..
T Consensus 237 ~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~ 315 (332)
T 2ft3_A 237 LSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPAT 315 (332)
T ss_dssp GGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGG
T ss_pred hhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccc
Confidence 999999999999999999 678889999999999999999998777777653 56899999999997 678888
Q ss_pred cccCCcCcEEEccCCe
Q 039957 307 VQKLKVLRVLDLSRNQ 322 (481)
Q Consensus 307 ~~~l~~L~~L~l~~N~ 322 (481)
|..++.|+.+++++|+
T Consensus 316 ~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 316 FRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GTTBCCSTTEEC----
T ss_pred ccccchhhhhhccccc
Confidence 9999999999999985
No 39
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.3e-35 Score=284.78 Aligned_cols=289 Identities=25% Similarity=0.399 Sum_probs=250.4
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+| .+..+++|++|++++|+++++.+ +..+++|++|++++|.++ .+|. +. .+++|++|++++|++++..+ +.
T Consensus 58 ~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-~~~~-~~-~l~~L~~L~l~~n~i~~~~~--~~ 129 (347)
T 4fmz_A 58 SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DISA-LQ-NLTNLRELYLNEDNISDISP--LA 129 (347)
T ss_dssp CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG-GT-TCTTCSEEECTTSCCCCCGG--GT
T ss_pred cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-CchH-Hc-CCCcCCEEECcCCcccCchh--hc
Confidence 344 48899999999999999987644 999999999999999998 5653 44 79999999999999985544 89
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
.+++|++|++++|.....++ .+..+++|++|++++|.++..+. +..+++|++|++++|.+++..+ +.
T Consensus 130 ~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~----------~~~l~~L~~L~l~~n~l~~~~~--~~ 196 (347)
T 4fmz_A 130 NLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP----------IANLTDLYSLSLNYNQIEDISP--LA 196 (347)
T ss_dssp TCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG----------GGGCTTCSEEECTTSCCCCCGG--GG
T ss_pred cCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh----------hccCCCCCEEEccCCccccccc--cc
Confidence 99999999999997665544 49999999999999999987632 5678899999999999986533 55
Q ss_pred hcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCe
Q 039957 164 NFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNL 243 (481)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~ 243 (481)
.+ ++|+.+++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.
T Consensus 197 ~l-~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 269 (347)
T 4fmz_A 197 SL-TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKM 269 (347)
T ss_dssp GC-TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCE
T ss_pred CC-CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCE
Confidence 55 689999999999986544 8899999999999999986544 88999999999999999874 56889999999
Q ss_pred eecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCee
Q 039957 244 LHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQL 323 (481)
Q Consensus 244 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 323 (481)
|++++|++++. +.+..+++|+.|++++|++++..|..+..++.|++|++++|++++..| +..+++|+.|++++|++
T Consensus 270 L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 270 LNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred EEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 99999999875 568999999999999999999999999999999999999999998766 88999999999999998
Q ss_pred e
Q 039957 324 S 324 (481)
Q Consensus 324 ~ 324 (481)
+
T Consensus 346 ~ 346 (347)
T 4fmz_A 346 K 346 (347)
T ss_dssp -
T ss_pred c
Confidence 6
No 40
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.2e-35 Score=297.12 Aligned_cols=259 Identities=20% Similarity=0.165 Sum_probs=167.8
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.-+.+++.+++|++|++++|.+++. | .+..+++|++|++++|++++ +| +. .+++|++|++++|++++. | ++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~-~l~~L~~L~Ls~N~l~~~-~--~~ 103 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LS-QNTNLTYLACDSNKLTNL-D--VT 103 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CT-TCTTCSEEECCSSCCSCC-C--CT
T ss_pred ccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cc-cCCCCCEEECcCCCCcee-e--cC
Confidence 3455788899999999999999875 5 68999999999999999985 55 43 789999999999999864 3 88
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
.+++|++|++++|++++. | ++.+++|++|++++|++++++ +..+++|++|++++|...+.++ +.
T Consensus 104 ~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l~-----------l~~l~~L~~L~l~~n~~~~~~~--~~ 167 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEID-----------VSHNTQLTELDCHLNKKITKLD--VT 167 (457)
T ss_dssp TCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCCC-----------CTTCTTCCEEECTTCSCCCCCC--CT
T ss_pred CCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccceec-----------cccCCcCCEEECCCCCcccccc--cc
Confidence 999999999999999974 4 889999999999999998762 2345556666666664433332 33
Q ss_pred hcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCe
Q 039957 164 NFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNL 243 (481)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~ 243 (481)
.+ ++|+.|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.
T Consensus 168 ~l-~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~ 237 (457)
T 3bz5_A 168 PQ-TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTY 237 (457)
T ss_dssp TC-TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSE
T ss_pred cC-CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCE
Confidence 33 355666666666554 33 55555555556555555543 25555555555555555555 23 455555555
Q ss_pred eecCCCeeeecCCcccccCC-------CCCcEEcCCCcCcccCCcchhccccCcEEEccCccc
Q 039957 244 LHLGGNKLSGHIPPCLASLT-------SLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLL 299 (481)
Q Consensus 244 L~L~~N~l~~~~p~~~~~l~-------~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 299 (481)
|++++|++++.++..+..++ +|+.|++++|.+.+.+| +..++.|+.|++++|..
T Consensus 238 L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~ 298 (457)
T 3bz5_A 238 FDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQ 298 (457)
T ss_dssp EECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTT
T ss_pred EEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcc
Confidence 55555555554433333332 33344444444333333 23344444444444443
No 41
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.5e-34 Score=279.64 Aligned_cols=289 Identities=21% Similarity=0.225 Sum_probs=231.8
Q ss_pred cCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEE
Q 039957 37 STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLS 116 (481)
Q Consensus 37 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 116 (481)
.+++.++++++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+++..|..|+++++|++|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 36888888888887 6776543 6788888888888877777888888888888888888888788888888888888
Q ss_pred cccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceee--cCCcccccCCCCC
Q 039957 117 LLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKG--TIPKEIGHLRGLI 194 (481)
Q Consensus 117 L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~--~~p~~~~~l~~L~ 194 (481)
+++|+++.++... .++|++|++++|.+++..+..+..+ ++|+.|++++|.++. ..+..+..+++|+
T Consensus 107 Ls~n~l~~l~~~~-----------~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 107 LSKNQLKELPEKM-----------PKTLQELRVHENEITKVRKSVFNGL-NQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp CCSSCCSBCCSSC-----------CTTCCEEECCSSCCCBBCHHHHTTC-TTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCcCCccChhh-----------cccccEEECCCCcccccCHhHhcCC-ccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 8888888664322 1578888888888887666667666 578889998888853 6677888888999
Q ss_pred eEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCc
Q 039957 195 YLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNK 274 (481)
Q Consensus 195 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 274 (481)
+|++++|.++. +|..+. ++|+.|++++|++++..|..|..+++|+.|++++|++++..+..|..+++|++|++++|+
T Consensus 175 ~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 175 YIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp EEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred EEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 99999998874 555544 788899999999888888888888999999999999988888888888999999999998
Q ss_pred CcccCCcchhccccCcEEEccCcccCCCCCCcccc------CCcCcEEEccCCeeee--eccccccccCChhhhhcccc
Q 039957 275 LTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQK------LKVLRVLDLSRNQLSG--DIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 275 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~l~~~g~ 345 (481)
++ .+|..+..++.|++|++++|++++..+..|.. ...++.+++++|++.. ..|..|..+.+++.++++++
T Consensus 252 l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 252 LV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred Cc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 88 77888888889999999999998777666643 3678889999998863 55677888888888877654
No 42
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.4e-34 Score=278.09 Aligned_cols=290 Identities=20% Similarity=0.237 Sum_probs=244.9
Q ss_pred CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceee
Q 039957 13 QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILD 92 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 92 (481)
.+++.++++++.++. +|..+. +++++|++++|++++..+..+ ..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDF-KNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTT-TTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhh-ccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 478999999999985 455443 689999999999985444455 4899999999999999988899999999999999
Q ss_pred cccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccce--eCChhhhhcccCcc
Q 039957 93 LGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGG--ILPPSIGNFSTSLQ 170 (481)
Q Consensus 93 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~~L~ 170 (481)
+++|.++. +|..+. ++|++|++++|.+++++. ..+.++++|++|++++|.++. ..+..+..+ ++|+
T Consensus 107 Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~--------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~~L~ 174 (330)
T 1xku_A 107 LSKNQLKE-LPEKMP--KTLQELRVHENEITKVRK--------SVFNGLNQMIVVELGTNPLKSSGIENGAFQGM-KKLS 174 (330)
T ss_dssp CCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCH--------HHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC-TTCC
T ss_pred CCCCcCCc-cChhhc--ccccEEECCCCcccccCH--------hHhcCCccccEEECCCCcCCccCcChhhccCC-CCcC
Confidence 99999984 565554 799999999999987643 235678899999999999964 667777776 6899
Q ss_pred EEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCe
Q 039957 171 RFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNK 250 (481)
Q Consensus 171 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 250 (481)
+|++++|.++. +|..+. ++|++|++++|++++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+
T Consensus 175 ~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 175 YIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp EEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred EEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 99999999984 665554 789999999999999889999999999999999999999888899999999999999999
Q ss_pred eeecCCcccccCCCCCcEEcCCCcCcccCCcchhcc------ccCcEEEccCcccCC--CCCCccccCCcCcEEEccCCe
Q 039957 251 LSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSL------GYILEINLSSNLLND--SLPSNVQKLKVLRVLDLSRNQ 322 (481)
Q Consensus 251 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~ 322 (481)
++ .+|..+..+++|++|++++|++++..+..|... ..+..+++++|.+.. ..|..|..+..++.+++++|+
T Consensus 252 l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 252 LV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred Cc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 98 678889999999999999999998777776543 678899999999864 667889999999999999985
No 43
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.3e-34 Score=290.38 Aligned_cols=289 Identities=26% Similarity=0.382 Sum_probs=246.5
Q ss_pred cCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecc-----
Q 039957 5 IPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIP----- 79 (481)
Q Consensus 5 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----- 79 (481)
+|. +..+++|++|++++|++++..| +.++++|++|++++|+++ .+|. +. .+++|++|++++|.+++...
T Consensus 83 ~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~-~~~~-~~-~l~~L~~L~l~~n~l~~~~~~~~l~ 156 (466)
T 1o6v_A 83 ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT-DIDP-LK-NLTNLNRLELSSNTISDISALSGLT 156 (466)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG-GT-TCTTCSEEEEEEEEECCCGGGTTCT
T ss_pred chh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCC-CChH-Hc-CCCCCCEEECCCCccCCChhhccCC
Confidence 444 8888999999999999987655 888999999999999887 4554 43 78889999998888765321
Q ss_pred --------------hhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCc
Q 039957 80 --------------NSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLV 145 (481)
Q Consensus 80 --------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~ 145 (481)
..+.++++|++|++++|.+++. ..+..+++|++|++++|.+++..+ +..+++|+
T Consensus 157 ~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~----------~~~l~~L~ 224 (466)
T 1o6v_A 157 SLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------LGILTNLD 224 (466)
T ss_dssp TCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG----------GGGCTTCC
T ss_pred cccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc----------ccccCCCC
Confidence 1267788999999999999864 358999999999999999987632 45678999
Q ss_pred EEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCC
Q 039957 146 YLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPET 225 (481)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n 225 (481)
+|++++|.+++. +.+..+ ++|+.|++++|.+++..| +..+++|++|++++|.+++..+ +..+++|+.|++++|
T Consensus 225 ~L~l~~n~l~~~--~~l~~l-~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 297 (466)
T 1o6v_A 225 ELSLNGNQLKDI--GTLASL-TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 297 (466)
T ss_dssp EEECCSSCCCCC--GGGGGC-TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred EEECCCCCcccc--hhhhcC-CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCC
Confidence 999999999864 456665 689999999999997654 8899999999999999987554 889999999999999
Q ss_pred cCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCC
Q 039957 226 NLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPS 305 (481)
Q Consensus 226 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 305 (481)
++.+..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..++.|+.|++++|++++..|
T Consensus 298 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 370 (466)
T 1o6v_A 298 QLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP- 370 (466)
T ss_dssp CCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-
T ss_pred cccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-
Confidence 9998655 8899999999999999998765 78999999999999999875 478899999999999999998877
Q ss_pred ccccCCcCcEEEccCCeeeee
Q 039957 306 NVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 306 ~~~~l~~L~~L~l~~N~l~~~ 326 (481)
+..+++|+.|++++|++++.
T Consensus 371 -~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 371 -LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp -GTTCTTCCEEECCCEEEECC
T ss_pred -hhcCCCCCEEeccCCcccCC
Confidence 88999999999999999973
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.2e-34 Score=289.61 Aligned_cols=303 Identities=23% Similarity=0.277 Sum_probs=156.3
Q ss_pred eccCcchhCCCCCCeeeCcCCcccccCChhccCCcCC-------------CEEEeeCCcCccccChhhh-----------
Q 039957 3 GQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTI-------------RNLNLGGNRLSGHLPSMIG----------- 58 (481)
Q Consensus 3 g~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p~~~~----------- 58 (481)
|++|.+|+++++|++|++++|++++.+|..++++++| ++|++++|.+++ +|....
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~~~~L~~L~l~~n~ 102 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPELPPHLESLVASCNS 102 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSCCTTCSEEECCSSC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCCcCCCCEEEccCCc
Confidence 6788888888888888888888888888877776643 556666555552 332100
Q ss_pred -----cCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccc-
Q 039957 59 -----HSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQW- 132 (481)
Q Consensus 59 -----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~- 132 (481)
...++|++|++++|++++ +|.. .++|++|++++|++++ +| +|+++++|++|++++|++++++......
T Consensus 103 l~~lp~~~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~~~L~ 176 (454)
T 1jl5_A 103 LTELPELPQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLPPSLE 176 (454)
T ss_dssp CSSCCCCCTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCCTTCC
T ss_pred CCccccccCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCccccc
Confidence 012445555555555442 2211 1578888888888886 66 5888889999999998888764322100
Q ss_pred ---------cccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccc
Q 039957 133 ---------SFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDL 203 (481)
Q Consensus 133 ---------~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 203 (481)
...+.+.++++|++|++++|++++ +|.. ..+|++|++++|.++ .+| .++.+++|++|++++|++
T Consensus 177 ~L~L~~n~l~~l~~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 177 FIAAGNNQLEELPELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLL 249 (454)
T ss_dssp EEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCC
T ss_pred EEECcCCcCCcCccccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcC
Confidence 001134445555555555555553 2221 134556666666555 444 255566666666666666
Q ss_pred eecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcch
Q 039957 204 NGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSL 283 (481)
Q Consensus 204 ~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 283 (481)
++ +|.. +++|+.|++++|++++ +|.. +++|+.|++++|++++.. .. .++|+.|++++|++++. +
T Consensus 250 ~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~-~~---~~~L~~L~l~~N~l~~i-~--- 313 (454)
T 1jl5_A 250 KT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS-EL---PPNLYYLNASSNEIRSL-C--- 313 (454)
T ss_dssp SS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES-CC---CTTCCEEECCSSCCSEE-C---
T ss_pred Cc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCccc-Cc---CCcCCEEECcCCcCCcc-c---
Confidence 53 3322 2455555666555554 2322 245556666666655421 10 02333444444433321 1
Q ss_pred hcc-ccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhccc
Q 039957 284 WSL-GYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAG 344 (481)
Q Consensus 284 ~~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g 344 (481)
.+ +.|++|++++|++++ +|.. +++|++|++++|++++ +|. .+.+|++|++++
T Consensus 314 -~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~ 366 (454)
T 1jl5_A 314 -DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEY 366 (454)
T ss_dssp -CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred -CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCC
Confidence 11 355556666665554 3332 3455566666665552 333 244555555444
No 45
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-33 Score=284.72 Aligned_cols=282 Identities=20% Similarity=0.222 Sum_probs=241.2
Q ss_pred cCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccc
Q 039957 5 IPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITN 84 (481)
Q Consensus 5 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 84 (481)
+| +|+.+++|++|+|++|+++++ | +..+++|++|++++|++++ +| +. .+++|++|++++|++++ +| +..
T Consensus 57 ~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~-~l~~L~~L~L~~N~l~~-l~--~~~ 125 (457)
T 3bz5_A 57 MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VT-PLTKLTYLNCDTNKLTK-LD--VSQ 125 (457)
T ss_dssp CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CT-TCTTCCEEECCSSCCSC-CC--CTT
T ss_pred Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cC-CCCcCCEEECCCCcCCe-ec--CCC
Confidence 56 699999999999999999986 4 8999999999999999995 55 44 79999999999999987 44 899
Q ss_pred cccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhh
Q 039957 85 ATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGN 164 (481)
Q Consensus 85 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 164 (481)
+++|++|++++|++++. + ++.+++|++|++++|+..+.. .+..+++|++|++++|++++ +| +..
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~----------~~~~l~~L~~L~ls~n~l~~-l~--l~~ 189 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL----------DVTPQTQLTTLDCSFNKITE-LD--VSQ 189 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC----------CCTTCTTCCEEECCSSCCCC-CC--CTT
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc----------ccccCCcCCEEECCCCccce-ec--ccc
Confidence 99999999999999984 3 899999999999999644321 25678899999999999997 44 555
Q ss_pred cccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCcc-----
Q 039957 165 FSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLE----- 239 (481)
Q Consensus 165 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~----- 239 (481)
+ ++|+.|++++|++++. .++.+++|++|++++|++++ +| ++.+++|+.|++++|++++..+..+..++
T Consensus 190 l-~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 190 N-KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCI 262 (457)
T ss_dssp C-TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECT
T ss_pred C-CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEecc
Confidence 5 6899999999999975 48899999999999999997 55 88999999999999999998776666665
Q ss_pred --CCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcc--------hhccccCcEEEccCcccCCCCCCcccc
Q 039957 240 --MLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSS--------LWSLGYILEINLSSNLLNDSLPSNVQK 309 (481)
Q Consensus 240 --~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--------~~~l~~L~~L~l~~N~l~~~~p~~~~~ 309 (481)
+|+.+++++|.+.+.+| +..+++|+.|++++|...+.+|.. +..++.|++|++++|++++. + +..
T Consensus 263 ~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~ 337 (457)
T 3bz5_A 263 QTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSH 337 (457)
T ss_dssp TCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTT
T ss_pred CCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--ccc
Confidence 56778888887766665 567899999999999987776643 45567889999999999984 3 889
Q ss_pred CCcCcEEEccCCeeee
Q 039957 310 LKVLRVLDLSRNQLSG 325 (481)
Q Consensus 310 l~~L~~L~l~~N~l~~ 325 (481)
++.|+.|++++|++++
T Consensus 338 l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 338 NTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CTTCSEEECCSSCCCB
T ss_pred CCcCcEEECCCCCCCC
Confidence 9999999999999986
No 46
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-36 Score=307.84 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=26.4
Q ss_pred hhhhhHHHHHhhhhccCccceeecccCCCC
Q 039957 373 FRSFNSECEVLRNVRHQNLIKILSSCSTPD 402 (481)
Q Consensus 373 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 402 (481)
.++|..|++.+++++|+|+|+++|||.+..
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 467999999999999999999999998865
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.3e-32 Score=271.21 Aligned_cols=282 Identities=25% Similarity=0.319 Sum_probs=194.0
Q ss_pred CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceee
Q 039957 13 QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILD 92 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 92 (481)
++|++|++++|+++++ |.. .++|++|++++|++++ +|+ +. .+++|++|++++|++++ +|..+ .+|++|+
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp~-~~-~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LPE-LQ-NSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CCC-CT-TCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Ccc-cC-CCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 4455555555555432 111 1467777777777773 663 43 67777777777777764 44433 4777778
Q ss_pred cccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEE
Q 039957 93 LGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRF 172 (481)
Q Consensus 93 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 172 (481)
+++|.+++ +| .|+++++|++|++++|++++++.. .++|++|++++|.++ .+|. ++.+ ++|++|
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~------------~~~L~~L~l~~n~l~-~lp~-~~~l-~~L~~L 242 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL------------PLSLESIVAGNNILE-ELPE-LQNL-PFLTTI 242 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC------------CTTCCEEECCSSCCS-SCCC-CTTC-TTCCEE
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC------------cCcccEEECcCCcCC-cccc-cCCC-CCCCEE
Confidence 88887776 45 578888888888888888775432 247999999999998 5664 6665 689999
Q ss_pred EccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeee
Q 039957 173 SASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 173 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 252 (481)
++++|++++ +|.. +++|++|++++|++++ +|.. +++|+.|++++|++++. |.. .++|+.|++++|+++
T Consensus 243 ~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~ 310 (454)
T 1jl5_A 243 YADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIR 310 (454)
T ss_dssp ECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCS
T ss_pred ECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCC
Confidence 999999985 5543 4789999999999886 5543 37889999999998873 211 157888999999888
Q ss_pred ecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeee--ecccc
Q 039957 253 GHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSG--DIPST 330 (481)
Q Consensus 253 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~ 330 (481)
+. +.. .++|++|++++|++++ +|.. ++.|++|++++|+++. +|. .+++|++|++++|++++ .+|..
T Consensus 311 ~i-~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~ 378 (454)
T 1jl5_A 311 SL-CDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPES 378 (454)
T ss_dssp EE-CCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTT
T ss_pred cc-cCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHH
Confidence 63 211 2588899999999886 5554 4788899999998874 555 46788999999999988 67888
Q ss_pred cccc-------------CChhhhhccccc
Q 039957 331 IGAL-------------VDLETISLAGSF 346 (481)
Q Consensus 331 ~~~l-------------~~L~~l~~~g~~ 346 (481)
++.+ .+|+.|+++++.
T Consensus 379 l~~L~~n~~~~~i~~~~~~L~~L~ls~N~ 407 (454)
T 1jl5_A 379 VEDLRMNSHLAEVPELPQNLKQLHVETNP 407 (454)
T ss_dssp CCEEECCC---------------------
T ss_pred HHhhhhcccccccccccCcCCEEECCCCc
Confidence 8777 778888887654
No 48
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=100.00 E-value=3.9e-32 Score=259.77 Aligned_cols=249 Identities=24% Similarity=0.291 Sum_probs=177.6
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceee--cchhccccccCceeec
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGT--IPNSITNATKLIILDL 93 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L 93 (481)
+.++.+++.++.+ |..+ .++|++|++++|+++ .+|..++..+++|++|+|++|+++.. .|..+..+++|++|++
T Consensus 10 ~~l~c~~~~l~~i-p~~~--~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcccC-CCCC--CCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 5788888888754 4433 267889999999987 67776555788999999999988733 3677778889999999
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEE
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFS 173 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~ 173 (481)
++|.++. +|..|..+++|++|++++|.+++++.. ..+..+++|++|++++|.+++..|..+..+ ++|++|+
T Consensus 86 s~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~-------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~ 156 (306)
T 2z66_A 86 SFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF-------SVFLSLRNLIYLDISHTHTRVAFNGIFNGL-SSLEVLK 156 (306)
T ss_dssp CSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTT-------TTTTTCTTCCEEECTTSCCEECSTTTTTTC-TTCCEEE
T ss_pred CCCcccc-ChhhcCCCCCCCEEECCCCcccccccc-------hhhhhccCCCEEECCCCcCCccchhhcccC-cCCCEEE
Confidence 9998884 566788889999999998888876431 235667778888888888877666666655 4677777
Q ss_pred ccCCceee-cCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeee
Q 039957 174 ASECKLKG-TIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 174 l~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 252 (481)
+++|.+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 77777765 45666777777777777777776666666666666666666666666655555666666666666666666
Q ss_pred ecCCcccccCC-CCCcEEcCCCcCcc
Q 039957 253 GHIPPCLASLT-SLRELDLGSNKLTS 277 (481)
Q Consensus 253 ~~~p~~~~~l~-~L~~L~ls~N~l~~ 277 (481)
+..|..+..++ +|++|++++|.+++
T Consensus 237 ~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 237 TSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp BCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ccCHHHHHhhhccCCEEEccCCCeec
Confidence 66666666553 56666666666653
No 49
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=100.00 E-value=1.3e-32 Score=263.08 Aligned_cols=248 Identities=21% Similarity=0.185 Sum_probs=157.5
Q ss_pred CCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceec--CcccccCCCCCCEEE
Q 039957 39 IRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGH--IPNTFGNLRHLSVLS 116 (481)
Q Consensus 39 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~ 116 (481)
-+.++.+++.++ .+|..++ ++|++|++++|+++...+..|.++++|++|+|++|.++.. .|..+..+++|++|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CCEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 357889999997 7887553 6899999999999865556688999999999999988743 367777888899999
Q ss_pred cccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCC-hhhhhcccCccEEEccCCceeecCCcccccCCCCCe
Q 039957 117 LLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP-PSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIY 195 (481)
Q Consensus 117 L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 195 (481)
+++|.++.++ ..+..+++|++|++++|++++..+ ..+..+ ++|++|++++|.+++..|..+..+++|++
T Consensus 85 Ls~n~i~~l~---------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 85 LSFNGVITMS---------SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp CCSCSEEEEE---------EEEETCTTCCEEECTTSEEESSTTTTTTTTC-TTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred CCCCccccCh---------hhcCCCCCCCEEECCCCcccccccchhhhhc-cCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 9888887653 224567778888888887775443 334443 45666666666666655656666666666
Q ss_pred Eeccccccee-cCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCc
Q 039957 196 LSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNK 274 (481)
Q Consensus 196 L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 274 (481)
|++++|.+++ ..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..|..+++|++|++++|+
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 6666666654 345555555555555555555555445555555555555555555554444445555555555555555
Q ss_pred CcccCCcchhccc-cCcEEEccCcccC
Q 039957 275 LTSSIPSSLWSLG-YILEINLSSNLLN 300 (481)
Q Consensus 275 l~~~~p~~~~~l~-~L~~L~l~~N~l~ 300 (481)
+++..|..+..++ .|++|++++|.+.
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CcccCHHHHHhhhccCCEEEccCCCee
Confidence 5544444444432 4444444444443
No 50
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=6.7e-33 Score=270.53 Aligned_cols=279 Identities=20% Similarity=0.211 Sum_probs=161.6
Q ss_pred cCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEE
Q 039957 37 STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLS 116 (481)
Q Consensus 37 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 116 (481)
+.....+.++|.++ .+|..++ ++|++|++++|++++..+..|.++++|++|++++|.+++..|..|+++++|++|+
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 33344455555554 4444332 3455555555555544444455555555555555555544444555555555555
Q ss_pred cccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCC-hhhhhcccCccEEEccCC-ceeecCCcccccCCCCC
Q 039957 117 LLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP-PSIGNFSTSLQRFSASEC-KLKGTIPKEIGHLRGLI 194 (481)
Q Consensus 117 L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~L~~L~l~~n-~l~~~~p~~~~~l~~L~ 194 (481)
+++|++++++.. .+.++++|++|++++|++++..+ ..+..+ ++|++|++++| .+....|..+.++++|+
T Consensus 107 Ls~n~l~~~~~~--------~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 107 LSYNYLSNLSSS--------WFKPLSSLTFLNLLGNPYKTLGETSLFSHL-TKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp CCSSCCSSCCHH--------HHTTCTTCSEEECTTCCCSSSCSSCSCTTC-TTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCcCCcCCHh--------HhCCCccCCEEECCCCCCcccCchhhhccC-CCCcEEECCCCccccccCHHHccCCCCCC
Confidence 555555443211 12344455555555555543222 133333 34555555555 34444455566666666
Q ss_pred eEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccc---cCCCCCcEEcC
Q 039957 195 YLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLA---SLTSLRELDLG 271 (481)
Q Consensus 195 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~ls 271 (481)
+|++++|++++..|..+..+++|+.|++++|.+....+..+..+++|+.|++++|++++..+..+. ..+.++.++++
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~ 257 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEE
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccc
Confidence 666666666666666666666666666666666543333344566677777777777655444332 34567778888
Q ss_pred CCcCcc----cCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecc
Q 039957 272 SNKLTS----SIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIP 328 (481)
Q Consensus 272 ~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 328 (481)
++.+++ .+|..+..++.|++|++++|+++...+..+..+++|++|++++|++.+..|
T Consensus 258 ~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 258 NVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp SCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 887765 367778888899999999999985444446889999999999999987654
No 51
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4.6e-35 Score=296.45 Aligned_cols=333 Identities=22% Similarity=0.213 Sum_probs=235.8
Q ss_pred hhCCCCCCeeeCcCCcccc----cCChhccCCcCCCEEEeeCCcCccccChhhhcCCC----CccEEEccCcccee----
Q 039957 9 IGNLQNLKSLFLGANNLSG----LIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLP----NIKYLELGDNNLIG---- 76 (481)
Q Consensus 9 ~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~----~L~~L~L~~N~l~~---- 76 (481)
+..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..++..++ +|++|+|++|+++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 6677888888888888764 34566777788888888888887544555554555 68888888888773
Q ss_pred ecchhccccccCceeecccCcceecCccccc-----CCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccC
Q 039957 77 TIPNSITNATKLIILDLGFNTFSGHIPNTFG-----NLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSG 151 (481)
Q Consensus 77 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 151 (481)
.++..+..+++|++|++++|.++...+..+. ..++|++|++++|+++...... +...+..+++|++|++++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~----l~~~l~~~~~L~~L~L~~ 179 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP----LASVLRAKPDFKELTVSN 179 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH----HHHHHHHCTTCCEEECCS
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH----HHHHHhhCCCCCEEECcC
Confidence 5577788888888888888887755444333 3567888888888877642111 123345567888888888
Q ss_pred CccceeCChhhhh----cccCccEEEccCCceeec----CCcccccCCCCCeEecccccceecC-----CcCCcCCCCCC
Q 039957 152 NPLGGILPPSIGN----FSTSLQRFSASECKLKGT----IPKEIGHLRGLIYLSLGFNDLNGTI-----PTSIGTLKQLQ 218 (481)
Q Consensus 152 N~l~~~~p~~~~~----~~~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~-----p~~~~~l~~L~ 218 (481)
|.++...+..+.. ..++|++|++++|.++.. ++..+..+++|++|++++|.++... +..+..+++|+
T Consensus 180 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~ 259 (461)
T 1z7x_W 180 NDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR 259 (461)
T ss_dssp SBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCC
T ss_pred CCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCce
Confidence 8887654444432 124788888888888753 4666777888888888888876432 23334577888
Q ss_pred eeecCCCcCCCC----CCccccCccCCCeeecCCCeeeecCCccccc-----CCCCCcEEcCCCcCccc----CCcchhc
Q 039957 219 GFFLPETNLQGY----VPHNLCHLEMLNLLHLGGNKLSGHIPPCLAS-----LTSLRELDLGSNKLTSS----IPSSLWS 285 (481)
Q Consensus 219 ~l~l~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~~----~p~~~~~ 285 (481)
.|++++|.++.. ++..+..+++|+.|++++|.+++..+..+.. .++|++|++++|.+++. ++..+..
T Consensus 260 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 339 (461)
T 1z7x_W 260 TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQ 339 (461)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHH
T ss_pred EEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhh
Confidence 888888888764 4566667788888888888886544444433 26888888888888765 4556667
Q ss_pred cccCcEEEccCcccCCCCCCcccc-----CCcCcEEEccCCeeee----eccccccccCChhhhhcccc
Q 039957 286 LGYILEINLSSNLLNDSLPSNVQK-----LKVLRVLDLSRNQLSG----DIPSTIGALVDLETISLAGS 345 (481)
Q Consensus 286 l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~l~~~g~ 345 (481)
++.|++|++++|.+.+..+..+.. .+.|++|++++|++++ .+|..+..+++|++|+++++
T Consensus 340 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 340 NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp CSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred CCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCC
Confidence 788888888888887654444432 5688888888888875 66777778888888887765
No 52
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.8e-32 Score=265.19 Aligned_cols=283 Identities=19% Similarity=0.217 Sum_probs=230.4
Q ss_pred hCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCc
Q 039957 10 GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLI 89 (481)
Q Consensus 10 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 89 (481)
..++.....++++|+++.+ |..+. ++|++|++++|++++ +|...+..+++|++|++++|++++..|..|.++++|+
T Consensus 28 ~~C~~~~~c~~~~~~l~~i-P~~~~--~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLNSI-PSGLT--EAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp CEECTTSEEECCSTTCSSC-CTTCC--TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCCCeEeeCCCCCcccc-ccccc--ccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 3445566789999999864 55544 589999999999984 5553334799999999999999988888999999999
Q ss_pred eeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCC-ccceeCChhhhhcccC
Q 039957 90 ILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGN-PLGGILPPSIGNFSTS 168 (481)
Q Consensus 90 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~~~~~ 168 (481)
+|++++|.+++..+..|+++++|++|++++|+++.++.. ..+.++++|++|++++| .+++..+..+..+ ++
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~-------~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l-~~ 175 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET-------SLFSHLTKLQILRVGNMDTFTKIQRKDFAGL-TF 175 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSS-------CSCTTCTTCCEEEEEESSSCCEECTTTTTTC-CE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCch-------hhhccCCCCcEEECCCCccccccCHHHccCC-CC
Confidence 999999999987777799999999999999999876541 23567889999999999 5777767777776 68
Q ss_pred ccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCcccc---CccCCCeee
Q 039957 169 LQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLC---HLEMLNLLH 245 (481)
Q Consensus 169 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~---~l~~L~~L~ 245 (481)
|++|++++|.+++..|..+..+++|++|++++|.+....+..+..+++|+.|++++|.+++..+..+. ....++.++
T Consensus 176 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~ 255 (353)
T 2z80_A 176 LEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFT 255 (353)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEE
T ss_pred CCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccc
Confidence 99999999999998899999999999999999998654444455688999999999999987665543 356678888
Q ss_pred cCCCeeee----cCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCC
Q 039957 246 LGGNKLSG----HIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLP 304 (481)
Q Consensus 246 L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 304 (481)
++++.+++ .+|..+..+++|+.|++++|+++...+..+..++.|++|++++|++.+..|
T Consensus 256 L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 256 FRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp EESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 88888775 367788999999999999999994444446899999999999999987544
No 53
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.9e-31 Score=252.25 Aligned_cols=224 Identities=22% Similarity=0.189 Sum_probs=124.0
Q ss_pred CEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEccc
Q 039957 40 RNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLM 119 (481)
Q Consensus 40 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 119 (481)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|.+++..|..|.++++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 45555566555 455432 24566666666666655555566666666666666666665566666666666666666
Q ss_pred cc-CccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEec
Q 039957 120 NN-LTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSL 198 (481)
Q Consensus 120 N~-l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 198 (481)
|. ++.+.+ ..+..+++|++|++++|.+++..|..+..+ ++|++|++++|.+++..+..+..+++|++|++
T Consensus 90 n~~l~~~~~--------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 90 NAQLRSVDP--------ATFHGLGRLHTLHLDRCGLQELGPGLFRGL-AALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp CTTCCCCCT--------TTTTTCTTCCEEECTTSCCCCCCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCccccCH--------HHhcCCcCCCEEECCCCcCCEECHhHhhCC-cCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 64 544422 223445555555555555554444444443 34555555555555444444555556666666
Q ss_pred ccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCc
Q 039957 199 GFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 199 ~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
++|++++..+..|..+++|+.|++++|.+++..|..|..+++|+.|++++|++++.++..+..+++|+.|++++|.+.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 666655544444555555555555555555555555555555555555555555544444555555555555555554
No 54
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=4.7e-31 Score=254.32 Aligned_cols=233 Identities=20% Similarity=0.222 Sum_probs=154.6
Q ss_pred cCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEE
Q 039957 37 STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLS 116 (481)
Q Consensus 37 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 116 (481)
++++.|+|++|.++ .+|..++ .+++|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..|+++++|++|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~-~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAF-RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGG-GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCCch-hcChhhh-hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 44555555555554 4454444 3555555555555554 44555555555555555555555 3455555555555555
Q ss_pred cccccCccccCCCc-cccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCe
Q 039957 117 LLMNNLTTESSSAY-QWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIY 195 (481)
Q Consensus 117 L~~N~l~~~~~~~~-~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 195 (481)
+++|++.+..+..+ .......+.++++|++|+|++|.++ .+|..++.+ ++|++|++++|.+++ +|..+..+++|++
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l-~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANL-QNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGC-TTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCC-CCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 55544333211111 0011122345677777777777777 667777766 478888888888874 6667888888888
Q ss_pred EecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcC
Q 039957 196 LSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKL 275 (481)
Q Consensus 196 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 275 (481)
|++++|.+.+.+|..++.+++|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.+++..|.+
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888887766
Q ss_pred c
Q 039957 276 T 276 (481)
Q Consensus 276 ~ 276 (481)
.
T Consensus 314 ~ 314 (328)
T 4fcg_A 314 A 314 (328)
T ss_dssp C
T ss_pred H
Confidence 5
No 55
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.8e-30 Score=260.43 Aligned_cols=249 Identities=27% Similarity=0.320 Sum_probs=152.1
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
..+.++.+++.++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.++++.|..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 3567777777776 6776543 57788888888888777778888888888888888888777778888888888888
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCC-ceeecCCcccccCCCCCeE
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASEC-KLKGTIPKEIGHLRGLIYL 196 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L 196 (481)
++|+++.++... +..+++|++|+|++|++++..+..|..+ ++|++|++++| .+....+..|.++++|++|
T Consensus 131 ~~n~l~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 131 FDNWLTVIPSGA--------FEYLSKLRELWLRNNPIESIPSYAFNRV-PSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp CSSCCSBCCTTT--------SSSCTTCCEEECCSCCCCEECTTTTTTC-TTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred CCCcCCccChhh--------hcccCCCCEEECCCCCcceeCHhHHhcC-CcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 888877664432 4566677777777777765544444444 35556665552 3332222344555555555
Q ss_pred ecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCc
Q 039957 197 SLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 197 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
++++|++++. | .+..+++|+.|++++|++++..|..|..+++|+.|++++|+++
T Consensus 202 ~L~~n~l~~~-~-------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 255 (452)
T 3zyi_A 202 NLGMCNIKDM-P-------------------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS 255 (452)
T ss_dssp ECTTSCCSSC-C-------------------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccccc-c-------------------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCc
Confidence 5555555422 2 2344445555555555555555555555555555555555555
Q ss_pred ccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeee
Q 039957 277 SSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSG 325 (481)
Q Consensus 277 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 325 (481)
+..|..|..++.|+.|++++|++++..+..+..+++|+.|++++|++.+
T Consensus 256 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 256 LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred eECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 5555555555555555555555555444555555566666666666554
No 56
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=3.7e-30 Score=258.65 Aligned_cols=249 Identities=26% Similarity=0.303 Sum_probs=148.5
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
..+.++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.++++.+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 3567778888887 7777653 57788888888888777778888888888888888888777778888888888888
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCC-ceeecCCcccccCCCCCeE
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASEC-KLKGTIPKEIGHLRGLIYL 196 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L 196 (481)
++|+++.++.. .+..+++|++|+|++|++++..+..|..+ ++|++|++++| .+....+..|.++++|++|
T Consensus 120 ~~n~l~~~~~~--------~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 120 FDNRLTTIPNG--------AFVYLSKLKELWLRNNPIESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp CSSCCSSCCTT--------TSCSCSSCCEEECCSCCCCEECTTTTTTC-TTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred CCCcCCeeCHh--------HhhccccCceeeCCCCcccccCHHHhhhC-cccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 88888766443 24566777777777777765555455544 45666666653 2332233345555555555
Q ss_pred ecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCc
Q 039957 197 SLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 197 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
++++|+++ .+| .+..+++| +.|+|++|++++..|..|..+++|+.|++++|+++
T Consensus 191 ~L~~n~l~-~~~-~~~~l~~L------------------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 191 NLAMCNLR-EIP-NLTPLIKL------------------------DELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp ECTTSCCS-SCC-CCTTCSSC------------------------CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred cCCCCcCc-ccc-ccCCCccc------------------------CEEECCCCccCccChhhhccCccCCEEECCCCcee
Confidence 55555554 222 23444444 44444444444444444444444444444444444
Q ss_pred ccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeee
Q 039957 277 SSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSG 325 (481)
Q Consensus 277 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 325 (481)
+..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|++.+
T Consensus 245 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 245 VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp EECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred EEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 4444444444444444444444444444444445555555555555543
No 57
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.4e-30 Score=251.10 Aligned_cols=226 Identities=22% Similarity=0.226 Sum_probs=166.0
Q ss_pred CCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCC
Q 039957 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTN 140 (481)
Q Consensus 61 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 140 (481)
.+++++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..|+++++|++|+|++|.++.++ ..+.+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp---------~~l~~ 148 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALP---------ASIAS 148 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCC---------GGGGG
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCc---------HHHhc
Confidence 467777777777776 66666777777777777777777 67777777777777777777776442 33556
Q ss_pred CCCCcEEEccCCccceeCChhhhh---------cccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCC
Q 039957 141 CRYLVYLILSGNPLGGILPPSIGN---------FSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSI 211 (481)
Q Consensus 141 l~~L~~L~Ls~N~l~~~~p~~~~~---------~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 211 (481)
+++|++|+|++|++.+.+|..+.. + ++|++|++++|+++ .+|..+..+++|++|++++|++++ +|..+
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l-~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l 225 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGL-VNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAI 225 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES-TTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccC-CCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhh
Confidence 777777777777777777766543 3 56777777777777 667777777777777777777774 55567
Q ss_pred cCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcE
Q 039957 212 GTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILE 291 (481)
Q Consensus 212 ~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 291 (481)
..+++|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|++.+.+|..+..++.++.
T Consensus 226 ~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~ 305 (328)
T 4fcg_A 226 HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCI 305 (328)
T ss_dssp GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCE
T ss_pred ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceE
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred EEccCcccC
Q 039957 292 INLSSNLLN 300 (481)
Q Consensus 292 L~l~~N~l~ 300 (481)
+++..|.+.
T Consensus 306 l~l~~~~~~ 314 (328)
T 4fcg_A 306 ILVPPHLQA 314 (328)
T ss_dssp EECCGGGSC
T ss_pred EeCCHHHHH
Confidence 777766554
No 58
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=5.1e-32 Score=260.15 Aligned_cols=258 Identities=17% Similarity=0.148 Sum_probs=160.9
Q ss_pred CCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeec
Q 039957 14 NLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDL 93 (481)
Q Consensus 14 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 93 (481)
.++.++++.+.+....+..+..+++|++|+|++|++++..|..+. .+++|++|+|++|++++..| +..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLA-PFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHT-TCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhh-CCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 456667777777666666666677777777777777744344443 67777777777777776554 777777777777
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEE
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFS 173 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~ 173 (481)
++|.+++.. ..++|++|++++|++++++.. .+++|++|++++|++++..+..+..+ ++|++|+
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~-----------~~~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~ 150 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCS-----------RGQGKKNIYLANNKITMLRDLDEGCR-SRVQYLD 150 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC-----------CCSSCEEEECCSSCCCSGGGBCTGGG-SSEEEEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCcc-----------ccCCCCEEECCCCCCCCccchhhhcc-CCCCEEE
Confidence 777777533 236777777777777665321 24557777777777766555555554 4677777
Q ss_pred ccCCceeecCCcccc-cCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeee
Q 039957 174 ASECKLKGTIPKEIG-HLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 174 l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 252 (481)
+++|.+++..|..+. .+++|++|++++|.+++..+ ...+++|+.|++++|++++.. ..+..+++|+.|++++|+++
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc
Confidence 777777665555553 56667777777776664421 223566666666666666533 33556666666666666665
Q ss_pred ecCCcccccCCCCCcEEcCCCcCc-ccCCcchhccccCcEEEcc
Q 039957 253 GHIPPCLASLTSLRELDLGSNKLT-SSIPSSLWSLGYILEINLS 295 (481)
Q Consensus 253 ~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~l~ 295 (481)
+ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 228 ~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 228 L-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp E-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred c-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 3 3445556666666666666665 4455555555555555554
No 59
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=6.9e-30 Score=257.60 Aligned_cols=245 Identities=21% Similarity=0.190 Sum_probs=182.5
Q ss_pred ccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCC
Q 039957 64 IKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRY 143 (481)
Q Consensus 64 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~ 143 (481)
.+.++.+++.++ .+|..+. ++|++|+|++|.++++.|..|.++++|++|+|++|+++++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~------------------ 114 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQI------------------ 114 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE------------------
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCc------------------
Confidence 455666666665 3444332 4566666666666666666666666666666666665554
Q ss_pred CcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecC
Q 039957 144 LVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLP 223 (481)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 223 (481)
.|..|..+ ++|++|++++|++++..+..|..+++|++|++++|+++...+..|..+++|+.|+++
T Consensus 115 --------------~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 179 (452)
T 3zyi_A 115 --------------EVGAFNGL-ASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLG 179 (452)
T ss_dssp --------------CTTTTTTC-TTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECC
T ss_pred --------------ChhhccCc-ccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCC
Confidence 33333333 344555555555554444556667777777777777776666677777777777777
Q ss_pred C-CcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCC
Q 039957 224 E-TNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDS 302 (481)
Q Consensus 224 ~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 302 (481)
+ +.+....+..|..+++|+.|++++|++++. | .+..+++|+.|++++|++++..|..|..++.|+.|++++|++++.
T Consensus 180 ~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 180 ELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred CCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 7 344444455788899999999999999864 4 588999999999999999999999999999999999999999999
Q ss_pred CCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhccccc
Q 039957 303 LPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 303 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~g~~ 346 (481)
.|..|..+++|+.|++++|++++..+..+..+.+|+.|++.++.
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np 301 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 301 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSC
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCC
Confidence 99999999999999999999998888889999999999988764
No 60
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=7.1e-30 Score=256.63 Aligned_cols=248 Identities=22% Similarity=0.230 Sum_probs=212.5
Q ss_pred CCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeec
Q 039957 14 NLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDL 93 (481)
Q Consensus 14 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 93 (481)
..+.++.+++.++. +|..+. ++++.|+|++|++++..+..+ ..+++|++|+|++|++++..+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~-~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTT-SSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHh-hCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 46788889988875 455443 678999999999985555555 48999999999999999888889999999999999
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCc-cceeCChhhhhcccCccEE
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNP-LGGILPPSIGNFSTSLQRF 172 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~~~~~L~~L 172 (481)
++|++++..+..|..+++|++|+|++|.++.++.. .+.++++|++|+|++|. ++...+..|..+ ++|++|
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~--------~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l-~~L~~L 190 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSY--------AFNRIPSLRRLDLGELKRLSYISEGAFEGL-SNLRYL 190 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTT--------TTTTCTTCCEEECCCCTTCCEECTTTTTTC-SSCCEE
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHH--------HhhhCcccCEeCCCCCCCcceeCcchhhcc-cccCee
Confidence 99999988788899999999999999999887543 35678899999999954 444444456665 689999
Q ss_pred EccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeee
Q 039957 173 SASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 173 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 252 (481)
++++|+++ .+| .+..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|+++
T Consensus 191 ~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 99999998 455 4788999999999999999998999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccCCCCCcEEcCCCcCc
Q 039957 253 GHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 253 ~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
+..+..|..+++|+.|++++|.+.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ccChhHhccccCCCEEEcCCCCcc
Confidence 888888999999999999999875
No 61
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=1.7e-32 Score=263.46 Aligned_cols=258 Identities=20% Similarity=0.168 Sum_probs=170.1
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
+++.++++.+.+. ..+..++..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..| |..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 3455566677765 4444455566788888888888887777778888888888888888876554 777888888888
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEe
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLS 197 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 197 (481)
++|++++++ ..++|++|++++|++++..+..+ ++|++|++++|++++..|..+..+++|++|+
T Consensus 88 s~n~l~~l~-------------~~~~L~~L~l~~n~l~~~~~~~~----~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 88 NNNYVQELL-------------VGPSIETLHAANNNISRVSCSRG----QGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp CSSEEEEEE-------------ECTTCCEEECCSSCCSEEEECCC----SSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred cCCcccccc-------------CCCCcCEEECCCCccCCcCcccc----CCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 888777652 12457777777777665433221 3455555555555544444444455555555
Q ss_pred cccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccc-cCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCc
Q 039957 198 LGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNL-CHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 198 l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
+++|.+ ++..+..+ ..+++|+.|++++|++++..+ ...+++|++|++++|+++
T Consensus 151 Ls~N~l------------------------~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 151 LKLNEI------------------------DTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp CTTSCC------------------------CEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCC
T ss_pred CCCCCC------------------------CcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCC
Confidence 555554 44444443 245566666666666665422 223667777777777776
Q ss_pred ccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeee-eeccccccccCChhhhhcc
Q 039957 277 SSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLS-GDIPSTIGALVDLETISLA 343 (481)
Q Consensus 277 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~l~~~ 343 (481)
+. |..+..++.|+.|++++|+++. +|..+..+++|+.|++++|++. +..|..+..++.|+.+++.
T Consensus 205 ~l-~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 205 FM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred cc-hhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 43 3346777777777777777764 5667788888999999999988 6677888888888888765
No 62
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=5e-32 Score=259.57 Aligned_cols=252 Identities=21% Similarity=0.157 Sum_probs=139.5
Q ss_pred ccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccc-eeecchhcc-------ccccCceeecccCcceecCcc
Q 039957 33 IFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL-IGTIPNSIT-------NATKLIILDLGFNTFSGHIPN 104 (481)
Q Consensus 33 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 104 (481)
++..++|+.|++++|.+ .+|..++.. |++|+|++|++ .+.+|..+. ++++|++|+|++|.+++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 34444555555555555 455544421 55555555555 233444433 455555555555555555555
Q ss_pred cc--cCCCCCCEEEcccccCccccCCCccccccccCC--CCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCcee
Q 039957 105 TF--GNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLT--NCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLK 180 (481)
Q Consensus 105 ~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~ 180 (481)
.+ +.+++|++|++++|++++.+ ..+ ..+. .+++|++|+|++|++++..|..++.+ ++|++|++++|++.
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~~-~~~-----~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~ 186 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATRD-AWL-----AELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF-PALSTLDLSDNPEL 186 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSSS-SHH-----HHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC-SSCCEEECCSCTTC
T ss_pred HHHHhcCCCccEEEccCCCCcchh-HHH-----HHHHHhhcCCCcEEEeeCCCCccchHHHhccC-CCCCEEECCCCCcC
Confidence 44 55555555555555555541 111 0000 11455666666666655555555554 35666666666554
Q ss_pred ec--CCccc--ccCCCCCeEeccccccee---cCCcCCcCCCCCCeeecCCCcCCCCCC-ccccCccCCCeeecCCCeee
Q 039957 181 GT--IPKEI--GHLRGLIYLSLGFNDLNG---TIPTSIGTLKQLQGFFLPETNLQGYVP-HNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 181 ~~--~p~~~--~~l~~L~~L~l~~N~l~~---~~p~~~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 252 (481)
+. .|..+ ..+++|++|++++|++++ .....+..+++|+.|++++|++++..| ..+..+++|+.|++++|+++
T Consensus 187 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 187 GERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred cchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 43 22223 556666666666666652 111223455666666666666666554 34455667777777777776
Q ss_pred ecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCC
Q 039957 253 GHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLND 301 (481)
Q Consensus 253 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 301 (481)
.+|..+. ++|++|++++|++++. |. +..++.|++|++++|++++
T Consensus 267 -~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 267 -QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 4555554 6677777777777654 44 6667777777777777654
No 63
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.1e-33 Score=284.17 Aligned_cols=317 Identities=21% Similarity=0.203 Sum_probs=250.4
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhcc-CCc----CCCEEEeeCCcCcc----ccChhhhcCCCCccEEEccCccc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIF-NIS----TIRNLNLGGNRLSG----HLPSMIGHSLPNIKYLELGDNNL 74 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~----~L~~L~L~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l 74 (481)
.+|..+..+++|++|+|++|+++...+..+. .++ +|++|+|++|+++. .+|..+. .+++|++|++++|.+
T Consensus 47 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~-~~~~L~~L~Ls~n~i 125 (461)
T 1z7x_W 47 DISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR-TLPTLQELHLSDNLL 125 (461)
T ss_dssp HHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTT-SCTTCCEEECCSSBC
T ss_pred HHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHc-cCCceeEEECCCCcC
Confidence 4567788999999999999999875554443 455 69999999999983 4576665 799999999999998
Q ss_pred eeecchhccc-----cccCceeecccCcceec----CcccccCCCCCCEEEcccccCccccCCCccccccccCC-CCCCC
Q 039957 75 IGTIPNSITN-----ATKLIILDLGFNTFSGH----IPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLT-NCRYL 144 (481)
Q Consensus 75 ~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~-~l~~L 144 (481)
+...+..+.. .++|++|++++|.+++. ++..+..+++|++|++++|.++......+ ...+. ..++|
T Consensus 126 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l----~~~l~~~~~~L 201 (461)
T 1z7x_W 126 GDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVL----CQGLKDSPCQL 201 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHH----HHHHHHSCCCC
T ss_pred chHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHH----HHHHhcCCCCc
Confidence 7655554433 56899999999999874 46677889999999999999876422111 01111 34589
Q ss_pred cEEEccCCcccee----CChhhhhcccCccEEEccCCceeecC-----CcccccCCCCCeEecccccceec----CCcCC
Q 039957 145 VYLILSGNPLGGI----LPPSIGNFSTSLQRFSASECKLKGTI-----PKEIGHLRGLIYLSLGFNDLNGT----IPTSI 211 (481)
Q Consensus 145 ~~L~Ls~N~l~~~----~p~~~~~~~~~L~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~~~ 211 (481)
++|++++|.+++. ++..+..+ ++|++|++++|.++... +..+..+++|++|++++|.++.. ++..+
T Consensus 202 ~~L~L~~n~l~~~~~~~l~~~l~~~-~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 280 (461)
T 1z7x_W 202 EALKLESCGVTSDNCRDLCGIVASK-ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVL 280 (461)
T ss_dssp CEEECTTSCCBTTHHHHHHHHHHHC-TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHH
T ss_pred eEEEccCCCCcHHHHHHHHHHHHhC-CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHH
Confidence 9999999999863 45556655 68999999999987532 22334588999999999999864 57778
Q ss_pred cCCCCCCeeecCCCcCCCCCCccccC-----ccCCCeeecCCCeeeec----CCcccccCCCCCcEEcCCCcCcccCCcc
Q 039957 212 GTLKQLQGFFLPETNLQGYVPHNLCH-----LEMLNLLHLGGNKLSGH----IPPCLASLTSLRELDLGSNKLTSSIPSS 282 (481)
Q Consensus 212 ~~l~~L~~l~l~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 282 (481)
..+++|+.|++++|.+....+..+.. .++|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..
T Consensus 281 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 360 (461)
T 1z7x_W 281 RAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE 360 (461)
T ss_dssp HHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH
T ss_pred hhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHH
Confidence 88999999999999987654444433 26899999999999865 4567778899999999999998765555
Q ss_pred hhc-----cccCcEEEccCcccCC----CCCCccccCCcCcEEEccCCeeeee
Q 039957 283 LWS-----LGYILEINLSSNLLND----SLPSNVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 283 ~~~-----l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~ 326 (481)
+.. .+.|++|++++|.+++ .+|..+..+++|++|++++|++++.
T Consensus 361 l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 361 LCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 543 5799999999999986 6788888999999999999999854
No 64
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=5e-30 Score=242.54 Aligned_cols=254 Identities=22% Similarity=0.218 Sum_probs=163.7
Q ss_pred cEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCC
Q 039957 65 KYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYL 144 (481)
Q Consensus 65 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L 144 (481)
++++.+++.++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.++++.+ ..+.++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~--------~~~~~l~~L 82 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDA--------AAFTGLALL 82 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECT--------TTTTTCTTC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCH--------hhcCCccCC
Confidence 67888888886 455543 4678888888888888777888888888888888888877643 335667778
Q ss_pred cEEEccCCc-cceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecC
Q 039957 145 VYLILSGNP-LGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLP 223 (481)
Q Consensus 145 ~~L~Ls~N~-l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 223 (481)
++|++++|. ++...|..+..+ ++|++|++++|.+++..|..+..+++|++|++++|++++..+..|..+++|+.|+++
T Consensus 83 ~~L~l~~n~~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 161 (285)
T 1ozn_A 83 EQLDLSDNAQLRSVDPATFHGL-GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH 161 (285)
T ss_dssp CEEECCSCTTCCCCCTTTTTTC-TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEeCCCCCCccccCHHHhcCC-cCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECC
Confidence 888888886 665555556554 467777777777766666666666777777777776665555556666666666666
Q ss_pred CCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCC
Q 039957 224 ETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSL 303 (481)
Q Consensus 224 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 303 (481)
+|++++..+..|..+++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..++.|++|++++|.+....
T Consensus 162 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 162 GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 66666655555666666666666666666666666666666666666666666554455555666666666666654322
Q ss_pred CCccccCCcCcEEEccCCeeeeeccccc
Q 039957 304 PSNVQKLKVLRVLDLSRNQLSGDIPSTI 331 (481)
Q Consensus 304 p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 331 (481)
+.. .-...++.+..+.+.+.+..|..+
T Consensus 242 ~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 242 RAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp GGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred CcH-HHHHHHHhcccccCccccCCchHh
Confidence 210 011122333344555555555544
No 65
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=3.6e-29 Score=259.33 Aligned_cols=270 Identities=26% Similarity=0.344 Sum_probs=226.6
Q ss_pred CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceee
Q 039957 13 QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILD 92 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 92 (481)
.++++|++++|.++ .+|..+. ++|++|++++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 46899999999998 4566554 79999999999998 6776 47899999999999984 555 679999999
Q ss_pred cccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEE
Q 039957 93 LGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRF 172 (481)
Q Consensus 93 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 172 (481)
+++|.+++. |. .+++|+.|++++|+++.++. .+++|++|+|++|.+++ +|.. ..+|+.|
T Consensus 108 Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~lp~------------~l~~L~~L~Ls~N~l~~-l~~~----~~~L~~L 166 (622)
T 3g06_A 108 IFSNPLTHL-PA---LPSGLCKLWIFGNQLTSLPV------------LPPGLQELSVSDNQLAS-LPAL----PSELCKL 166 (622)
T ss_dssp ECSCCCCCC-CC---CCTTCCEEECCSSCCSCCCC------------CCTTCCEEECCSSCCSC-CCCC----CTTCCEE
T ss_pred CcCCcCCCC-CC---CCCCcCEEECCCCCCCcCCC------------CCCCCCEEECcCCcCCC-cCCc----cCCCCEE
Confidence 999999964 44 67899999999999998743 23789999999999986 3432 3579999
Q ss_pred EccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeee
Q 039957 173 SASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 173 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 252 (481)
++++|.+++ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. +|.. +++|+.|++++|+++
T Consensus 167 ~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~ 234 (622)
T 3g06_A 167 WAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT 234 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS
T ss_pred ECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccC
Confidence 999999995 66 457899999999999985 5543 4789999999999986 4433 478999999999999
Q ss_pred ecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecccccc
Q 039957 253 GHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIG 332 (481)
Q Consensus 253 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 332 (481)
+ +| ..+++|+.|++++|+++ .+|. .+++|+.|++++|.++ .+|..+.++++|+.|++++|++++..|..+.
T Consensus 235 ~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 235 S-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp C-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred c-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 6 45 45689999999999998 4555 5688999999999998 6788999999999999999999998888776
Q ss_pred ccCC
Q 039957 333 ALVD 336 (481)
Q Consensus 333 ~l~~ 336 (481)
.+..
T Consensus 306 ~L~~ 309 (622)
T 3g06_A 306 EITS 309 (622)
T ss_dssp HHHH
T ss_pred hccc
Confidence 5543
No 66
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=5.1e-31 Score=252.56 Aligned_cols=250 Identities=19% Similarity=0.154 Sum_probs=210.6
Q ss_pred CCCCccEEEccCccceeecchhccccccCceeecccCcc-eecCccccc-------CCCCCCEEEcccccCccccCCCcc
Q 039957 60 SLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTF-SGHIPNTFG-------NLRHLSVLSLLMNNLTTESSSAYQ 131 (481)
Q Consensus 60 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~ 131 (481)
..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|++++|++++..+..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~- 115 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL- 115 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS-
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH-
Confidence 567899999999999 777776655 99999999999 456777776 89999999999999997532221
Q ss_pred ccccccCCCCCCCcEEEccCCccceeCChhhhhcc----cCccEEEccCCceeecCCcccccCCCCCeEecccccceec-
Q 039957 132 WSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS----TSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGT- 206 (481)
Q Consensus 132 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~- 206 (481)
.+..+++|++|+|++|++++. |..+..+. ++|++|++++|++++..|..|+.+++|++|++++|++.+.
T Consensus 116 -----~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 116 -----LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp -----SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred -----HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 026789999999999999987 88777762 6899999999999988889999999999999999998765
Q ss_pred -CCcCC--cCCCCCCeeecCCCcCCCC---CCccccCccCCCeeecCCCeeeecCC-cccccCCCCCcEEcCCCcCcccC
Q 039957 207 -IPTSI--GTLKQLQGFFLPETNLQGY---VPHNLCHLEMLNLLHLGGNKLSGHIP-PCLASLTSLRELDLGSNKLTSSI 279 (481)
Q Consensus 207 -~p~~~--~~l~~L~~l~l~~n~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~ 279 (481)
.|..+ ..+++|+.|++++|++++. ....+..+++|+.|++++|++++.+| ..+..+++|++|++++|+++ .+
T Consensus 190 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~i 268 (312)
T 1wwl_A 190 GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QV 268 (312)
T ss_dssp HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SC
T ss_pred HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hh
Confidence 33344 8899999999999999842 22345678899999999999998775 56777899999999999998 77
Q ss_pred CcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeee
Q 039957 280 PSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSG 325 (481)
Q Consensus 280 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 325 (481)
|..+. +.|++|++++|++++. |. +..+++|++|++++|++++
T Consensus 269 p~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 269 PKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 77776 8899999999999876 66 8899999999999999875
No 67
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=4e-30 Score=261.02 Aligned_cols=234 Identities=19% Similarity=0.179 Sum_probs=154.4
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
+|++|+|++|.+++..|..+. .+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLA-PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGT-TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHh-CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 677777777777644444443 67777777777777766555 6677777777777777765432 267777777
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccc-cCCCCCeE
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIG-HLRGLIYL 196 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L 196 (481)
++|.+++++.. .+++|++|+|++|.+++..|..++.+ ++|+.|++++|.+++..|..+. .+++|++|
T Consensus 107 ~~N~l~~~~~~-----------~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 107 ANNNISRVSCS-----------RGQGKKNIYLANNKITMLRDLDEGCR-SRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp CSSCCCCEEEC-----------CCSSCEEEECCSSCCCSGGGBCGGGG-SSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred cCCcCCCCCcc-----------ccCCCCEEECCCCCCCCCCchhhcCC-CCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 77777665321 23567777777777776666666655 4677777777777776666665 57777777
Q ss_pred ecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCc
Q 039957 197 SLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 197 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
+|++|.+++..+ +..+++|+.|++++|.+++.+| .+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 175 ~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 175 NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 777777775532 3346777777777777776443 36677777777777777775 4556777777777777777776
Q ss_pred -ccCCcchhccccCcEEEcc
Q 039957 277 -SSIPSSLWSLGYILEINLS 295 (481)
Q Consensus 277 -~~~p~~~~~l~~L~~L~l~ 295 (481)
+.+|..+..++.++.++++
T Consensus 251 c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 251 CGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred CcchHHHHHhCCCCcEEecc
Confidence 5555666666666655554
No 68
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.96 E-value=4.3e-30 Score=242.57 Aligned_cols=135 Identities=30% Similarity=0.523 Sum_probs=118.0
Q ss_pred hccccccceeeeecc------CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCC
Q 039957 341 SLAGSFGSVYKGTIS------DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~------~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
.|+|+||.||+|... +|..||||.++.......++|.+|++++++++|||||+++|+|.+.+ +|||++|
T Consensus 21 lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G 100 (299)
T 4asz_A 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100 (299)
T ss_dssp EEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred EeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCC
Confidence 478999999999853 46789999998766666678999999999999999999999998765 7899999
Q ss_pred ChhHHhhcC------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 410 SLEKRLYSH------------NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 410 ~l~~~l~~~------------~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
+|.++++.. ...++|.++.+|+.|||+||+||| +++||||||||+|||+|+++.+||+|||+|+
T Consensus 101 ~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~ 176 (299)
T 4asz_A 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176 (299)
T ss_dssp BHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred cHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCccCHhhEEECCCCcEEECCcccce
Confidence 999999753 246899999999999999999999 5789999999999999999999999999997
Q ss_pred cC
Q 039957 478 LL 479 (481)
Q Consensus 478 ~~ 479 (481)
..
T Consensus 177 ~~ 178 (299)
T 4asz_A 177 DV 178 (299)
T ss_dssp HH
T ss_pred ec
Confidence 54
No 69
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.96 E-value=9.6e-30 Score=240.20 Aligned_cols=133 Identities=31% Similarity=0.572 Sum_probs=117.8
Q ss_pred hccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~~ 414 (481)
.|+|+||.||+|.+.. .||||.++... ....+.|.+|+.++++++|||||+++|+|.... +|||++|+|.++
T Consensus 44 iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGsL~~~ 121 (307)
T 3omv_A 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKH 121 (307)
T ss_dssp CCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHHH
T ss_pred EeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCCCHHHH
Confidence 4899999999998643 59999886543 334567999999999999999999999997654 789999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++.....++|.++.+|+.|||+||+||| +.+||||||||+|||+|+++.+||+|||+|+..
T Consensus 122 l~~~~~~l~~~~~~~i~~qia~gL~yLH----~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 122 LHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp HHTSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred HhhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 9876677999999999999999999999 578999999999999999999999999999865
No 70
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=243.14 Aligned_cols=135 Identities=28% Similarity=0.497 Sum_probs=115.9
Q ss_pred hccccccceeeeecc------CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCC
Q 039957 341 SLAGSFGSVYKGTIS------DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~------~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
.|+|+||.||+|.+. ++..||||.++.......+.|.+|++++++++|||||+++|+|.+.+ +|||++|
T Consensus 49 LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G 128 (329)
T 4aoj_A 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128 (329)
T ss_dssp EEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred EccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence 478999999999753 47889999998766666678999999999999999999999998765 7899999
Q ss_pred ChhHHhhcCC--------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccC
Q 039957 410 SLEKRLYSHN--------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGI 475 (481)
Q Consensus 410 ~l~~~l~~~~--------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl 475 (481)
+|.++++... ..++|.++++|+.|||+||+||| +.+||||||||+|||+|+++.+||+|||+
T Consensus 129 ~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLKp~NILl~~~~~~Ki~DFGl 204 (329)
T 4aoj_A 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA----GLHFVHRDLATRNCLVGQGLVVKIGDFGM 204 (329)
T ss_dssp BHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred cHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHhhEEECCCCcEEEccccc
Confidence 9999987532 35899999999999999999999 57899999999999999999999999999
Q ss_pred cccC
Q 039957 476 SKLL 479 (481)
Q Consensus 476 ~~~~ 479 (481)
|+.+
T Consensus 205 a~~~ 208 (329)
T 4aoj_A 205 SRDI 208 (329)
T ss_dssp ----
T ss_pred ceec
Confidence 9865
No 71
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.96 E-value=2.2e-29 Score=238.67 Aligned_cols=135 Identities=23% Similarity=0.413 Sum_probs=116.3
Q ss_pred hccccccceeeeecc------CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS------DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.|+|+||.||+|.+. ++..||||.+.... ....+.|.+|+.++++++|||||+++|+|...+ +|||++
T Consensus 34 lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~ 113 (308)
T 4gt4_A 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113 (308)
T ss_dssp EEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSS
T ss_pred eccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCC
Confidence 478999999999863 46789999986543 233467999999999999999999999998764 789999
Q ss_pred CChhHHhhcC---------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccc
Q 039957 409 GSLEKRLYSH---------------NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDF 473 (481)
Q Consensus 409 g~l~~~l~~~---------------~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Df 473 (481)
|+|.+++... ...++|.++++|+.|||+||+||| +.+||||||||+|||+|+++.+||+||
T Consensus 114 G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS----SHHVVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCS
T ss_pred CcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCccccceEECCCCCEEECCc
Confidence 9999998642 135889999999999999999999 578999999999999999999999999
Q ss_pred cCcccC
Q 039957 474 GISKLL 479 (481)
Q Consensus 474 gl~~~~ 479 (481)
|+|+.+
T Consensus 190 Glar~~ 195 (308)
T 4gt4_A 190 GLFREV 195 (308)
T ss_dssp CCBCGG
T ss_pred ccceec
Confidence 999864
No 72
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=8.5e-28 Score=249.04 Aligned_cols=255 Identities=26% Similarity=0.345 Sum_probs=213.2
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+. ++|++|+|++|+|+.+ |. .+++|++|+|++|+|+ .+|. .+++|++|++++|++++ +|.
T Consensus 54 ~lp~~l~--~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~--- 118 (622)
T 3g06_A 54 TLPDCLP--AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLT-SLPV----LPPGLLELSIFSNPLTH-LPA--- 118 (622)
T ss_dssp CCCSCCC--TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCS-CCCC----CCTTCCEEEECSCCCCC-CCC---
T ss_pred ccChhhC--CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCC-cCCC----CCCCCCEEECcCCcCCC-CCC---
Confidence 5777665 7999999999999865 44 5789999999999998 6776 57999999999999985 444
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
.+++|+.|++++|.+++ +|.. +++|++|++++|++++++. .+++|+.|++++|.+++ +|.
T Consensus 119 ~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~------------~~~~L~~L~L~~N~l~~-l~~--- 178 (622)
T 3g06_A 119 LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA------------LPSELCKLWAYNNQLTS-LPM--- 178 (622)
T ss_dssp CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC------------CCTTCCEEECCSSCCSC-CCC---
T ss_pred CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCC------------ccCCCCEEECCCCCCCC-Ccc---
Confidence 67899999999999996 5543 5999999999999998743 23579999999999986 452
Q ss_pred hcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCe
Q 039957 164 NFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNL 243 (481)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~ 243 (481)
..++|+.|++++|.+++ +|.. +++|+.|++++|.++ .+|.. +++|+.|++++|++++ +| ..+++|+.
T Consensus 179 -~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~ 245 (622)
T 3g06_A 179 -LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKE 245 (622)
T ss_dssp -CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCE
T ss_pred -cCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcE
Confidence 23689999999999985 5543 478999999999998 45543 4789999999999997 45 45588999
Q ss_pred eecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCC
Q 039957 244 LHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLK 311 (481)
Q Consensus 244 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 311 (481)
|++++|++++ +|. .+++|+.|++++|+++ .+|..+..++.|+.|++++|.+++..|..+..++
T Consensus 246 L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 246 LMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp EECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred EECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 9999999995 454 5689999999999999 7788999999999999999999988777665544
No 73
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=2.3e-27 Score=223.06 Aligned_cols=227 Identities=21% Similarity=0.198 Sum_probs=127.8
Q ss_pred eeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccC
Q 039957 17 SLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFN 96 (481)
Q Consensus 17 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 96 (481)
+.+.++.+++. +|..+. ++|++|++++|++++..+..+. .+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 11 ~~~c~~~~l~~-ip~~l~--~~l~~L~ls~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFF-SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCSS-CCSSSC--TTCCEEECTTCCCCEECTTTTT-TCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCccc-cCCCCC--CCccEEECCCCcccccCHhHhc-cccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 34555555543 344332 4577777777777643333443 6777777777777777666667777777777777777
Q ss_pred cceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCcccee-CChhhhhcccCccEEEcc
Q 039957 97 TFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGI-LPPSIGNFSTSLQRFSAS 175 (481)
Q Consensus 97 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~~~~~L~~L~l~ 175 (481)
.+++..|..|.++++|++|++++|+++++...+ +.++++|++|++++|.+++. +|..+..+ ++|++|+++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--------~~~l~~L~~L~l~~n~l~~~~l~~~~~~l-~~L~~L~Ls 157 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFP--------IGHLKTLKELNVAHNLIQSFKLPEYFSNL-TNLEHLDLS 157 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCC--------CTTCTTCCEEECCSSCCCCCCCCGGGGGC-TTCCEEECC
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchh--------cccCCCCCEEECcCCccceecCchhhccC-CCCCEEECC
Confidence 777776677777777777777777776653322 45566666666666666542 34444443 345555555
Q ss_pred CCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecC
Q 039957 176 ECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHI 255 (481)
Q Consensus 176 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 255 (481)
+|++++..+..+..+.+|+.+.+ .+++++|.+++..+..+.. .+|+.|++++|++++.+
T Consensus 158 ~N~l~~~~~~~~~~l~~L~~l~l--------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~ 216 (276)
T 2z62_A 158 SNKIQSIYCTDLRVLHQMPLLNL--------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVP 216 (276)
T ss_dssp SSCCCEECGGGGHHHHTCTTCCE--------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCC
T ss_pred CCCCCcCCHHHhhhhhhccccce--------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecC
Confidence 55554444444444433330000 3444444444333333322 24555555555555544
Q ss_pred CcccccCCCCCcEEcCCCcCcc
Q 039957 256 PPCLASLTSLRELDLGSNKLTS 277 (481)
Q Consensus 256 p~~~~~l~~L~~L~ls~N~l~~ 277 (481)
+..|..+++|+.|++++|.++.
T Consensus 217 ~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 217 DGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp TTTTTTCCSCCEEECCSSCBCC
T ss_pred HhHhcccccccEEEccCCcccc
Confidence 4445555555555665555553
No 74
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=4.5e-27 Score=221.12 Aligned_cols=214 Identities=19% Similarity=0.165 Sum_probs=172.2
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
.+|..+. ++|++|+|++|+++++.+..|.++++|++|++++|++++..+..+ ..+++|++|++++|++++..+..|.
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY-QSLSHLSTLILTGNPIQSLALGAFS 97 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTT-TTCTTCCEEECTTCCCCEECTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHc-cCCcCCCEEECCCCccCccChhhhc
Confidence 4666553 579999999999999988899999999999999999985444445 4899999999999999988889999
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
++++|++|++++|.+++..+..|+.+++|++|++++|.++.+. .+..+.++++|++|+|++|++++..+..+.
T Consensus 98 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-------l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 170 (276)
T 2z62_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK-------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (276)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC-------CCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec-------CchhhccCCCCCEEECCCCCCCcCCHHHhh
Confidence 9999999999999999888888999999999999999998742 124567889999999999999988777777
Q ss_pred hcccCcc----EEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCC
Q 039957 164 NFSTSLQ----RFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQG 229 (481)
Q Consensus 164 ~~~~~L~----~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 229 (481)
.+ .+++ .|++++|.+++..+..+. ..+|++|++++|++++..+..|..+++|+.+++++|.+.+
T Consensus 171 ~l-~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 171 VL-HQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp HH-HTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred hh-hhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 65 3565 778888887765544443 3367777777777765555555666666666666666654
No 75
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=5.2e-28 Score=229.71 Aligned_cols=138 Identities=25% Similarity=0.386 Sum_probs=114.6
Q ss_pred hhhhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC---------cccccC
Q 039957 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD---------FKFMPN 408 (481)
Q Consensus 338 ~~l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---------~~~~~~ 408 (481)
+...|+|+||.||+|.. +|..||||++....... ..+..|+..+.+++|||||+++|+|...+ +|||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 33458899999999987 68999999987543322 22345677778899999999999986532 689999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC----CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.++++.. .++|..+.+|+.++|+||+|||+.+ ..++||||||||+|||+|+++++||+|||+|+..
T Consensus 86 gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 86 GSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999764 4889999999999999999999531 1358999999999999999999999999999764
No 76
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.95 E-value=9.3e-28 Score=229.54 Aligned_cols=134 Identities=27% Similarity=0.414 Sum_probs=119.6
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.|+|+||.||+|.. .+|..||||++........+.+.+|+.++++++|||||++++++.+.+ +|||++|+|.++
T Consensus 82 iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~ 161 (346)
T 4fih_A 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161 (346)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHH
T ss_pred eecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence 37899999999985 468999999998766555667889999999999999999999988765 689999999998
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
+... .+++.+...++.||++||+||| +.+||||||||+|||+++++.+||+|||+|+.+.
T Consensus 162 l~~~--~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 162 VTHT--RMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp HHHS--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred HHcC--CCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 8753 4788899999999999999999 6789999999999999999999999999998753
No 77
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.94 E-value=1.9e-27 Score=227.80 Aligned_cols=136 Identities=26% Similarity=0.437 Sum_probs=113.0
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.|+|+||.||++.. .+|..||||.+.... ....+.+.+|++++++++|||||++++++.+.+ +||+++|+|.
T Consensus 32 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~ 111 (350)
T 4b9d_A 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLF 111 (350)
T ss_dssp C------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred EecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 37899999999985 468999999997653 234567889999999999999999999987765 6899999999
Q ss_pred HHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 413 KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 413 ~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
+++... ...++..+...|+.||+.||+||| +.+||||||||+|||+++++.+||+|||+|+.+.
T Consensus 112 ~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 112 KRINAQKGVLFQEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred HHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 999753 345677888899999999999999 6789999999999999999999999999998764
No 78
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=3.8e-27 Score=221.03 Aligned_cols=186 Identities=24% Similarity=0.212 Sum_probs=119.3
Q ss_pred CCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCee
Q 039957 141 CRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGF 220 (481)
Q Consensus 141 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 220 (481)
+++|++|++++|.+++. +.+..+ ++|++|++++|.+++..|..+..+++|++|++++|++++..+..|..+++|+.|
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKEL-TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTC-TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCC-CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 34444444444444431 233333 345555555555554444555666666666666666665555556666666666
Q ss_pred ecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccC
Q 039957 221 FLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLN 300 (481)
Q Consensus 221 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 300 (481)
++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|++++..|..+..++.|+.|++++|.+.
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 66666666666666667777777777777777666666677777777777777777666666677777777777777766
Q ss_pred CCCCCccccCCcCcEEEccCCeeeeeccccccccCC
Q 039957 301 DSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVD 336 (481)
Q Consensus 301 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 336 (481)
+. ++.++.++++.|+++|.+|..++.+..
T Consensus 219 ~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 219 CT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 43 345777788888888888887766544
No 79
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.94 E-value=5e-27 Score=230.08 Aligned_cols=133 Identities=27% Similarity=0.421 Sum_probs=119.0
Q ss_pred ccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHHh
Q 039957 342 LAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 342 ~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
|.|+||.||+|.. .+|..||||.+........+.+.+|+.++++++|||||++++++...+ +|||++|+|.+++
T Consensus 160 G~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i 239 (423)
T 4fie_A 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 239 (423)
T ss_dssp EECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHH
T ss_pred ccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHH
Confidence 7899999999985 468999999998766555667889999999999999999999988765 7899999999988
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
... .++..+...|+.+|++||+||| +.+||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 240 ~~~--~l~e~~~~~~~~qil~aL~ylH----~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 240 THT--RMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp HHS--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred hcc--CCCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 754 4778889999999999999999 6789999999999999999999999999998653
No 80
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=9.4e-26 Score=211.31 Aligned_cols=202 Identities=26% Similarity=0.306 Sum_probs=113.9
Q ss_pred CCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcc
Q 039957 39 IRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118 (481)
Q Consensus 39 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 118 (481)
.+.+++++|+++ .+|..+. +++++|++++|++++..+..|..+++|++|++++|.++...+..|.++++|++|+++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCEEEccCCCCC-ccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 455666666665 4554432 455666666666655555556666666666666666665555555556666666666
Q ss_pred cccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEec
Q 039957 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSL 198 (481)
Q Consensus 119 ~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 198 (481)
+|.++.++... +..+++|++|+|++|.+++ ..|..|..+++|++|++
T Consensus 94 ~n~l~~~~~~~--------~~~l~~L~~L~l~~n~l~~-------------------------~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 94 DNKLQALPIGV--------FDQLVNLAELRLDRNQLKS-------------------------LPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp SSCCCCCCTTT--------TTTCSSCCEEECCSSCCCC-------------------------CCTTTTTTCTTCCEEEC
T ss_pred CCcCCcCCHhH--------cccccCCCEEECCCCccCe-------------------------eCHHHhCcCcCCCEEEC
Confidence 66555443211 2334444444444444443 33334444555555555
Q ss_pred ccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcc
Q 039957 199 GFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTS 277 (481)
Q Consensus 199 ~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 277 (481)
++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 5555554444445555556666666666655555556666666666666666666555566666777777777776653
No 81
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.3e-25 Score=210.47 Aligned_cols=204 Identities=25% Similarity=0.258 Sum_probs=159.0
Q ss_pred CccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCC
Q 039957 63 NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCR 142 (481)
Q Consensus 63 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~ 142 (481)
+.+++++++|+++ .+|..+. ++|+.|++++|++++..+..|.++++|++|++++|.++.++... +.+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~--------~~~l~ 85 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGI--------FKELK 85 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTT--------TSSCT
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhh--------hcCCC
Confidence 4566777777766 3444332 45667777777766665556666666666666666665543221 23344
Q ss_pred CCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeec
Q 039957 143 YLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFL 222 (481)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 222 (481)
+|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++
T Consensus 86 -------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 86 -------------------------NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp -------------------------TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred -------------------------CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 4555555555555445556778899999999999999888888999999999999
Q ss_pred CCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCC
Q 039957 223 PETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDS 302 (481)
Q Consensus 223 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 302 (481)
++|.+++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|++++..+..+..++.|+.|++++|.+...
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 99999998888899999999999999999988888899999999999999999987777889999999999999998654
No 82
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.94 E-value=6.2e-27 Score=219.37 Aligned_cols=137 Identities=26% Similarity=0.396 Sum_probs=115.0
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCC---------Cccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTP---------DFKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------~~~~~~ 407 (481)
..|+|+||.||+|... ++..||+|.+.... ....+.|.+|+.++++++|||||+++++|... .+|||+
T Consensus 33 ~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~ 112 (290)
T 3fpq_A 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT 112 (290)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCC
Confidence 3589999999999854 58899999986543 23345789999999999999999999987542 268999
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-CCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-NMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++... ..+++..+..++.+|++||+|||+. .++||||||||+|||+++ ++.+||+|||+|+..
T Consensus 113 gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~--~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 113 SGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR--TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp SCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS--SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC--CCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999998753 4578889999999999999999942 235999999999999985 799999999999864
No 83
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=1.2e-26 Score=217.66 Aligned_cols=224 Identities=19% Similarity=0.207 Sum_probs=123.3
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
++..+++..+.+....... .+++|+.|++++|.++. + ..+..+++|++|++++|.+++. ..++.+++|++|++
T Consensus 20 ~l~~l~l~~~~~~~~~~~~---~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAVTQN---ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHTCSCTTSEECHH---HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred HHHHHHhcCcccccccccc---cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 4445566666665332221 46677777777777652 2 2466677777777777777652 35667777777777
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEe
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLS 197 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 197 (481)
++|.++++++. .+.++++|++|+|++|++++..+..+..+ ++|++|++++|++++..|..+..+++|++|+
T Consensus 93 ~~n~l~~~~~~--------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 93 TGNQLQSLPNG--------VFDKLTNLKELVLVENQLQSLPDGVFDKL-TNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTSCCCCCCTT--------TTTTCTTCCEEECTTSCCCCCCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCccCccChh--------HhcCCcCCCEEECCCCcCCccCHHHhccC-CCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 77766655332 23455666666666666665444444443 3455555555555544444455555555555
Q ss_pred cccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcc
Q 039957 198 LGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTS 277 (481)
Q Consensus 198 l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 277 (481)
+++|++++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+. +++|+.|+++.|+++|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g 236 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 236 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGG
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCC
Confidence 555555544444445555555555555555554444455555555555555544322 2244445555555555
Q ss_pred cCCcchh
Q 039957 278 SIPSSLW 284 (481)
Q Consensus 278 ~~p~~~~ 284 (481)
.+|.+++
T Consensus 237 ~ip~~~~ 243 (272)
T 3rfs_A 237 VVRNSAG 243 (272)
T ss_dssp GBBCTTS
T ss_pred cccCccc
Confidence 4444443
No 84
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.94 E-value=8.4e-27 Score=222.24 Aligned_cols=129 Identities=24% Similarity=0.289 Sum_probs=113.5
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.|+|+||.||+|.. .+|..||||.++... ...+|+.++++++|||||++++++.+.+ +|||++|+|.++
T Consensus 66 lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~ 140 (336)
T 4g3f_A 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 140 (336)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHH
T ss_pred eccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHH
Confidence 37899999999985 468999999987542 2346999999999999999999987765 689999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC-cEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM-VAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~-~~kl~Dfgl~~~~ 479 (481)
+... ..+++.+...|+.||++||+||| +.+||||||||+|||++.++ ++||+|||+|+.+
T Consensus 141 l~~~-~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 141 IKQM-GCLPEDRALYYLGQALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp HHHH-SSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 8754 35788999999999999999999 68899999999999999987 6999999999865
No 85
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.94 E-value=6.7e-27 Score=220.27 Aligned_cols=135 Identities=31% Similarity=0.443 Sum_probs=117.9
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..|+|+||.||++.. .+|..||+|.+.... ....+.+.+|++++++++|||||++++++.+.+ +||+++|+
T Consensus 39 ~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~ 118 (311)
T 4aw0_A 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118 (311)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEE
T ss_pred EEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCC
Confidence 348899999999985 568999999997543 233456889999999999999999999998775 68999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++... ..++..+...++.||+.||+||| +.+||||||||+|||+++++.+||+|||+|+.+
T Consensus 119 L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~ 182 (311)
T 4aw0_A 119 LLKYIRKI-GSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182 (311)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence 99998753 34677888899999999999999 678999999999999999999999999999875
No 86
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.94 E-value=7.3e-27 Score=225.33 Aligned_cols=136 Identities=29% Similarity=0.472 Sum_probs=115.4
Q ss_pred hhccccccceeeeecc------CCcceEEEEEeccch-hhhhhhhHHHHHhhhhcc-CccceeecccCCCC------ccc
Q 039957 340 ISLAGSFGSVYKGTIS------DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRH-QNLIKILSSCSTPD------FKF 405 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~------~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~------~~~ 405 (481)
..|+|+||.||+|... .++.||||.+..... ...+.|.+|++++.+++| ||||+++|+|...+ +||
T Consensus 71 ~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey 150 (353)
T 4ase_A 71 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 150 (353)
T ss_dssp EEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEEC
T ss_pred EEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEc
Confidence 3488999999999753 235799999875432 334678999999999975 89999999986542 689
Q ss_pred ccCCChhHHhhcC---------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 039957 406 MPNGSLEKRLYSH---------------NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHV 470 (481)
Q Consensus 406 ~~~g~l~~~l~~~---------------~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl 470 (481)
|++|+|.++++.. ...++|.+++.|+.|||+||+||| +.+||||||||+|||+++++.+||
T Consensus 151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH----~~~iiHRDLK~~NILl~~~~~vKi 226 (353)
T 4ase_A 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKI 226 (353)
T ss_dssp CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh----hCCeecCccCccceeeCCCCCEEE
Confidence 9999999998752 234789999999999999999999 678999999999999999999999
Q ss_pred ccccCcccC
Q 039957 471 SDFGISKLL 479 (481)
Q Consensus 471 ~Dfgl~~~~ 479 (481)
+|||+|+.+
T Consensus 227 ~DFGlar~~ 235 (353)
T 4ase_A 227 CDFGLARDI 235 (353)
T ss_dssp CCCGGGSCT
T ss_pred Ccchhhhhc
Confidence 999999875
No 87
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.93 E-value=1.3e-26 Score=219.13 Aligned_cols=136 Identities=23% Similarity=0.391 Sum_probs=110.5
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCC-----------------
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTP----------------- 401 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----------------- 401 (481)
.|+|+||.||+|.. .+|..||||.+..... ...+.+.+|++++++++|||||++++++...
T Consensus 13 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~i 92 (299)
T 4g31_A 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYI 92 (299)
T ss_dssp EEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEE
T ss_pred EecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEE
Confidence 47899999999985 4689999999875443 3345788999999999999999999987432
Q ss_pred CcccccCCChhHHhhcCC--CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 402 DFKFMPNGSLEKRLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 402 ~~~~~~~g~l~~~l~~~~--~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+||+++|+|.+++.... ...++.....|+.||++||+||| +.+||||||||+|||++.++.+||+|||+|+.+
T Consensus 93 vmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH----~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~ 168 (299)
T 4g31_A 93 QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168 (299)
T ss_dssp EEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCCCC---
T ss_pred EEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH----HCcCccccCcHHHeEECCCCcEEEccCccceec
Confidence 267999999999987643 23466778899999999999999 678999999999999999999999999999875
Q ss_pred C
Q 039957 480 G 480 (481)
Q Consensus 480 ~ 480 (481)
.
T Consensus 169 ~ 169 (299)
T 4g31_A 169 D 169 (299)
T ss_dssp -
T ss_pred C
Confidence 3
No 88
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=1.4e-25 Score=206.14 Aligned_cols=196 Identities=17% Similarity=0.136 Sum_probs=138.8
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCcc-ceeecchhccccccCceeeccc-CcceecCcccccCCCCCCEE
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNN-LIGTIPNSITNATKLIILDLGF-NTFSGHIPNTFGNLRHLSVL 115 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 115 (481)
+|++|++++|+++ .+|...+..+++|++|++++|+ +++..+..|.++++|++|++++ |.+++..+..|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 6778888888877 4444333467788888888886 7766666777788888888887 77877777777788888888
Q ss_pred EcccccCccccCCCccccccccCCCCCCCc---EEEccCC-ccceeCChhhhhcccCcc-EEEccCCceeecCCcccccC
Q 039957 116 SLLMNNLTTESSSAYQWSFLSSLTNCRYLV---YLILSGN-PLGGILPPSIGNFSTSLQ-RFSASECKLKGTIPKEIGHL 190 (481)
Q Consensus 116 ~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~---~L~Ls~N-~l~~~~p~~~~~~~~~L~-~L~l~~n~l~~~~p~~~~~l 190 (481)
++++|.+++++. +..+++|+ +|++++| .+++..+..|..+ ++|+ .|++++|+++...+..|..
T Consensus 111 ~l~~n~l~~lp~----------~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l-~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 111 GIFNTGLKMFPD----------LTKVYSTDIFFILEITDNPYMTSIPVNAFQGL-CNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp EEEEECCCSCCC----------CTTCCBCCSEEEEEEESCTTCCEECTTTTTTT-BSSEEEEECCSCCCCEECTTTTTT-
T ss_pred eCCCCCCccccc----------cccccccccccEEECCCCcchhhcCcccccch-hcceeEEEcCCCCCcccCHhhcCC-
Confidence 888887776532 23444444 8888888 7776666666665 5688 8888888887433333444
Q ss_pred CCCCeEeccccc-ceecCCcCCcCC-CCCCeeecCCCcCCCCCCccccCccCCCeeecCCC
Q 039957 191 RGLIYLSLGFND-LNGTIPTSIGTL-KQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGN 249 (481)
Q Consensus 191 ~~L~~L~l~~N~-l~~~~p~~~~~l-~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 249 (481)
++|++|++++|+ +++..+..|..+ ++|+.|++++|++++..+. .++.|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 778888888884 776667777888 8888888888888765444 4566777777765
No 89
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=3.2e-25 Score=209.64 Aligned_cols=203 Identities=23% Similarity=0.174 Sum_probs=106.6
Q ss_pred ccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCC
Q 039957 33 IFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHL 112 (481)
Q Consensus 33 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 112 (481)
+.++++++++++++|.++ .+|..++ +++++|+|++|++++..|..|..+++|++|+|++|.+++..+. +.+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 456666777777777776 5665442 4566666666666666566666666666666666666543321 455555
Q ss_pred CEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCC
Q 039957 113 SVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRG 192 (481)
Q Consensus 113 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~ 192 (481)
++|++++|+++.++. .+..+++ |++|++++|++++..|..|..+++
T Consensus 80 ~~L~Ls~N~l~~l~~---------~~~~l~~-------------------------L~~L~l~~N~l~~l~~~~~~~l~~ 125 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPL---------LGQTLPA-------------------------LTVLDVSFNRLTSLPLGALRGLGE 125 (290)
T ss_dssp CEEECCSSCCSSCCC---------CTTTCTT-------------------------CCEEECCSSCCCCCCSSTTTTCTT
T ss_pred CEEECCCCcCCcCch---------hhccCCC-------------------------CCEEECCCCcCcccCHHHHcCCCC
Confidence 555555555443311 1222333 333333333333333344555555
Q ss_pred CCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCC
Q 039957 193 LIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGS 272 (481)
Q Consensus 193 L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 272 (481)
|++|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|+++ .+|..+..+.+|+.+++++
T Consensus 126 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~ 204 (290)
T 1p9a_G 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHG 204 (290)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCS
T ss_pred CCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCC
Confidence 555555555555444444455555555555555555444444455555555555555555 3344444445555555555
Q ss_pred CcCc
Q 039957 273 NKLT 276 (481)
Q Consensus 273 N~l~ 276 (481)
|.+.
T Consensus 205 Np~~ 208 (290)
T 1p9a_G 205 NPWL 208 (290)
T ss_dssp CCBC
T ss_pred CCcc
Confidence 5543
No 90
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=7.3e-25 Score=207.17 Aligned_cols=205 Identities=23% Similarity=0.180 Sum_probs=143.4
Q ss_pred ccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCc
Q 039957 106 FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPK 185 (481)
Q Consensus 106 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~ 185 (481)
++++++++++++++|.++.++... .+.+++|+|++|.+++..|..+..+ ++|+.|++++|.+++..+.
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~-----------~~~l~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~ 73 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDL-----------PKDTTILHLSENLLYTFSLATLMPY-TRLTQLNLDRAELTKLQVD 73 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCC-----------CTTCCEEECTTSCCSEEEGGGGTTC-TTCCEEECTTSCCCEEECC
T ss_pred ccccCCccEEECCCCCCCcCCCCC-----------CCCCCEEEcCCCcCCccCHHHhhcC-CCCCEEECCCCccCcccCC
Confidence 444555555555555555443211 1345556666666655555555554 4566666666666643322
Q ss_pred ccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCC
Q 039957 186 EIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSL 265 (481)
Q Consensus 186 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 265 (481)
+.+++|++|++++|+++ .+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++.++..|..+++|
T Consensus 74 --~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 150 (290)
T 1p9a_G 74 --GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150 (290)
T ss_dssp --SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred --CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCC
Confidence 56677777777777776 566677777788888888888887777778888888888888888887777777888888
Q ss_pred CcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeee
Q 039957 266 RELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 266 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 326 (481)
+.|++++|++++..+..+..++.|+.|++++|+++ .+|..+.....|+.+++++|++.+.
T Consensus 151 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 88888888888666666777888888888888887 4677777778899999999998754
No 91
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=1.5e-27 Score=233.33 Aligned_cols=259 Identities=17% Similarity=0.152 Sum_probs=161.8
Q ss_pred eeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccC----hhhhcCCC-CccEEEccCccceeecchhcccc-----c
Q 039957 17 SLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLP----SMIGHSLP-NIKYLELGDNNLIGTIPNSITNA-----T 86 (481)
Q Consensus 17 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~ 86 (481)
.++|++|++++.+|..+...++|++|+|++|.+++..+ ..+ ..++ +|++|+|++|++++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l-~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAF-ANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHH-HTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHH-HhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 35778888888777766666668888888888874333 333 3567 78888888888877767666665 7
Q ss_pred cCceeecccCcceecCcccccC----C-CCCCEEEcccccCccccCCCccccccccCCC-CCCCcEEEccCCccceeCCh
Q 039957 87 KLIILDLGFNTFSGHIPNTFGN----L-RHLSVLSLLMNNLTTESSSAYQWSFLSSLTN-CRYLVYLILSGNPLGGILPP 160 (481)
Q Consensus 87 ~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~-l~~L~~L~Ls~N~l~~~~p~ 160 (481)
+|++|+|++|.+++..+..+.. + ++|++|++++|.++......+ ...+.. .++|++|+|++|.+++..+.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l----~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 156 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF----KQAFSNLPASITSLNLRGNDLGIKSSD 156 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH----HHHHTTSCTTCCEEECTTSCGGGSCHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH----HHHHHhCCCceeEEEccCCcCCHHHHH
Confidence 8888888888887766664433 3 788888888888776532221 122333 25788888888888753333
Q ss_pred h----hhhcccCccEEEccCCceeecCCcccc----cC-CCCCeEecccccceec----CCcCCcC-CCCCCeeecCCCc
Q 039957 161 S----IGNFSTSLQRFSASECKLKGTIPKEIG----HL-RGLIYLSLGFNDLNGT----IPTSIGT-LKQLQGFFLPETN 226 (481)
Q Consensus 161 ~----~~~~~~~L~~L~l~~n~l~~~~p~~~~----~l-~~L~~L~l~~N~l~~~----~p~~~~~-l~~L~~l~l~~n~ 226 (481)
. +.....+|++|++++|++++..+..++ .+ ++|++|++++|.++.. ++..+.. .++|+.|++++|.
T Consensus 157 ~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 157 ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 2 333333677888888877755554443 33 4777788887777642 3333433 3466667776666
Q ss_pred CCCCCC----ccccCccCCCeeecCCCeeeecC-------CcccccCCCCCcEEcCCCcCcccCC
Q 039957 227 LQGYVP----HNLCHLEMLNLLHLGGNKLSGHI-------PPCLASLTSLRELDLGSNKLTSSIP 280 (481)
Q Consensus 227 l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~-------p~~~~~l~~L~~L~ls~N~l~~~~p 280 (481)
+++..+ ..+..++.|+.|++++|.+.+.. +..+..+++|+.||+++|++....+
T Consensus 237 l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 237 LHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp CCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred CCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 665433 22345566666666666643222 2244555666666666666654433
No 92
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.93 E-value=5.6e-26 Score=211.02 Aligned_cols=134 Identities=29% Similarity=0.450 Sum_probs=109.8
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.++|+||.||++.. .+|..||+|.+.... ......+.+|++++++++|||||++++++.+.+ +||+ +|+|
T Consensus 21 lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L 99 (275)
T 3hyh_A 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNEL 99 (275)
T ss_dssp EEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEH
T ss_pred EecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCH
Confidence 47899999999985 468999999987543 223456889999999999999999999988765 6788 6899
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
.+++... ..++..+...++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+|+...
T Consensus 100 ~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 100 FDYIVQR-DKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp HHHHHHS-CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred HHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 9988754 35788899999999999999999 6789999999999999999999999999998653
No 93
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=4.2e-26 Score=218.19 Aligned_cols=230 Identities=16% Similarity=0.149 Sum_probs=183.4
Q ss_pred CCCCeeeCcCCcccccCCh---hccCCcCCCEEEeeCCcCccccChhhh-cCCCCccEEEccCccceeecc----hhccc
Q 039957 13 QNLKSLFLGANNLSGLIPP---MIFNISTIRNLNLGGNRLSGHLPSMIG-HSLPNIKYLELGDNNLIGTIP----NSITN 84 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~-~~l~~L~~L~L~~N~l~~~~p----~~~~~ 84 (481)
..++.|.+.++.++...-. .+..+++|++|++++|++++..|..++ ..+++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888888877532111 133456799999999999988888763 479999999999999987655 44567
Q ss_pred cccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCCh---h
Q 039957 85 ATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPP---S 161 (481)
Q Consensus 85 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~---~ 161 (481)
+++|++|+|++|.+++..|..|+.+++|++|+|++|++.+....+ ....+..+++|++|+|++|+++.. +. .
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~ 218 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLM----AALCPHKFPAIQNLALRNTGMETP-TGVCAA 218 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHH----TTSCTTSSCCCCSCBCCSSCCCCH-HHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhh----HHHhhhcCCCCCEEECCCCCCCch-HHHHHH
Confidence 999999999999999999999999999999999999987531100 012235788999999999999732 22 2
Q ss_pred -hhhcccCccEEEccCCceeecCCcccccC---CCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccC
Q 039957 162 -IGNFSTSLQRFSASECKLKGTIPKEIGHL---RGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCH 237 (481)
Q Consensus 162 -~~~~~~~L~~L~l~~n~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~ 237 (481)
+..+ ++|++|++++|++++..|..+..+ ++|++|++++|+++ .+|..+. ++|+.|++++|++++. |. +..
T Consensus 219 l~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~ 292 (310)
T 4glp_A 219 LAAAG-VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDE 292 (310)
T ss_dssp HHHHT-CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTS
T ss_pred HHhcC-CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhh
Confidence 2344 689999999999998888888776 69999999999999 6777775 7999999999999985 33 678
Q ss_pred ccCCCeeecCCCeeee
Q 039957 238 LEMLNLLHLGGNKLSG 253 (481)
Q Consensus 238 l~~L~~L~L~~N~l~~ 253 (481)
+++|+.|++++|+++.
T Consensus 293 l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 293 LPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCCSCEECSSTTTSC
T ss_pred CCCccEEECcCCCCCC
Confidence 8999999999999863
No 94
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.92 E-value=2e-26 Score=217.01 Aligned_cols=135 Identities=29% Similarity=0.361 Sum_probs=110.1
Q ss_pred hhccccccceeeeecc----CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 340 ISLAGSFGSVYKGTIS----DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~----~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
..|+|+||.||++... .+..||+|.+..... .....+.+|++++++++|||||++++++.+.+ +||+++
T Consensus 31 ~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~g 110 (304)
T 3ubd_A 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG 110 (304)
T ss_dssp EEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTT
T ss_pred EEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCC
Confidence 3489999999999742 367899999875432 23346788999999999999999999988765 789999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++... ..++..+...++.||+.||+||| +.+||||||||+|||+++++++||+|||+|+..
T Consensus 111 g~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 111 GDLFTRLSKE-VMFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp CEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999998753 35778888999999999999999 678999999999999999999999999999864
No 95
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.4e-25 Score=214.65 Aligned_cols=225 Identities=22% Similarity=0.226 Sum_probs=184.0
Q ss_pred CcCCCEEEeeCCcCccc----cChhhhcCCCCccEEEccCccceeecchhc--cccccCceeecccCcceecCc----cc
Q 039957 36 ISTIRNLNLGGNRLSGH----LPSMIGHSLPNIKYLELGDNNLIGTIPNSI--TNATKLIILDLGFNTFSGHIP----NT 105 (481)
Q Consensus 36 l~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~ 105 (481)
...++.|.+.++.++.. ++... .+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..| ..
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~--~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~ 140 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVL--AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQ 140 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHH--HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHH
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhc--ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHH
Confidence 34578999999887631 12222 35779999999999999999988 999999999999999997655 45
Q ss_pred ccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCcccee---CChh-hhhcccCccEEEccCCceee
Q 039957 106 FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGI---LPPS-IGNFSTSLQRFSASECKLKG 181 (481)
Q Consensus 106 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~---~p~~-~~~~~~~L~~L~l~~n~l~~ 181 (481)
+..+++|++|++++|.++++++ ..+..+++|++|+|++|++.+. .+.. +..+ ++|++|++++|+++.
T Consensus 141 ~~~~~~L~~L~Ls~n~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~ 211 (310)
T 4glp_A 141 QWLKPGLKVLSIAQAHSPAFSC--------EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF-PAIQNLALRNTGMET 211 (310)
T ss_dssp TTBCSCCCEEEEECCSSCCCCT--------TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS-CCCCSCBCCSSCCCC
T ss_pred hhhccCCCEEEeeCCCcchhhH--------HHhccCCCCCEEECCCCCCccchhhhHHHhhhcC-CCCCEEECCCCCCCc
Confidence 6789999999999999988754 3467889999999999998652 2222 2344 689999999999973
Q ss_pred cCCc----ccccCCCCCeEecccccceecCCcCCcCC---CCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeec
Q 039957 182 TIPK----EIGHLRGLIYLSLGFNDLNGTIPTSIGTL---KQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGH 254 (481)
Q Consensus 182 ~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 254 (481)
+|. .+..+++|++|++++|++++..|..+..+ ++|+.|++++|+++. +|..+. ++|+.|++++|++++.
T Consensus 212 -l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 212 -PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA 287 (310)
T ss_dssp -HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC
T ss_pred -hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC
Confidence 333 35788999999999999998888888877 699999999999994 566664 7999999999999975
Q ss_pred CCcccccCCCCCcEEcCCCcCcc
Q 039957 255 IPPCLASLTSLRELDLGSNKLTS 277 (481)
Q Consensus 255 ~p~~~~~l~~L~~L~ls~N~l~~ 277 (481)
|. +..+++|+.|++++|+++.
T Consensus 288 -~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 288 -PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -CC-TTSCCCCSCEECSSTTTSC
T ss_pred -ch-hhhCCCccEEECcCCCCCC
Confidence 33 6888999999999999874
No 96
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=2.3e-26 Score=222.58 Aligned_cols=253 Identities=18% Similarity=0.171 Sum_probs=152.4
Q ss_pred CCeeeCcCCcccccCChhccCC--cCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceee-cchhccccccCcee
Q 039957 15 LKSLFLGANNLSGLIPPMIFNI--STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGT-IPNSITNATKLIIL 91 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 91 (481)
++.+|+++|.+. |..+..+ ++++.|++++|.+++..+. ++ .+++|++|++++|.+++. +|..+..+++|++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~-~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hc-cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 677777777765 4556666 7777888888777755444 33 577788888887777655 66677777778888
Q ss_pred ecccCcceecCcccccCCCCCCEEEcccc-cCccccCCCccccccccCCCCCCCcEEEccCC-cccee-CChhhhhcccC
Q 039957 92 DLGFNTFSGHIPNTFGNLRHLSVLSLLMN-NLTTESSSAYQWSFLSSLTNCRYLVYLILSGN-PLGGI-LPPSIGNFSTS 168 (481)
Q Consensus 92 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~~~~~ 168 (481)
++++|.+++..|..|+.+++|++|++++| .++... .+..+.++++|++|++++| .+++. ++..+..+..+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~-------l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~ 196 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFA-------LQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET 196 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHH-------HHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHH-------HHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC
Confidence 88877777777777777777777777777 455310 1122345666777777777 66643 34445444226
Q ss_pred ccEEEccCC--cee-ecCCcccccCCCCCeEeccccc-ceecCCcCCcCCCCCCeeecCCCc-CCCCCCccccCccCCCe
Q 039957 169 LQRFSASEC--KLK-GTIPKEIGHLRGLIYLSLGFND-LNGTIPTSIGTLKQLQGFFLPETN-LQGYVPHNLCHLEMLNL 243 (481)
Q Consensus 169 L~~L~l~~n--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~~~~l~~L~~ 243 (481)
|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 777777776 343 3455555666666777766666 554555556666666666666653 11111113445555555
Q ss_pred eecCCCeeeecCCcccccCC-CCCcEEcCCCcCcccCCcch
Q 039957 244 LHLGGNKLSGHIPPCLASLT-SLRELDLGSNKLTSSIPSSL 283 (481)
Q Consensus 244 L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~ 283 (481)
|++++| + ....+..+. +++.|++++|++++..|..+
T Consensus 277 L~l~~~-i---~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 277 LQVFGI-V---PDGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp EECTTS-S---CTTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred EeccCc-c---CHHHHHHHHhhCcceEEecccCccccCCcc
Confidence 555555 1 122233332 25555555555555554443
No 97
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.9e-24 Score=198.60 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=136.0
Q ss_pred CccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCc-ceecCcccccCCCCCCEEEccc-ccCcccc
Q 039957 49 LSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNT-FSGHIPNTFGNLRHLSVLSLLM-NNLTTES 126 (481)
Q Consensus 49 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~ 126 (481)
++ .+|. +. ++|++|++++|++++..+..|.++++|++|++++|. ++++.+..|.++++|++|++++ |+++.++
T Consensus 23 l~-~ip~-~~---~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 23 IQ-RIPS-LP---PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp CS-SCCC-CC---TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred cc-ccCC-CC---CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 54 5665 32 367777777777776666677777777777777775 7666666777777777777776 7777664
Q ss_pred CCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCcc---EEEccCC-ceeecCCcccccCCCCC-eEecccc
Q 039957 127 SSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQ---RFSASEC-KLKGTIPKEIGHLRGLI-YLSLGFN 201 (481)
Q Consensus 127 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~---~L~l~~n-~l~~~~p~~~~~l~~L~-~L~l~~N 201 (481)
... +.++++|++|++++|.+++ +|+ +..+ ++|+ .|++++| .+++..+..|.++++|+ +|++++|
T Consensus 98 ~~~--------f~~l~~L~~L~l~~n~l~~-lp~-~~~l-~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 98 PDA--------LKELPLLKFLGIFNTGLKM-FPD-LTKV-YSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp TTS--------EECCTTCCEEEEEEECCCS-CCC-CTTC-CBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred HHH--------hCCCCCCCEEeCCCCCCcc-ccc-cccc-cccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 333 3456677777777777765 444 4444 4565 7777777 77766666677777777 7777777
Q ss_pred cceecCCcCCcCCCCCCeeecCCCc-CCCCCCccccCc-cCCCeeecCCCeeeecCCcccccCCCCCcEEcCCC
Q 039957 202 DLNGTIPTSIGTLKQLQGFFLPETN-LQGYVPHNLCHL-EMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSN 273 (481)
Q Consensus 202 ~l~~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 273 (481)
+++...+..|.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++.++. .+++|+.|+++++
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 776333333433 677777777773 776666667777 7777777777777654333 4556777777665
No 98
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=6.2e-27 Score=228.96 Aligned_cols=266 Identities=16% Similarity=0.145 Sum_probs=165.7
Q ss_pred EEEeeCCcCccccChhhhcCCCCccEEEccCccceeecc----hhccccc-cCceeecccCcceecCcccccCC-----C
Q 039957 41 NLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIP----NSITNAT-KLIILDLGFNTFSGHIPNTFGNL-----R 110 (481)
Q Consensus 41 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 110 (481)
.++++.|.++|.+|..+. ..++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..|..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 467888999887777664 45569999999999887666 6777787 89999999999888777777765 8
Q ss_pred CCCEEEcccccCccccCCCccccccccCCCC-CCCcEEEccCCccceeCChhhhhc----ccCccEEEccCCceeec---
Q 039957 111 HLSVLSLLMNNLTTESSSAYQWSFLSSLTNC-RYLVYLILSGNPLGGILPPSIGNF----STSLQRFSASECKLKGT--- 182 (481)
Q Consensus 111 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~~----~~~L~~L~l~~n~l~~~--- 182 (481)
+|++|+|++|.++......+ ...+..+ ++|++|+|++|++++..+..+... .++|++|++++|.++..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l----~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 156 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDEL----VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD 156 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHH----HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH
T ss_pred CccEEECcCCcCChHHHHHH----HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH
Confidence 88888888888876532211 1123334 678888888888876555444432 23566777777666532
Q ss_pred -CCcccccCC-CCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCc-cCCCeeecCCCeeeec----C
Q 039957 183 -IPKEIGHLR-GLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHL-EMLNLLHLGGNKLSGH----I 255 (481)
Q Consensus 183 -~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~----~ 255 (481)
++..+..++ +|++|++++|++++..+..+.. .+... ++|+.|+|++|++++. +
T Consensus 157 ~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~--------------------~l~~~~~~L~~L~Ls~N~i~~~~~~~l 216 (362)
T 3goz_A 157 ELIQILAAIPANVNSLNLRGNNLASKNCAELAK--------------------FLASIPASVTSLDLSANLLGLKSYAEL 216 (362)
T ss_dssp HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH--------------------HHHTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred HHHHHHhcCCccccEeeecCCCCchhhHHHHHH--------------------HHHhCCCCCCEEECCCCCCChhHHHHH
Confidence 222233333 5555555555554333322211 11122 3555666666655531 2
Q ss_pred Cccccc-CCCCCcEEcCCCcCcccCCc----chhccccCcEEEccCcccCCCC-------CCccccCCcCcEEEccCCee
Q 039957 256 PPCLAS-LTSLRELDLGSNKLTSSIPS----SLWSLGYILEINLSSNLLNDSL-------PSNVQKLKVLRVLDLSRNQL 323 (481)
Q Consensus 256 p~~~~~-l~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~-------p~~~~~l~~L~~L~l~~N~l 323 (481)
+..+.. .++|++|++++|++++..+. .+..++.|++|++++|.+.+.. +..+..++.|+.||+++|++
T Consensus 217 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l 296 (362)
T 3goz_A 217 AYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296 (362)
T ss_dssp HHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBC
T ss_pred HHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcC
Confidence 333444 34677777777766654332 2344566777777777654332 33566788899999999998
Q ss_pred eeeccccc
Q 039957 324 SGDIPSTI 331 (481)
Q Consensus 324 ~~~~p~~~ 331 (481)
....+..+
T Consensus 297 ~~~~~~~~ 304 (362)
T 3goz_A 297 HPSHSIPI 304 (362)
T ss_dssp CGGGCHHH
T ss_pred CCcchHHH
Confidence 86544443
No 99
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=4.8e-27 Score=231.89 Aligned_cols=247 Identities=17% Similarity=0.225 Sum_probs=160.7
Q ss_pred CChhccCCcCCCEEEeeCCcCccccChhh---hcCCCCccEEEccCc---cceeecchhc-------cccccCceeeccc
Q 039957 29 IPPMIFNISTIRNLNLGGNRLSGHLPSMI---GHSLPNIKYLELGDN---NLIGTIPNSI-------TNATKLIILDLGF 95 (481)
Q Consensus 29 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~Ls~ 95 (481)
++..+..+++|++|+|++|+++...+..+ ...+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44555556666666666666654322221 114566666666664 3333444433 4566666666666
Q ss_pred Cccee----cCcccccCCCCCCEEEcccccCccccCCCccccccccCCCC---------CCCcEEEccCCccc-eeCC--
Q 039957 96 NTFSG----HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNC---------RYLVYLILSGNPLG-GILP-- 159 (481)
Q Consensus 96 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l---------~~L~~L~Ls~N~l~-~~~p-- 159 (481)
|.++. .+|..+..+++|++|+|++|.++......+ ...+..+ ++|++|+|++|+++ +.+|
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l----~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 179 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI----ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH----HHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHH----HHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHH
Confidence 66665 355566666677777776666653311111 1112222 56777777777776 2233
Q ss_pred -hhhhhcccCccEEEccCCcee--e---cCCcccccCCCCCeEecccccce----ecCCcCCcCCCCCCeeecCCCcCCC
Q 039957 160 -PSIGNFSTSLQRFSASECKLK--G---TIPKEIGHLRGLIYLSLGFNDLN----GTIPTSIGTLKQLQGFFLPETNLQG 229 (481)
Q Consensus 160 -~~~~~~~~~L~~L~l~~n~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~l~l~~n~l~~ 229 (481)
..+..+ ++|++|++++|+++ | ..|..+..+++|++|+|++|.++ +.+|..+..+++|+.|++++|.+++
T Consensus 180 ~~~l~~~-~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 180 AKTFQSH-RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp HHHHHHC-TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred HHHHHhC-CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 233344 46778888887776 2 34446778888888888888885 5677778888888899998888876
Q ss_pred C----CCccc--cCccCCCeeecCCCeeee----cCCccc-ccCCCCCcEEcCCCcCcccCC
Q 039957 230 Y----VPHNL--CHLEMLNLLHLGGNKLSG----HIPPCL-ASLTSLRELDLGSNKLTSSIP 280 (481)
Q Consensus 230 ~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~~~~p 280 (481)
. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+
T Consensus 259 ~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 259 RGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred hhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 5 45555 348899999999999987 467766 668999999999999987664
No 100
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.92 E-value=3.5e-27 Score=246.22 Aligned_cols=331 Identities=12% Similarity=0.043 Sum_probs=180.7
Q ss_pred CCCeeeCcCCc-ccc-cCChhccCCcCCCEEEeeCCcCccc----cChhhhcCCCCccEEEccCccce----eecchhcc
Q 039957 14 NLKSLFLGANN-LSG-LIPPMIFNISTIRNLNLGGNRLSGH----LPSMIGHSLPNIKYLELGDNNLI----GTIPNSIT 83 (481)
Q Consensus 14 ~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~L~~N~l~----~~~p~~~~ 83 (481)
+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++... ..+++|++|++++|.++ +.++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~-~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELA-QHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHH-HHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHH-hcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 37777777765 211 1222234667777777777776543 22222 25677777777777765 33444556
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCc------------------cccccccCCCCCCCc
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAY------------------QWSFLSSLTNCRYLV 145 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~------------------~~~~~~~l~~l~~L~ 145 (481)
++++|+.|++++|.+.+ +|..+.++++|++|+++.+.........+ ....+..+..+++|+
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIR 296 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCc
Confidence 67777777777777764 55667777777777776422110000000 000112233455566
Q ss_pred EEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecc-----------cccceec-CCcCCcC
Q 039957 146 YLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLG-----------FNDLNGT-IPTSIGT 213 (481)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~-----------~N~l~~~-~p~~~~~ 213 (481)
+|+|++|.+++.....+....++|++|+++++...+.++..+..+++|++|+++ .|.++.. ++..+..
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 666666665433222211112456666666332222333333455666666666 2444322 1112234
Q ss_pred CCCCCeeecCCCcCCCCCCccccC-ccCCCeeecC----CCeeeec-----CCcccccCCCCCcEEcCCCc--CcccCCc
Q 039957 214 LKQLQGFFLPETNLQGYVPHNLCH-LEMLNLLHLG----GNKLSGH-----IPPCLASLTSLRELDLGSNK--LTSSIPS 281 (481)
Q Consensus 214 l~~L~~l~l~~n~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~ls~N~--l~~~~p~ 281 (481)
+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 566677776666666554444443 6667777774 5566542 22235556777777776433 4444333
Q ss_pred chh-ccccCcEEEccCcccCC-CCCCccccCCcCcEEEccCCeeeee-ccccccccCChhhhhccccc
Q 039957 282 SLW-SLGYILEINLSSNLLND-SLPSNVQKLKVLRVLDLSRNQLSGD-IPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 282 ~~~-~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~l~~~g~~ 346 (481)
.+. .++.|++|++++|.+++ .++..+..+++|++|++++|+++.. ++..+..+++|++|+++++.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 333 26677777777777764 2344456677788888888877543 33444567777777776654
No 101
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=4.4e-24 Score=207.64 Aligned_cols=240 Identities=16% Similarity=0.111 Sum_probs=149.3
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecc-hhccccccCce-eec
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIP-NSITNATKLII-LDL 93 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 93 (481)
++++.++++++. +|..+ .+++++|+|++|+|+ .+|+..+..+++|++|+|++|++.+.+| .+|.++++|.. +++
T Consensus 12 ~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 567788888874 45544 357888888888887 6776555578888888888888766555 46778877664 566
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccC-CccceeCChhhhhcccCccEE
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSG-NPLGGILPPSIGNFSTSLQRF 172 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~~~L~~L 172 (481)
++|+++.+.|..|..+++|++|++++|+++.++... .....++..|++.+ |++....+..|......++.|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~--------~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L 159 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVH--------KIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVIL 159 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCT--------TCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEE
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchh--------hcccchhhhhhhccccccccccccchhhcchhhhhh
Confidence 778888888888888888888888888887765433 22344566777755 456555455555544456667
Q ss_pred EccCCceeecCCcccccCCCCCeEeccc-ccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCee
Q 039957 173 SASECKLKGTIPKEIGHLRGLIYLSLGF-NDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKL 251 (481)
Q Consensus 173 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 251 (481)
++++|+++. +|.......+|+.+++++ |.++...+..|..+++|+.|++++|+++...+..|.+++.|+.+++ +.+
T Consensus 160 ~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l 236 (350)
T 4ay9_X 160 WLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNL 236 (350)
T ss_dssp ECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTC
T ss_pred ccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCc
Confidence 777777664 333333345566666653 4444333345566666666666666666554444444444433332 222
Q ss_pred eecCCcccccCCCCCcEEcCC
Q 039957 252 SGHIPPCLASLTSLRELDLGS 272 (481)
Q Consensus 252 ~~~~p~~~~~l~~L~~L~ls~ 272 (481)
+ .+| .+..+++|+.+++++
T Consensus 237 ~-~lP-~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 237 K-KLP-TLEKLVALMEASLTY 255 (350)
T ss_dssp C-CCC-CTTTCCSCCEEECSC
T ss_pred C-cCC-CchhCcChhhCcCCC
Confidence 2 233 245555555555544
No 102
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=2.3e-26 Score=226.98 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=143.0
Q ss_pred ccChhhhcCCCCccEEEccCccceeecc----hhccccccCceeecccC---cceecCcccc-------cCCCCCCEEEc
Q 039957 52 HLPSMIGHSLPNIKYLELGDNNLIGTIP----NSITNATKLIILDLGFN---TFSGHIPNTF-------GNLRHLSVLSL 117 (481)
Q Consensus 52 ~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L 117 (481)
.++..+. .+++|++|+|++|+++...+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|
T Consensus 23 ~l~~~l~-~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 23 SVFAVLL-EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp TTSHHHH-HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHh-cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 4566665 57888888888888876543 33667888888888885 4455556554 67778888888
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcc------------cCccEEEccCCcee-ecCC
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS------------TSLQRFSASECKLK-GTIP 184 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~------------~~L~~L~l~~n~l~-~~~p 184 (481)
++|.++..... .++..+..+++|++|+|++|.+++..+..+.... ++|++|++++|+++ +.+|
T Consensus 102 s~n~l~~~~~~----~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 177 (386)
T 2ca6_A 102 SDNAFGPTAQE----PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK 177 (386)
T ss_dssp CSCCCCTTTHH----HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH
T ss_pred CCCcCCHHHHH----HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHH
Confidence 88777652110 1123445667777777777777644333333221 34555555555554 2222
Q ss_pred ---cccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCC---CCCccccCccCCCeeecCCCeee----ec
Q 039957 185 ---KEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQG---YVPHNLCHLEMLNLLHLGGNKLS----GH 254 (481)
Q Consensus 185 ---~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~---~~p~~~~~l~~L~~L~L~~N~l~----~~ 254 (481)
..+..+++|++|++++|+++.. + ..|..+..+++|+.|+|++|.++ +.
T Consensus 178 ~l~~~l~~~~~L~~L~L~~n~l~~~----------------------g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~ 235 (386)
T 2ca6_A 178 EWAKTFQSHRLLHTVKMVQNGIRPE----------------------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 235 (386)
T ss_dssp HHHHHHHHCTTCCEEECCSSCCCHH----------------------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHH
T ss_pred HHHHHHHhCCCcCEEECcCCCCCHh----------------------HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHH
Confidence 2333444555555555544310 1 22334455555556666666553 34
Q ss_pred CCcccccCCCCCcEEcCCCcCccc----CCcchh--ccccCcEEEccCcccCC----CCCCcc-ccCCcCcEEEccCCee
Q 039957 255 IPPCLASLTSLRELDLGSNKLTSS----IPSSLW--SLGYILEINLSSNLLND----SLPSNV-QKLKVLRVLDLSRNQL 323 (481)
Q Consensus 255 ~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~--~l~~L~~L~l~~N~l~~----~~p~~~-~~l~~L~~L~l~~N~l 323 (481)
+|..+..+++|++|++++|.+++. +|..+. .++.|+.|++++|.+++ .+|..+ .++++|+.|++++|++
T Consensus 236 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 236 LAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 455555666666666666666543 333442 25666666666666655 345555 4467777777777777
Q ss_pred eeec
Q 039957 324 SGDI 327 (481)
Q Consensus 324 ~~~~ 327 (481)
++..
T Consensus 316 ~~~~ 319 (386)
T 2ca6_A 316 SEED 319 (386)
T ss_dssp CTTS
T ss_pred Ccch
Confidence 6544
No 103
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=8.7e-27 Score=243.18 Aligned_cols=333 Identities=15% Similarity=0.060 Sum_probs=199.6
Q ss_pred CCCCCCeeeCcCCcccccCChhccCC--cCCCEEEeeCCc-Ccc-ccChhhhcCCCCccEEEccCccceee----cchhc
Q 039957 11 NLQNLKSLFLGANNLSGLIPPMIFNI--STIRNLNLGGNR-LSG-HLPSMIGHSLPNIKYLELGDNNLIGT----IPNSI 82 (481)
Q Consensus 11 ~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~-l~~-~~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~~ 82 (481)
.+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. .++... ..+++|++|+|++|.+++. ++..+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~-~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIV-THCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHH-HHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHH-hhCCCCCEEECccccccCcchhHHHHHH
Confidence 56777777777777766555555553 337777777775 211 122222 2567788888888877655 34445
Q ss_pred cccccCceeecccCcce----ecCcccccCCCCCCEEEcccccCccccCCC-------------c-----cccccccCCC
Q 039957 83 TNATKLIILDLGFNTFS----GHIPNTFGNLRHLSVLSLLMNNLTTESSSA-------------Y-----QWSFLSSLTN 140 (481)
Q Consensus 83 ~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-------------~-----~~~~~~~l~~ 140 (481)
..+++|++|++++|.++ +.++..+.++++|++|++++|.+.+++... + .......+..
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 66778888888888776 344555667788888888887766542100 0 0011123344
Q ss_pred CCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCC-cccccCCCCCeEecccccceecCCcCCcCCCCCCe
Q 039957 141 CRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIP-KEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQG 219 (481)
Q Consensus 141 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 219 (481)
+++|+.|+++++.. +.+|..+..+ ++|++|++++|.+++... ..+..+++|++|+++++...+.++..+..+++|+.
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~-~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFA-AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGG-GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCE
T ss_pred cccccccCccccch-hHHHHHHhhc-CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCE
Confidence 45555555554322 2334444443 467777777777654332 33566777777777733222333333456677888
Q ss_pred eecCC-----------CcCCCCC-CccccCccCCCeeecCCCeeeecCCccccc-CCCCCcEEcC----CCcCccc----
Q 039957 220 FFLPE-----------TNLQGYV-PHNLCHLEMLNLLHLGGNKLSGHIPPCLAS-LTSLRELDLG----SNKLTSS---- 278 (481)
Q Consensus 220 l~l~~-----------n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~ls----~N~l~~~---- 278 (481)
|++++ |.+++.. +.....+++|+.|+++.|++++..+..+.. +++|+.|+++ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 88773 4444321 222344677888888777777665555554 7788888885 6667653
Q ss_pred -CCcchhccccCcEEEccCc--ccCCCCCCccc-cCCcCcEEEccCCeeee-eccccccccCChhhhhccccc
Q 039957 279 -IPSSLWSLGYILEINLSSN--LLNDSLPSNVQ-KLKVLRVLDLSRNQLSG-DIPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 279 -~p~~~~~l~~L~~L~l~~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~~~g~~ 346 (481)
++..+.+++.|+.|+++.+ .+++..+..+. .+++|+.|++++|++++ .++..+..+++|+.|+++++.
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 3334566778888888643 34443333333 36778888888888775 345555677888888877664
No 104
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=4.6e-24 Score=207.51 Aligned_cols=231 Identities=17% Similarity=0.136 Sum_probs=186.0
Q ss_pred ccCcchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccE-EEccCccceeecchhc
Q 039957 4 QIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKY-LELGDNNLIGTIPNSI 82 (481)
Q Consensus 4 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~-L~L~~N~l~~~~p~~~ 82 (481)
+||..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|...+..++++++ +.++.|+++...|..|
T Consensus 23 ~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f 100 (350)
T 4ay9_X 23 EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF 100 (350)
T ss_dssp SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSB
T ss_pred ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhh
Confidence 578766 3689999999999998888899999999999999999987888877778888775 6777899998889999
Q ss_pred cccccCceeecccCcceecCcccccCCCCCCEEEccc-ccCccccCCCccccccccCCCC-CCCcEEEccCCccceeCCh
Q 039957 83 TNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLM-NNLTTESSSAYQWSFLSSLTNC-RYLVYLILSGNPLGGILPP 160 (481)
Q Consensus 83 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~ 160 (481)
..+++|++|++++|.+++..+..+....++..|++.. |+++.++...| ..+ ..+++|+|++|+|+.+.+.
T Consensus 101 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f--------~~~~~~l~~L~L~~N~i~~i~~~ 172 (350)
T 4ay9_X 101 QNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF--------VGLSFESVILWLNKNGIQEIHNS 172 (350)
T ss_dssp CCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSS--------TTSBSSCEEEECCSSCCCEECTT
T ss_pred hhccccccccccccccccCCchhhcccchhhhhhhccccccccccccch--------hhcchhhhhhccccccccCCChh
Confidence 9999999999999999988888888888999999965 67887765443 333 4689999999999976555
Q ss_pred hhhhcccCccEEEccC-CceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCcc
Q 039957 161 SIGNFSTSLQRFSASE-CKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLE 239 (481)
Q Consensus 161 ~~~~~~~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~ 239 (481)
.+. . .+++++++++ |.++...+..|..+++|++||+++|+++...+..|.++++|+.+++ ++++ .+| .+..++
T Consensus 173 ~f~-~-~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~ 246 (350)
T 4ay9_X 173 AFN-G-TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLV 246 (350)
T ss_dssp SST-T-EEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCC
T ss_pred hcc-c-cchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCc
Confidence 444 3 4799999985 6666444457899999999999999999666666666665555443 3344 455 478899
Q ss_pred CCCeeecCCCe
Q 039957 240 MLNLLHLGGNK 250 (481)
Q Consensus 240 ~L~~L~L~~N~ 250 (481)
+|+.++++++.
T Consensus 247 ~L~~l~l~~~~ 257 (350)
T 4ay9_X 247 ALMEASLTYPS 257 (350)
T ss_dssp SCCEEECSCHH
T ss_pred ChhhCcCCCCc
Confidence 99999998764
No 105
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=5.6e-24 Score=203.02 Aligned_cols=210 Identities=24% Similarity=0.323 Sum_probs=116.8
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
+..+.+..+.++...+ +..+++|++|++++|.++ .+|. +. .+++|++|++++|++++..+ +..+++|++|+++
T Consensus 21 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~~-~~-~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~ 93 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIEG-VQ-YLNNLIGLELKDNQITDLAP--LKNLTKITELELS 93 (308)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC
T ss_pred HHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cchh-hh-ccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc
Confidence 3344555555554322 445667777777777776 4553 33 56777777777777764433 6677777777777
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEc
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSA 174 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l 174 (481)
+|.+++. | .|..+++|++|++++|++++++ .+..+++|++|++++|.+++..+ +..+ ++|+.|++
T Consensus 94 ~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~~----------~l~~l~~L~~L~l~~n~l~~~~~--l~~l-~~L~~L~l 158 (308)
T 1h6u_A 94 GNPLKNV-S-AIAGLQSIKTLDLTSTQITDVT----------PLAGLSNLQVLYLDLNQITNISP--LAGL-TNLQYLSI 158 (308)
T ss_dssp SCCCSCC-G-GGTTCTTCCEEECTTSCCCCCG----------GGTTCTTCCEEECCSSCCCCCGG--GGGC-TTCCEEEC
T ss_pred CCcCCCc-h-hhcCCCCCCEEECCCCCCCCch----------hhcCCCCCCEEECCCCccCcCcc--ccCC-CCccEEEc
Confidence 7776653 2 4666777777777777666542 13455666666666666654322 3332 34555555
Q ss_pred cCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeec
Q 039957 175 SECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGH 254 (481)
Q Consensus 175 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 254 (481)
++|.+++. +. +..+++|++|++++|++ ++..+ +..+++|+.|++++|++++.
T Consensus 159 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l------------------------~~~~~--l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 159 GNAQVSDL-TP-LANLSKLTTLKADDNKI------------------------SDISP--LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCCC-GG-GTTCTTCCEEECCSSCC------------------------CCCGG--GGGCTTCCEEECTTSCCCBC
T ss_pred cCCcCCCC-hh-hcCCCCCCEEECCCCcc------------------------CcChh--hcCCCCCCEEEccCCccCcc
Confidence 55544432 21 44444444444444444 43322 44455555555555555543
Q ss_pred CCcccccCCCCCcEEcCCCcCc
Q 039957 255 IPPCLASLTSLRELDLGSNKLT 276 (481)
Q Consensus 255 ~p~~~~~l~~L~~L~ls~N~l~ 276 (481)
. .+..+++|+.|++++|+++
T Consensus 211 ~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 211 S--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp G--GGTTCTTCCEEEEEEEEEE
T ss_pred c--cccCCCCCCEEEccCCeee
Confidence 3 2555556666666666554
No 106
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=5e-25 Score=213.23 Aligned_cols=198 Identities=19% Similarity=0.244 Sum_probs=120.8
Q ss_pred CCCEEEeeCCcCccccChhhhcCC--CCccEEEccCccceeecchhccccccCceeecccCcceec-CcccccCCCCCCE
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSL--PNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGH-IPNTFGNLRHLSV 114 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 114 (481)
.++.+++++|.+. |..+. .+ ++++.|++++|.+.+..+. +..+++|++|++++|.+++. +|..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~-~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTG-RLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHH-HHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHH-hhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3677888887775 23333 34 6788888888887766555 45677888888888877755 6777777788888
Q ss_pred EEcccccCccccCCCccccccccCCCCCCCcEEEccCC-cccee-CChhhhhcccCccEEEccCC-ceeec-CCcccccC
Q 039957 115 LSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGN-PLGGI-LPPSIGNFSTSLQRFSASEC-KLKGT-IPKEIGHL 190 (481)
Q Consensus 115 L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~~~~~L~~L~l~~n-~l~~~-~p~~~~~l 190 (481)
|++++|.++... +..+..+++|++|+|++| .+++. ++..+..+ ++|++|++++| .+++. ++..+..+
T Consensus 123 L~L~~~~l~~~~--------~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~-~~L~~L~l~~~~~l~~~~~~~~~~~l 193 (336)
T 2ast_B 123 LSLEGLRLSDPI--------VNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC-SRLDELNLSWCFDFTEKHVQVAVAHV 193 (336)
T ss_dssp EECTTCBCCHHH--------HHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHC-TTCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred EeCcCcccCHHH--------HHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcC-CCCCEEcCCCCCCcChHHHHHHHHhc
Confidence 888777765431 133455677777777777 56542 34444444 46777777777 66643 45556666
Q ss_pred C-CCCeEeccccc--ce-ecCCcCCcCCCCCCeeecCCCc-CCCCCCccccCccCCCeeecCCC
Q 039957 191 R-GLIYLSLGFND--LN-GTIPTSIGTLKQLQGFFLPETN-LQGYVPHNLCHLEMLNLLHLGGN 249 (481)
Q Consensus 191 ~-~L~~L~l~~N~--l~-~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~~~~l~~L~~L~L~~N 249 (481)
+ +|++|++++|. ++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|
T Consensus 194 ~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 194 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred ccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 6 66666666663 33 2334444445555555555554 34334444444444444444444
No 107
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=5.5e-24 Score=203.10 Aligned_cols=208 Identities=24% Similarity=0.347 Sum_probs=142.8
Q ss_pred EEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEccccc
Q 039957 42 LNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNN 121 (481)
Q Consensus 42 L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 121 (481)
+.+..+.++..++.. .+++|++|++++|.++. +| .+..+++|++|++++|.+++..+ |..+++|++|++++|.
T Consensus 24 ~~l~~~~~~~~~~~~---~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 24 IAAGKSNVTDTVTQA---DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHTTCSSTTSEECHH---HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHhCCCCcCceecHH---HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 344555554333321 35667777777776653 33 46666777777777776665433 6666666666666666
Q ss_pred CccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccc
Q 039957 122 LTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFN 201 (481)
Q Consensus 122 l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 201 (481)
+++++ .+..+++|++|++++|++++ +| .+..+++|++|++++|
T Consensus 97 l~~~~----------~~~~l~~L~~L~l~~n~l~~--------------------------~~-~l~~l~~L~~L~l~~n 139 (308)
T 1h6u_A 97 LKNVS----------AIAGLQSIKTLDLTSTQITD--------------------------VT-PLAGLSNLQVLYLDLN 139 (308)
T ss_dssp CSCCG----------GGTTCTTCCEEECTTSCCCC--------------------------CG-GGTTCTTCCEEECCSS
T ss_pred CCCch----------hhcCCCCCCEEECCCCCCCC--------------------------ch-hhcCCCCCCEEECCCC
Confidence 65541 23445555555555555543 22 2556667777777777
Q ss_pred cceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCc
Q 039957 202 DLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPS 281 (481)
Q Consensus 202 ~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 281 (481)
.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..|
T Consensus 140 ~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~- 212 (308)
T 1h6u_A 140 QITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP- 212 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-
T ss_pred ccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-
Confidence 7764433 6677777888888887776444 8888999999999999987544 8999999999999999986553
Q ss_pred chhccccCcEEEccCcccCC
Q 039957 282 SLWSLGYILEINLSSNLLND 301 (481)
Q Consensus 282 ~~~~l~~L~~L~l~~N~l~~ 301 (481)
+..++.|+.|++++|++++
T Consensus 213 -l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 213 -LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GTTCTTCCEEEEEEEEEEC
T ss_pred -ccCCCCCCEEEccCCeeec
Confidence 8899999999999999976
No 108
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.7e-23 Score=193.64 Aligned_cols=177 Identities=23% Similarity=0.296 Sum_probs=80.7
Q ss_pred CCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcc
Q 039957 39 IRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118 (481)
Q Consensus 39 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 118 (481)
.++++++++.++ .+|..+. +++++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 444555555554 4444332 345555555555554444455555555555555555555555555555555555555
Q ss_pred cccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEec
Q 039957 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSL 198 (481)
Q Consensus 119 ~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 198 (481)
+|++++++.. .+..+++|++|+|++|++++..+..+..+ ++|++|++++|++++..+..|..+++|++|++
T Consensus 92 ~n~l~~~~~~--------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 162 (251)
T 3m19_A 92 NNQLASLPLG--------VFDHLTQLDKLYLGGNQLKSLPSGVFDRL-TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSL 162 (251)
T ss_dssp TSCCCCCCTT--------TTTTCTTCCEEECCSSCCCCCCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcccccChh--------HhcccCCCCEEEcCCCcCCCcChhHhccC-CcccEEECcCCcCCccCHHHcCcCcCCCEEEC
Confidence 5555544221 12334444444444444443322222222 23444444444444333333444444444444
Q ss_pred ccccceecCCcCCcCCCCCCeeecCCCcCC
Q 039957 199 GFNDLNGTIPTSIGTLKQLQGFFLPETNLQ 228 (481)
Q Consensus 199 ~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~ 228 (481)
++|++++..+..|..+++|+.|++++|.+.
T Consensus 163 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 163 STNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 444444433334444444444444444443
No 109
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.1e-23 Score=193.05 Aligned_cols=180 Identities=24% Similarity=0.285 Sum_probs=148.6
Q ss_pred CCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeec
Q 039957 143 YLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFL 222 (481)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 222 (481)
..++++++++.++ .+|..+. +.++.|++++|.+++..|..|.++++|++|++++|.+++..|..|..+++|+.|++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 3566777777776 3444332 46788888888888777777888888888888888888877778888888888888
Q ss_pred CCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCC
Q 039957 223 PETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDS 302 (481)
Q Consensus 223 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 302 (481)
++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|++++..+..+..++.|++|++++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888887778888888899999999998887777788889999999999999877777888888999999999999888
Q ss_pred CCCccccCCcCcEEEccCCeeeee
Q 039957 303 LPSNVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 303 ~p~~~~~l~~L~~L~l~~N~l~~~ 326 (481)
.+..+..+++|+.|++++|++.+.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 777888899999999999999865
No 110
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.90 E-value=7.8e-24 Score=207.74 Aligned_cols=134 Identities=27% Similarity=0.384 Sum_probs=113.8
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCC-----------Cccc
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTP-----------DFKF 405 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----------~~~~ 405 (481)
..|.|+||.||+|.. .+|..||||++.... ....+.+.+|++++++++|||||++++++... .+||
T Consensus 61 ~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~ 140 (398)
T 4b99_A 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL 140 (398)
T ss_dssp EEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEEC
T ss_pred EEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeC
Confidence 348899999999985 578999999986543 23345678899999999999999999877542 1578
Q ss_pred ccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 406 MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 406 ~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+ |+|.+++... ..+++.+...++.||++||+||| +.+||||||||+|||++.++.+||+|||+|+.+
T Consensus 141 ~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH----~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 141 ME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 85 7899988754 46788899999999999999999 678999999999999999999999999999865
No 111
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.89 E-value=2.9e-23 Score=213.64 Aligned_cols=136 Identities=24% Similarity=0.376 Sum_probs=120.0
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.|.|+||.||++.. .+|..||+|.+........+.+.+|+.++++++|||||++++++.... +|||++|+|.++
T Consensus 165 lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~ 244 (573)
T 3uto_A 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK 244 (573)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred EeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHH
Confidence 37899999999985 468999999997765555667889999999999999999999988765 689999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC--CcEEEccccCcccCC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN--MVAHVSDFGISKLLG 480 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~--~~~kl~Dfgl~~~~~ 480 (481)
+......++..+...++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 245 i~~~~~~l~e~~~~~~~~qi~~al~ylH----~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 245 VADEHNKMSEDEAVEYMRQVCKGLCHMH----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp HTCTTSCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 8766567888899999999999999999 6789999999999999854 899999999998764
No 112
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=2.2e-23 Score=213.35 Aligned_cols=186 Identities=25% Similarity=0.320 Sum_probs=106.4
Q ss_pred CCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeec
Q 039957 14 NLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDL 93 (481)
Q Consensus 14 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 93 (481)
+|+.|+|++|++++ +|..+ .++|++|+|++|+|+ .+| . .+++|++|+|++|+|++ +|. +.. +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 66667777776665 34433 256667777777666 566 1 35666677777766665 444 443 6666666
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEE
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFS 173 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~ 173 (481)
++|.+++ +|. .+++|++|++++|.+++++. .+++|++|+|++|++++ +|. +. ++|+.|+
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~------------~l~~L~~L~Ls~N~L~~-lp~-l~---~~L~~L~ 186 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTMLPE------------LPTSLEVLSVRNNQLTF-LPE-LP---ESLEALD 186 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC------------CCTTCCEEECCSSCCSC-CCC-CC---TTCCEEE
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCcCCC------------cCCCcCEEECCCCCCCC-cch-hh---CCCCEEE
Confidence 6666665 444 46666666666666665422 23456666666666665 444 32 4566666
Q ss_pred ccCCceeecCCcccccCCCC-------CeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccC
Q 039957 174 ASECKLKGTIPKEIGHLRGL-------IYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCH 237 (481)
Q Consensus 174 l~~n~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~ 237 (481)
+++|+|+ .+|. +.. +| ++|+|++|+|+ .+|..+..+++|+.|++++|.+++.+|..++.
T Consensus 187 Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 187 VSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp CCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred CcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 6666666 4444 333 44 55555555555 34554555555555555555555555544444
No 113
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.89 E-value=4.1e-23 Score=211.60 Aligned_cols=135 Identities=24% Similarity=0.285 Sum_probs=112.0
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhh---HHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFN---SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~---~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.|.|+||.||++... +|..||+|.+..... ....... .++.+++.++|||||++++++.+.+ +||+++
T Consensus 197 LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~G 276 (689)
T 3v5w_A 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276 (689)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCC
Confidence 478999999999854 689999999975432 1112223 3356677789999999999998775 689999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
|+|.+++... ..++......++.+|+.||+||| +.+||||||||+|||+|++|++||+|||+|+.+.
T Consensus 277 GdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH----~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 277 GDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp CBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999998754 34677888899999999999999 6889999999999999999999999999998653
No 114
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=3.1e-25 Score=231.49 Aligned_cols=176 Identities=13% Similarity=0.043 Sum_probs=76.3
Q ss_pred cCccEEEccCCceeecC-CcccccCCCCCeEeccccccee-cCCcCCcCCCCCCeeecCC---------CcCCCCCCccc
Q 039957 167 TSLQRFSASECKLKGTI-PKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPE---------TNLQGYVPHNL 235 (481)
Q Consensus 167 ~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~---------n~l~~~~p~~~ 235 (481)
++|++|++++|.+++.. +..+..+++|++|++++| +.. .++.....+++|+.|++.. +.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 46777777777655322 222345666667766666 321 1111122355566665522 23322111111
Q ss_pred c-CccCCCeeecCCCeeeecCCcccc-cCCCCCcEEcC--C----CcCcccC-----CcchhccccCcEEEccCcccCCC
Q 039957 236 C-HLEMLNLLHLGGNKLSGHIPPCLA-SLTSLRELDLG--S----NKLTSSI-----PSSLWSLGYILEINLSSNLLNDS 302 (481)
Q Consensus 236 ~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls--~----N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~ 302 (481)
. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++... +..+..++.|+.|++++ .+++.
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 1 245555555555555443333332 34555555555 2 3333111 11133444555555544 33222
Q ss_pred CCCcccc-CCcCcEEEccCCeeeeeccccc-cccCChhhhhccc
Q 039957 303 LPSNVQK-LKVLRVLDLSRNQLSGDIPSTI-GALVDLETISLAG 344 (481)
Q Consensus 303 ~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~~~g 344 (481)
.+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~ 490 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRD 490 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcC
Confidence 2222222 4445555555555443332222 3344555554443
No 115
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.88 E-value=6.2e-23 Score=199.14 Aligned_cols=131 Identities=21% Similarity=0.292 Sum_probs=110.6
Q ss_pred hhhccccccceeeeec----cCCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccC
Q 039957 339 TISLAGSFGSVYKGTI----SDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l----~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
...|+|+||.||+|.. ..+..||+|.+.... ....+.+|++++.++ +|||||++++++...+ +||+++
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 3458999999999964 246789999886543 234567899999988 6999999999887665 689999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC-CcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN-MVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~-~~~kl~Dfgl~~~~ 479 (481)
|+|.+++. .++..+...++.|+++||+||| +.+||||||||+|||++.+ +.+||+|||+|+..
T Consensus 105 ~~L~~~~~----~l~~~~~~~~~~qll~al~ylH----~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 105 ESFLDILN----SLSFQEVREYMLNLFKALKRIH----QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp CCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred ccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999884 3677888899999999999999 6789999999999999886 89999999999754
No 116
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=5.7e-22 Score=177.97 Aligned_cols=180 Identities=24% Similarity=0.259 Sum_probs=111.7
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeeccc
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGF 95 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 95 (481)
+.++.+++.++.+ |..+ .++|++|++++|+++ .+|...+..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 4566667766643 3322 346777777777776 34444333677777777777777755555667777777777777
Q ss_pred CcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEcc
Q 039957 96 NTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSAS 175 (481)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~ 175 (481)
|.+++..+..|.++++|++|++++|+++++++. .+..+++|++|+|++|++++..+..+..+ ++|++|+++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~l~ 156 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDG--------VFDKLTQLKDLRLYQNQLKSVPDGVFDRL-TSLQYIWLH 156 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT--------TTTTCTTCCEEECCSSCCSCCCTTTTTTC-TTCCEEECC
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHh--------HhccCCcCCEEECCCCccceeCHHHhccC-CCccEEEec
Confidence 777766666667777777777777777665332 23456667777777776665444444444 456666666
Q ss_pred CCceeecCCcccccCCCCCeEecccccceecCCcCCcCCC
Q 039957 176 ECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLK 215 (481)
Q Consensus 176 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 215 (481)
+|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 157 ~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 157 DNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp SCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 665543 234566666666666666666655544
No 117
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2.6e-22 Score=180.18 Aligned_cols=181 Identities=20% Similarity=0.186 Sum_probs=130.2
Q ss_pred CCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcc
Q 039957 39 IRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118 (481)
Q Consensus 39 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 118 (481)
-+.++.+++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 9 ~~~v~c~~~~l~-~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCcc-CCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 367888888887 677654 4689999999999987777778899999999999999998777778889999999999
Q ss_pred cccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEec
Q 039957 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSL 198 (481)
Q Consensus 119 ~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 198 (481)
+|++++++.. .+..+++|++|+|++|++++..+..+..+ ++|++|++++|.+++..+..+..+++|++|++
T Consensus 85 ~n~l~~~~~~--------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 85 TNQLQSLPNG--------VFDKLTQLKELALNTNQLQSLPDGVFDKL-TQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL 155 (208)
T ss_dssp SSCCCCCCTT--------TTTTCTTCCEEECCSSCCCCCCTTTTTTC-TTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCcCCccCHh--------HhcCccCCCEEEcCCCcCcccCHhHhccC-CcCCEEECCCCccceeCHHHhccCCCccEEEe
Confidence 9988876432 24567788888888888876555445554 46777777777776555555666666777777
Q ss_pred ccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCcc
Q 039957 199 GFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLE 239 (481)
Q Consensus 199 ~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~ 239 (481)
++|.+.+ .++.|+.|+++.|+++|.+|..++.++
T Consensus 156 ~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 156 HDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred cCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 6665543 234555566666666666665555443
No 118
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.87 E-value=2.7e-22 Score=191.70 Aligned_cols=135 Identities=29% Similarity=0.430 Sum_probs=120.6
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
-+.|+||.||++... +|..+|+|.+........+.+.+|+.++++++||||++++++|.... +||+++|+|.++
T Consensus 18 lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 97 (310)
T 3s95_A 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI 97 (310)
T ss_dssp EECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred ecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHH
Confidence 478999999999864 58899999886655566678899999999999999999999987664 679999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+......+++.++.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 98 l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 158 (310)
T 3s95_A 98 IKSMDSQYPWSQRVSFAKDIASGMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLM 158 (310)
T ss_dssp HHHCCTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCcCeEEECCCCCEEEeecccceec
Confidence 9876667899999999999999999999 578999999999999999999999999999764
No 119
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.87 E-value=2e-22 Score=197.54 Aligned_cols=136 Identities=29% Similarity=0.555 Sum_probs=113.8
Q ss_pred hhccccccceeeeecc----CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCC
Q 039957 340 ISLAGSFGSVYKGTIS----DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~----~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
..+.|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|+||++++++|...+ +||+++|
T Consensus 52 ~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 131 (373)
T 2qol_A 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131 (373)
T ss_dssp EEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCC
Confidence 4478999999999864 46789999987643 334467889999999999999999999998764 6799999
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++......+++.++.+|+.+|++||+||| +.+|+||||||+|||+++++.+||+|||+++.+
T Consensus 132 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp BHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999876667899999999999999999999 578999999999999999999999999999865
No 120
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.87 E-value=5.2e-22 Score=190.70 Aligned_cols=136 Identities=39% Similarity=0.683 Sum_probs=120.0
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
..+.|+||.||+|...+|..||+|..........+.+.+|+.++++++||||++++++|...+ ++|+++|+|.++
T Consensus 46 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 125 (321)
T 2qkw_B 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125 (321)
T ss_dssp CSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGG
T ss_pred eeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHH
Confidence 457899999999998889999999887665555667889999999999999999999997764 678999999999
Q ss_pred hhcCC---CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHN---YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~---~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.... ..++|..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 126 l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp SSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred HhccCCCccccCHHHHHHHHHHHHHHHHHhc----CCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 86532 35889999999999999999999 578999999999999999999999999998753
No 121
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=2.4e-22 Score=205.72 Aligned_cols=188 Identities=24% Similarity=0.304 Sum_probs=97.7
Q ss_pred CccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCC
Q 039957 63 NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCR 142 (481)
Q Consensus 63 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~ 142 (481)
+|++|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|++++|+|++++. +.+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip~----------l~~-- 120 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLPE----------LPA-- 120 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC----------CCT--
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcch----------hhc--
Confidence 44444444444443 333221 34444444444444 233 224445555555554444322 111
Q ss_pred CCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeec
Q 039957 143 YLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFL 222 (481)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 222 (481)
+|++|+|++|.+++ +|. . .++|+.|++++|++++ +|. .+++|++|++++|++++ +|. |. ++|+.|++
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~-l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~L 187 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---L-PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDV 187 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---C-CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEEC
T ss_pred CCCEEECCCCcCCC-CCC---c-CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEEC
Confidence 44555555555544 333 1 2345555555555553 333 34455555555555554 444 43 55666666
Q ss_pred CCCcCCCCCCccccCccCC-------CeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccc
Q 039957 223 PETNLQGYVPHNLCHLEML-------NLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLG 287 (481)
Q Consensus 223 ~~n~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 287 (481)
++|+++. +|. +.. +| +.|+|++|+++ .+|..+..+++|+.|++++|++++.+|..+..+.
T Consensus 188 s~N~L~~-lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 188 STNLLES-LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CSSCCSS-CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred cCCCCCc-hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 6665553 333 333 44 77788888877 3566666678888888888888777777776654
No 122
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.86 E-value=5.8e-22 Score=190.66 Aligned_cols=136 Identities=32% Similarity=0.533 Sum_probs=117.9
Q ss_pred hhccccccceeeeecc----CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCC
Q 039957 340 ISLAGSFGSVYKGTIS----DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~----~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
..+.|+||.||+|... .+..||||.+.... ....+.+.+|+.++++++|+||++++++|.... +||+++|
T Consensus 56 ~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 135 (325)
T 3kul_A 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135 (325)
T ss_dssp EEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTC
T ss_pred EEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCC
Confidence 4478999999999864 23459999987543 334457889999999999999999999987654 6789999
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++......+++.++..++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 136 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS----DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp BHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999776667899999999999999999999 578999999999999999999999999999865
No 123
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.86 E-value=3.8e-22 Score=196.02 Aligned_cols=135 Identities=27% Similarity=0.441 Sum_probs=118.3
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||++++++|...+ +||+++|+|.+
T Consensus 122 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 201 (377)
T 3cbl_A 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201 (377)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred eccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHH
Confidence 478999999999875 68899999986543 233457889999999999999999999997664 67999999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++......+++....+++.+||+||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 202 ~l~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLE----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp HHHHHGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 98866566889999999999999999999 578999999999999999999999999998754
No 124
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.86 E-value=6.5e-22 Score=197.11 Aligned_cols=135 Identities=22% Similarity=0.255 Sum_probs=117.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..+|+|.+..... .....+..|+.++.+++|+||++++++|...+ +||+++|+|
T Consensus 82 LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L 161 (437)
T 4aw2_A 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDL 161 (437)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred EEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcH
Confidence 478999999999875 478899999875322 22345788999999999999999999998765 689999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++......+++..+..++.+|+.||+||| +.+||||||||+|||+|.++++||+|||+|+.+
T Consensus 162 ~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp HHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 9999875567889999999999999999999 578999999999999999999999999999754
No 125
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.86 E-value=2.7e-22 Score=190.25 Aligned_cols=135 Identities=30% Similarity=0.522 Sum_probs=117.6
Q ss_pred hccccccceeeeec-----cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC-------CcccccC
Q 039957 341 SLAGSFGSVYKGTI-----SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP-------DFKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-----~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------~~~~~~~ 408 (481)
-+.|+||.||++.. .+|..||+|.+........+.+.+|+.++++++|+||++++++|... .++|+++
T Consensus 18 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 97 (295)
T 3ugc_A 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97 (295)
T ss_dssp EEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTT
T ss_pred eeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCC
Confidence 37899999999973 35789999998766555567788999999999999999999987543 2679999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++......+++..+.+++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 98 ~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 98 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp CBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred CCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 9999999876667899999999999999999999 578999999999999999999999999999865
No 126
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.86 E-value=1.2e-21 Score=188.68 Aligned_cols=139 Identities=39% Similarity=0.613 Sum_probs=118.2
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchh-hhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRER-AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
..+.|+||.||++...+|..||+|.+...... ....+.+|+.++++++|+||++++++|.... ++|+++|+|.+
T Consensus 37 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 116 (326)
T 3uim_A 37 ILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116 (326)
T ss_dssp EEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHH
T ss_pred eEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHH
Confidence 44789999999999888999999998765432 2346788999999999999999999998765 67899999999
Q ss_pred HhhcCC---CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHN---YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~---~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++.... ..++|..+..|+.++++||+|||..+ .++|+||||||+||++++++.+||+|||+|+..
T Consensus 117 ~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 184 (326)
T 3uim_A 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184 (326)
T ss_dssp HHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEEeccCcccccc
Confidence 987632 34899999999999999999999643 348999999999999999999999999999764
No 127
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.86 E-value=8.7e-24 Score=220.52 Aligned_cols=337 Identities=13% Similarity=0.077 Sum_probs=212.7
Q ss_pred Ccchh-CCCCCCeeeCcCC-ccccc-CChhccCCcCCCEEEeeCCcCccccChhh---hcCCCCccEEEccCcc--cee-
Q 039957 6 PTEIG-NLQNLKSLFLGAN-NLSGL-IPPMIFNISTIRNLNLGGNRLSGHLPSMI---GHSLPNIKYLELGDNN--LIG- 76 (481)
Q Consensus 6 p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~~l~~L~~L~L~~N~--l~~- 76 (481)
+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ...+++|++|++++|. +..
T Consensus 122 ~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~ 201 (594)
T 2p1m_B 122 LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFS 201 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHH
T ss_pred HHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHH
Confidence 34443 5788888888888 45432 34445578888888888888765333322 2246688888888886 221
Q ss_pred ecchhccccccCceeecccC-cceecCcccccCCCCCCEEEcccccC-------cccc----------------CCCccc
Q 039957 77 TIPNSITNATKLIILDLGFN-TFSGHIPNTFGNLRHLSVLSLLMNNL-------TTES----------------SSAYQW 132 (481)
Q Consensus 77 ~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l-------~~~~----------------~~~~~~ 132 (481)
.++..+..+++|++|++++| .+.+ +|..+..+++|++|+++.+.. .++. ... ..
T Consensus 202 ~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~-~~ 279 (594)
T 2p1m_B 202 ALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAV-PA 279 (594)
T ss_dssp HHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCC-GG
T ss_pred HHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccc-hh
Confidence 12222345688888888887 4443 677777888888887654421 1000 000 00
Q ss_pred cccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCcee-ecCCcccccCCCCCeEeccc---------cc
Q 039957 133 SFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLK-GTIPKEIGHLRGLIYLSLGF---------ND 202 (481)
Q Consensus 133 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~---------N~ 202 (481)
.++..+..+++|++|+|++|.+++.....+....++|++|++++| +. ..++.....+++|++|+++. +.
T Consensus 280 ~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~ 358 (594)
T 2p1m_B 280 YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVA 358 (594)
T ss_dssp GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSC
T ss_pred hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCC
Confidence 111222356889999999998765433332222368999999988 43 22333334588899998833 44
Q ss_pred ceecCCcCCc-CCCCCCeeecCCCcCCCCCCcccc-CccCCCeeecC--C----CeeeecC-----CcccccCCCCCcEE
Q 039957 203 LNGTIPTSIG-TLKQLQGFFLPETNLQGYVPHNLC-HLEMLNLLHLG--G----NKLSGHI-----PPCLASLTSLRELD 269 (481)
Q Consensus 203 l~~~~p~~~~-~l~~L~~l~l~~n~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~~-----p~~~~~l~~L~~L~ 269 (481)
+++.....+. .+++|+.|.+..|.+++..+..+. .+++|+.|+++ + |.++... +..+..+++|+.|+
T Consensus 359 l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~ 438 (594)
T 2p1m_B 359 LTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLS 438 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEE
T ss_pred CCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEe
Confidence 4432222222 377888888888888765555554 47888899888 3 4554221 12356778899999
Q ss_pred cCCCcCcccCCcchhc-cccCcEEEccCcccCCCCCCcc-ccCCcCcEEEccCCeeeeeccc-cccccCChhhhhccccc
Q 039957 270 LGSNKLTSSIPSSLWS-LGYILEINLSSNLLNDSLPSNV-QKLKVLRVLDLSRNQLSGDIPS-TIGALVDLETISLAGSF 346 (481)
Q Consensus 270 ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~l~~~g~~ 346 (481)
+++ .++...+..+.. ++.|+.|++++|.+++..+..+ ..+++|+.|++++|+++..... .+..+++|+.|+++++.
T Consensus 439 L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 439 LSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp CCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred ecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 977 666554445544 7889999999988865444333 5678899999999988544333 44557888888887654
No 128
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.86 E-value=1.2e-21 Score=191.95 Aligned_cols=135 Identities=25% Similarity=0.492 Sum_probs=115.0
Q ss_pred hccccccceeeeecc--------CCcceEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----ccc
Q 039957 341 SLAGSFGSVYKGTIS--------DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKF 405 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~--------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~ 405 (481)
.+.|+||.||+|... ++..||+|.+.... ....+.+.+|++++.++ +||||++++++|...+ +||
T Consensus 89 LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~ 168 (370)
T 2psq_A 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 168 (370)
T ss_dssp ESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEc
Confidence 478999999999742 34569999986543 33456788999999999 8999999999987764 679
Q ss_pred ccCCChhHHhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 039957 406 MPNGSLEKRLYSHN---------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHV 470 (481)
Q Consensus 406 ~~~g~l~~~l~~~~---------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl 470 (481)
+++|+|.+++.... ..+++.++.+++.+|++||+||| +.+|+||||||+|||+++++.+||
T Consensus 169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kl 244 (370)
T 2psq_A 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENNVMKI 244 (370)
T ss_dssp CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEE
T ss_pred CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchhhEEECCCCCEEE
Confidence 99999999987532 24788999999999999999999 578999999999999999999999
Q ss_pred ccccCcccC
Q 039957 471 SDFGISKLL 479 (481)
Q Consensus 471 ~Dfgl~~~~ 479 (481)
+|||+|+.+
T Consensus 245 ~DFG~a~~~ 253 (370)
T 2psq_A 245 ADFGLARDI 253 (370)
T ss_dssp CCCSSCEET
T ss_pred ccccCCccc
Confidence 999999854
No 129
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.86 E-value=1.3e-21 Score=187.98 Aligned_cols=133 Identities=26% Similarity=0.402 Sum_probs=117.8
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.++|+||.||+|... +|..||||.+........+.+.+|+.++++++|+||++++++|...+ +||+++|+|.++
T Consensus 53 lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 132 (321)
T 2c30_A 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132 (321)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHH
T ss_pred eccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHH
Confidence 378999999999865 68999999997665555567889999999999999999999887664 679999999998
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.. ..+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 133 l~~--~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 191 (321)
T 2c30_A 133 VSQ--VRLNEEQIATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 191 (321)
T ss_dssp HTT--CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHh--cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCcEEEeeeeeeeec
Confidence 864 35889999999999999999999 578999999999999999999999999998764
No 130
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=192.10 Aligned_cols=135 Identities=25% Similarity=0.441 Sum_probs=115.0
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||++.. .+|..||+|.+........+.+.+|++++.+++|+||++++++|...+ +||+++|+|.++
T Consensus 97 lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~ 176 (373)
T 2x4f_A 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176 (373)
T ss_dssp CC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHH
T ss_pred EecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence 47899999999985 468999999998765555667889999999999999999999998765 679999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee--CCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL--DENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill--~~~~~~kl~Dfgl~~~~ 479 (481)
+......+++..+..++.+|++||+||| +.+|+||||||+|||+ ++++.+||+|||+|+.+
T Consensus 177 l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 177 IIDESYNLTELDTILFMKQICEGIRHMH----QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp HHHTGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 8776667889999999999999999999 5789999999999999 67789999999999865
No 131
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=193.81 Aligned_cols=135 Identities=21% Similarity=0.266 Sum_probs=117.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+.... ......+..|..++.+++|+||+++++++...+ +||+++|+|
T Consensus 69 lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L 148 (412)
T 2vd5_A 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL 148 (412)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcH
Confidence 378999999999864 68999999987532 223456788999999999999999999988765 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++...+..+++..+..++.+|+.||+||| +.+||||||||+|||+|+++++||+|||+|+.+
T Consensus 149 ~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILld~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 149 LTLLSKFGERIPAEMARFYLAEIVMAIDSVH----RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212 (412)
T ss_dssp HHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccCHHHeeecCCCCEEEeechhheec
Confidence 9999765556788889999999999999999 578999999999999999999999999999765
No 132
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.85 E-value=1.5e-21 Score=182.50 Aligned_cols=134 Identities=31% Similarity=0.477 Sum_probs=118.8
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHHh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
.+.|+||.||++...++..||+|.+..... ..+.+.+|++++++++||||+++++++.... ++|+++|+|.+++
T Consensus 18 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 96 (269)
T 4hcu_A 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 96 (269)
T ss_dssp EEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHH
T ss_pred ecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHH
Confidence 378999999999987888899999875432 2356889999999999999999999988764 6799999999999
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
......+++..+..++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 97 ~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 156 (269)
T 4hcu_A 97 RTQRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 156 (269)
T ss_dssp HTTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred HhcCcccCHHHHHHHHHHHHHHHHHHH----hCCeecCCcchheEEEcCCCCEEeccccccccc
Confidence 776667899999999999999999999 578999999999999999999999999999864
No 133
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.85 E-value=1.6e-21 Score=185.15 Aligned_cols=133 Identities=28% Similarity=0.430 Sum_probs=117.1
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||++.. .+|..||+|.+........+.+.+|+.++++++||||+++++++...+ +||+++|+|.++
T Consensus 28 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 107 (297)
T 3fxz_A 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107 (297)
T ss_dssp EEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred eccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHH
Confidence 47899999999984 568999999987765555567888999999999999999999887664 679999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+... .+++.....++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 108 ~~~~--~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 108 VTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp HHHS--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred Hhhc--CCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 8754 4788899999999999999999 578999999999999999999999999998754
No 134
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.85 E-value=1.6e-21 Score=187.59 Aligned_cols=134 Identities=25% Similarity=0.424 Sum_probs=116.2
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
-+.|+||.||+|.. .+|..||+|.+.... ....+.+.+|+.++++++||||+++++++.... +||+++|++.
T Consensus 23 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~ 102 (328)
T 3fe3_A 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 102 (328)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred EeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHH
Confidence 37899999999985 578999999987543 233456788999999999999999999987765 6799999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++... ..++..+...++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 103 ~~l~~~-~~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 103 DYLVAH-GRMKEKEARSKFRQIVSAVQYCH----QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp HHHHHH-CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred HHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 988653 34778889999999999999999 578999999999999999999999999999754
No 135
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.85 E-value=1.2e-21 Score=197.11 Aligned_cols=136 Identities=24% Similarity=0.452 Sum_probs=118.1
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhHHh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEKRL 415 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~~l 415 (481)
..+.|+||.||+|...++..||||.+.... ...+.+.+|+.++++++|||||+++++|.... +||+++|+|.+++
T Consensus 195 ~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l 273 (454)
T 1qcf_A 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL 273 (454)
T ss_dssp EEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHH
T ss_pred EcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCCcHHHHH
Confidence 347899999999998888899999987543 33567889999999999999999999987543 6799999999998
Q ss_pred hcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 416 YSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 416 ~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
... ....++..+.+++.+||+||+||| +.+|+||||||+|||+++++.+||+|||+|+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 274 KSDEGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp HSHHHHTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 753 235678899999999999999999 5789999999999999999999999999998753
No 136
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.85 E-value=2.4e-21 Score=180.98 Aligned_cols=134 Identities=29% Similarity=0.454 Sum_probs=117.9
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHHh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
-+.|+||.||++...++..||+|.+..... ..+.+.+|++++.+++||||++++++|.... ++|+++|+|.+++
T Consensus 16 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 94 (268)
T 3sxs_A 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94 (268)
T ss_dssp EEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHH
T ss_pred eccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHH
Confidence 368999999999888888899999865432 2356888999999999999999999997764 6789999999998
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
......+++..+..++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 95 ~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 154 (268)
T 3sxs_A 95 RSHGKGLEPSQLLEMCYDVCEGMAFLE----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154 (268)
T ss_dssp HHHGGGCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred HHcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCcceEEECCCCCEEEccCccceec
Confidence 776556889999999999999999999 578999999999999999999999999998754
No 137
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.85 E-value=2.9e-21 Score=184.41 Aligned_cols=135 Identities=33% Similarity=0.562 Sum_probs=112.3
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.-+.|+||.||++.. .|..||+|.+.... ....+.+.+|++++++++|+||+++++++...+ +||+++|+|.
T Consensus 44 ~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 122 (309)
T 3p86_A 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122 (309)
T ss_dssp EEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHH
T ss_pred EeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHH
Confidence 347899999999976 58889999986543 233456889999999999999999999987765 6799999999
Q ss_pred HHhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCC--eeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNY--FLDILERLNIMIDVGSTLEYLHHGHSSAP--IIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~--~~~~~~~~~i~~~ia~~l~~lH~~~~~~~--i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++..... .+++..+..++.++++||+||| +.+ |+||||||+||++++++.+||+|||+|+..
T Consensus 123 ~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLH----NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp HHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH----TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99876432 3788999999999999999999 456 999999999999999999999999998753
No 138
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=4.7e-21 Score=181.14 Aligned_cols=188 Identities=22% Similarity=0.282 Sum_probs=107.6
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeeccc
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGF 95 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 95 (481)
..+.+..+.+++..+ +..+++|+.|++++|.++ .+|. +. .+++|++|++++|++++..+ +..+++|++|++++
T Consensus 27 ~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~~-~~-~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 27 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQ-YLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cChh-Hh-cCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 334455555544322 345566666666666665 3443 32 46666666666666654433 56666666666666
Q ss_pred CcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEcc
Q 039957 96 NTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSAS 175 (481)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~ 175 (481)
|.+++. | .+..+++|++|++++|+++.+ ..+..+++|++|++++|++++. +.+..+ ++|+.|+++
T Consensus 100 n~l~~~-~-~l~~l~~L~~L~L~~n~i~~~----------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l-~~L~~L~L~ 164 (291)
T 1h6t_A 100 NKVKDL-S-SLKDLKKLKSLSLEHNGISDI----------NGLVHLPQLESLYLGNNKITDI--TVLSRL-TKLDTLSLE 164 (291)
T ss_dssp SCCCCG-G-GGTTCTTCCEEECTTSCCCCC----------GGGGGCTTCCEEECCSSCCCCC--GGGGGC-TTCSEEECC
T ss_pred CcCCCC-h-hhccCCCCCEEECCCCcCCCC----------hhhcCCCCCCEEEccCCcCCcc--hhhccC-CCCCEEEcc
Confidence 666542 2 366666666666666666554 1234555666666666666543 344444 456666666
Q ss_pred CCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCC
Q 039957 176 ECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQG 229 (481)
Q Consensus 176 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 229 (481)
+|++++..| +..+++|++|++++|.+++ +| .+..+++|+.|++++|.+..
T Consensus 165 ~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 165 DNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 666664433 6666666666666666654 23 36666666666666666654
No 139
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.85 E-value=3.2e-21 Score=188.69 Aligned_cols=133 Identities=17% Similarity=0.271 Sum_probs=110.5
Q ss_pred hhccccccceeeee------ccCCcceEEEEEeccchhhhhhhhHHHHHhhhhc---cCccceeecccCCCC-----ccc
Q 039957 340 ISLAGSFGSVYKGT------ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR---HQNLIKILSSCSTPD-----FKF 405 (481)
Q Consensus 340 l~~~g~~g~vy~~~------l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~-----~~~ 405 (481)
.-+.|+||.||+|. ..++..||+|.+..... ..+..|++++.+++ |+|++++++++...+ +||
T Consensus 72 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~ 148 (365)
T 3e7e_A 72 LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGEL 148 (365)
T ss_dssp EEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECC
T ss_pred EeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEec
Confidence 34789999999993 45688999999865432 34566666666665 999999999987664 689
Q ss_pred ccCCChhHHhhc----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-----------CCcEEE
Q 039957 406 MPNGSLEKRLYS----HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-----------NMVAHV 470 (481)
Q Consensus 406 ~~~g~l~~~l~~----~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-----------~~~~kl 470 (481)
+++|+|.+++.. ....+++..+..|+.+|++||+||| +.+||||||||+|||++. ++.+||
T Consensus 149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH----DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999864 3456899999999999999999999 678999999999999998 899999
Q ss_pred ccccCcccC
Q 039957 471 SDFGISKLL 479 (481)
Q Consensus 471 ~Dfgl~~~~ 479 (481)
+|||+|+.+
T Consensus 225 ~DFG~a~~~ 233 (365)
T 3e7e_A 225 IDLGQSIDM 233 (365)
T ss_dssp CCCTTCEEG
T ss_pred eeCchhhhh
Confidence 999999643
No 140
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.9e-21 Score=186.98 Aligned_cols=135 Identities=28% Similarity=0.400 Sum_probs=115.7
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
..+.|+||.||+|.. .+|..||+|.+..... ...+.+.+|++++++++||||+++++++...+ +||+++|+|.
T Consensus 17 ~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~ 96 (347)
T 3zgw_A 17 TIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96 (347)
T ss_dssp EEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred EEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHH
Confidence 347899999999984 5789999999876432 33456789999999999999999999998765 6799999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++... ..+++.++..++.+|++|++||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 97 ~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 97 DYIISQ-DRLSEEETRVVFRQIVSAVAYVH----SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp HHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred HHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 988653 35788899999999999999999 578999999999999999999999999998754
No 141
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.85 E-value=2.3e-21 Score=186.31 Aligned_cols=135 Identities=27% Similarity=0.440 Sum_probs=112.1
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC---------cccccCCCh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD---------FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---------~~~~~~g~l 411 (481)
-+.|+||.||+|... +..||||++...... ...+..|+.++++++||||+++++++.... +||+++|+|
T Consensus 32 lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L 109 (322)
T 3soc_A 32 KARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSL 109 (322)
T ss_dssp EECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBH
T ss_pred ecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCH
Confidence 378999999999864 789999998654322 334556888999999999999999886532 578999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC------CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH------SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~------~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... .++|..+.+++.++++||+|||..+ ..++|+||||||+|||+++++.+||+|||+|+.+
T Consensus 110 ~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~ 181 (322)
T 3soc_A 110 SDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181 (322)
T ss_dssp HHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred HHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence 9998764 3789999999999999999999320 0128999999999999999999999999999754
No 142
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.85 E-value=2.5e-21 Score=196.79 Aligned_cols=135 Identities=28% Similarity=0.506 Sum_probs=118.0
Q ss_pred hhccccccceeeeeccC-CcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
..+.|+||.||+|.... +..||||.+.... ...+.|.+|+.++++++|+||++++++|.... +||+++|+|.+
T Consensus 227 ~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~ 305 (495)
T 1opk_A 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 305 (495)
T ss_dssp ESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred EecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHH
Confidence 34789999999998764 7889999986543 23467889999999999999999999997764 67999999999
Q ss_pred HhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++... ...+++..+..++.+|++||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 306 ~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 306 YLRECNRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp HHHHSCTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred HHHhcCcCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEEECCCCcEEEeecccceec
Confidence 98763 345889999999999999999999 578999999999999999999999999999875
No 143
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.85 E-value=3.1e-21 Score=186.02 Aligned_cols=135 Identities=24% Similarity=0.394 Sum_probs=112.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCC-----------------
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTP----------------- 401 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----------------- 401 (481)
-++|+||.||+|... +|..||||++..... ...+.+.+|+.++++++||||++++++|...
T Consensus 14 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (332)
T 3qd2_B 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDE 93 (332)
T ss_dssp EECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------
T ss_pred ecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccc
Confidence 378999999999865 789999999875442 3446788999999999999999999876321
Q ss_pred ---------------------------------------------CcccccCCChhHHhhcCC--CccCHHHHHHHHHHH
Q 039957 402 ---------------------------------------------DFKFMPNGSLEKRLYSHN--YFLDILERLNIMIDV 434 (481)
Q Consensus 402 ---------------------------------------------~~~~~~~g~l~~~l~~~~--~~~~~~~~~~i~~~i 434 (481)
.+||+++|+|.+++.... ...++..+.+++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi 173 (332)
T 3qd2_B 94 STDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQI 173 (332)
T ss_dssp --------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHH
T ss_pred cccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHH
Confidence 156889999999987633 335667788999999
Q ss_pred HHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 435 a~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 174 ~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 214 (332)
T 3qd2_B 174 AEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214 (332)
T ss_dssp HHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHHHHH----hCCeeecCCCcccEEEeCCCCEEEeecCccccc
Confidence 99999999 578999999999999999999999999999865
No 144
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=1.8e-21 Score=201.33 Aligned_cols=172 Identities=24% Similarity=0.345 Sum_probs=91.3
Q ss_pred hCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCc
Q 039957 10 GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLI 89 (481)
Q Consensus 10 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 89 (481)
..+++|+.|++++|.+..+ | .+..+++|+.|+|++|++++ +|. +. .+++|++|+|++|++++ +| .+..+++|+
T Consensus 40 ~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~-~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IKP-LT-NLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCC-CGG-GG-GCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCC-Chh-hc-cCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 4455555666666655543 2 35555666666666666553 332 22 45566666666665543 22 455555666
Q ss_pred eeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCc
Q 039957 90 ILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSL 169 (481)
Q Consensus 90 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L 169 (481)
.|+|++|.+++. ..|..+++|+.|+|++|.++++ ..+..+++|+.|+|++|.+++..| +..+ ++|
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l----------~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l-~~L 177 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI----------TVLSRLTKLDTLSLEDNQISDIVP--LAGL-TKL 177 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC----------GGGGSCTTCSEEECCSSCCCCCGG--GTTC-TTC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc----------hhhcccCCCCEEECcCCcCCCchh--hccC-CCC
Confidence 666666655542 2355556666666666655543 123445555566666665554433 4333 355
Q ss_pred cEEEccCCceeecCCcccccCCCCCeEeccccccee
Q 039957 170 QRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNG 205 (481)
Q Consensus 170 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 205 (481)
+.|+|++|.+++. ..+..+++|+.|+|++|.+.+
T Consensus 178 ~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 178 QNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 5555555555532 235555555555555555554
No 145
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.84 E-value=3.7e-21 Score=181.27 Aligned_cols=134 Identities=30% Similarity=0.464 Sum_probs=115.4
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHHh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
.+.|+||.||++...++..||+|.+...... .+.+.+|++++.+++|+||++++++|.... ++|+++|+|.+++
T Consensus 32 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 110 (283)
T 3gen_A 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110 (283)
T ss_dssp CC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHH
T ss_pred cCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHH
Confidence 3689999999999888888999998754322 356888999999999999999999997764 6789999999998
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
......+++.++..++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 111 ~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 170 (283)
T 3gen_A 111 REMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170 (283)
T ss_dssp HCGGGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCccceEEEcCCCCEEEccccccccc
Confidence 765566889999999999999999999 578999999999999999999999999999864
No 146
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.84 E-value=4.5e-21 Score=183.24 Aligned_cols=134 Identities=25% Similarity=0.397 Sum_probs=114.5
Q ss_pred hccccccceeeeeccCCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||++...+|..||+|.+..... .....+.+|++++++++||||+++++++.... +||++ |++.+
T Consensus 29 lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~ 107 (311)
T 3niz_A 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKK 107 (311)
T ss_dssp EEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHH
T ss_pred ccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHH
Confidence 378999999999988899999999865432 23356788999999999999999999998765 56787 58888
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 108 VLDENKTGLQDSQIKIYLYQLLRGVAHCH----QHRILHRDLKPQNLLINSDGALKLADFGLARAF 169 (311)
T ss_dssp HHHTCTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence 87766666888999999999999999999 578999999999999999999999999999764
No 147
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.84 E-value=2e-21 Score=202.38 Aligned_cols=135 Identities=24% Similarity=0.442 Sum_probs=118.4
Q ss_pred hccccccceeeeecc---CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS---DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~---~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~ 412 (481)
.+.|+||.||+|... ++..||||.+..... ...+.+.+|++++++++|+|||+++++|.... +||+++|+|.
T Consensus 344 LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L~ 423 (613)
T 2ozo_A 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLH 423 (613)
T ss_dssp EEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBHH
T ss_pred EecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcHH
Confidence 378999999999764 456799999876432 34567889999999999999999999997654 6799999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++......+++..+..|+.+|++||+||| +.+|+||||||+|||+++++.+||+|||+|+.+
T Consensus 424 ~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 424 KFLVGKREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp HHHTTCTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred HHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999876667899999999999999999999 578999999999999999999999999999875
No 148
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=2.4e-21 Score=200.51 Aligned_cols=190 Identities=23% Similarity=0.315 Sum_probs=96.7
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
+..+.++.+.+....+ +..+++|+.|++++|.++ .+|. +. .+++|++|+|++|++++..| +..+++|+.|+|+
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~-l~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQ-YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTT-GG-GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChH-Hc-cCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 4444555555544333 345555566666666554 3442 22 45555556655555554333 5555555555555
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEc
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSA 174 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l 174 (481)
+|.+++ +| .|..+++|+.|+|++|.++.+ +.+..+++|+.|+|++|.+
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l----------~~l~~l~~L~~L~Ls~N~l-------------------- 143 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI----------NGLVHLPQLESLYLGNNKI-------------------- 143 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC----------GGGGGCTTCSEEECCSSCC--------------------
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC----------ccccCCCccCEEECCCCcc--------------------
Confidence 555553 12 355555555555555555443 1123344444444444444
Q ss_pred cCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeec
Q 039957 175 SECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGH 254 (481)
Q Consensus 175 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 254 (481)
++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+.
T Consensus 144 -----~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 144 -----TDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -----CCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred -----CCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 432 334455555555555555554433 55555555555555555543 2355556666666666666543
No 149
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.84 E-value=1.3e-21 Score=188.45 Aligned_cols=135 Identities=28% Similarity=0.480 Sum_probs=111.0
Q ss_pred hccccccceeeeec-cCCcc----eEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTD----VAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~----vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~ 410 (481)
.+.|+||.||+|.. .+|.. |++|.+.... ....+.+.+|+.++++++|+||++++++|.... ++|+++|+
T Consensus 23 lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~g~ 102 (327)
T 3poz_A 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGC 102 (327)
T ss_dssp EEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEEECCTTCB
T ss_pred EeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCc
Confidence 47899999999985 34544 4777764432 234467889999999999999999999998765 56899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++......+++..+.+++.++++||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 103 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp HHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999876677899999999999999999999 578999999999999999999999999998754
No 150
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.84 E-value=5.8e-21 Score=187.64 Aligned_cols=136 Identities=23% Similarity=0.392 Sum_probs=118.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||+|... +|..+|+|.+..........+.+|+.++.+++|+||+++++++.... +||+++|+|.++
T Consensus 59 LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 138 (387)
T 1kob_A 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDR 138 (387)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred EecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHH
Confidence 478999999999864 68899999987665444557889999999999999999999987764 679999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC--CCcEEEccccCcccCC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE--NMVAHVSDFGISKLLG 480 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~--~~~~kl~Dfgl~~~~~ 480 (481)
+......+++.++..++.+|++||+||| +.+|+||||||+|||++. .+.+||+|||+|+.+.
T Consensus 139 l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 139 IAAEDYKMSEAEVINYMRQACEGLKHMH----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp TTCTTCCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred HHhhcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 8876667899999999999999999999 578999999999999974 5789999999998653
No 151
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.84 E-value=3e-21 Score=190.81 Aligned_cols=133 Identities=20% Similarity=0.257 Sum_probs=114.6
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..+|+|.+.... ......+..|+.+++.++|||||+++++|.+.. +||+++|+|
T Consensus 77 LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L 156 (410)
T 3v8s_A 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 156 (410)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred EEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 378999999999865 58899999986532 122345778999999999999999999998765 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... .++...+..++.+|+.||+||| +.+||||||||+|||+|.++++||+|||+|+.+
T Consensus 157 ~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 157 VNLMSNY--DVPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp HHHHHHC--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 9988754 4677888899999999999999 578999999999999999999999999999764
No 152
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.84 E-value=3.8e-21 Score=185.03 Aligned_cols=135 Identities=25% Similarity=0.478 Sum_probs=113.9
Q ss_pred hccccccceeeeec-cCCcc----eEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTD----VAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~----vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~ 410 (481)
.+.|+||.||+|.. .+|.. |++|.+.... ......+.+|+.++++++|+||++++++|.... ++|+++|+
T Consensus 21 lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 100 (325)
T 3kex_A 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGS 100 (325)
T ss_dssp EECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEECCTTCB
T ss_pred eeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEeCCCCC
Confidence 47899999999985 34554 6677664332 233456788999999999999999999987554 57899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++......+++..+..++.++++||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 101 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 101 LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp SHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH----HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred HHHHHHHccccCCHHHHHHHHHHHHHHHHHHH----hCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99998876567888899999999999999999 578999999999999999999999999999865
No 153
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.84 E-value=5.7e-21 Score=183.31 Aligned_cols=134 Identities=22% Similarity=0.369 Sum_probs=116.7
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
-+.|+||.||++... +|..+|+|.+.... .....+.+|+.++..++||||+++++++...+ +||+++|+|.++
T Consensus 13 lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (321)
T 1tki_A 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFER 91 (321)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHH
T ss_pred EecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHH
Confidence 378999999999854 57889999886543 23456788999999999999999999987664 679999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC--CCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE--NMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~--~~~~kl~Dfgl~~~~ 479 (481)
+......+++.++..++.++++||+||| +.+|+||||||+||+++. ++.+||+|||+++.+
T Consensus 92 l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 92 INTSAFELNEREIVSYVHQVCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp HTSSSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9776667889999999999999999999 578999999999999987 799999999999865
No 154
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2.2e-20 Score=168.93 Aligned_cols=153 Identities=22% Similarity=0.265 Sum_probs=100.9
Q ss_pred EEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCe
Q 039957 171 RFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNK 250 (481)
Q Consensus 171 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 250 (481)
.++++++.++ .+|..+. ++++.|++++|++++..+..|..+++|+.|++++|++++..|..|..+++|+.|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 2343332 355566666666655555556666666666666666666566666666666666777776
Q ss_pred eeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeee
Q 039957 251 LSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 251 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 326 (481)
+++..+..|..+++|++|++++|++++..|..|..++.|+.|++++|.+++..+..+..+++|+.|++++|++.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 6665555666777777777777777766677777777777777777777777677777888888888888888764
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.84 E-value=2.8e-21 Score=189.23 Aligned_cols=136 Identities=25% Similarity=0.495 Sum_probs=110.8
Q ss_pred hhccccccceeeeeccC--C--cceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC------cccccC
Q 039957 340 ISLAGSFGSVYKGTISD--G--TDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD------FKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~--g--~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~~~~ 408 (481)
..++|+||.||+|...+ + ..+|+|.+.... ....+.+.+|+.++++++||||++++++|...+ +||+++
T Consensus 96 ~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~ 175 (373)
T 3c1x_A 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 175 (373)
T ss_dssp EEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTT
T ss_pred EeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCC
Confidence 44789999999998642 2 358889876432 334567889999999999999999999875432 579999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.......++.+...++.+|++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 176 g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 176 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp CBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred CCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999876667889999999999999999999 578999999999999999999999999999754
No 156
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.84 E-value=6.7e-21 Score=182.41 Aligned_cols=134 Identities=29% Similarity=0.363 Sum_probs=115.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..+|+|.+..... ...+.+.+|+.+++.++||||+++++++.... +||+++|+|
T Consensus 14 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L 93 (318)
T 1fot_A 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL 93 (318)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCH
Confidence 378999999999864 689999999875432 23455778999999999999999999987765 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+..
T Consensus 94 ~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 94 FSLLRKS-QRFPNPVAKFYAAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp HHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred HHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 9998754 35678888999999999999999 678999999999999999999999999999764
No 157
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=7.7e-21 Score=179.68 Aligned_cols=189 Identities=22% Similarity=0.276 Sum_probs=119.1
Q ss_pred CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 38 TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 38 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
++..+.+..+.+++..+.. .+++|++|++++|.+... + .+..+++|++|++++|.+++..+ +..+++|++|++
T Consensus 25 ~~~~~~l~~~~~~~~~~~~---~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVTQN---ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHTTCSCTTSEECHH---HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHHHHhcCCCcccccchh---hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 3445556667666433322 467888888888888643 3 37788888888888888886554 888888888888
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEe
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLS 197 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 197 (481)
++|.++.++ .+..+++|++|++++|++++. +.+..+ ++|+.|++++|++++. ..+..+++|++|+
T Consensus 98 ~~n~l~~~~----------~l~~l~~L~~L~L~~n~i~~~--~~l~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 98 DENKVKDLS----------SLKDLKKLKSLSLEHNGISDI--NGLVHL-PQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp CSSCCCCGG----------GGTTCTTCCEEECTTSCCCCC--GGGGGC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCcCCCCh----------hhccCCCCCEEECCCCcCCCC--hhhcCC-CCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 888887652 256677788888888877753 344444 4566666666666643 3455666666666
Q ss_pred cccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeee
Q 039957 198 LGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLS 252 (481)
Q Consensus 198 l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 252 (481)
+++|++++..| +..+++|+.|++++|.+++. | .+..+++|+.|++++|+++
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 66666654333 55555555555555555442 1 2444455555555555444
No 158
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.84 E-value=2.4e-23 Score=214.13 Aligned_cols=188 Identities=18% Similarity=0.148 Sum_probs=111.3
Q ss_pred CCCCccEEEccCccceeecchhccccccCceeecccCc-------------ceecCcccccCCCCCCEEE-cccccCccc
Q 039957 60 SLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNT-------------FSGHIPNTFGNLRHLSVLS-LLMNNLTTE 125 (481)
Q Consensus 60 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~ 125 (481)
..++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-- 423 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-- 423 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH--
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc--
Confidence 4567777777777775 667777777777777776654 3445555566666666665 4444332
Q ss_pred cCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEeccccccee
Q 039957 126 SSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNG 205 (481)
Q Consensus 126 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 205 (481)
.|..+.+++|.++...+ ..|+.|++++|.+++ +|. ++.+++|+.|+|++|.++
T Consensus 424 -----------------~L~~l~l~~n~i~~l~~-------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~- 476 (567)
T 1dce_A 424 -----------------DLRSKFLLENSVLKMEY-------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR- 476 (567)
T ss_dssp -----------------HHHHHHHHHHHHHHHHH-------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-
T ss_pred -----------------hhhhhhhhcccccccCc-------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-
Confidence 13334455555543211 236666666666664 454 666666666666666665
Q ss_pred cCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecC-CcccccCCCCCcEEcCCCcCcccC
Q 039957 206 TIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHI-PPCLASLTSLRELDLGSNKLTSSI 279 (481)
Q Consensus 206 ~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~ 279 (481)
.+|..++.+++|+.|++++|++++ +| .++.+++|+.|+|++|++++.. |..|..+++|+.|++++|++++.+
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 556666666666666666666655 33 5555666666666666665554 555666666666666666655443
No 159
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=9.2e-21 Score=184.94 Aligned_cols=158 Identities=22% Similarity=0.169 Sum_probs=88.0
Q ss_pred CccEEEccCCceeecCCcccc-cCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeec
Q 039957 168 SLQRFSASECKLKGTIPKEIG-HLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHL 246 (481)
Q Consensus 168 ~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 246 (481)
.++.|++++|++++..+..+. .+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 345555555555544444444 5555555555555555555555555555555555555555555555555566666666
Q ss_pred CCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcch---hccccCcEEEccCcccCCCCCCccccCCc--CcEEEccCC
Q 039957 247 GGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSL---WSLGYILEINLSSNLLNDSLPSNVQKLKV--LRVLDLSRN 321 (481)
Q Consensus 247 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~~p~~~~~l~~--L~~L~l~~N 321 (481)
++|++++..|..|..+++|+.|+|++|++++..+..+ ..++.|+.|++++|++++..+..+..++. ++.|++++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 6666655555556666666666666666654333333 34556666666666665544445555554 356666666
Q ss_pred eeee
Q 039957 322 QLSG 325 (481)
Q Consensus 322 ~l~~ 325 (481)
++.+
T Consensus 200 ~~~C 203 (361)
T 2xot_A 200 PLEC 203 (361)
T ss_dssp CEEC
T ss_pred CccC
Confidence 6654
No 160
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.84 E-value=4.5e-21 Score=181.22 Aligned_cols=135 Identities=24% Similarity=0.424 Sum_probs=117.4
Q ss_pred hccccccceeeeeccC-C-------cceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----ccccc
Q 039957 341 SLAGSFGSVYKGTISD-G-------TDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~-g-------~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~ 407 (481)
.+.|+||.||++.... + ..||+|.+........+.+.+|+.++++++|+||++++++|...+ +||++
T Consensus 16 lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 95 (289)
T 4fvq_A 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVK 95 (289)
T ss_dssp EEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCT
T ss_pred eccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCC
Confidence 3689999999997543 3 469999987665555677889999999999999999999998764 67999
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc--------EEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV--------AHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~--------~kl~Dfgl~~~~ 479 (481)
+|+|.+++......+++..+.+++.++++||+||| +.+|+||||||+||+++.++. +||+|||+++..
T Consensus 96 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~ 171 (289)
T 4fvq_A 96 FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE----ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171 (289)
T ss_dssp TCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh----hCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence 99999999876666889999999999999999999 578999999999999998887 999999999764
No 161
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.84 E-value=2e-23 Score=214.68 Aligned_cols=204 Identities=20% Similarity=0.176 Sum_probs=160.4
Q ss_pred cCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcc-------------ceeecchhccccccCceee-cccCcce
Q 039957 34 FNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNN-------------LIGTIPNSITNATKLIILD-LGFNTFS 99 (481)
Q Consensus 34 ~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~ 99 (481)
..+++|+.|+|++|+++ .+|..++ .+++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~-~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELE-SCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHH-HHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 45677777888888876 6777776 57777877776664 5677888899999999999 7777653
Q ss_pred ecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCce
Q 039957 100 GHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKL 179 (481)
Q Consensus 100 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l 179 (481)
.|+.+.+++|.++.++. ..|+.|+|++|.+++ +|. ++.+ ++|+.|++++|.+
T Consensus 424 -----------~L~~l~l~~n~i~~l~~--------------~~L~~L~Ls~n~l~~-lp~-~~~l-~~L~~L~Ls~N~l 475 (567)
T 1dce_A 424 -----------DLRSKFLLENSVLKMEY--------------ADVRVLHLAHKDLTV-LCH-LEQL-LLVTHLDLSHNRL 475 (567)
T ss_dssp -----------HHHHHHHHHHHHHHHHH--------------TTCSEEECTTSCCSS-CCC-GGGG-TTCCEEECCSSCC
T ss_pred -----------hhhhhhhhcccccccCc--------------cCceEEEecCCCCCC-CcC-cccc-ccCcEeecCcccc
Confidence 34455667777776532 137888888888886 565 7766 5799999999998
Q ss_pred eecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCC-CccccCccCCCeeecCCCeeeecCCcc
Q 039957 180 KGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYV-PHNLCHLEMLNLLHLGGNKLSGHIPPC 258 (481)
Q Consensus 180 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 258 (481)
+ .+|..++.+++|++|+|++|++++ +| .++.+++|+.|++++|++++.. |..+..+++|+.|+|++|.+++.+|..
T Consensus 476 ~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 476 R-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp C-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred c-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 8 788889999999999999999986 56 7889999999999999999887 889999999999999999998765532
Q ss_pred ---cccCCCCCcEEc
Q 039957 259 ---LASLTSLRELDL 270 (481)
Q Consensus 259 ---~~~l~~L~~L~l 270 (481)
+..+++|+.|++
T Consensus 553 ~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 553 ERLAEMLPSVSSILT 567 (567)
T ss_dssp THHHHHCTTCSEEEC
T ss_pred HHHHHHCcccCccCC
Confidence 334778888764
No 162
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.84 E-value=2.7e-21 Score=194.49 Aligned_cols=135 Identities=29% Similarity=0.523 Sum_probs=116.3
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhHHh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEKRL 415 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~~l 415 (481)
..+.|+||.||+|....+..||||.+.... ...+.+.+|++++++++||||++++++|.... +||+++|+|.+++
T Consensus 191 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l 269 (452)
T 1fmk_A 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 269 (452)
T ss_dssp EEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHH
T ss_pred eecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCCCHHHHH
Confidence 347899999999998877889999987543 22456889999999999999999999987643 6799999999998
Q ss_pred hcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 416 YSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 416 ~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
... ...+++.++.+++.+||+||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 270 ~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 270 KGETGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEECCCCCEEECCCccceec
Confidence 752 345788999999999999999999 578999999999999999999999999999865
No 163
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.84 E-value=4.9e-21 Score=184.75 Aligned_cols=133 Identities=26% Similarity=0.332 Sum_probs=114.6
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..+|+|.+.... ......+..|+.++.+++||||+++++++...+ +||+++|+|
T Consensus 13 lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L 92 (337)
T 1o6l_A 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 92 (337)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred EecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcH
Confidence 378999999999854 68999999987542 223456778999999999999999999988765 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
..++... ..++......++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+.
T Consensus 93 ~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 154 (337)
T 1o6l_A 93 FFHLSRE-RVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154 (337)
T ss_dssp HHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCCHHHEEECCCCCEEEeeccchhh
Confidence 9988653 35678888999999999999999 57899999999999999999999999999985
No 164
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.84 E-value=6.3e-21 Score=191.66 Aligned_cols=132 Identities=33% Similarity=0.491 Sum_probs=114.7
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC------cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD------FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~~~~g~l~~~ 414 (481)
.+.|+||.||+|... |..||||.+.... ..+.+.+|+.++++++|+||++++++|.... +||+++|+|.++
T Consensus 201 lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~ 277 (450)
T 1k9a_A 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 277 (450)
T ss_dssp EEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHH
T ss_pred ecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHH
Confidence 378999999999874 7899999987543 3467889999999999999999999876543 679999999999
Q ss_pred hhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.... ..+++..+.+++.+||+||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 278 l~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 278 LRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp HHHHCTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 87643 34688899999999999999999 578999999999999999999999999998754
No 165
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=2.4e-20 Score=168.70 Aligned_cols=155 Identities=19% Similarity=0.184 Sum_probs=86.4
Q ss_pred cEEEccCCccceeCChhhhhcccCccEEEccCCceeecCC-cccccCCCCCeEecccccceecCCcCCcCCCCCCeeecC
Q 039957 145 VYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIP-KEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLP 223 (481)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 223 (481)
+.+++++|.++. +|..+. ..+++|++++|++++..| ..|..+++|++|++++|+++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~------------------- 70 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT------------------- 70 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-------------------
T ss_pred CEeEeCCCCccc-CccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-------------------
Confidence 356666666553 343332 234555555555554432 23444555555555555554
Q ss_pred CCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCC
Q 039957 224 ETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSL 303 (481)
Q Consensus 224 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 303 (481)
+..+..|..+++|+.|+|++|++++..|..|..+++|++|++++|++++..|..|..+++|++|++++|++++..
T Consensus 71 -----~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 71 -----DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp -----EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred -----EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 444444555555555555555555555555555555555555555555555555555566666666666666656
Q ss_pred CCccccCCcCcEEEccCCeeeeec
Q 039957 304 PSNVQKLKVLRVLDLSRNQLSGDI 327 (481)
Q Consensus 304 p~~~~~l~~L~~L~l~~N~l~~~~ 327 (481)
|..|..+++|+.|++++|++.+..
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSG
T ss_pred HHHhcCCCCCCEEEecCcCCcCCC
Confidence 666667777777777777777643
No 166
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.84 E-value=3.9e-21 Score=187.53 Aligned_cols=135 Identities=29% Similarity=0.499 Sum_probs=114.3
Q ss_pred hccccccceeeeec------cCCcceEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC------cccc
Q 039957 341 SLAGSFGSVYKGTI------SDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD------FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l------~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~~~~ 406 (481)
.+.|+||.||++.. .++..||||.+.... ....+.+.+|++++.++ +||||++++++|...+ +||+
T Consensus 30 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~ 109 (359)
T 3vhe_A 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 109 (359)
T ss_dssp EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECC
T ss_pred ecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEec
Confidence 47899999999963 346789999987543 23345688999999999 7899999999987653 5799
Q ss_pred cCCChhHHhhcCCC-----------------------------------------------------------------c
Q 039957 407 PNGSLEKRLYSHNY-----------------------------------------------------------------F 421 (481)
Q Consensus 407 ~~g~l~~~l~~~~~-----------------------------------------------------------------~ 421 (481)
++|+|.+++..... .
T Consensus 110 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T 3vhe_A 110 KFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 189 (359)
T ss_dssp TTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTC
T ss_pred CCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccc
Confidence 99999999875321 2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 422 LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 422 ~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 788899999999999999999 578999999999999999999999999999864
No 167
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.84 E-value=6.9e-21 Score=183.28 Aligned_cols=135 Identities=30% Similarity=0.532 Sum_probs=117.9
Q ss_pred hccccccceeeeec-----cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-------cccccC
Q 039957 341 SLAGSFGSVYKGTI-----SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-----~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~~ 408 (481)
.+.|+||.||++.. .+|..||+|.+........+.+.+|+.++++++|+||+++++++...+ ++|+++
T Consensus 49 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 128 (326)
T 2w1i_A 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128 (326)
T ss_dssp EECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTT
T ss_pred eccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCC
Confidence 47899999999973 358899999987765555667889999999999999999999876542 578999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++......+++.++.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 129 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 129 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 9999999876666899999999999999999999 578999999999999999999999999999765
No 168
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2e-20 Score=169.17 Aligned_cols=152 Identities=23% Similarity=0.302 Sum_probs=87.9
Q ss_pred CEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEccc
Q 039957 40 RNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLM 119 (481)
Q Consensus 40 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 119 (481)
+.+++++|.++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|+++++.|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 45555666665 4555432 4566666666666655555666666666666666666666666666666666666666
Q ss_pred ccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeEecc
Q 039957 120 NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLG 199 (481)
Q Consensus 120 N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 199 (481)
|+++.++... +..+++|++|+|++|++++..|..|..+ ++|+.|++++|++++..+..|..+++|++|+++
T Consensus 90 N~l~~l~~~~--------f~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 160 (220)
T 2v9t_B 90 NKITELPKSL--------FEGLFSLQLLLLNANKINCLRVDAFQDL-HNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLA 160 (220)
T ss_dssp SCCCCCCTTT--------TTTCTTCCEEECCSSCCCCCCTTTTTTC-TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CcCCccCHhH--------ccCCCCCCEEECCCCCCCEeCHHHcCCC-CCCCEEECCCCcCCEECHHHHhCCCCCCEEEeC
Confidence 6666553322 3445556666666666655555545444 345555555555555444555556666666666
Q ss_pred cccce
Q 039957 200 FNDLN 204 (481)
Q Consensus 200 ~N~l~ 204 (481)
+|.+.
T Consensus 161 ~N~~~ 165 (220)
T 2v9t_B 161 QNPFI 165 (220)
T ss_dssp SSCEE
T ss_pred CCCcC
Confidence 66654
No 169
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.84 E-value=7.7e-21 Score=187.05 Aligned_cols=136 Identities=26% Similarity=0.472 Sum_probs=115.6
Q ss_pred hhccccccceeeeecc--------CCcceEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cc
Q 039957 340 ISLAGSFGSVYKGTIS--------DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FK 404 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~--------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~ 404 (481)
..+.|+||.||+|... .+..||+|++.... ....+.+.+|++++.++ +|+||++++++|...+ +|
T Consensus 76 ~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e 155 (382)
T 3tt0_A 76 PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 155 (382)
T ss_dssp EEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEE
Confidence 3478999999999742 23569999986543 33446788999999999 8999999999998764 67
Q ss_pred cccCCChhHHhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEE
Q 039957 405 FMPNGSLEKRLYSHN---------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAH 469 (481)
Q Consensus 405 ~~~~g~l~~~l~~~~---------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~k 469 (481)
|+++|+|.+++.... ..+++..+.+|+.+|++||+||| +.+|+||||||+|||+++++.+|
T Consensus 156 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 156 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp CCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEE
T ss_pred ecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCcceEEEcCCCcEE
Confidence 999999999987532 34889999999999999999999 57899999999999999999999
Q ss_pred EccccCcccC
Q 039957 470 VSDFGISKLL 479 (481)
Q Consensus 470 l~Dfgl~~~~ 479 (481)
|+|||+|+..
T Consensus 232 L~DFG~a~~~ 241 (382)
T 3tt0_A 232 IADFGLARDI 241 (382)
T ss_dssp ECSCSCCCCS
T ss_pred EcccCccccc
Confidence 9999999865
No 170
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.84 E-value=7e-21 Score=181.56 Aligned_cols=134 Identities=31% Similarity=0.559 Sum_probs=115.0
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~ 413 (481)
..+.|+||.||+|... ..+++|.++... ....+.+.+|++++++++|+||+++++++.... ++|+++|+|.+
T Consensus 43 ~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~ 120 (307)
T 3lb7_A 43 RIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYK 120 (307)
T ss_dssp EEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHH
T ss_pred EecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEecCCCCcHHH
Confidence 3478999999999753 458888876532 234467889999999999999999999887654 67899999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++......+++.++.+|+.+|++||+||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 121 ~l~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 121 HLHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp HHHTSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 99866677899999999999999999999 578999999999999999999999999999753
No 171
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=6.7e-21 Score=185.92 Aligned_cols=176 Identities=25% Similarity=0.218 Sum_probs=94.1
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhc-CCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGH-SLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
+++++++|+++. +|..+. ..++.|+|++|+|++ ++...+. .+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 456666666654 333332 235666666666653 3333332 46666666666666665555566666666666666
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhh---hhcccCccE
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSI---GNFSTSLQR 171 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~~~~~L~~ 171 (481)
+|+|++..+..|.++++|++|+|++|+|+.+.+. .+.++++|++|+|++|++++..+..+ ..+ ++|+.
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~--------~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l-~~L~~ 167 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN--------AFEDMAQLQKLYLSQNQISRFPVELIKDGNKL-PKLML 167 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT--------TTTTCTTCCEEECCSSCCCSCCGGGTC----C-TTCCE
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHH--------HhCCcccCCEEECCCCcCCeeCHHHhcCcccC-CcCCE
Confidence 6666665555666666666666666666655322 23455566666666666654222222 122 34555
Q ss_pred EEccCCceeecCCcccccCCC--CCeEecccccce
Q 039957 172 FSASECKLKGTIPKEIGHLRG--LIYLSLGFNDLN 204 (481)
Q Consensus 172 L~l~~n~l~~~~p~~~~~l~~--L~~L~l~~N~l~ 204 (481)
|++++|++++..+..+..++. ++.|++++|.+.
T Consensus 168 L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp EECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred EECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 555555555433334444443 245555555544
No 172
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.84 E-value=8e-21 Score=186.11 Aligned_cols=134 Identities=27% Similarity=0.410 Sum_probs=115.7
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..+|+|.+.... ....+.+.+|+.++.+++|||||+++++|.... ++|+++|+|
T Consensus 23 LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L 102 (384)
T 4fr4_A 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL 102 (384)
T ss_dssp EECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred EeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcH
Confidence 378999999999854 57889999986543 223456778999999999999999999988765 678999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
..++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||+++++.+||+|||+|+.+
T Consensus 103 ~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 103 RYHLQQN-VHFKEETVKLFICELVMALDYLQ----NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp HHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 9988753 45788899999999999999999 578999999999999999999999999999865
No 173
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.83 E-value=4.7e-21 Score=184.52 Aligned_cols=135 Identities=28% Similarity=0.431 Sum_probs=117.9
Q ss_pred hccccccceeeeec-----cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-------cccccC
Q 039957 341 SLAGSFGSVYKGTI-----SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-----~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~~ 408 (481)
.+.|+||.||++.. .++..||+|.+........+.+.+|++++++++|+||+++++++...+ +||+++
T Consensus 31 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 110 (327)
T 3lxl_A 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110 (327)
T ss_dssp EEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTT
T ss_pred ccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCC
Confidence 37899999999973 357889999997766555667899999999999999999999875432 678999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 111 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG----SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 9999998765556889999999999999999999 578999999999999999999999999999864
No 174
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.83 E-value=1.8e-20 Score=176.88 Aligned_cols=136 Identities=32% Similarity=0.529 Sum_probs=116.6
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccchh-------hhhhhhHHHHHhhhhccCccceeecccCCCC---cccccC
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRER-------AFRSFNSECEVLRNVRHQNLIKILSSCSTPD---FKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---~~~~~~ 408 (481)
..+.|+||.||++.. .++..||+|.+...... ..+.+.+|+.++++++|+||+++++++.... ++|+++
T Consensus 26 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 4f0f_A 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC 105 (287)
T ss_dssp ECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEEEEECCTT
T ss_pred ccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeEEEEecCC
Confidence 347899999999986 46889999998654321 1256788999999999999999999987765 679999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCC--eeeCCCCCCCeeeCCCCc-----EEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP--IIHCDLKPTSILLDENMV-----AHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~--i~H~dlk~~nill~~~~~-----~kl~Dfgl~~~~ 479 (481)
|+|.+.+......+++..+..++.++++|++||| +.+ |+||||||+||+++.++. +||+|||+|+..
T Consensus 106 ~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~ 179 (287)
T 4f0f_A 106 GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ----NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179 (287)
T ss_dssp CBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCC
T ss_pred CCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccc
Confidence 9999998877777899999999999999999999 456 999999999999988776 999999998754
No 175
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.83 E-value=8e-21 Score=180.03 Aligned_cols=134 Identities=26% Similarity=0.405 Sum_probs=115.9
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
-+.|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++.+++||||+++++++...+ +||+++|+|
T Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L 98 (294)
T 4eqm_A 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98 (294)
T ss_dssp EEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCH
Confidence 47899999999985 468899999885432 233457889999999999999999999987765 678999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 99 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 99 SEYIESH-GPLSVDTAINFTNQILDGIKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp HHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9998753 35788999999999999999999 578999999999999999999999999999865
No 176
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.83 E-value=9.9e-21 Score=179.72 Aligned_cols=136 Identities=25% Similarity=0.486 Sum_probs=114.7
Q ss_pred hhccccccceeeeeccCC----cceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC------cccccC
Q 039957 340 ISLAGSFGSVYKGTISDG----TDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD------FKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g----~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~~~~ 408 (481)
.-+.|+||.||+|...+. ..+|+|.+.... ....+.+.+|+.++++++|+||++++++|...+ ++|+++
T Consensus 32 ~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~ 111 (298)
T 3f66_A 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 111 (298)
T ss_dssp EEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTT
T ss_pred eeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCC
Confidence 347899999999985432 357888876533 334467889999999999999999999875443 678999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.......++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 112 ~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 112 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp CBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEECCCCCEEECcccccccc
Confidence 9999999876667889999999999999999999 578999999999999999999999999999764
No 177
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.83 E-value=8.2e-21 Score=182.42 Aligned_cols=134 Identities=23% Similarity=0.391 Sum_probs=113.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||++... ++..||+|.+..... ...+.+.+|+.++++++|+||+++++++...+ +||+++|+|.+
T Consensus 15 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (323)
T 3tki_A 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94 (323)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGG
T ss_pred EecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHH
Confidence 478999999999854 688999999875443 23456788999999999999999999998765 67899999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++... ..+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 95 ~l~~~-~~~~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 95 RIEPD-IGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (323)
T ss_dssp GSBTT-TBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHhhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccccchHHEEEeCCCCEEEEEeecccee
Confidence 88643 45788999999999999999999 578999999999999999999999999999754
No 178
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.83 E-value=8.8e-21 Score=177.01 Aligned_cols=134 Identities=30% Similarity=0.455 Sum_probs=118.2
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHHh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
.+.|+||.||++...++..+|+|.+..... ..+.+.+|++++.+++||||+++++++...+ ++|+++|+|.+++
T Consensus 16 lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 94 (267)
T 3t9t_A 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL 94 (267)
T ss_dssp EEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHH
T ss_pred ecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHH
Confidence 368999999999987888999999875432 2356888999999999999999999987764 6789999999999
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
......+++..+.+++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 154 (267)
T 3t9t_A 95 RTQRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154 (267)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred hhCcccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEECCCCCEEEccccccccc
Confidence 876667889999999999999999999 578999999999999999999999999999764
No 179
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.83 E-value=1.3e-20 Score=183.42 Aligned_cols=136 Identities=25% Similarity=0.360 Sum_probs=116.2
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchh------hhhhhhHHHHHhhhhccCccceeecccCCCC-----ccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~ 407 (481)
..+.|+||.||++... +|..+|+|.+...... ..+.+.+|+.++.+++||||+++++++.... +||++
T Consensus 19 ~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 98 (361)
T 2yab_A 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVS 98 (361)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCC
Confidence 3478999999999854 6899999998764322 2356788999999999999999999987765 67899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC----cEEEccccCcccCC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM----VAHVSDFGISKLLG 480 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~----~~kl~Dfgl~~~~~ 480 (481)
+|+|.+++... ..+++..+..++.+|++||+||| +.+|+||||||+||++++++ .+||+|||+|+.+.
T Consensus 99 gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 99 GGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp SCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 99999998653 45788999999999999999999 57899999999999998876 79999999997653
No 180
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.83 E-value=8.2e-21 Score=184.41 Aligned_cols=133 Identities=26% Similarity=0.363 Sum_probs=113.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.|+||.||++... +|..+|+|.+.... ....+.+..|..++..+ +||||+++++++...+ +||+++|+
T Consensus 31 lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~ 110 (353)
T 3txo_A 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGD 110 (353)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred EeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCc
Confidence 478999999999854 58899999987542 22344567788899887 6999999999988765 67999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|.+++... ..+++..+..++.+|+.||+||| +.+||||||||+|||++.++++||+|||+|+.
T Consensus 111 L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 111 LMFHIQKS-RRFDEARARFYAAEIISALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99988753 35788889999999999999999 57899999999999999999999999999985
No 181
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.83 E-value=7e-21 Score=181.09 Aligned_cols=135 Identities=26% Similarity=0.510 Sum_probs=114.1
Q ss_pred hccccccceeeeec-----cCCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-------ccccc
Q 039957 341 SLAGSFGSVYKGTI-----SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~ 407 (481)
-+.|+||.||++.. .+|..||+|.+..... .....+.+|++++++++|+||+++++++...+ ++|++
T Consensus 29 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 108 (302)
T 4e5w_A 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108 (302)
T ss_dssp EEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCT
T ss_pred cCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCC
Confidence 37899999999973 4678999999875432 23456888999999999999999999987652 57899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh----cCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999998665566889999999999999999999 578999999999999999999999999999764
No 182
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.83 E-value=1.3e-20 Score=178.92 Aligned_cols=136 Identities=25% Similarity=0.450 Sum_probs=115.8
Q ss_pred hhccccccceeeeeccC-C---cceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC------cccccC
Q 039957 340 ISLAGSFGSVYKGTISD-G---TDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD------FKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~-g---~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~~~~ 408 (481)
..+.|+||.||+|...+ + ..+|+|.+.... ....+.+.+|+.++++++|+||+++++++...+ ++|+.+
T Consensus 28 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~ 107 (298)
T 3pls_A 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCH 107 (298)
T ss_dssp EEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTT
T ss_pred eeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccC
Confidence 34789999999998543 2 368999886533 234567889999999999999999999987553 468899
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.......++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 108 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 108 GDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA----EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp CBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred CCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999876667889999999999999999999 578999999999999999999999999999754
No 183
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.83 E-value=6.5e-21 Score=180.11 Aligned_cols=134 Identities=24% Similarity=0.442 Sum_probs=114.8
Q ss_pred hccccccceeeeeccCCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||++...+|..+|+|.+..... .....+.+|++++++++||||+++++++...+ +||++ |++.+
T Consensus 10 lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~ 88 (288)
T 1ob3_A 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKK 88 (288)
T ss_dssp EEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHH
T ss_pred cccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-CCHHH
Confidence 368999999999887789999999865432 22356778999999999999999999987765 56776 48888
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 89 LLDVCEGGLESVTAKSFLLQLLNGIAYCH----DRRVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp HHHTSTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 88765566888999999999999999999 578999999999999999999999999998653
No 184
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.83 E-value=4.6e-21 Score=196.70 Aligned_cols=136 Identities=29% Similarity=0.517 Sum_probs=118.1
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhHHh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEKRL 415 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~~l 415 (481)
..+.|+||.||+|....+..||||.+..... ..+.|.+|++++++++|+||++++++|.... +||+++|+|.+++
T Consensus 274 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l 352 (535)
T 2h8h_A 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 352 (535)
T ss_dssp EEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHH
T ss_pred ecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHH
Confidence 3478999999999987778899999875432 3457889999999999999999999987643 6799999999998
Q ss_pred hcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 416 YSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 416 ~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
... ...+++.++.+|+.+|++||+||| +.+||||||||+|||+++++.+||+|||+++.+.
T Consensus 353 ~~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 353 KGETGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred hhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 752 245788999999999999999999 5789999999999999999999999999998753
No 185
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.83 E-value=6.1e-21 Score=179.59 Aligned_cols=136 Identities=24% Similarity=0.400 Sum_probs=110.1
Q ss_pred hhccccccceeeeeccC----CcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTISD----GTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~----g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~ 410 (481)
..+.|+||.||+|.... +..+|+|...... ....+.+.+|+.++++++||||+++++++.... ++|+++|+
T Consensus 22 ~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~ 101 (281)
T 1mp8_A 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGE 101 (281)
T ss_dssp EEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTEE
T ss_pred EeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEecCCCCC
Confidence 34789999999998642 4568899876533 233456888999999999999999999986543 67899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 102 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 102 LRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp HHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHEEECCCCCEEECcccccccc
Confidence 99999876667899999999999999999999 578999999999999999999999999999764
No 186
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.83 E-value=5.1e-21 Score=185.48 Aligned_cols=135 Identities=29% Similarity=0.490 Sum_probs=115.6
Q ss_pred hccccccceeeeecc------CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS------DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||++... ++..||+|.+.... ....+.+.+|+.++++++|+||++++++|...+ ++|+++
T Consensus 55 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 134 (343)
T 1luf_A 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 134 (343)
T ss_dssp EEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred eeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCC
Confidence 378999999999864 34789999987543 233467889999999999999999999987764 678999
Q ss_pred CChhHHhhcCC-----------------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC
Q 039957 409 GSLEKRLYSHN-----------------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN 465 (481)
Q Consensus 409 g~l~~~l~~~~-----------------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~ 465 (481)
|+|.+++.... ..+++.++..++.+|++||+||| +.+|+||||||+||+++++
T Consensus 135 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS----ERKFVHRDLATRNCLVGEN 210 (343)
T ss_dssp CBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGG
T ss_pred CcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEECCC
Confidence 99999987531 45788999999999999999999 5789999999999999999
Q ss_pred CcEEEccccCcccC
Q 039957 466 MVAHVSDFGISKLL 479 (481)
Q Consensus 466 ~~~kl~Dfgl~~~~ 479 (481)
+.+||+|||+++.+
T Consensus 211 ~~~kl~Dfg~~~~~ 224 (343)
T 1luf_A 211 MVVKIADFGLSRNI 224 (343)
T ss_dssp GCEEECCCSCHHHH
T ss_pred CeEEEeecCCCccc
Confidence 99999999998643
No 187
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=181.02 Aligned_cols=137 Identities=31% Similarity=0.436 Sum_probs=115.8
Q ss_pred hhhccccccceeeeecc-CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-------cccccCC
Q 039957 339 TISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMPNG 409 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~~g 409 (481)
...+.|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++.... +||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence 34478999999999865 48899999987543 233456778999999999999999999876543 5789999
Q ss_pred ChhHHhhcCC--CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee----CCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL----DENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~--~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill----~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++.... ..+++..+..++.++++||+||| +.+|+||||||+||++ ++++.+||+|||+|+.+
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp BHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 9999987633 23789999999999999999999 5789999999999999 88899999999999765
No 188
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.83 E-value=1.9e-20 Score=178.52 Aligned_cols=134 Identities=36% Similarity=0.563 Sum_probs=115.4
Q ss_pred hccccccceeeeeccCCcceEEEEEeccc----hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQR----ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||+|.. ++..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+ ++|+++|+|
T Consensus 39 lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 117 (307)
T 2nru_A 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117 (307)
T ss_dssp EEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred cccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcH
Confidence 47899999999986 67889999886432 233456888999999999999999999987764 578999999
Q ss_pred hHHhhc--CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYS--HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~--~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++.. ....++|..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 183 (307)
T 2nru_A 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH----ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183 (307)
T ss_dssp HHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecCCCCHHHEEEcCCCcEEEeeccccccc
Confidence 998864 2345889999999999999999999 578999999999999999999999999998754
No 189
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.83 E-value=9e-21 Score=186.40 Aligned_cols=133 Identities=21% Similarity=0.281 Sum_probs=113.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.|+||.||++... ++..+|+|.+.... ......+..|..++.++ +|||||++++++...+ +||+++|+
T Consensus 60 LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~ 139 (396)
T 4dc2_A 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD 139 (396)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCc
Confidence 478999999999865 57889999987643 22334577888888886 8999999999988765 67999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|..++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+.
T Consensus 140 L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 140 LMFHMQRQ-RKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99988753 35788899999999999999999 57899999999999999999999999999985
No 190
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.83 E-value=8.5e-21 Score=181.38 Aligned_cols=134 Identities=22% Similarity=0.233 Sum_probs=111.0
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
-+.|+||.||+|... +|..||||++.... .........|+..+.++ +|+||++++++|.... +||+ +|++
T Consensus 65 LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L 143 (311)
T 3p1a_A 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSL 143 (311)
T ss_dssp EEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCH
Confidence 478999999999865 68999999876532 22233445566666555 8999999999997665 5677 7899
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++......++|..+..|+.++++||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 144 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 144 QQHCEAWGASLPEAQVWGYLRDTLLALAHLH----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9888766667899999999999999999999 578999999999999999999999999998765
No 191
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.83 E-value=1.2e-20 Score=182.97 Aligned_cols=134 Identities=27% Similarity=0.354 Sum_probs=115.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+..... ...+.+.+|+.++.+++||||+++++++.... +||+++|+|
T Consensus 49 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L 128 (350)
T 1rdq_E 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128 (350)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred eecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcH
Confidence 378999999999864 689999999865432 23456778999999999999999999987765 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..++...+..++.+|+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 129 ~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 129 FSHLRRI-GRFSEPHARFYAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp HHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCccceEEECCCCCEEEcccccceec
Confidence 9998753 34778889999999999999999 578999999999999999999999999999864
No 192
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.83 E-value=1.4e-20 Score=192.25 Aligned_cols=136 Identities=24% Similarity=0.323 Sum_probs=116.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+..... .....+.+|+.++.+++|+|||++++++...+ ++|+++|+|
T Consensus 192 LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L 271 (576)
T 2acx_A 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL 271 (576)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 478999999999864 689999999875432 23345778999999999999999999987765 679999999
Q ss_pred hHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 412 EKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 412 ~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
.+++.... ..+++..+..++.+|+.||+||| +.+||||||||+|||++.++++||+|||+|+.+.
T Consensus 272 ~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH----~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLH----RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp HHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99887643 34788999999999999999999 5789999999999999999999999999998653
No 193
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=179.24 Aligned_cols=133 Identities=26% Similarity=0.403 Sum_probs=109.4
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch--------------------------hhhhhhhHHHHHhhhhccCccce
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE--------------------------RAFRSFNSECEVLRNVRHQNLIK 393 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~--------------------------~~~~~~~~e~~~l~~l~h~niv~ 393 (481)
.+.|+||.||++.. .+|..||+|.+..... ...+.+.+|++++++++||||++
T Consensus 21 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 100 (298)
T 2zv2_A 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVK 100 (298)
T ss_dssp EEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCC
T ss_pred EeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCe
Confidence 47899999999985 4688999999865421 11346788999999999999999
Q ss_pred eecccCCCC-------cccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC
Q 039957 394 ILSSCSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM 466 (481)
Q Consensus 394 l~~~~~~~~-------~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~ 466 (481)
+++++.... +||+++|++.++... ..+++.++..++.++++||+||| +.+|+||||||+||+++.++
T Consensus 101 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~ 174 (298)
T 2zv2_A 101 LVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH----YQKIIHRDIKPSNLLVGEDG 174 (298)
T ss_dssp EEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTS
T ss_pred EEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEECCCC
Confidence 999987532 678999999876543 45788999999999999999999 57899999999999999999
Q ss_pred cEEEccccCcccC
Q 039957 467 VAHVSDFGISKLL 479 (481)
Q Consensus 467 ~~kl~Dfgl~~~~ 479 (481)
.+||+|||+++.+
T Consensus 175 ~~kl~Dfg~~~~~ 187 (298)
T 2zv2_A 175 HIKIADFGVSNEF 187 (298)
T ss_dssp CEEECCCTTCEEC
T ss_pred CEEEecCCCcccc
Confidence 9999999999764
No 194
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.83 E-value=1.1e-20 Score=182.68 Aligned_cols=134 Identities=25% Similarity=0.330 Sum_probs=114.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.|+||.||++... +|..||+|.+.... ......+..|..++.++ +||||+++++++...+ +||+++|+
T Consensus 25 lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~ 104 (345)
T 1xjd_A 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGD 104 (345)
T ss_dssp EEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCc
Confidence 478999999999864 58899999987543 22334567788888876 8999999999988765 67999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+..
T Consensus 105 L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 105 LMYHIQSC-HKFDLSRATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99998753 35788899999999999999999 578999999999999999999999999999853
No 195
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.83 E-value=6.2e-21 Score=186.59 Aligned_cols=134 Identities=27% Similarity=0.419 Sum_probs=112.5
Q ss_pred hccccccceeeeecc------CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS------DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||+|... ++..||||.+.... ......+.+|+.++.+++|+||+++++++.... +||+++
T Consensus 79 LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~ 158 (367)
T 3l9p_A 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158 (367)
T ss_dssp CCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred eeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCC
Confidence 478999999999843 45689999986432 334456888999999999999999999987764 678999
Q ss_pred CChhHHhhcCC------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC---cEEEccccCccc
Q 039957 409 GSLEKRLYSHN------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM---VAHVSDFGISKL 478 (481)
Q Consensus 409 g~l~~~l~~~~------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~---~~kl~Dfgl~~~ 478 (481)
|+|.+++.... ..+++.++..++.+|++||+||| +.+|+||||||+|||++.++ .+||+|||+|+.
T Consensus 159 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp EEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 99999987522 35789999999999999999999 57899999999999999554 599999999864
No 196
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.83 E-value=2.3e-20 Score=179.52 Aligned_cols=134 Identities=25% Similarity=0.373 Sum_probs=115.4
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchh------hhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||++... +|..+|+|.+...... ..+.+.+|+.++.+++||||+++++++.... +||+++
T Consensus 19 lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 98 (326)
T 2y0a_A 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98 (326)
T ss_dssp EECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCC
Confidence 478999999999864 6899999998754321 2356788999999999999999999987765 678999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC----cEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM----VAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~----~~kl~Dfgl~~~~ 479 (481)
|+|.+++... ..+++..+..++.++++||+||| +.+|+||||||+||++++++ .+||+|||+|+.+
T Consensus 99 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 99 GELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp CBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred CCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH----HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 9999998653 45788999999999999999999 57899999999999999887 8999999999765
No 197
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.83 E-value=1.4e-20 Score=180.01 Aligned_cols=135 Identities=29% Similarity=0.463 Sum_probs=115.0
Q ss_pred hccccccceeeeec------cCCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTI------SDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l------~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||++.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++...+ ++|+++
T Consensus 31 lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 110 (314)
T 2ivs_A 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110 (314)
T ss_dssp EEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCC
Confidence 47899999999975 235789999986543 334467888999999999999999999987764 678999
Q ss_pred CChhHHhhcCC-----------------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC
Q 039957 409 GSLEKRLYSHN-----------------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN 465 (481)
Q Consensus 409 g~l~~~l~~~~-----------------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~ 465 (481)
|+|.+++.... ..+++.++.+++.++++||+||| +.+|+||||||+||+++++
T Consensus 111 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 111 GSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA----EMKLVHRDLAARNILVAEG 186 (314)
T ss_dssp CBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETT
T ss_pred CCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH----HCCCcccccchheEEEcCC
Confidence 99999987532 24788899999999999999999 5789999999999999999
Q ss_pred CcEEEccccCcccC
Q 039957 466 MVAHVSDFGISKLL 479 (481)
Q Consensus 466 ~~~kl~Dfgl~~~~ 479 (481)
+.+||+|||+++..
T Consensus 187 ~~~kl~Dfg~~~~~ 200 (314)
T 2ivs_A 187 RKMKISDFGLSRDV 200 (314)
T ss_dssp TEEEECCCTTCEEC
T ss_pred CCEEEccccccccc
Confidence 99999999999754
No 198
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=5.5e-20 Score=166.35 Aligned_cols=154 Identities=18% Similarity=0.207 Sum_probs=132.6
Q ss_pred CEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh-hhhcccCccEEEccCCceeecCCcccccCC
Q 039957 113 SVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS-IGNFSTSLQRFSASECKLKGTIPKEIGHLR 191 (481)
Q Consensus 113 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~ 191 (481)
+.+++++|.++.++... .+.+++|+|++|++++..|.. |..+ ++|+.|++++|++++..|..|..++
T Consensus 14 ~~l~~s~n~l~~iP~~~-----------~~~~~~L~L~~N~l~~~~~~~~~~~l-~~L~~L~L~~N~i~~i~~~~~~~l~ 81 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHI-----------PQYTAELRLNNNEFTVLEATGIFKKL-PQLRKINFSNNKITDIEEGAFEGAS 81 (220)
T ss_dssp TEEECCSSCCSSCCSCC-----------CTTCSEEECCSSCCCEECCCCCGGGC-TTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CEeEeCCCCcccCccCC-----------CCCCCEEEcCCCcCCccCchhhhccC-CCCCEEECCCCcCCEECHHHhCCCC
Confidence 68999999999875422 235789999999999886644 5565 6899999999999988888999999
Q ss_pred CCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcC
Q 039957 192 GLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLG 271 (481)
Q Consensus 192 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 271 (481)
+|++|++++|++++..+..|..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+++
T Consensus 82 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 161 (220)
T 2v70_A 82 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLL 161 (220)
T ss_dssp TCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEec
Confidence 99999999999998888888899999999999999998888888888889999999998888888888888888888888
Q ss_pred CCcCccc
Q 039957 272 SNKLTSS 278 (481)
Q Consensus 272 ~N~l~~~ 278 (481)
+|.+...
T Consensus 162 ~N~l~c~ 168 (220)
T 2v70_A 162 ANPFNCN 168 (220)
T ss_dssp SCCEECS
T ss_pred CcCCcCC
Confidence 8888754
No 199
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.83 E-value=7.8e-21 Score=184.38 Aligned_cols=135 Identities=28% Similarity=0.388 Sum_probs=115.3
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||+|.. .+|..||+|.+.... ....+.+.+|+.++++++||||++++++|...+ +||++ |++
T Consensus 62 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l 140 (348)
T 1u5q_A 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA 140 (348)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred EccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCH
Confidence 37899999999985 578999999986543 233456889999999999999999999987664 56886 788
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
.+.+......+++..+..++.++++||+||| +.+|+||||||+|||+++++.+||+|||+|+...
T Consensus 141 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 141 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 8877655567889999999999999999999 5789999999999999999999999999998653
No 200
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.83 E-value=2.1e-20 Score=188.18 Aligned_cols=134 Identities=32% Similarity=0.525 Sum_probs=116.8
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||+|... +|..||+|.+..... .....+.+|+.+++.++||||+++++++...+ +||+++|+|
T Consensus 24 LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L 103 (476)
T 2y94_A 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103 (476)
T ss_dssp EECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEH
T ss_pred EeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 478999999999864 689999999875432 22356788999999999999999999987765 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++.++..++.+|++||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 104 ~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 104 FDYICKN-GRLDEKESRRLFQQILSGVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp HHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 9998753 45788999999999999999999 678999999999999999999999999999865
No 201
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.83 E-value=1.6e-20 Score=181.86 Aligned_cols=133 Identities=22% Similarity=0.282 Sum_probs=114.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.++|+||.||++... +|..+|+|.+.... ....+.+..|..++.++ +||||+++++++.... +||+++|+
T Consensus 17 lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~ 96 (345)
T 3a8x_A 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD 96 (345)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCc
Confidence 378999999999865 58899999987543 22345577899999887 8999999999987765 67999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|.+++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+.
T Consensus 97 L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 97 LMFHMQRQ-RKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence 99988653 35788899999999999999999 57899999999999999999999999999985
No 202
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.83 E-value=1.4e-20 Score=182.43 Aligned_cols=136 Identities=24% Similarity=0.446 Sum_probs=113.1
Q ss_pred hhccccccceeeeec------cCCcceEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccc
Q 039957 340 ISLAGSFGSVYKGTI------SDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l------~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~ 406 (481)
..+.|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++.++ +||||++++++|...+ ++|+
T Consensus 52 ~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 131 (344)
T 1rjb_A 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYC 131 (344)
T ss_dssp EEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecC
Confidence 347899999999985 235679999987543 23345788999999999 8999999999987764 6789
Q ss_pred cCCChhHHhhcCCC----------------------ccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC
Q 039957 407 PNGSLEKRLYSHNY----------------------FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE 464 (481)
Q Consensus 407 ~~g~l~~~l~~~~~----------------------~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~ 464 (481)
++|+|.+++..... .+++..+..++.++++||+||| +.+|+||||||+||+++.
T Consensus 132 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~ 207 (344)
T 1rjb_A 132 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE----FKSCVHRDLAARNVLVTH 207 (344)
T ss_dssp TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH----HTTEEETTCSGGGEEEET
T ss_pred CCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEEEcC
Confidence 99999999876432 3688999999999999999999 578999999999999999
Q ss_pred CCcEEEccccCcccC
Q 039957 465 NMVAHVSDFGISKLL 479 (481)
Q Consensus 465 ~~~~kl~Dfgl~~~~ 479 (481)
++.+||+|||+++.+
T Consensus 208 ~~~~kL~Dfg~~~~~ 222 (344)
T 1rjb_A 208 GKVVKICDFGLARDI 222 (344)
T ss_dssp TTEEEECCCGGGSCG
T ss_pred CCcEEeCCCccCccc
Confidence 999999999999754
No 203
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.83 E-value=7.4e-21 Score=195.71 Aligned_cols=130 Identities=19% Similarity=0.205 Sum_probs=100.9
Q ss_pred cccccceeeee-ccCCcceEEEEEeccc----------hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----ccc
Q 039957 343 AGSFGSVYKGT-ISDGTDVAIKIFNLQR----------ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKF 405 (481)
Q Consensus 343 ~g~~g~vy~~~-l~~g~~vavK~l~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~ 405 (481)
.|+.|....+. ...|..+++|.+.... ....++|.+|+++|+++ .|+||+++++++.+.. +||
T Consensus 244 ~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEy 323 (569)
T 4azs_A 244 AGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEK 323 (569)
T ss_dssp --------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEEC
T ss_pred cCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEec
Confidence 34444443332 2347889999986431 23346789999999998 6999999999998765 789
Q ss_pred ccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 406 MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 406 ~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
++||+|.+++...+ .++. .+|+.||++||+|+| +.+||||||||+|||+++++.+||+|||+|+...
T Consensus 324 v~G~~L~d~i~~~~-~l~~---~~I~~QIl~AL~ylH----~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 324 LPGRLLSDMLAAGE-EIDR---EKILGSLLRSLAALE----KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp CCSEEHHHHHHTTC-CCCH---HHHHHHHHHHHHHHH----HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred CCCCcHHHHHHhCC-CCCH---HHHHHHHHHHHHHHH----HCCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999997643 3443 358999999999999 6889999999999999999999999999998753
No 204
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.83 E-value=1.5e-20 Score=181.25 Aligned_cols=133 Identities=22% Similarity=0.293 Sum_probs=114.3
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
..+.|+||.||+|.. .+|..||+|.+.... ..+.+..|+.++.++ +|+||+++++++...+ ++|+ +|+|.
T Consensus 16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 92 (330)
T 2izr_A 16 KIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLE 92 (330)
T ss_dssp ECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHH
Confidence 347899999999984 578999999886543 234678899999999 9999999999887664 5688 99999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc-----EEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV-----AHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~-----~kl~Dfgl~~~~ 479 (481)
+++......+++..+..|+.++++||+||| +.+|+||||||+|||++.++. +||+|||+|+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 93 DLFDLCDRTFSLKTVLMIAIQLISRMEYVH----SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 998865567899999999999999999999 578999999999999999887 999999999864
No 205
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.82 E-value=1.4e-20 Score=176.81 Aligned_cols=134 Identities=25% Similarity=0.487 Sum_probs=115.9
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhHHhh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEKRLY 416 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~~l~ 416 (481)
.+.|+||.||+|...++..||+|.+.... ...+.+.+|++++.+++|+||+++++++.... ++|+++|+|.+++.
T Consensus 21 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~ 99 (279)
T 1qpc_A 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLK 99 (279)
T ss_dssp EEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTT
T ss_pred ecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCCCHHHHHh
Confidence 37899999999998778889999986543 23456888999999999999999999987654 57899999999986
Q ss_pred cCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 417 SHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 417 ~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
... ..+++.++.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 100 ~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 100 TPSGIKLTINKLLDMAAQIAEGMAFIE----ERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp SHHHHTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 532 25788999999999999999999 578999999999999999999999999999765
No 206
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.82 E-value=1.2e-20 Score=181.69 Aligned_cols=134 Identities=22% Similarity=0.354 Sum_probs=107.9
Q ss_pred hhccccccceeeeec----cCCcceEEEEEeccc----hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccc
Q 039957 340 ISLAGSFGSVYKGTI----SDGTDVAIKIFNLQR----ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l----~~g~~vavK~l~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~ 406 (481)
..+.|+||.||++.. .+|..+|+|.+.... ......+.+|+.++++++|+||+++++++...+ +||+
T Consensus 24 ~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 103 (327)
T 3a62_A 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYL 103 (327)
T ss_dssp EEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred EEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCC
Confidence 347899999999975 468899999987542 223445778999999999999999999987764 6789
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
++|+|.+++... ..++......++.+|+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 104 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 104 SGGELFMQLERE-GIFMEDTACFYLAEISMALGHLH----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp TTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH----hCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999988653 34677888899999999999999 57899999999999999999999999999875
No 207
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.82 E-value=2.8e-20 Score=179.65 Aligned_cols=135 Identities=25% Similarity=0.494 Sum_probs=113.8
Q ss_pred hccccccceeeeecc--------CCcceEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----ccc
Q 039957 341 SLAGSFGSVYKGTIS--------DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKF 405 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~--------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~ 405 (481)
.+.|+||.||++... ++..||+|.+.... ....+.+.+|++++.++ +||||++++++|...+ ++|
T Consensus 43 lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 122 (334)
T 2pvf_A 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 122 (334)
T ss_dssp EEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEEC
T ss_pred EeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEEC
Confidence 478999999999752 46789999986543 23445688899999999 8999999999997764 678
Q ss_pred ccCCChhHHhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 039957 406 MPNGSLEKRLYSHN---------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHV 470 (481)
Q Consensus 406 ~~~g~l~~~l~~~~---------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl 470 (481)
+++|+|.+++.... ..+++..+.+++.+|++||+||| +.+|+||||||+||+++.++.+||
T Consensus 123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL 198 (334)
T 2pvf_A 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENNVMKI 198 (334)
T ss_dssp CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEE
T ss_pred CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCccceEEEcCCCCEEE
Confidence 99999999987532 23788999999999999999999 578999999999999999999999
Q ss_pred ccccCcccC
Q 039957 471 SDFGISKLL 479 (481)
Q Consensus 471 ~Dfgl~~~~ 479 (481)
+|||+++..
T Consensus 199 ~Dfg~~~~~ 207 (334)
T 2pvf_A 199 ADFGLARDI 207 (334)
T ss_dssp CCCTTCEEC
T ss_pred ccccccccc
Confidence 999999754
No 208
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.82 E-value=2e-21 Score=187.93 Aligned_cols=133 Identities=22% Similarity=0.314 Sum_probs=105.1
Q ss_pred hccccccceeeeeccCCcceEEEEEeccch--------hhhhhhhHHHHHhhhhc---------c---------------
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------RAFRSFNSECEVLRNVR---------H--------------- 388 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~---------h--------------- 388 (481)
.++|+||.||+|.. +|..||+|.+..... ...+.+.+|+.+++.++ |
T Consensus 28 lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~ 106 (336)
T 2vuw_A 28 IGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGS 106 (336)
T ss_dssp EEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESS
T ss_pred ecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCC
Confidence 37899999999987 789999999876432 12356788999988886 4
Q ss_pred --CccceeecccCC-------------CC-----cccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 039957 389 --QNLIKILSSCST-------------PD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSA 448 (481)
Q Consensus 389 --~niv~l~~~~~~-------------~~-----~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~ 448 (481)
|||+++++++.. .. +||+++|++.+.+.. ..+++.....|+.||++||+|||+ +.
T Consensus 107 ~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~ 181 (336)
T 2vuw_A 107 YPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEA---SL 181 (336)
T ss_dssp CCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred CcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---hC
Confidence 555555544432 22 678999987776643 356888999999999999999993 25
Q ss_pred CeeeCCCCCCCeeeCCCC--------------------cEEEccccCcccC
Q 039957 449 PIIHCDLKPTSILLDENM--------------------VAHVSDFGISKLL 479 (481)
Q Consensus 449 ~i~H~dlk~~nill~~~~--------------------~~kl~Dfgl~~~~ 479 (481)
+||||||||+|||++.++ .+||+|||+|+..
T Consensus 182 ~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~ 232 (336)
T 2vuw_A 182 RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE 232 (336)
T ss_dssp CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence 699999999999999887 9999999999864
No 209
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.82 E-value=1.8e-20 Score=177.01 Aligned_cols=136 Identities=24% Similarity=0.432 Sum_probs=117.6
Q ss_pred hhccccccceeeeecc---CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCCh
Q 039957 340 ISLAGSFGSVYKGTIS---DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSL 411 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~---~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l 411 (481)
..+.|+||.||+|... .+..||+|.+.... ....+.+.+|++++.+++||||+++++++.... ++|+++|+|
T Consensus 17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L 96 (287)
T 1u59_A 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 96 (287)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCCH
Confidence 3478999999999753 56789999987643 334567889999999999999999999985543 678999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++......+++..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 97 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred HHHHHhCCccCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9998766667899999999999999999999 578999999999999999999999999999765
No 210
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.82 E-value=2e-20 Score=181.94 Aligned_cols=137 Identities=23% Similarity=0.405 Sum_probs=114.0
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccch-----hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-----RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
..+.|+||.||++.. .+|..||+|.+..... ...+.+.+|+.++.+++||||+++++++...+ +||+++
T Consensus 31 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 110 (351)
T 3c0i_A 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG 110 (351)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSS
T ss_pred EEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence 347899999999985 4689999999865431 12456889999999999999999999887664 679999
Q ss_pred CChhHHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc---EEEccccCcccCC
Q 039957 409 GSLEKRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV---AHVSDFGISKLLG 480 (481)
Q Consensus 409 g~l~~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~---~kl~Dfgl~~~~~ 480 (481)
|+|.+.+.. ....+++..+..++.+|++||+||| +.+|+||||||+|||++.++. +||+|||+++...
T Consensus 111 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 111 ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH----DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp CBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred CCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 999887754 2345788899999999999999999 578999999999999986554 9999999997653
No 211
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.82 E-value=2.2e-20 Score=179.05 Aligned_cols=134 Identities=25% Similarity=0.435 Sum_probs=108.8
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||+|... +|..||+|.+..... .....+.+|++++++++||||+++++++...+ +||++ |+|.+
T Consensus 13 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~ 91 (317)
T 2pmi_A 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKK 91 (317)
T ss_dssp ------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHH
T ss_pred ECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHH
Confidence 478999999999854 588999999876542 23356788999999999999999999998765 56887 69988
Q ss_pred HhhcC-----CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSH-----NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~-----~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++... ...+++..+..++.+|++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH----ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp HHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred HHHhccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 87642 234788889999999999999999 578999999999999999999999999999764
No 212
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.82 E-value=2.1e-20 Score=176.90 Aligned_cols=134 Identities=25% Similarity=0.388 Sum_probs=113.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..||+|.+..... .....+.+|+.++++++|+||+++++++.... +||++ |++.
T Consensus 10 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~ 88 (292)
T 3o0g_A 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLK 88 (292)
T ss_dssp EEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred ecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC-CCHH
Confidence 368999999999864 588999999875432 23356788999999999999999999987665 56776 4666
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.+......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 89 ~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH----~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 151 (292)
T 3o0g_A 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH----SRNVLHRDLKPQNLLINRNGELKLANFGLARAF 151 (292)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 666555566889999999999999999999 578999999999999999999999999999764
No 213
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.82 E-value=3.1e-20 Score=181.17 Aligned_cols=135 Identities=24% Similarity=0.463 Sum_probs=115.0
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+ +||+++|+|.
T Consensus 37 lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~ 116 (362)
T 2bdw_A 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 116 (362)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred EecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHH
Confidence 478999999999854 68999999987543 233456888999999999999999999988765 6789999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC---CcEEEccccCcccCC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN---MVAHVSDFGISKLLG 480 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~---~~~kl~Dfgl~~~~~ 480 (481)
+++... ..+++..+..++.+|++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 117 ~~l~~~-~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 117 EDIVAR-EFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp HHHTTC-SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred HHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 988754 45788999999999999999999 5789999999999999865 469999999997653
No 214
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.82 E-value=2e-20 Score=180.53 Aligned_cols=137 Identities=31% Similarity=0.531 Sum_probs=114.4
Q ss_pred hhhccccccceeeeeccC-----CcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----ccccc
Q 039957 339 TISLAGSFGSVYKGTISD-----GTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~~-----g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~ 407 (481)
...++|+||.||+|.... +..||+|.+.... ......+.+|+.++++++|+||+++++++...+ +||++
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 129 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME 129 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence 345789999999998642 2359999987543 233456888999999999999999999987764 67899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++......+++.++.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 130 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 130 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA----NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999876667899999999999999999999 578999999999999999999999999999764
No 215
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.82 E-value=1.6e-20 Score=179.43 Aligned_cols=135 Identities=27% Similarity=0.430 Sum_probs=115.7
Q ss_pred hccccccceeeeec------cCCcceEEEEEeccch-hhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----ccccc
Q 039957 341 SLAGSFGSVYKGTI------SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l------~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~ 407 (481)
.+.|+||.||++.. .++..||+|.+..... ...+.+.+|+.++.++ +||||++++++|...+ +||++
T Consensus 31 lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~ 110 (313)
T 1t46_A 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 110 (313)
T ss_dssp EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred hCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCC
Confidence 47899999999974 3467899999875433 3346688999999999 9999999999987765 67899
Q ss_pred CCChhHHhhcCCC-----------------ccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 039957 408 NGSLEKRLYSHNY-----------------FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHV 470 (481)
Q Consensus 408 ~g~l~~~l~~~~~-----------------~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl 470 (481)
+|+|.+++..... .+++.++.+++.++++||+||| +.+|+||||||+||++++++.+||
T Consensus 111 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl 186 (313)
T 1t46_A 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGRITKI 186 (313)
T ss_dssp TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEETTTEEEE
T ss_pred CCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEcCCCCEEE
Confidence 9999999875432 4789999999999999999999 578999999999999999999999
Q ss_pred ccccCcccC
Q 039957 471 SDFGISKLL 479 (481)
Q Consensus 471 ~Dfgl~~~~ 479 (481)
+|||+++..
T Consensus 187 ~Dfg~~~~~ 195 (313)
T 1t46_A 187 CDFGLARDI 195 (313)
T ss_dssp CCCGGGSCT
T ss_pred ccccccccc
Confidence 999999865
No 216
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=180.68 Aligned_cols=135 Identities=28% Similarity=0.480 Sum_probs=111.6
Q ss_pred hccccccceeeeec-cCCcce----EEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTDV----AIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~v----avK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~ 410 (481)
.+.|+||.||+|.. .++..+ ++|.+.... ....+.+.+|+.++++++||||++++++|.... ++|+++|+
T Consensus 23 lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~~~~~g~ 102 (327)
T 3lzb_A 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGC 102 (327)
T ss_dssp EEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEECCCSSCB
T ss_pred eeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEEecCCCc
Confidence 47899999999984 455554 666654332 234457888999999999999999999988765 56889999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.+++......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 103 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 99999876667889999999999999999999 578999999999999999999999999999865
No 217
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.2e-19 Score=165.21 Aligned_cols=155 Identities=22% Similarity=0.246 Sum_probs=122.2
Q ss_pred ccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCC
Q 039957 169 LQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGG 248 (481)
Q Consensus 169 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 248 (481)
.+.++.+++.++ .+|..+. ++|++|++++|.+++..|..|..+++|+.|++++|+++...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 445666666665 4554443 6777777777777777777777778888888888888776667778888888888888
Q ss_pred CeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeec
Q 039957 249 NKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDI 327 (481)
Q Consensus 249 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 327 (481)
|++++..+..|..+++|++|++++|+++ .+|..+..++.|+.|++++|++++..+..+..+++|+.|++++|++.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 8888777777888888888888888887 67888888888888999999888777777888999999999999988653
No 218
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.82 E-value=2.8e-20 Score=174.78 Aligned_cols=135 Identities=24% Similarity=0.424 Sum_probs=117.6
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.++|+||.||++.. .+|..||+|.+..... ...+.+.+|+.++.+++||||+++++++...+ +||+++|+|
T Consensus 19 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (278)
T 3cok_A 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM 98 (278)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEH
T ss_pred ecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcH
Confidence 36899999999985 5689999999865432 22356788999999999999999999988765 578999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++......+++..+..++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 99 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 99 NRYLKNRVKPFSENEARHFMHQIITGMLYLH----SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp HHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 9998876667889999999999999999999 578999999999999999999999999998764
No 219
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=7.4e-20 Score=166.63 Aligned_cols=153 Identities=25% Similarity=0.241 Sum_probs=88.7
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
-+.++.++++++.+ |..+. ++|++|+|++|++++..|..+. .+++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 21 ~~~v~c~~~~l~~i-p~~~~--~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHASV-PAGIP--TNAQILYLHDNQITKLEPGVFD-SLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcCcc-CCCCC--CCCCEEEcCCCccCccCHHHhh-CccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 34566666666533 33222 5566666666666644444443 56666666666666655444555666666666666
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEc
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSA 174 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l 174 (481)
+|++++..+..|..+++|++|+|++|+++.++ ..+..+++|++|+|++|++++..+..+..+ ++|+.|++
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp---------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l 166 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLTELP---------RGIERLTHLTHLALDQNQLKSIPHGAFDRL-SSLTHAYL 166 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCSCC---------TTGGGCTTCSEEECCSSCCCCCCTTTTTTC-TTCCEEEC
T ss_pred CCcCCccChhHhCcchhhCeEeccCCcccccC---------cccccCCCCCEEECCCCcCCccCHHHHhCC-CCCCEEEe
Confidence 66666655555666666666666666666442 223455666666666666665444444444 45666666
Q ss_pred cCCceee
Q 039957 175 SECKLKG 181 (481)
Q Consensus 175 ~~n~l~~ 181 (481)
++|.+..
T Consensus 167 ~~N~~~c 173 (229)
T 3e6j_A 167 FGNPWDC 173 (229)
T ss_dssp TTSCBCT
T ss_pred eCCCccC
Confidence 6666553
No 220
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.82 E-value=7.4e-21 Score=198.55 Aligned_cols=134 Identities=25% Similarity=0.419 Sum_probs=115.6
Q ss_pred hccccccceeeeecc---CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS---DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~---~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l 411 (481)
.+.|+||.||+|... .+..||||++..... ...+.+.+|++++.+++|+|||+++++|.... +||+++|+|
T Consensus 377 LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~L 456 (635)
T 4fl3_A 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPL 456 (635)
T ss_dssp EEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred eccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCCCH
Confidence 478999999999653 357899999875432 23467889999999999999999999997654 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..|+.+|++||+||| +.+||||||||+|||+++++.+||+|||+|+.+
T Consensus 457 ~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH----~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 457 NKYLQQN-RHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp HHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred HHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH----HCCEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9998753 45788999999999999999999 578999999999999999999999999999765
No 221
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.82 E-value=1.2e-20 Score=181.42 Aligned_cols=136 Identities=26% Similarity=0.485 Sum_probs=107.5
Q ss_pred hhccccccceeeeeccCC----cceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------
Q 039957 340 ISLAGSFGSVYKGTISDG----TDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------- 402 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g----~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------- 402 (481)
..+.|+||.||+|..... ..||+|.+.... ....+.+.+|++++++++|+||+++++++....
T Consensus 30 ~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v 109 (323)
T 3qup_A 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVI 109 (323)
T ss_dssp EEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEE
T ss_pred eecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEE
Confidence 347899999999986543 279999886542 334567889999999999999999999886542
Q ss_pred cccccCCChhHHhhcC-----CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 403 FKFMPNGSLEKRLYSH-----NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 403 ~~~~~~g~l~~~l~~~-----~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
++|+++|+|.+++... ...+++..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~ 185 (323)
T 3qup_A 110 LPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS----SRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185 (323)
T ss_dssp EECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred EEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH----cCCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence 4688999999988642 225788999999999999999999 5789999999999999999999999999997
Q ss_pred cC
Q 039957 478 LL 479 (481)
Q Consensus 478 ~~ 479 (481)
..
T Consensus 186 ~~ 187 (323)
T 3qup_A 186 KI 187 (323)
T ss_dssp --
T ss_pred cc
Confidence 64
No 222
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.82 E-value=3.2e-20 Score=179.15 Aligned_cols=134 Identities=25% Similarity=0.359 Sum_probs=114.3
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch--------hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE--------RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~ 406 (481)
.+.|+||.||++.. .+|..||+|.+..... .....+.+|+.++++++|+||+++++++...+ ++|+
T Consensus 32 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~ 111 (335)
T 3dls_A 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKH 111 (335)
T ss_dssp CSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeC
Confidence 37899999999984 5688999999876431 13346788999999999999999999998765 5677
Q ss_pred cCC-ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNG-SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g-~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
..| ++.+++... ..+++..+..|+.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 112 ~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 112 GSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLR----LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp TTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 666 999888653 35788999999999999999999 578999999999999999999999999999765
No 223
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=7.1e-21 Score=177.12 Aligned_cols=171 Identities=22% Similarity=0.268 Sum_probs=117.7
Q ss_pred CCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCce
Q 039957 11 NLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLII 90 (481)
Q Consensus 11 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 90 (481)
.+.+++.++++.|.++++. .+..+++|++|++++|.++ .+| .+. .+++|++|+|++|++++..+ +..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~-~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQ-FFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGG-GCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHh-hCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 4556677778888877553 4677788888888888886 566 343 57788888888888775544 777788888
Q ss_pred eecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCcc
Q 039957 91 LDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQ 170 (481)
Q Consensus 91 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 170 (481)
|++++|++++. |. +.. ++|++|++++|+++++ +.+..+++|++|+|++|++++. + .+..+ ++|+
T Consensus 90 L~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~----------~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l-~~L~ 153 (263)
T 1xeu_A 90 LSVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT----------DSLIHLKNLEILSIRNNKLKSI-V-MLGFL-SKLE 153 (263)
T ss_dssp EECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS----------GGGTTCTTCCEEECTTSCCCBC-G-GGGGC-TTCC
T ss_pred EECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC----------hhhcCcccccEEECCCCcCCCC-h-HHccC-CCCC
Confidence 88888887753 33 222 7778888888777765 2245677777777777777754 2 45554 4677
Q ss_pred EEEccCCceeecCCcccccCCCCCeEecccccceec
Q 039957 171 RFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGT 206 (481)
Q Consensus 171 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 206 (481)
.|++++|++++. ..+..+++|++|++++|.+++.
T Consensus 154 ~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 154 VLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp EEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred EEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 777777777654 4566677777777777776643
No 224
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.82 E-value=2.2e-20 Score=177.45 Aligned_cols=134 Identities=30% Similarity=0.458 Sum_probs=108.4
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhh--hccCccceeecccCCC---------CcccccC
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRN--VRHQNLIKILSSCSTP---------DFKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~---------~~~~~~~ 408 (481)
..+.|+||.||+|.. +|..||||.+.... ...+..|.+++.. ++||||+++++++... .+||+++
T Consensus 15 ~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 90 (301)
T 3q4u_A 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90 (301)
T ss_dssp EEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTT
T ss_pred eeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccC
Confidence 347899999999987 68899999986543 2334456665555 7999999999886432 1578999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC----CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.. ..+++..+.+++.++++||+|||... .+.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 91 g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 91 GSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp CBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 999999864 35889999999999999999999321 0368999999999999999999999999998653
No 225
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.82 E-value=4.8e-20 Score=184.23 Aligned_cols=135 Identities=20% Similarity=0.376 Sum_probs=113.7
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++.. .+|..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+ +||+++|+|.
T Consensus 19 LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~ 98 (444)
T 3soa_A 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 98 (444)
T ss_dssp EEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHH
T ss_pred eccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHH
Confidence 47899999999974 568999999987643 233456789999999999999999999988765 6789999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC---CCCcEEEccccCcccCC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD---ENMVAHVSDFGISKLLG 480 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~---~~~~~kl~Dfgl~~~~~ 480 (481)
+.+... ..++......++.+|++||+||| +.+|+||||||+|||++ +++.+||+|||+|+...
T Consensus 99 ~~i~~~-~~~~e~~~~~i~~qil~aL~~lH----~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 99 EDIVAR-EYYSEADASHCIQQILEAVLHCH----QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp HHHHHC-SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred HHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 988764 35788899999999999999999 57899999999999998 46889999999997653
No 226
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.82 E-value=9.7e-21 Score=190.24 Aligned_cols=135 Identities=26% Similarity=0.308 Sum_probs=107.5
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++.. .+|..||+|.+.... ......+..|+.++++++|+||++++++|...+ +||+++|+|
T Consensus 156 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L 235 (446)
T 4ejn_A 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL 235 (446)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBH
T ss_pred EeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcH
Confidence 47899999999985 468999999987542 223345678999999999999999999987664 689999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..++.+|++||+|||. ..+||||||||+|||++.++.+||+|||+|+..
T Consensus 236 ~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 236 FFHLSRE-RVFSEDRARFYGAEIVSALDYLHS---EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp HHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh---cCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9988653 357888999999999999999993 167999999999999999999999999999863
No 227
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.82 E-value=2.2e-20 Score=175.73 Aligned_cols=136 Identities=24% Similarity=0.434 Sum_probs=116.0
Q ss_pred hhccccccceeeeeccC----CcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTISD----GTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~----g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~ 410 (481)
..+.|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++||||+++++++.... ++|+++|+
T Consensus 19 ~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~ 98 (281)
T 3cc6_A 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE 98 (281)
T ss_dssp EEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEEECCTTCB
T ss_pred EEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEEecCCCCC
Confidence 34789999999997542 2459999887543 234567889999999999999999999987654 57899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 99 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 99 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 99998765566889999999999999999999 578999999999999999999999999998764
No 228
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.82 E-value=1.9e-20 Score=180.50 Aligned_cols=134 Identities=28% Similarity=0.443 Sum_probs=114.2
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..+.|+||.||+|.. .+|..||+|.+..... .....+.+|+.+++.++||||+++++++.... +||+ +|+
T Consensus 16 ~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~ 94 (336)
T 3h4j_B 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGE 94 (336)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEE
T ss_pred EEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCc
Confidence 347899999999985 5689999999865422 22346788999999999999999999998765 5788 689
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.+++... ..+++.++.+++.++++|++||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 95 l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 95 LFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH----RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp HHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 98887653 35788999999999999999999 578999999999999999999999999999865
No 229
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.82 E-value=2e-20 Score=176.78 Aligned_cols=134 Identities=31% Similarity=0.550 Sum_probs=109.9
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l~~ 413 (481)
..++|+||.||++... ..+|+|.+.... ....+.+.+|+.++++++|+||+++++++.... ++|+++|+|.+
T Consensus 31 ~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (289)
T 3og7_A 31 RIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYH 108 (289)
T ss_dssp EEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHH
T ss_pred EecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecCCCcHHH
Confidence 3478999999999753 359999986543 234467889999999999999999999876554 67899999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++......+++.++.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 109 ~l~~~~~~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 109 HLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp HHTTC---CCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred HHhhccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCCEEEccceecccc
Confidence 99776677899999999999999999999 578999999999999999999999999998754
No 230
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.82 E-value=5e-20 Score=175.67 Aligned_cols=135 Identities=27% Similarity=0.445 Sum_probs=111.2
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC---cccccCCChhHHhhc
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD---FKFMPNGSLEKRLYS 417 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---~~~~~~g~l~~~l~~ 417 (481)
.+.|+||.||++... +..||+|.+... ...+.+.+|+.++++++||||++++++|.... +||+++|+|.+++..
T Consensus 16 lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 92 (307)
T 2eva_A 16 VGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHG 92 (307)
T ss_dssp EECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHHHHHHC
T ss_pred eecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhc
Confidence 478999999999864 788999988643 23456888999999999999999999987653 679999999999876
Q ss_pred CCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc-EEEccccCcccC
Q 039957 418 HNY--FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV-AHVSDFGISKLL 479 (481)
Q Consensus 418 ~~~--~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~-~kl~Dfgl~~~~ 479 (481)
... ..++...++++.++++||+|||+.+ ..+|+||||||+||+++.++. +||+|||+++..
T Consensus 93 ~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~ 156 (307)
T 2eva_A 93 AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ-PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156 (307)
T ss_dssp SSSEECCCHHHHHHHHHHHHHHHHHHHTCS-SSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHHhCC-CCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence 432 4678889999999999999999533 278999999999999998876 899999998754
No 231
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.82 E-value=3.6e-20 Score=186.79 Aligned_cols=134 Identities=24% Similarity=0.396 Sum_probs=104.7
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----------cccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~~~ 406 (481)
..+.|+||.||++... +|..||+|++.... ....+.+.+|+.++++++|+|||+++++|.... +||+
T Consensus 60 ~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 139 (458)
T 3rp9_A 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139 (458)
T ss_dssp C-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC
T ss_pred EeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc
Confidence 4478999999999754 68999999986532 233456889999999999999999999885432 3455
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++... ..+++..+..++.+|++||+||| +.+||||||||+|||++.++.+||+|||+|+..
T Consensus 140 -~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH----~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 140 -DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp -SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred -ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH----hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 57888887643 45788899999999999999999 578999999999999999999999999999875
No 232
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.82 E-value=2.6e-20 Score=184.10 Aligned_cols=138 Identities=30% Similarity=0.428 Sum_probs=116.0
Q ss_pred hhhccccccceeeeecc-CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-------cccccCC
Q 039957 339 TISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMPNG 409 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~~g 409 (481)
..-+.|+||.||+|... +|..||+|.+..... ...+.+.+|++++++++|+||+++++++...+ +||+++|
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g 94 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence 34478999999999865 589999999875432 33456778999999999999999999886543 5789999
Q ss_pred ChhHHhhcCC--CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee----CCCCcEEEccccCcccCC
Q 039957 410 SLEKRLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL----DENMVAHVSDFGISKLLG 480 (481)
Q Consensus 410 ~l~~~l~~~~--~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill----~~~~~~kl~Dfgl~~~~~ 480 (481)
+|.+++.... ..+++..+..++.+|++||+||| +.+|+||||||+||++ ++++.+||+|||+|+.+.
T Consensus 95 ~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp EHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999987532 23789999999999999999999 5789999999999999 788899999999998653
No 233
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.82 E-value=2.1e-20 Score=181.46 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=113.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.|+||.||++... +|..||+|.+.... ....+.+..|..++..+ +|++|+++.+++...+ +||+++|+
T Consensus 28 lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~ 107 (353)
T 2i0e_A 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD 107 (353)
T ss_dssp EEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred EeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCc
Confidence 378999999999865 47889999987643 22344567788888887 7999999999887765 67999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|.+++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+.
T Consensus 108 L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 108 LMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99998753 34788899999999999999999 57899999999999999999999999999985
No 234
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.82 E-value=3.1e-20 Score=177.89 Aligned_cols=135 Identities=24% Similarity=0.312 Sum_probs=114.9
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC---------CcccccCCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP---------DFKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------~~~~~~~g~ 410 (481)
.+.|+||.||++.. .+|..||+|.+........+.+.+|+.++++++|+||+++++++... .++|+++|+
T Consensus 37 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~ 116 (317)
T 2buj_A 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGT 116 (317)
T ss_dssp EEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCB
T ss_pred ecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCc
Confidence 47899999999985 57899999998765555566788999999999999999999988521 157899999
Q ss_pred hhHHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++.. ....+++.++.+++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 117 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 117 LWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9998865 3456889999999999999999999 578999999999999999999999999987653
No 235
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.82 E-value=3.7e-20 Score=184.27 Aligned_cols=136 Identities=28% Similarity=0.405 Sum_probs=112.9
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccch--------hhhhhhhHHHHHhhhhccCccceeecccCCCC----cccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--------RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~ 406 (481)
.-++|+||.||+|... ++..||+|.+..... .....+.+|+.++++++||||+++++++.... +||+
T Consensus 142 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~lv~e~~ 221 (419)
T 3i6u_A 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELM 221 (419)
T ss_dssp EEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSEEEEEEECC
T ss_pred EEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCceEEEEEcC
Confidence 3478999999999754 578999999875421 12235788999999999999999999986554 6799
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC---CcEEEccccCcccCC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN---MVAHVSDFGISKLLG 480 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~---~~~kl~Dfgl~~~~~ 480 (481)
++|+|.+++... ..+++.....++.++++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 222 ~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~ 293 (419)
T 3i6u_A 222 EGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293 (419)
T ss_dssp TTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC
T ss_pred CCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCCCcceEEEeecccceecC
Confidence 999999987643 45788999999999999999999 5789999999999999754 469999999998753
No 236
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.82 E-value=4.7e-20 Score=187.85 Aligned_cols=135 Identities=26% Similarity=0.374 Sum_probs=116.4
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+..... .....+..|+.++.+++||||+++++++.... ++|+++|+|
T Consensus 193 LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L 272 (543)
T 3c4z_A 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI 272 (543)
T ss_dssp EEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred EeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCH
Confidence 378999999999864 689999999875432 23356788999999999999999999887765 679999999
Q ss_pred hHHhhcC---CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSH---NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~---~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ...+++..+..++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+.+
T Consensus 273 ~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH----~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 273 RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH----QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp HHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH----HcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9988753 345788899999999999999999 578999999999999999999999999999765
No 237
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.81 E-value=4e-20 Score=182.43 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=115.6
Q ss_pred hccc--cccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAG--SFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g--~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.| +||.||++... +|..||+|.+.... ....+.+.+|+.++++++|+|||++++++...+ ++|+++|+
T Consensus 33 lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 112 (389)
T 3gni_B 33 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 112 (389)
T ss_dssp EEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCC
Confidence 3678 99999999865 68999999997653 233456788999999999999999999987765 67899999
Q ss_pred hhHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|.+++... ...+++..+..++.+|++||+||| +.+|+||||||+|||++.++.+||+|||.+..
T Consensus 113 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 113 AKDLICTHFMDGMNELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp HHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred HHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99998753 345788999999999999999999 57899999999999999999999999998753
No 238
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.81 E-value=2.8e-20 Score=174.66 Aligned_cols=135 Identities=23% Similarity=0.346 Sum_probs=116.7
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
..+.|+||.||++... ++..+|+|.+........+.+.+|++++++++|+||++++++|.... ++|+++|+|.+
T Consensus 16 ~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (277)
T 3f3z_A 16 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE 95 (277)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred EEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHH
Confidence 3478999999999865 46789999987655555667889999999999999999999998765 67899999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
++... ..+++..+.+++.++++|++||| +.+|+||||||+||++ +.++.+||+|||+++.+
T Consensus 96 ~~~~~-~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 96 RVVHK-RVFRESDAARIMKDVLSAVAYCH----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp HHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 87653 34788899999999999999999 5789999999999999 78899999999998754
No 239
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.81 E-value=7.5e-21 Score=181.78 Aligned_cols=138 Identities=20% Similarity=0.348 Sum_probs=114.3
Q ss_pred hhhhhccccccceeeeec-cCCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCC---------Cc
Q 039957 337 LETISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTP---------DF 403 (481)
Q Consensus 337 L~~l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------~~ 403 (481)
+....+.|+||.||++.. .+|..||+|.+..... .....+.+|+.++.+++||||+++++++... .+
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEE
Confidence 334457899999999985 5789999999876432 2345678899999999999999999887543 25
Q ss_pred ccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 404 KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 404 ~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
||+++|+|.+++... ..+++.++.+++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 96 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH----QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp ECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 789999999998753 35788999999999999999999 578999999999999999999999999999754
No 240
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.81 E-value=4e-20 Score=179.53 Aligned_cols=133 Identities=24% Similarity=0.399 Sum_probs=105.2
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
..+.|+||.||++... ++..||+|.+.... ..+.+.+|++++.+++|+||++++++|...+ +||+++|+|.+
T Consensus 60 ~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 137 (349)
T 2w4o_A 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD 137 (349)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred EEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHH
Confidence 3478999999999865 57889999987543 2345778999999999999999999998765 67999999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~~ 479 (481)
++... ..+++.++..++.++++||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 138 ~l~~~-~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 138 RIVEK-GYYSERDAADAVKQILEAVAYLH----ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp HHTTC-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 88754 35788999999999999999999 578999999999999975 899999999998864
No 241
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.81 E-value=6e-20 Score=176.07 Aligned_cols=133 Identities=27% Similarity=0.494 Sum_probs=113.5
Q ss_pred hccccccceeeeec-----cCCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-------ccccc
Q 039957 341 SLAGSFGSVYKGTI-----SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~ 407 (481)
.+.|+||.||++.. .+|..||+|.+..... ...+.+.+|++++++++|+||+++++++...+ ++|++
T Consensus 39 lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 118 (318)
T 3lxp_A 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118 (318)
T ss_dssp EEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCT
T ss_pred ecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEeccc
Confidence 47899999977643 2578899999876532 33456889999999999999999999987632 67899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++.... +++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 119 ~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 119 LGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH----AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp TCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred CCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999987543 788999999999999999999 578999999999999999999999999999765
No 242
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.81 E-value=6.9e-21 Score=187.10 Aligned_cols=135 Identities=19% Similarity=0.181 Sum_probs=106.9
Q ss_pred hhccccccceeeeec-cCCcceEEEEEecc---chhhhhhhhHHH---HHhhhhccCccceeecccCC-------C----
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQ---RERAFRSFNSEC---EVLRNVRHQNLIKILSSCST-------P---- 401 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~-------~---- 401 (481)
..+.|+||.||+|.. .+|..||||.+... .....+.+.+|+ +.+++++|||||++++.+.. .
T Consensus 80 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~ 159 (377)
T 3byv_A 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKK 159 (377)
T ss_dssp EEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCS
T ss_pred eeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCcc
Confidence 347899999999986 46899999998743 233446678898 56666789999998854431 1
Q ss_pred ------------------CcccccCCChhHHhhcCC------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCC
Q 039957 402 ------------------DFKFMPNGSLEKRLYSHN------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457 (481)
Q Consensus 402 ------------------~~~~~~~g~l~~~l~~~~------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~ 457 (481)
.+||+ +|+|.+++.... ..+++..+.+|+.+|++||+||| +.+|+||||||
T Consensus 160 ~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDikp 234 (377)
T 3byv_A 160 MIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYLRP 234 (377)
T ss_dssp EEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCCCG
T ss_pred ccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCCCH
Confidence 13456 689999887522 23446888899999999999999 57899999999
Q ss_pred CCeeeCCCCcEEEccccCcccC
Q 039957 458 TSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 458 ~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|||++.++.+||+|||+|+..
T Consensus 235 ~NIll~~~~~~kL~DFG~a~~~ 256 (377)
T 3byv_A 235 VDIVLDQRGGVFLTGFEHLVRD 256 (377)
T ss_dssp GGEEECTTCCEEECCGGGCEET
T ss_pred HHEEEcCCCCEEEEechhheec
Confidence 9999999999999999999754
No 243
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=8.5e-20 Score=162.22 Aligned_cols=153 Identities=14% Similarity=0.113 Sum_probs=85.3
Q ss_pred cCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCC
Q 039957 34 FNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLS 113 (481)
Q Consensus 34 ~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 113 (481)
..+++|++|++++|.++ .+| .+. .+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|+.+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~-~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIE-YAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGG-GCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHh-cCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 44555666666666665 445 232 4566666666666443 123455566666666666666655555566666666
Q ss_pred EEEcccccCccccCCCccccccccCCCCCCCcEEEccCCc-cceeCChhhhhcccCccEEEccCCceeecCCcccccCCC
Q 039957 114 VLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNP-LGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRG 192 (481)
Q Consensus 114 ~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~ 192 (481)
+|++++|+++... +..+..+++|++|++++|. ++ .+| .+..+ ++|++|++++|.+++ ++ .+..+++
T Consensus 116 ~L~Ls~n~i~~~~--------~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l-~~L~~L~l~~n~i~~-~~-~l~~l~~ 182 (197)
T 4ezg_A 116 LLDISHSAHDDSI--------LTKINTLPKVNSIDLSYNGAIT-DIM-PLKTL-PELKSLNIQFDGVHD-YR-GIEDFPK 182 (197)
T ss_dssp EEECCSSBCBGGG--------HHHHTTCSSCCEEECCSCTBCC-CCG-GGGGC-SSCCEEECTTBCCCC-CT-TGGGCSS
T ss_pred EEEecCCccCcHh--------HHHHhhCCCCCEEEccCCCCcc-ccH-hhcCC-CCCCEEECCCCCCcC-hH-HhccCCC
Confidence 6666666655421 1223455566666666665 33 233 34444 456666666666664 33 5667777
Q ss_pred CCeEecccccce
Q 039957 193 LIYLSLGFNDLN 204 (481)
Q Consensus 193 L~~L~l~~N~l~ 204 (481)
|++|++++|++.
T Consensus 183 L~~L~l~~N~i~ 194 (197)
T 4ezg_A 183 LNQLYAFSQTIG 194 (197)
T ss_dssp CCEEEECBC---
T ss_pred CCEEEeeCcccC
Confidence 777777777765
No 244
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.81 E-value=5.1e-20 Score=176.08 Aligned_cols=135 Identities=30% Similarity=0.556 Sum_probs=108.4
Q ss_pred hccccccceeeeeccC----CcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----------cc
Q 039957 341 SLAGSFGSVYKGTISD----GTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------FK 404 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~----g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~ 404 (481)
.+.|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++||||+++++++.... ++
T Consensus 42 lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e 121 (313)
T 3brb_A 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121 (313)
T ss_dssp EEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEE
T ss_pred eeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEe
Confidence 4789999999997542 3579999886542 333456889999999999999999999886542 46
Q ss_pred cccCCChhHHhhc-----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 405 FMPNGSLEKRLYS-----HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 405 ~~~~g~l~~~l~~-----~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+++|+|.+++.. ....+++..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 122 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~ 197 (313)
T 3brb_A 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS----NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197 (313)
T ss_dssp CCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred cccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEEeecCcceec
Confidence 8899999998843 2346889999999999999999999 678999999999999999999999999999764
No 245
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.81 E-value=7.5e-20 Score=175.86 Aligned_cols=132 Identities=23% Similarity=0.327 Sum_probs=112.0
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhc-cCccceeecccCCCC-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-HQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
..+.|+||.||++... +|..||+|.+... ....+.+|+.++.+++ ||||+++++++.... +||+++|+|.
T Consensus 18 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 3478999999999864 5889999998643 2345677999999997 999999999998765 6789999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC---cEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM---VAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~---~~kl~Dfgl~~~~ 479 (481)
+++... ..+++.++..|+.++++||+||| +.+|+||||||+||+++.++ .+||+|||+|+..
T Consensus 95 ~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 95 ERIKKK-KHFSETEASYIMRKLVSAVSHMH----DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp HHHHHC-SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred HHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 998764 45788999999999999999999 57899999999999997655 8999999999754
No 246
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.81 E-value=3.1e-20 Score=178.54 Aligned_cols=134 Identities=24% Similarity=0.435 Sum_probs=112.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchh-hhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER-AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
-+.|+||.||++... +|..||+|.+...... ....+.+|+.++++++|+||+++++++...+ +||++ |++.+
T Consensus 10 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~ 88 (324)
T 3mtl_A 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQ 88 (324)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHH
T ss_pred EcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHH
Confidence 368999999999865 6889999998654432 2335667999999999999999999987765 56776 68988
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++......+++.....++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 89 YLDDCGNIINMHNVKLFLFQLLRGLAYCH----RQKVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 88776667889999999999999999999 578999999999999999999999999998754
No 247
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.81 E-value=6.3e-20 Score=178.99 Aligned_cols=132 Identities=26% Similarity=0.284 Sum_probs=111.8
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||++... +|..||+|.+.... ...+.+.+|+.++++++||||+++++++.... ++|+++|+|.++
T Consensus 28 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 106 (361)
T 3uc3_A 28 IGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYER 106 (361)
T ss_dssp ESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred eccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHH
Confidence 378999999999865 68899999986543 22355778999999999999999999987765 679999999998
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc--EEEccccCccc
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV--AHVSDFGISKL 478 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~--~kl~Dfgl~~~ 478 (481)
+... ..+++..+..++.++++||+||| +.+|+||||||+||+++.++. +||+|||+|+.
T Consensus 107 l~~~-~~~~~~~~~~i~~ql~~~L~~LH----~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 107 ICNA-GRFSEDEARFFFQQLLSGVSYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp HHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 8653 34788899999999999999999 578999999999999987765 99999999874
No 248
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.81 E-value=5.6e-20 Score=176.04 Aligned_cols=136 Identities=25% Similarity=0.361 Sum_probs=114.5
Q ss_pred hhhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhh-hccCccceeecccCCCC-----cccccCCCh
Q 039957 339 TISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRN-VRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
...+.|+||.||++.. .+|..||+|.+..........+.+|++++.+ .+|+||+++++++...+ +||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 3457899999999984 4689999999876554445678889999988 47999999999987665 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc---EEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV---AHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~---~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..++.+|++||+||| +.+|+||||||+||+++.++. +||+|||+++..
T Consensus 99 ~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 99 LSHIHKR-RHFNELEASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp HHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred HHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 9998753 35788899999999999999999 578999999999999998765 999999998754
No 249
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=9.4e-21 Score=176.27 Aligned_cols=168 Identities=24% Similarity=0.288 Sum_probs=102.2
Q ss_pred CCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCE
Q 039957 35 NISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSV 114 (481)
Q Consensus 35 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 114 (481)
++.++..+++++|.++ .++. +. .+++|++|++++|+++ .+| .+..+++|++|+|++|++++..| |..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~~-~~-~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLVS-QK-ELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEEC-HH-HHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCcc-cccc-hh-hcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 4566777788888887 4552 32 5788888888888876 444 57788888888888888886544 788888888
Q ss_pred EEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCC
Q 039957 115 LSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLI 194 (481)
Q Consensus 115 L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 194 (481)
|++++|++++++.. .. ++|++|+|++|++++. +.+..+ ++|+.|++++|++++. | .+..+++|+
T Consensus 90 L~L~~N~l~~l~~~----------~~-~~L~~L~L~~N~l~~~--~~l~~l-~~L~~L~Ls~N~i~~~-~-~l~~l~~L~ 153 (263)
T 1xeu_A 90 LSVNRNRLKNLNGI----------PS-ACLSRLFLDNNELRDT--DSLIHL-KNLEILSIRNNKLKSI-V-MLGFLSKLE 153 (263)
T ss_dssp EECCSSCCSCCTTC----------CC-SSCCEEECCSSCCSBS--GGGTTC-TTCCEEECTTSCCCBC-G-GGGGCTTCC
T ss_pred EECCCCccCCcCcc----------cc-CcccEEEccCCccCCC--hhhcCc-ccccEEECCCCcCCCC-h-HHccCCCCC
Confidence 88888888776332 12 5677777777776642 234333 3455555555555532 2 344455555
Q ss_pred eEecccccceecCCcCCcCCCCCCeeecCCCcC
Q 039957 195 YLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNL 227 (481)
Q Consensus 195 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l 227 (481)
+|++++|++++. ..+..+++|+.|++++|.+
T Consensus 154 ~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 154 VLDLHGNEITNT--GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp EEECTTSCCCBC--TTSTTCCCCCEEEEEEEEE
T ss_pred EEECCCCcCcch--HHhccCCCCCEEeCCCCcc
Confidence 555555554432 2333333333333333333
No 250
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.81 E-value=3.4e-20 Score=178.02 Aligned_cols=135 Identities=24% Similarity=0.433 Sum_probs=114.0
Q ss_pred hccccccceeeeecc------CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS------DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~------~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||+|... ++..||+|.+..... .....+.+|+.++++++|+||+++++++...+ ++|+++
T Consensus 33 lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 112 (322)
T 1p4o_A 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 112 (322)
T ss_dssp EEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred eccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCC
Confidence 478999999998753 367899999865432 33456888999999999999999999987764 678999
Q ss_pred CChhHHhhcCC---------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHN---------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~---------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.... ...++..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 113 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 113 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred CcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence 99999886421 34588899999999999999999 578999999999999999999999999999754
No 251
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.81 E-value=3.1e-20 Score=176.64 Aligned_cols=133 Identities=26% Similarity=0.419 Sum_probs=114.0
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||++... +|..+|+|.+........+.+..|+.++.+++||||+++++++...+ ++|+++|++.++
T Consensus 27 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 106 (302)
T 2j7t_A 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 106 (302)
T ss_dssp EECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHH
T ss_pred eccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHH
Confidence 368999999999865 58899999987665555667888999999999999999999987764 578999999998
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
+......+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 107 MLELDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred HHhhccCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 8765556889999999999999999999 5789999999999999999999999999864
No 252
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.81 E-value=8.1e-20 Score=172.27 Aligned_cols=137 Identities=29% Similarity=0.428 Sum_probs=115.2
Q ss_pred hhhccccccceeeeec-cCCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 339 TISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
...+.|+||.||++.. .+|..+|+|.+..... ...+.+.+|++++++++||||+++++++.... +||+++|+|
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 107 (285)
T 3is5_A 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL 107 (285)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBH
T ss_pred ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcH
Confidence 3447899999999985 4588999999876542 23456888999999999999999999987765 678999999
Q ss_pred hHHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 412 EKRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
.+++.. ....+++..+.+|+.++++||+||| +.+|+||||||+||++ +.++.+||+|||+|+.+
T Consensus 108 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 108 LERIVSAQARGKALSEGYVAELMKQMMNALAYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred HHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 998754 2356788999999999999999999 5789999999999999 45689999999999764
No 253
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.81 E-value=3.5e-20 Score=181.19 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=109.1
Q ss_pred hhccccccceeeeeccC------CcceEEEEEeccchhh-----------hhhhhHHHHHhhhhccCccceeecccCCC-
Q 039957 340 ISLAGSFGSVYKGTISD------GTDVAIKIFNLQRERA-----------FRSFNSECEVLRNVRHQNLIKILSSCSTP- 401 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~------g~~vavK~l~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l~~~~~~~- 401 (481)
..+.|+||.||+|.... +..||+|.+....... ...+..|+..+.+++|+||+++++++...
T Consensus 42 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 121 (364)
T 3op5_A 42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDK 121 (364)
T ss_dssp ECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEE
T ss_pred EEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeecc
Confidence 34789999999997654 4789999986543211 11233455567778899999999988653
Q ss_pred --------CcccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC--CCCcEEEc
Q 039957 402 --------DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD--ENMVAHVS 471 (481)
Q Consensus 402 --------~~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~--~~~~~kl~ 471 (481)
.++|+ +|+|.+++......+++..+.+|+.+|++||+||| +.+|+||||||+|||++ .++.+||+
T Consensus 122 ~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH----~~~iiHrDlkp~Nill~~~~~~~~kl~ 196 (364)
T 3op5_A 122 NGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH----EHEYVHGDIKASNLLLNYKNPDQVYLV 196 (364)
T ss_dssp TTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEESSCTTCEEEC
T ss_pred CCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeEEecCCHHHEEEecCCCCeEEEE
Confidence 15788 99999998876667899999999999999999999 57899999999999999 88999999
Q ss_pred cccCcccC
Q 039957 472 DFGISKLL 479 (481)
Q Consensus 472 Dfgl~~~~ 479 (481)
|||+|+.+
T Consensus 197 DFG~a~~~ 204 (364)
T 3op5_A 197 DYGLAYRY 204 (364)
T ss_dssp CCTTCEES
T ss_pred ECCcceec
Confidence 99999764
No 254
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.81 E-value=4.2e-20 Score=176.87 Aligned_cols=135 Identities=29% Similarity=0.497 Sum_probs=114.1
Q ss_pred hccccccceeeeec------cCCcceEEEEEeccch-hhhhhhhHHHHHhhhh-ccCccceeecccCCCC------cccc
Q 039957 341 SLAGSFGSVYKGTI------SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD------FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l------~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~~~~ 406 (481)
.+.|+||.||++.. .++..||+|.+..... ...+.+.+|+.++.++ +||||++++++|...+ ++|+
T Consensus 35 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~ 114 (316)
T 2xir_A 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 114 (316)
T ss_dssp EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECC
T ss_pred EcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcC
Confidence 47899999999963 3467899999875432 3345688899999999 6999999999987643 5789
Q ss_pred cCCChhHHhhcCCC---------------ccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 039957 407 PNGSLEKRLYSHNY---------------FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVS 471 (481)
Q Consensus 407 ~~g~l~~~l~~~~~---------------~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~ 471 (481)
++|+|.+++..... .+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+
T Consensus 115 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~~kl~ 190 (316)
T 2xir_A 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKIC 190 (316)
T ss_dssp TTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred CCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCCEEEC
Confidence 99999999876432 2788999999999999999999 5789999999999999999999999
Q ss_pred cccCcccC
Q 039957 472 DFGISKLL 479 (481)
Q Consensus 472 Dfgl~~~~ 479 (481)
|||+++.+
T Consensus 191 Dfg~~~~~ 198 (316)
T 2xir_A 191 DFGLARDI 198 (316)
T ss_dssp CCGGGSCT
T ss_pred CCcccccc
Confidence 99999764
No 255
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.81 E-value=6.6e-20 Score=173.67 Aligned_cols=136 Identities=29% Similarity=0.403 Sum_probs=114.9
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
+.+.|+||.||+|.. .++..||+|.+........+.+.+|+.++.+++|+||+++++++...+ ++|+++|+|.+
T Consensus 29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (295)
T 2clq_A 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 108 (295)
T ss_dssp EEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHH
T ss_pred EEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHH
Confidence 447899999999985 468899999987665555567889999999999999999999987654 57899999999
Q ss_pred HhhcCC--CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-CCcEEEccccCcccC
Q 039957 414 RLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-NMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~--~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-~~~~kl~Dfgl~~~~ 479 (481)
++.... ...++.....++.++++||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 109 ~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~ 173 (295)
T 2clq_A 109 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLH----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173 (295)
T ss_dssp HHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred HHHhhccCCCccHHHHHHHHHHHHHHHHHHH----hCCEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence 987642 34567888889999999999999 578999999999999988 899999999998764
No 256
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.81 E-value=1e-19 Score=175.73 Aligned_cols=135 Identities=28% Similarity=0.451 Sum_probs=104.9
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccC-----CC-----CcccccCCC
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-----TP-----DFKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-----~~-----~~~~~~~g~ 410 (481)
.+.|+||.||+|.. ++..||+|.+....... .....++..+..++|+||+++++.+. .. .+||+++|+
T Consensus 21 lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~ 98 (336)
T 3g2f_A 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGS 98 (336)
T ss_dssp EEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCB
T ss_pred cccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCc
Confidence 37899999999976 68899999987543221 11233444556689999999986432 11 167999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCC-----CCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHS-----SAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~-----~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++.... .++..+.+++.+|++||+|||..+. .++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 99 L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~ 170 (336)
T 3g2f_A 99 LXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170 (336)
T ss_dssp HHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeec
Confidence 999987543 4888999999999999999994210 118999999999999999999999999999754
No 257
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.80 E-value=3.6e-20 Score=180.32 Aligned_cols=134 Identities=25% Similarity=0.312 Sum_probs=113.8
Q ss_pred hccccccceeeeec----cCCcceEEEEEeccc----hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccc
Q 039957 341 SLAGSFGSVYKGTI----SDGTDVAIKIFNLQR----ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l----~~g~~vavK~l~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~ 406 (481)
.+.|+||.||++.. .+|..||+|.+.... ....+.+..|++++.++ +|+||+++++++...+ +||+
T Consensus 62 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 141 (355)
T 1vzo_A 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 141 (355)
T ss_dssp EEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCC
T ss_pred eccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecC
Confidence 37899999999986 368899999986432 23345677899999999 5999999999887654 6799
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++|+|.+++... ..+++.....++.+|++||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 142 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 142 NGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp CSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999998753 35788899999999999999999 578999999999999999999999999998754
No 258
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.80 E-value=1.2e-19 Score=174.20 Aligned_cols=134 Identities=25% Similarity=0.376 Sum_probs=115.2
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchh------hhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||++... +|..+|+|.+...... ..+.+.+|+.++.+++||||+++++++.... +||+++
T Consensus 20 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (321)
T 2a2a_A 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG 99 (321)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCC
Confidence 478999999999864 6889999998754322 2346788999999999999999999987765 678999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC----cEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM----VAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~----~~kl~Dfgl~~~~ 479 (481)
|+|.+++... ..+++..+..++.++++||+||| +.+|+||||||+||+++.++ .+||+|||+++..
T Consensus 100 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH----~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 100 GELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp CBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999998753 45788899999999999999999 57899999999999999887 8999999999764
No 259
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.80 E-value=5.8e-20 Score=173.47 Aligned_cols=135 Identities=29% Similarity=0.506 Sum_probs=116.7
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||++... ++..+|+|.+.... ...+.+.+|+.++++++|+||+++++++.... ++|+++|+|.++
T Consensus 21 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 99 (288)
T 3kfa_A 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99 (288)
T ss_dssp SGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHH
T ss_pred cCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence 478999999999865 47889999986543 33456888999999999999999999987765 578999999999
Q ss_pred hhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 415 LYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 415 l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
+... ...+++..+..++.++++|++||| +.+|+||||||+||++++++.+||+|||+++...
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 100 LRECNRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp HHHCCTTTSCHHHHHHHHHHHHHHHHHHH----HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred HHhcccCCccHhHHHHHHHHHHHHHHHHH----HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 8763 345789999999999999999999 5789999999999999999999999999998653
No 260
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.80 E-value=4.3e-20 Score=180.56 Aligned_cols=133 Identities=30% Similarity=0.378 Sum_probs=105.4
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHH-hhhhccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEV-LRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.|+||.||++... ++..+|+|.+..... .....+..|..+ ++.++||||+++++++...+ +||+++|+
T Consensus 46 lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~ 125 (373)
T 2r5t_A 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGE 125 (373)
T ss_dssp EECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred EeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCc
Confidence 378999999999865 578899999876432 223345566665 56789999999999988765 67999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|.+++... ..++......++.+|+.||+||| +.+|+||||||+|||++.++++||+|||+|+.
T Consensus 126 L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 126 LFYHLQRE-RCFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 99988753 34667788889999999999999 57899999999999999999999999999985
No 261
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.80 E-value=5.1e-20 Score=178.84 Aligned_cols=135 Identities=24% Similarity=0.401 Sum_probs=116.1
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhh-----------------hhhhhHHHHHhhhhccCccceeecccCCCC-
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERA-----------------FRSFNSECEVLRNVRHQNLIKILSSCSTPD- 402 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 402 (481)
-+.|+||.||++.. +|..||+|.+....... .+.+.+|++++.+++|+||+++++++...+
T Consensus 39 lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 117 (348)
T 2pml_X 39 LNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDE 117 (348)
T ss_dssp EECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSE
T ss_pred EcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCe
Confidence 37899999999988 89999999987543221 167889999999999999999999988765
Q ss_pred ----cccccCCChhHH------hhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 039957 403 ----FKFMPNGSLEKR------LYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVS 471 (481)
Q Consensus 403 ----~~~~~~g~l~~~------l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~ 471 (481)
+||+++|+|.++ +... ...+++..+..++.++++||+|||. ..+|+||||||+||+++.++.+||+
T Consensus 118 ~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dl~p~Nil~~~~~~~kl~ 194 (348)
T 2pml_X 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN---EKNICHRDVKPSNILMDKNGRVKLS 194 (348)
T ss_dssp EEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TSCEECCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc---cCCEeecCCChHhEEEcCCCcEEEe
Confidence 678999999998 5432 4568899999999999999999993 2789999999999999999999999
Q ss_pred cccCcccC
Q 039957 472 DFGISKLL 479 (481)
Q Consensus 472 Dfgl~~~~ 479 (481)
|||.++..
T Consensus 195 dfg~~~~~ 202 (348)
T 2pml_X 195 DFGESEYM 202 (348)
T ss_dssp CCTTCEEC
T ss_pred cccccccc
Confidence 99999764
No 262
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.80 E-value=1e-19 Score=172.97 Aligned_cols=134 Identities=29% Similarity=0.418 Sum_probs=115.1
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC------------------
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP------------------ 401 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------------------ 401 (481)
.+.|+||.||+|.. .+|..||+|.+... ....+.+.+|+.++++++||||++++++|...
T Consensus 14 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (303)
T 1zy4_A 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFI 92 (303)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEE
T ss_pred eccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEE
Confidence 36899999999985 46899999998643 23346688899999999999999999876431
Q ss_pred CcccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 402 DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 402 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+||+++|+|.+++.......++....+++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 166 (303)
T 1zy4_A 93 QMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166 (303)
T ss_dssp EEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCT
T ss_pred EEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH----hCCeecccCCHHhEEEcCCCCEEEeeCcchhhc
Confidence 15789999999999876667788899999999999999999 578999999999999999999999999999764
No 263
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.80 E-value=5.4e-20 Score=178.55 Aligned_cols=134 Identities=34% Similarity=0.465 Sum_probs=111.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch-----hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-----RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
.+.|+||.||++... +|..||+|.+..... ...+.+.+|+.++++++|+||+++++++.... ++|+++
T Consensus 18 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 96 (346)
T 1ua2_A 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET- 96 (346)
T ss_dssp EEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-
T ss_pred EeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-
Confidence 478999999999865 588999999865322 12346778999999999999999999987664 567774
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++.+++......+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 97 DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH----QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 888888766666788889999999999999999 578999999999999999999999999999865
No 264
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.80 E-value=7.8e-20 Score=191.54 Aligned_cols=136 Identities=23% Similarity=0.396 Sum_probs=116.6
Q ss_pred hccccccceeeeeccC----CcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTISD----GTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~----g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~l 411 (481)
.+.|+||.||+|.... +..+|+|...... ....+.+.+|+.++++++||||+++++++.... +||+++|+|
T Consensus 398 LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~~~~g~L 477 (656)
T 2j0j_A 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL 477 (656)
T ss_dssp EECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBH
T ss_pred EeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEcCCCCcH
Confidence 4789999999998632 4568899876533 233467889999999999999999999986543 679999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
.+++......+++..+..++.++++||+||| +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus 478 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 478 RSFLQVRKFSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp HHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999876667899999999999999999999 5789999999999999999999999999998653
No 265
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=172.82 Aligned_cols=136 Identities=26% Similarity=0.415 Sum_probs=109.6
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccch-----hhhhhhhHHHHHhhhhc---cCccceeecccCCCC--------
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-----RAFRSFNSECEVLRNVR---HQNLIKILSSCSTPD-------- 402 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~-------- 402 (481)
..+.|+||.||++.. .+|..||+|.+..... .....+.+|++++++++ |+||++++++|....
T Consensus 16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~ 95 (308)
T 3g33_A 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVT 95 (308)
T ss_dssp EECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEE
T ss_pred EEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEE
Confidence 347899999999985 4688999999865331 11234567777777665 999999999886532
Q ss_pred --cccccCCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 403 --FKFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 403 --~~~~~~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++|+. |+|.+++.... ..+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 96 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 170 (308)
T 3g33_A 96 LVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIY 170 (308)
T ss_dssp EEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTS
T ss_pred EEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEEeeCcccccc
Confidence 35665 79999887643 34889999999999999999999 577999999999999999999999999999865
Q ss_pred C
Q 039957 480 G 480 (481)
Q Consensus 480 ~ 480 (481)
.
T Consensus 171 ~ 171 (308)
T 3g33_A 171 S 171 (308)
T ss_dssp T
T ss_pred C
Confidence 3
No 266
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.80 E-value=9.4e-20 Score=182.17 Aligned_cols=134 Identities=25% Similarity=0.370 Sum_probs=113.0
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----------cccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~~~ 406 (481)
..+.|+||.||+|... +|..||+|++.... ....+.+.+|+.++++++|+||+++++++.... +||+
T Consensus 33 ~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 112 (432)
T 3n9x_A 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA 112 (432)
T ss_dssp EEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECC
T ss_pred EEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecC
Confidence 3478999999999854 57889999986532 233456889999999999999999999886652 4566
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
. |+|.+++... ..+++.....++.+|++||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 113 ~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH----~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 113 D-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH----ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp S-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred C-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 5 6999888653 45788999999999999999999 578999999999999999999999999999865
No 267
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.80 E-value=1.1e-19 Score=169.68 Aligned_cols=133 Identities=28% Similarity=0.520 Sum_probs=114.6
Q ss_pred hccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCC--C-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTP--D-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~-----~~~~~~g~l 411 (481)
.+.|+||.||+|... |..+|+|.+.... ....+.+.+|+.++++++||||++++++|... . ++|+++|+|
T Consensus 18 lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 96 (271)
T 3kmu_A 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL 96 (271)
T ss_dssp EEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBH
T ss_pred hcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcH
Confidence 378999999999874 8889999987643 23345788999999999999999999998775 2 578999999
Q ss_pred hHHhhcCCC-ccCHHHHHHHHHHHHHHHHHHhcCCCCCC--eeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 412 EKRLYSHNY-FLDILERLNIMIDVGSTLEYLHHGHSSAP--IIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 412 ~~~l~~~~~-~~~~~~~~~i~~~ia~~l~~lH~~~~~~~--i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
.+++..... .+++..+.+++.++++|++||| +.+ |+||||||+||++++++.+||+|||++..
T Consensus 97 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 97 YNVLHEGTNFVVDQSQAVKFALDMARGMAFLH----TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp HHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT----TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh----cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999986543 5899999999999999999999 455 99999999999999999999999998754
No 268
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=9.9e-21 Score=200.64 Aligned_cols=142 Identities=22% Similarity=0.276 Sum_probs=61.3
Q ss_pred ChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCC
Q 039957 30 PPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNL 109 (481)
Q Consensus 30 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 109 (481)
|..|..++.|+.|+|++|++. .+|..++ .+++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+ .+|..|++|
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 344444444444444444444 4444444 3444444444444444 44444444444444444444444 334444444
Q ss_pred CCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCC
Q 039957 110 RHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIP 184 (481)
Q Consensus 110 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p 184 (481)
++|++|+|++|.|+.++ ..+.++++|++|+|++|.|++.+|..+.........+++++|.+++.+|
T Consensus 293 ~~L~~L~L~~N~l~~lp---------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 293 FQLKYFYFFDNMVTTLP---------WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp TTCSEEECCSSCCCCCC---------SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCCEEECCCCCCCccC---------hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 44444444444444331 1233444444444444444444444443321112223444444444444
No 269
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.80 E-value=1e-19 Score=179.52 Aligned_cols=132 Identities=25% Similarity=0.455 Sum_probs=104.5
Q ss_pred hccccccceeeeec-cCCcceEEEEEecc--chhhhhhhhHHHHHhhhhc-cCccceeecccCCCC-------cccccCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR-HQNLIKILSSCSTPD-------FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-------~~~~~~g 409 (481)
.+.|+||.||+|.. .+|..||+|.+... .......+.+|+.++.+++ |+||+++++++...+ ++|++ |
T Consensus 17 lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~ 95 (388)
T 3oz6_A 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-T 95 (388)
T ss_dssp -------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-E
T ss_pred eeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-c
Confidence 47899999999975 46899999988543 2333456778999999997 999999999886443 56777 6
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++... .+++..+..++.++++||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 96 ~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 96 DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH----SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred CHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 888887653 5778888999999999999999 578999999999999999999999999999754
No 270
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.80 E-value=6.6e-20 Score=173.31 Aligned_cols=135 Identities=30% Similarity=0.463 Sum_probs=108.5
Q ss_pred hccccccceeeeecc--CCc--ceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCC
Q 039957 341 SLAGSFGSVYKGTIS--DGT--DVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~--~g~--~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g 409 (481)
.+.|+||.||+|... ++. .||+|.+.... ....+.+.+|+.++.+++|+||+++++++.... ++|+++|
T Consensus 26 lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 105 (291)
T 1u46_A 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLG 105 (291)
T ss_dssp CC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred ecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceeeEecccCC
Confidence 368999999999753 233 58999876532 234467889999999999999999999988765 5788999
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++......+++..+.+++.++++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp BHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred CHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 999998765556888999999999999999999 578999999999999999999999999998765
No 271
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.80 E-value=1e-19 Score=171.31 Aligned_cols=132 Identities=26% Similarity=0.463 Sum_probs=113.1
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCC----------------C-
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST----------------P- 401 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----------------~- 401 (481)
..+.|+||.||++... +|..||+|.+.... ..+.+|+.++.+++|+||+++++++.. .
T Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (284)
T 2a19_B 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTK 93 (284)
T ss_dssp EEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEE
T ss_pred eeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcc
Confidence 3478999999999865 68999999986543 356789999999999999999987743 1
Q ss_pred ----CcccccCCChhHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCc
Q 039957 402 ----DFKFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476 (481)
Q Consensus 402 ----~~~~~~~g~l~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~ 476 (481)
.+||+++|+|.+++... ...+++..+.+++.++++||+||| +.+|+||||||+||++++++.+||+|||++
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 169 (284)
T 2a19_B 94 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169 (284)
T ss_dssp EEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHEEEcCCCCEEECcchhh
Confidence 15789999999998653 346889999999999999999999 578999999999999999999999999998
Q ss_pred ccC
Q 039957 477 KLL 479 (481)
Q Consensus 477 ~~~ 479 (481)
+.+
T Consensus 170 ~~~ 172 (284)
T 2a19_B 170 TSL 172 (284)
T ss_dssp EES
T ss_pred eec
Confidence 764
No 272
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.80 E-value=1.1e-19 Score=177.79 Aligned_cols=132 Identities=27% Similarity=0.403 Sum_probs=106.0
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------cccc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----------~~~~ 406 (481)
.+.|+||.||+|.. .+|..||+|.+.... ....+.+.+|+.++++++|+||+++++++.... ++|+
T Consensus 33 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~ 112 (367)
T 1cm8_A 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM 112 (367)
T ss_dssp C------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred eeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC
Confidence 47899999999985 468999999985432 233456788999999999999999999886542 3566
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++|.+++... .+++.....++.+|++||+||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 113 -~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 113 -GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp -SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred -CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 78999888653 4778889999999999999999 578999999999999999999999999999864
No 273
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.80 E-value=1.1e-19 Score=171.31 Aligned_cols=135 Identities=24% Similarity=0.402 Sum_probs=113.0
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+.... ......+.+|+..+.++ +||||+++++++...+ +||+++|+|
T Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 98 (289)
T 1x8b_A 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 98 (289)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred hcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcH
Confidence 368999999999865 68999999987542 22345677889889888 8999999999987665 678999999
Q ss_pred hHHhhcC---CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-------------------CCcEE
Q 039957 412 EKRLYSH---NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-------------------NMVAH 469 (481)
Q Consensus 412 ~~~l~~~---~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-------------------~~~~k 469 (481)
.+++... ...+++..+.+|+.+|++||+||| +.+|+||||||+||+++. ...+|
T Consensus 99 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~k 174 (289)
T 1x8b_A 99 ADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH----SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174 (289)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEC--------------------CCCEE
T ss_pred HHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEE
Confidence 9998752 245788999999999999999999 578999999999999984 44899
Q ss_pred EccccCcccC
Q 039957 470 VSDFGISKLL 479 (481)
Q Consensus 470 l~Dfgl~~~~ 479 (481)
|+|||.++..
T Consensus 175 l~Dfg~~~~~ 184 (289)
T 1x8b_A 175 IGDLGHVTRI 184 (289)
T ss_dssp ECCCTTCEET
T ss_pred Eccccccccc
Confidence 9999998765
No 274
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.80 E-value=1.1e-19 Score=183.12 Aligned_cols=131 Identities=24% Similarity=0.323 Sum_probs=106.8
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------cccc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----------~~~~ 406 (481)
.+.|+||.||++.. .+|..||+|++.... ....+.+.+|+.+++.++|+||+++++++.... +||+
T Consensus 70 lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~ 149 (464)
T 3ttj_A 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149 (464)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECC
T ss_pred eecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCC
Confidence 47899999999974 468899999987542 233456788999999999999999999886442 4677
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++ +.+.+.. .+++.++..++.++++||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 150 ~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~lH----~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 150 DAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp SEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred CCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 654 6555543 3788889999999999999999 578999999999999999999999999999864
No 275
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=173.27 Aligned_cols=134 Identities=25% Similarity=0.345 Sum_probs=114.3
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..||+|.+..... ...+.+.+|++++.+++|+||+++++++...+ ++|++++++.
T Consensus 11 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 90 (311)
T 4agu_A 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLH 90 (311)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred EeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHH
Confidence 368999999999865 589999998865432 23456778999999999999999999987664 6789999998
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++.. ...+++.....++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 91 ~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 152 (311)
T 4agu_A 91 ELDRY-QRGVPEHLVKSITWQTLQAVNFCH----KHNCIHRDVKPENILITKHSVIKLCDFGFARLL 152 (311)
T ss_dssp HHHHT-SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHhh-hcCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhc
Confidence 87654 345788899999999999999999 578999999999999999999999999999764
No 276
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.80 E-value=1.9e-19 Score=170.71 Aligned_cols=132 Identities=19% Similarity=0.241 Sum_probs=113.3
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||+|.. .+|..||+|.+.... ..+.+.+|+..+.++ +|++++++++++.... ++|+ +|+|.+
T Consensus 18 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~ 94 (298)
T 1csn_A 18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLED 94 (298)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred EeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHH
Confidence 47899999999984 578999999875432 335678899999998 7999999999887654 5688 999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc-----EEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV-----AHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~-----~kl~Dfgl~~~~ 479 (481)
++......+++..+.+++.+|++||+||| +.+|+||||||+||+++.++. +||+|||+|+.+
T Consensus 95 ~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 95 LLDLCGRKFSVKTVAMAAKQMLARVQSIH----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99876666899999999999999999999 678999999999999988776 999999999764
No 277
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.80 E-value=1.1e-19 Score=177.54 Aligned_cols=135 Identities=24% Similarity=0.313 Sum_probs=111.2
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchh-----------hhhhhhHHHHHhhhhccCccceeecccCCC-----C-
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRER-----------AFRSFNSECEVLRNVRHQNLIKILSSCSTP-----D- 402 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~- 402 (481)
..+.|+||.||++...+|..||+|++...... ..+.+.+|+.++.+++|+||+++++++... .
T Consensus 29 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 108 (362)
T 3pg1_A 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHK 108 (362)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCE
T ss_pred EeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcce
Confidence 34789999999998878999999988543211 125678899999999999999999987321 1
Q ss_pred ----cccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 403 ----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 403 ----~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
++|++ |++.+.+......+++..+..++.+|++||+||| +.+|+||||||+||++++++.+||+|||+|+.
T Consensus 109 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (362)
T 3pg1_A 109 LYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH----EAGVVHRDLHPGNILLADNNDITICDFNLARE 183 (362)
T ss_dssp EEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCTTC---
T ss_pred EEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCcCEecCCChHHEEEcCCCCEEEEecCcccc
Confidence 45776 7888888776667899999999999999999999 57899999999999999999999999999974
Q ss_pred C
Q 039957 479 L 479 (481)
Q Consensus 479 ~ 479 (481)
.
T Consensus 184 ~ 184 (362)
T 3pg1_A 184 D 184 (362)
T ss_dssp -
T ss_pred c
Confidence 3
No 278
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.80 E-value=1.8e-19 Score=170.65 Aligned_cols=135 Identities=20% Similarity=0.253 Sum_probs=115.3
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..++|+||.||++... ++..+|+|.+.... ....+.+..|+.++++++|+||+++++++...+ +||+++++
T Consensus 22 ~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 101 (294)
T 2rku_A 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 101 (294)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCC
Confidence 3478999999999865 47889999886542 233456788999999999999999999998765 57899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++... ..+++.++.+++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 102 L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 102 LLELHKRR-KALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp HHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 99987643 35788999999999999999999 578999999999999999999999999998764
No 279
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.80 E-value=7.1e-20 Score=176.72 Aligned_cols=136 Identities=25% Similarity=0.414 Sum_probs=113.7
Q ss_pred hhccccccceeeeecc-CC-----cceEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccc
Q 039957 340 ISLAGSFGSVYKGTIS-DG-----TDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g-----~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~ 406 (481)
..+.|+||.||+|... .+ ..||+|.+.... ....+.+.+|+.++.++ +||||++++++|...+ ++|+
T Consensus 53 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (333)
T 2i1m_A 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132 (333)
T ss_dssp EEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecC
Confidence 3478999999999853 23 469999886543 23345688999999999 8999999999997764 6789
Q ss_pred cCCChhHHhhcC-------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccc
Q 039957 407 PNGSLEKRLYSH-------------NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDF 473 (481)
Q Consensus 407 ~~g~l~~~l~~~-------------~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Df 473 (481)
++|+|.+++... ...+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+||
T Consensus 133 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Df 208 (333)
T 2i1m_A 133 CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA----SKNCIHRDVAARNVLLTNGHVAKIGDF 208 (333)
T ss_dssp TTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGCEEEGGGEEEBCCC
T ss_pred CCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCcccceEEECCCCeEEECcc
Confidence 999999988642 234688899999999999999999 578999999999999999999999999
Q ss_pred cCcccC
Q 039957 474 GISKLL 479 (481)
Q Consensus 474 gl~~~~ 479 (481)
|+|+..
T Consensus 209 g~~~~~ 214 (333)
T 2i1m_A 209 GLARDI 214 (333)
T ss_dssp GGGCCG
T ss_pred cccccc
Confidence 999754
No 280
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.80 E-value=1.4e-19 Score=170.06 Aligned_cols=134 Identities=23% Similarity=0.383 Sum_probs=113.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... ++..+|+|.+..... .....+.+|+.++++++|+||++++++|.... ++|+++|++
T Consensus 17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 96 (279)
T 3fdn_A 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96 (279)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred EecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcH
Confidence 368999999999754 567899999865432 22456788999999999999999999998765 678999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..++.++++|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 97 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 97 YRELQKL-SKFDEQRTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp HHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9988653 34788899999999999999999 678999999999999999999999999988653
No 281
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.80 E-value=2.1e-19 Score=177.06 Aligned_cols=133 Identities=23% Similarity=0.328 Sum_probs=112.7
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhc--cCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVR--HQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..+.|+||.||++...+|..||||.+.... ......+.+|++++.+++ |+||+++++++...+ +| +.+|+
T Consensus 63 ~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~ 141 (390)
T 2zmd_A 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 141 (390)
T ss_dssp EEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEE
T ss_pred EEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCC
Confidence 347899999999988778999999987543 334567889999999997 599999999987765 34 46789
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++.... .+++.++..++.+|++||+||| +.+|+||||||+|||++ ++.+||+|||+|+.+
T Consensus 142 L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~ 204 (390)
T 2zmd_A 142 LNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 204 (390)
T ss_dssp HHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence 999887643 5778889999999999999999 67899999999999996 589999999999865
No 282
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.79 E-value=1.8e-19 Score=173.98 Aligned_cols=135 Identities=20% Similarity=0.253 Sum_probs=115.5
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..++|+||.||++... ++..+|+|.+.... ....+.+..|+.++++++|+||+++++++...+ +||+++++
T Consensus 48 ~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 127 (335)
T 2owb_A 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 127 (335)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred EEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCC
Confidence 3478999999999865 47889999886542 233456788999999999999999999998765 67899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++... ..+++.++..++.++++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 128 L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 128 LLELHKRR-KALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp HHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 99987643 35788999999999999999999 578999999999999999999999999999764
No 283
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.79 E-value=6.5e-20 Score=172.26 Aligned_cols=132 Identities=33% Similarity=0.490 Sum_probs=108.6
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC------cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD------FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~~~~g~l~~~ 414 (481)
.+.|+||.||++.. .|..+|+|.+.... ..+.+.+|++++.+++|+|++++++++.... ++|+++|+|.++
T Consensus 29 lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 105 (278)
T 1byg_A 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 105 (278)
T ss_dssp EEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHH
T ss_pred EecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHH
Confidence 36899999999986 48899999886432 3456888999999999999999999875442 578899999998
Q ss_pred hhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.... ..+++..+.+++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 106 l~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 106 LRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred HHhcccccCCHHHHHHHHHHHHHHHHHHH----hCCccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 87532 23678889999999999999999 578999999999999999999999999998754
No 284
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.79 E-value=2.3e-19 Score=173.39 Aligned_cols=133 Identities=29% Similarity=0.413 Sum_probs=106.5
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhh--hhccCccceeecccCCC----C-----cccccCC
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLR--NVRHQNLIKILSSCSTP----D-----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~----~-----~~~~~~g 409 (481)
.+.|+||.||+|... |..||||.+..... ..+..|.+++. .++|+||+++++++... . +||+++|
T Consensus 45 lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g 120 (337)
T 3mdy_A 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENG 120 (337)
T ss_dssp EEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTC
T ss_pred eecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCC
Confidence 478999999999864 88999999864432 22333444444 45899999999987654 2 5789999
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC----CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++... .+++..+.+++.++++||+|||..+ ..++|+||||||+||+++.++.+||+|||+|+.+
T Consensus 121 ~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 121 SLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp BHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred cHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 999998754 4788999999999999999999420 0128999999999999999999999999999654
No 285
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.79 E-value=2.1e-19 Score=168.54 Aligned_cols=134 Identities=28% Similarity=0.436 Sum_probs=103.6
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..+.|+||.||++.. .+|..||+|.+.... ......+.+|+.++++++|+||+++++++...+ +||+ +|+
T Consensus 20 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 98 (275)
T 2eue_A 20 TLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNE 98 (275)
T ss_dssp ---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CEE
T ss_pred EEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CCc
Confidence 347899999999974 468999999986543 223456788999999999999999999987765 5677 678
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+.+++... ..+++.++.+++.++++|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 99 l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 99 LFDYIVQR-DKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp HHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCeeccCChHhEEECCCCCEEEeecccceec
Confidence 88877653 45788999999999999999999 578999999999999999999999999999764
No 286
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.79 E-value=2.2e-19 Score=168.31 Aligned_cols=134 Identities=23% Similarity=0.396 Sum_probs=115.2
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||++... +|..||+|.+..... ...+.+.+|+.++++++|+||+++++++...+ +||+++|+|.+
T Consensus 15 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (276)
T 2yex_A 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94 (276)
T ss_dssp EEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGG
T ss_pred eecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHH
Confidence 368999999999864 688999999875432 33456788999999999999999999987664 57889999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++.. ...+++.....++.++++||+||| +.+|+||||||+||++++++.+||+|||.++.+
T Consensus 95 ~l~~-~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 95 RIEP-DIGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp GSBT-TTBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHhh-ccCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 8864 345788999999999999999999 578999999999999999999999999998753
No 287
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.79 E-value=2.7e-19 Score=168.46 Aligned_cols=134 Identities=27% Similarity=0.387 Sum_probs=114.7
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchh------hhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||++... +|..+|+|.+...... ..+.+.+|+.++++++|+||+++++++.... ++|+++
T Consensus 13 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 92 (283)
T 3bhy_A 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 92 (283)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred hcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCC
Confidence 368999999999865 6899999998654321 2456788999999999999999999988765 678999
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC----cEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM----VAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~----~~kl~Dfgl~~~~ 479 (481)
++|.+++... ..+++..+..++.++++||+||| +.+|+||||||+||++++++ .+||+|||+++..
T Consensus 93 ~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 93 GELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp CBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999988643 35788999999999999999999 57899999999999998877 8999999998764
No 288
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.79 E-value=2.3e-19 Score=173.23 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=112.7
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhc-cCccceeecccCC-------CC------cc
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-HQNLIKILSSCST-------PD------FK 404 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~-------~~------~~ 404 (481)
..+.|+||.||++.. .+|..||+|.+........+.+.+|+.++.+++ |+||+++++++.. .. ++
T Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e 114 (337)
T 3ll6_A 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE 114 (337)
T ss_dssp EEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEE
T ss_pred EEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEE
Confidence 347899999999985 468999999986655555667889999999996 9999999988731 11 34
Q ss_pred cccCCChhHHhhc--CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCC--eeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 405 FMPNGSLEKRLYS--HNYFLDILERLNIMIDVGSTLEYLHHGHSSAP--IIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 405 ~~~~g~l~~~l~~--~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~--i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+. |+|.+++.. ....+++..+.+|+.+|++||+||| +.+ |+||||||+||++++++.+||+|||+++..
T Consensus 115 ~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 115 LCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH----RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp CCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred ecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 664 899888764 3446899999999999999999999 455 999999999999999999999999999765
No 289
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.79 E-value=1.1e-19 Score=176.28 Aligned_cols=135 Identities=26% Similarity=0.402 Sum_probs=110.7
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc-----hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR-----ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
.+.|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++++++||||++++++|...+ +||+++|
T Consensus 34 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg 113 (345)
T 3hko_A 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGG 113 (345)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCC
Confidence 37899999999985 457889999986542 233456888999999999999999999998765 6799999
Q ss_pred ChhHHhhcC---------------------------------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCe
Q 039957 410 SLEKRLYSH---------------------------------------NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450 (481)
Q Consensus 410 ~l~~~l~~~---------------------------------------~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i 450 (481)
+|.+++... ....++.....|+.++++||+||| +.+|
T Consensus 114 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i 189 (345)
T 3hko_A 114 HLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH----NQGI 189 (345)
T ss_dssp BHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH----HTTE
T ss_pred cHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----HCCc
Confidence 999987420 112245667789999999999999 5789
Q ss_pred eeCCCCCCCeeeCCCC--cEEEccccCcccC
Q 039957 451 IHCDLKPTSILLDENM--VAHVSDFGISKLL 479 (481)
Q Consensus 451 ~H~dlk~~nill~~~~--~~kl~Dfgl~~~~ 479 (481)
+||||||+||+++.++ .+||+|||+|+.+
T Consensus 190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~ 220 (345)
T 3hko_A 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220 (345)
T ss_dssp ECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred cccCCChhhEEEecCCCceEEEeeccccccc
Confidence 9999999999998766 8999999999753
No 290
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.79 E-value=2.3e-19 Score=188.59 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=113.6
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
.+.|+||.||++... ++..||+|.+.... ....+.+..|..++..+ +|++|+++.+++...+ +||+++|+
T Consensus 349 LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~ 428 (674)
T 3pfq_A 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD 428 (674)
T ss_dssp SSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCB
T ss_pred EccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCc
Confidence 478999999999864 57889999987542 22344567788888876 7999999999887765 68999999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
|.+++... ..+++..+..++.+|+.||+||| +.+||||||||+|||+|+++++||+|||+|+.
T Consensus 429 L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH----~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 429 LMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp HHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99998754 35788899999999999999999 57899999999999999999999999999985
No 291
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.79 E-value=2.2e-19 Score=171.48 Aligned_cols=135 Identities=23% Similarity=0.433 Sum_probs=109.3
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++.. .+|..||+|.+.... ......+.+|+.++.+++|+||+++++++...+ ++|+++|+|
T Consensus 40 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 119 (310)
T 2wqm_A 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119 (310)
T ss_dssp EECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBH
T ss_pred ecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCH
Confidence 47899999999985 578999999987532 334456888999999999999999999987654 678999999
Q ss_pred hHHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++.. ....+++....+++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 998764 3456788899999999999999999 578999999999999999999999999998754
No 292
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.79 E-value=1.9e-19 Score=174.46 Aligned_cols=134 Identities=22% Similarity=0.334 Sum_probs=112.9
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhcc--CccceeecccCCCCccc----ccCCCh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRH--QNLIKILSSCSTPDFKF----MPNGSL 411 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~----~~~g~l 411 (481)
..+.|+||.||++...++..||+|.+.... ......+.+|++++.+++| +||+++++++......| +.+|+|
T Consensus 16 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L 95 (343)
T 3dbq_A 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDL 95 (343)
T ss_dssp EESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEH
T ss_pred EEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCCCCCH
Confidence 347899999999988888999999987543 2334678899999999987 99999999988765222 467899
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++.++..++.++++||+||| +.+|+||||||+|||++ ++.+||+|||+|+.+
T Consensus 96 ~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH----~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 96 NSWLKKK-KSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp HHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 9988764 45788899999999999999999 57899999999999997 688999999999865
No 293
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.79 E-value=2.2e-19 Score=171.01 Aligned_cols=134 Identities=25% Similarity=0.412 Sum_probs=112.6
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
-+.|+||.||++... +|..||+|.+..........+.+|+.++.+++||||+++++++...+ +||+++|+|.++
T Consensus 17 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 96 (304)
T 2jam_A 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR 96 (304)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred ccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHH
Confidence 478999999999854 68999999987654444456888999999999999999999987765 578999999998
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
+... ..+++.....++.++++|++||| +.+|+||||||+||++ ++++.+||+|||+++..
T Consensus 97 l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 97 ILER-GVYTEKDASLVIQQVLSAVKYLH----ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp HHHH-SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 8643 34778899999999999999999 5789999999999999 78899999999998754
No 294
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=2.1e-19 Score=173.00 Aligned_cols=292 Identities=11% Similarity=0.077 Sum_probs=171.4
Q ss_pred eccCcchhC--CCCCCeeeCcCCcccccCChhccC-CcCCCEEEeeCCcCc--cccChhhhcCCCCccEEEccCccceee
Q 039957 3 GQIPTEIGN--LQNLKSLFLGANNLSGLIPPMIFN-ISTIRNLNLGGNRLS--GHLPSMIGHSLPNIKYLELGDNNLIGT 77 (481)
Q Consensus 3 g~lp~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~--~~~p~~~~~~l~~L~~L~L~~N~l~~~ 77 (481)
|.++..+.. +.+++.|.++++ +....-..+.. +++|++|||++|++. ...+. .++.++.+.+..|. +
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~----~~~~~~~~~~~~~~---I 84 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG----TYPNGKFYIYMANF---V 84 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS----SSGGGCCEEECTTE---E
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc----cccccccccccccc---c
Confidence 555555543 677999999875 22222223444 788999999999987 21111 23335666666663 3
Q ss_pred cchhccc--------cccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEc
Q 039957 78 IPNSITN--------ATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLIL 149 (481)
Q Consensus 78 ~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L 149 (481)
.+.+|.+ +++|+.|+|.. .++.+.+.+|.++++|+.++++.|.++.+++.+| ..+.++..+.+
T Consensus 85 ~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF--------~~~~~l~~l~~ 155 (329)
T 3sb4_A 85 PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEAL--------ADSVTAIFIPL 155 (329)
T ss_dssp CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSS--------CTTTCEEEECT
T ss_pred CHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhh--------cCCCceEEecC
Confidence 3456777 99999999988 8888888889999999999999999888876654 34556666665
Q ss_pred cCCcc----ceeCChhhhhcccCcc-EEEccCCceeecCCccc----ccCCCCCeEecccccceecCCcCCcCCCCCCee
Q 039957 150 SGNPL----GGILPPSIGNFSTSLQ-RFSASECKLKGTIPKEI----GHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGF 220 (481)
Q Consensus 150 s~N~l----~~~~p~~~~~~~~~L~-~L~l~~n~l~~~~p~~~----~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 220 (481)
..+.. ....+..|..+ ..|+ .+.+.... .++..+ ....++..+.+.++-...........+++|+.+
T Consensus 156 ~~~~~~~~~~~i~~~~f~~~-~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l 231 (329)
T 3sb4_A 156 GSSDAYRFKNRWEHFAFIEG-EPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSL 231 (329)
T ss_dssp TCTHHHHTSTTTTTSCEEES-CCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEE
T ss_pred cchhhhhccccccccccccc-cccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEE
Confidence 55322 11111222222 1233 23332211 111111 123344444444331110000001125566666
Q ss_pred ecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCC-cEEcCCCcCcccCCcchhccccCcEEEccCccc
Q 039957 221 FLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLR-ELDLGSNKLTSSIPSSLWSLGYILEINLSSNLL 299 (481)
Q Consensus 221 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 299 (481)
++++|+++...+.+|.++.+|+.+++.+| ++.+.+.+|.++++|+ .+++.+ .++...+.+|.++..|+.+++++|.+
T Consensus 232 ~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 232 DISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp ECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred ECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 66666666655666666666666666666 5556666666666676 666666 55555566666667777777766666
Q ss_pred CCCCCCccccCCcCcEEE
Q 039957 300 NDSLPSNVQKLKVLRVLD 317 (481)
Q Consensus 300 ~~~~p~~~~~l~~L~~L~ 317 (481)
+.+.+..|.++++|+.+.
T Consensus 310 ~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 310 TTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEECTTTTCTTCCCCEEE
T ss_pred CccchhhhcCCcchhhhc
Confidence 666666677777776664
No 295
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.79 E-value=2.2e-19 Score=175.38 Aligned_cols=135 Identities=32% Similarity=0.472 Sum_probs=115.0
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccch--------hhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--------RAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FK 404 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~ 404 (481)
..++|+||.||++... +|..||||.+..... ...+.+..|+.++.++ +|+||+++++++.... +|
T Consensus 101 ~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 180 (365)
T 2y7j_A 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFD 180 (365)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEEC
T ss_pred EEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEE
Confidence 3478999999999875 689999999865431 1234577899999998 7999999999987654 67
Q ss_pred cccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 405 FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 405 ~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+++|+|.+++... ..+++..+..++.+|++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 181 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH----~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 181 LMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred eCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999988753 35788999999999999999999 578999999999999999999999999998764
No 296
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.79 E-value=1.9e-19 Score=173.20 Aligned_cols=135 Identities=34% Similarity=0.551 Sum_probs=112.0
Q ss_pred hhccccccceeeeecc-CCcc--eEEEEEeccc-hhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCC
Q 039957 340 ISLAGSFGSVYKGTIS-DGTD--VAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~--vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
..+.|+||.||++... +|.. +++|.+.... ....+.+.+|+.++.++ +||||+++++++...+ +||+++|
T Consensus 32 ~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 111 (327)
T 1fvr_A 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 111 (327)
T ss_dssp EEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCC
Confidence 3478999999999864 4554 4888876432 33445688899999999 8999999999987665 6789999
Q ss_pred ChhHHhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEcccc
Q 039957 410 SLEKRLYSHN---------------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFG 474 (481)
Q Consensus 410 ~l~~~l~~~~---------------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfg 474 (481)
+|.+++.... ..+++.++..++.++++||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 112 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kL~Dfg 187 (327)
T 1fvr_A 112 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIADFG 187 (327)
T ss_dssp BHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECCTT
T ss_pred CHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCccceEEEcCCCeEEEcccC
Confidence 9999987543 35788999999999999999999 5789999999999999999999999999
Q ss_pred Cccc
Q 039957 475 ISKL 478 (481)
Q Consensus 475 l~~~ 478 (481)
+++.
T Consensus 188 ~~~~ 191 (327)
T 1fvr_A 188 LSRG 191 (327)
T ss_dssp CEES
T ss_pred cCcc
Confidence 9874
No 297
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.79 E-value=2.2e-19 Score=172.37 Aligned_cols=135 Identities=29% Similarity=0.408 Sum_probs=111.0
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch--------hhhhhhhHHHHHhhhhccCccceeecccCCCC----ccccc
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--------RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~ 407 (481)
.+.|+||.||++... +|..||+|.+..... .....+.+|++++.+++|+||+++++++.... ++|++
T Consensus 18 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~ 97 (322)
T 2ycf_A 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELME 97 (322)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCT
T ss_pred EecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCceEEEEecCC
Confidence 478999999999854 578999999865321 12345788999999999999999999987654 67899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC---cEEEccccCcccCC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM---VAHVSDFGISKLLG 480 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~---~~kl~Dfgl~~~~~ 480 (481)
+|+|.+++... ..+++.....++.+|++||+||| +.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 98 ~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 168 (322)
T 2ycf_A 98 GGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168 (322)
T ss_dssp TEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred CCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence 99999988643 45788899999999999999999 57899999999999998765 49999999998653
No 298
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=6.4e-20 Score=176.68 Aligned_cols=287 Identities=12% Similarity=0.063 Sum_probs=196.0
Q ss_pred CCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccce--eecchhccccccCceeecccCcceecCcccccC----
Q 039957 35 NISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLI--GTIPNSITNATKLIILDLGFNTFSGHIPNTFGN---- 108 (481)
Q Consensus 35 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 108 (481)
.+.+++.|.++++- ...--..+...+++|++|||++|++. ...+..+. .+..+.+..|. +.+.+|.+
T Consensus 23 ~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~---I~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANF---VPAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTE---ECTTTTEEEETT
T ss_pred hhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccccc---ccccccccccc---cCHHHhcccccc
Confidence 35678899998752 21111233323788999999999987 33333332 24555555553 44566777
Q ss_pred ----CCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCce----e
Q 039957 109 ----LRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKL----K 180 (481)
Q Consensus 109 ----l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l----~ 180 (481)
+++|+.++|.. +++.++..+ +.+|++|+.+++++|.++.+.+..|... ..+..+....+.. .
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~a--------F~~~~~L~~l~l~~n~i~~i~~~aF~~~-~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAA--------FKGCDNLKICQIRKKTAPNLLPEALADS-VTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTT--------TTTCTTCCEEEBCCSSCCEECTTSSCTT-TCEEEECTTCTHHHHTST
T ss_pred cccccCCCcEEECCc-cccchhHHH--------hhcCcccceEEcCCCCccccchhhhcCC-CceEEecCcchhhhhccc
Confidence 99999999998 888886655 4678899999999999987777777664 3455665554322 1
Q ss_pred ecCCcccccCCCCC-eEeccccc-ceecCCcCCcCCCCCCeeecCCCcCCCCCCccc-cCccCCCeeecCCCeeeecCCc
Q 039957 181 GTIPKEIGHLRGLI-YLSLGFND-LNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNL-CHLEMLNLLHLGGNKLSGHIPP 257 (481)
Q Consensus 181 ~~~p~~~~~l~~L~-~L~l~~N~-l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~ 257 (481)
..-+..|.++..|+ .+.+.... +...+...-....++..+.+.++- .......+ ..+++|+.+++++|+++.+.+.
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~ 244 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKL-DNADFKLIRDYMPNLVSLDISKTNATTIPDF 244 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECC-CHHHHHHHHHHCTTCCEEECTTBCCCEECTT
T ss_pred cccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeee-cHHHHHHHHHhcCCCeEEECCCCCcceecHh
Confidence 12234466666666 44443321 111111111234455555554431 11111111 2367899999999999988888
Q ss_pred ccccCCCCCcEEcCCCcCcccCCcchhccccCc-EEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCC
Q 039957 258 CLASLTSLRELDLGSNKLTSSIPSSLWSLGYIL-EINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVD 336 (481)
Q Consensus 258 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 336 (481)
+|.++++|+.+++.+| ++...+.+|.++..|+ .+++.+ .++.+.+..|.++++|+.+++++|++....+.+|.++++
T Consensus 245 aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~ 322 (329)
T 3sb4_A 245 TFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVP 322 (329)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCC
T ss_pred hhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcc
Confidence 9999999999999998 8778888899999999 999988 777777889999999999999999999888889999999
Q ss_pred hhhhh
Q 039957 337 LETIS 341 (481)
Q Consensus 337 L~~l~ 341 (481)
|+.++
T Consensus 323 L~~ly 327 (329)
T 3sb4_A 323 SKLIY 327 (329)
T ss_dssp CCEEE
T ss_pred hhhhc
Confidence 88764
No 299
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=172.60 Aligned_cols=133 Identities=29% Similarity=0.380 Sum_probs=111.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhHH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKR 414 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~~ 414 (481)
.+.|+||.||+|... +|..||+|.+.... ....+.+|+.++.+++|+||+++++++...+ ++|+++|+|.++
T Consensus 37 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 114 (314)
T 3com_A 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114 (314)
T ss_dssp CC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred eccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHH
Confidence 468999999999865 58899999986542 3456788999999999999999999887654 678999999999
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+......+++..+..++.++++|++||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 115 ~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 115 IRLRNKTLTEDEIATILQSTLKGLEYLH----FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 8754556889999999999999999999 578999999999999999999999999998654
No 300
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.79 E-value=5.7e-20 Score=174.76 Aligned_cols=136 Identities=28% Similarity=0.409 Sum_probs=101.5
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
..+.|+||.||++... +|..||+|.+.... ....+.+.+|+.++.+++||||+++++++...+ ++|+++|+|.
T Consensus 22 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 101 (303)
T 2vwi_A 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101 (303)
T ss_dssp ECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHH
T ss_pred eeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchH
Confidence 3478999999999854 68899999886543 233456788999999999999999999887664 6789999999
Q ss_pred HHhhc-------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYS-------HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~-------~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++.. ....+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH----KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp HHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred HHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 98863 2345789999999999999999999 578999999999999999999999999998653
No 301
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.79 E-value=1.5e-19 Score=171.06 Aligned_cols=135 Identities=24% Similarity=0.406 Sum_probs=113.1
Q ss_pred hhccccccceeeeec---cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTI---SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l---~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~~~~g~ 410 (481)
..+.|+||.||++.. ..+..||+|.+.... ....+.+.+|++++++++|+||+++++++.... ++|+++|+
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 103 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP 103 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCCC
Confidence 347899999999954 246789999986543 223457889999999999999999999985443 57899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++... ..+++.....++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 104 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 104 LNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp HHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred HHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH----hCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 99998764 34788899999999999999999 578999999999999999999999999998765
No 302
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.79 E-value=1.8e-19 Score=168.47 Aligned_cols=136 Identities=26% Similarity=0.482 Sum_probs=107.7
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccch----hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRE----RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..+.|+||.||++... |..+|+|.+..... ...+.+.+|+.++++++|+||++++++|...+ +||+++|+
T Consensus 14 ~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (271)
T 3dtc_A 14 IIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP 92 (271)
T ss_dssp EEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEE
T ss_pred eeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCC
Confidence 3478999999999864 88899998765432 22456788999999999999999999998765 67899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC--------CCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE--------NMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~--------~~~~kl~Dfgl~~~~ 479 (481)
|.+++.. ..+++.....++.++++|++|||... ..+|+||||||+||++++ ++.+||+|||+++..
T Consensus 93 L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~-~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~ 166 (271)
T 3dtc_A 93 LNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEA-IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166 (271)
T ss_dssp HHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSS-SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC-CCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence 9998854 35788899999999999999999533 234999999999999986 778999999999754
No 303
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.79 E-value=4.4e-20 Score=180.92 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=96.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhh--ccCccceeecccC---------------
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNV--RHQNLIKILSSCS--------------- 399 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l--~h~niv~l~~~~~--------------- 399 (481)
-+.|+||.||+|... +|..||+|.+..... ...+.+..|+.++..+ +|||+++++..+.
T Consensus 70 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~ 149 (371)
T 3q60_A 70 LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFA 149 (371)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSS
T ss_pred ccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCee
Confidence 478999999999854 689999999977542 2344566775544444 6999887543221
Q ss_pred --------------CCCcccccCCChhHHhhcCCCccCHHHH------HHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCC
Q 039957 400 --------------TPDFKFMPNGSLEKRLYSHNYFLDILER------LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTS 459 (481)
Q Consensus 400 --------------~~~~~~~~~g~l~~~l~~~~~~~~~~~~------~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~n 459 (481)
...+||++ |+|.+++.......++..+ ..++.+|++||+||| +.+||||||||+|
T Consensus 150 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH----~~~ivHrDikp~N 224 (371)
T 3q60_A 150 QLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ----SKGLVHGHFTPDN 224 (371)
T ss_dssp BCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH----HTTEEETTCSGGG
T ss_pred eccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH----HCCCccCcCCHHH
Confidence 00156888 9999998764333455556 788899999999999 5789999999999
Q ss_pred eeeCCCCcEEEccccCcccCC
Q 039957 460 ILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 460 ill~~~~~~kl~Dfgl~~~~~ 480 (481)
||++.++.+||+|||+|+...
T Consensus 225 Ill~~~~~~kL~DFG~a~~~~ 245 (371)
T 3q60_A 225 LFIMPDGRLMLGDVSALWKVG 245 (371)
T ss_dssp EEECTTSCEEECCGGGEEETT
T ss_pred EEECCCCCEEEEecceeeecC
Confidence 999999999999999998653
No 304
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.79 E-value=1.9e-19 Score=168.83 Aligned_cols=134 Identities=31% Similarity=0.540 Sum_probs=115.3
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+..... ...+.+.+|+..+++++|+||+++++++...+ ++|+++++|
T Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (276)
T 2h6d_A 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98 (276)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred ecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcH
Confidence 368999999999865 689999999865432 23446788999999999999999999987765 578999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++....+++.++++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 99 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 99 FDYICKH-GRVEEMEARRLFQQILSAVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp HHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred HHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9988653 34788899999999999999999 578999999999999999999999999998765
No 305
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.79 E-value=3.3e-19 Score=167.87 Aligned_cols=134 Identities=24% Similarity=0.461 Sum_probs=113.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..+|+|.+.... ....+.+.+|+.++++++|+||+++++++.... ++|+++|++.
T Consensus 14 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 93 (284)
T 3kk8_A 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 93 (284)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred hcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHH
Confidence 468999999999854 58899999986543 233456788999999999999999999987765 5789999998
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc---EEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV---AHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~---~kl~Dfgl~~~~ 479 (481)
+.+... ..+++..+..++.++++|++||| +.+|+||||||+||+++.++. +||+|||+++..
T Consensus 94 ~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 94 EDIVAR-EFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp HHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred HHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 887653 35788899999999999999999 578999999999999987655 999999998654
No 306
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.79 E-value=2.8e-19 Score=170.15 Aligned_cols=133 Identities=30% Similarity=0.413 Sum_probs=115.2
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch-hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||+|.. .+|..||+|.+..... ...+.+.+|+.++.+++|+||+++++++.... ++|+++|+|.+
T Consensus 30 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 109 (303)
T 3a7i_A 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD 109 (303)
T ss_dssp EEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHH
T ss_pred hcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHH
Confidence 36899999999975 4688999999876542 33467888999999999999999999887654 67899999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++.. ..+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 110 ~~~~--~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 169 (303)
T 3a7i_A 110 LLEP--GPLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169 (303)
T ss_dssp HHTT--SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHhc--CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChheEEECCCCCEEEeecccceec
Confidence 8864 35788999999999999999999 578999999999999999999999999998754
No 307
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.79 E-value=1.5e-19 Score=178.74 Aligned_cols=131 Identities=23% Similarity=0.341 Sum_probs=108.7
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhh-hccCccceeecccCC----C-----CcccccC
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRN-VRHQNLIKILSSCST----P-----DFKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~-----~~~~~~~ 408 (481)
..+.|+||.||++... +|..||+|.+... ..+.+|+.++.+ .+|+||+++++++.. . .+||+++
T Consensus 69 ~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 69 VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred eeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 3478999999999854 5889999998632 345678887754 589999999987753 1 2679999
Q ss_pred CChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.... ..+++.++..|+.+|++||+||| +.+||||||||+|||++. ++.+||+|||+|+..
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 99999998643 45889999999999999999999 578999999999999998 789999999999864
No 308
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.79 E-value=2.6e-19 Score=168.69 Aligned_cols=134 Identities=25% Similarity=0.406 Sum_probs=114.2
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... ++..||+|.+..... .....+.+|+.++++++|+||+++++++...+ +||+++|+|
T Consensus 22 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 101 (284)
T 2vgo_A 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101 (284)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred ecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcH
Confidence 368999999999865 578899999865432 22356788999999999999999999987765 578899999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++.....++.++++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 102 YKELQKH-GRFDEQRSATFMEELADALHYCH----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp HHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9988753 34788899999999999999999 678999999999999999999999999998653
No 309
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.79 E-value=2.4e-19 Score=174.40 Aligned_cols=134 Identities=25% Similarity=0.426 Sum_probs=112.2
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-------------cc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------------FK 404 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------------~~ 404 (481)
.+.|+||.||++.. .+|..||+|.+..... .....+.+|+.++++++|+||++++++|.... ++
T Consensus 25 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e 104 (351)
T 3mi9_A 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD 104 (351)
T ss_dssp CSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEE
T ss_pred EecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEe
Confidence 37899999999986 5689999998865432 22345678999999999999999999876531 45
Q ss_pred cccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 405 FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 405 ~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|++ |++.+.+......+++.++..++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+.+
T Consensus 105 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 105 FCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH----RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp CCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred ccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 776 5777777766567889999999999999999999 578999999999999999999999999999754
No 310
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.79 E-value=1.4e-19 Score=170.03 Aligned_cols=139 Identities=24% Similarity=0.406 Sum_probs=112.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCC--C-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTP--D-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~-----~~~~~~g~ 410 (481)
.+.|+||.||++... +|..+++|.+.... ....+.+.+|+.++++++|+||+++++++... . +||+++|+
T Consensus 14 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 93 (279)
T 2w5a_A 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD 93 (279)
T ss_dssp EEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEE
T ss_pred ccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCC
Confidence 368999999999864 68899999987543 23345688899999999999999999977432 2 67899999
Q ss_pred hhHHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCC-CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 411 LEKRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGH-SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~-~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++.. ....+++..+.+++.++++||+|||... ...+|+||||||+||++++++.+||+|||+++..
T Consensus 94 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 94 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred HHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 9998865 2344889999999999999999999421 0122999999999999999999999999998754
No 311
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.79 E-value=1.8e-19 Score=175.82 Aligned_cols=134 Identities=25% Similarity=0.303 Sum_probs=114.6
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||++... +|..+|+|.+.... ....+.+.+|+.++.+++|+||+++++++...+ ++|+++|+|.+
T Consensus 41 lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 120 (360)
T 3eqc_A 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120 (360)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred ecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHH
Confidence 368999999999865 68899999987653 333457889999999999999999999887664 67999999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
++... ..+++....+++.++++|++|||+ ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 181 (360)
T 3eqc_A 121 VLKKA-GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181 (360)
T ss_dssp HHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence 98753 347788899999999999999994 13799999999999999999999999999864
No 312
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.79 E-value=2.7e-19 Score=182.08 Aligned_cols=134 Identities=25% Similarity=0.394 Sum_probs=109.7
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... ++..+|+|.+.... ......+.+|+.++++++||||++++++|.... +||+++|+|.
T Consensus 45 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~ 124 (494)
T 3lij_A 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124 (494)
T ss_dssp EECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHH
Confidence 478999999999864 68889999987543 223456788999999999999999999998765 6799999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~~ 479 (481)
+.+... ..+++..+..|+.+|++||+||| +.+||||||||+|||++. ++.+||+|||+|+.+
T Consensus 125 ~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 125 DEIIHR-MKFNEVDAAVIIKQVLSGVTYLH----KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp HHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred HHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 887643 35788899999999999999999 578999999999999976 456999999998764
No 313
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.79 E-value=3.6e-19 Score=168.22 Aligned_cols=135 Identities=25% Similarity=0.385 Sum_probs=112.5
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCC---------Cccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTP---------DFKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------~~~~~~ 407 (481)
.-+.|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|+||+++++++... .++|++
T Consensus 33 ~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 112 (290)
T 1t4h_A 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT 112 (290)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCC
T ss_pred eccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecC
Confidence 3478999999999864 57889999886543 23345688899999999999999999877532 157899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCC--eeeCCCCCCCeeeC-CCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP--IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~--i~H~dlk~~nill~-~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++... ..+++..+..++.++++||+||| +.+ |+||||||+||+++ +++.+||+|||+++..
T Consensus 113 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 113 SGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp SCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred CCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH----cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999998753 34788899999999999999999 455 99999999999998 7899999999998754
No 314
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.79 E-value=4.4e-19 Score=168.27 Aligned_cols=134 Identities=30% Similarity=0.388 Sum_probs=114.5
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---------hhhhhhhHHHHHhhhhc-cCccceeecccCCCC-----cc
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---------RAFRSFNSECEVLRNVR-HQNLIKILSSCSTPD-----FK 404 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-----~~ 404 (481)
.+.|++|.||++... +|..||+|.+..... ...+.+.+|++++.+++ ||||+++++++.... +|
T Consensus 25 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 104 (298)
T 1phk_A 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104 (298)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEe
Confidence 368999999999864 688999999875431 22345778999999996 999999999987765 57
Q ss_pred cccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 405 FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 405 ~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+++|+|.+++... ..+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 105 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 105 LMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 89999999998753 35788899999999999999999 578999999999999999999999999998764
No 315
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.78 E-value=2.3e-19 Score=182.16 Aligned_cols=135 Identities=25% Similarity=0.415 Sum_probs=115.3
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc---hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..+.|+||.||++... +|..||||.+.... ......+.+|+.++++++||||+++++++.... ++|+++|+
T Consensus 33 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~ 112 (484)
T 3nyv_A 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 112 (484)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCC
Confidence 3478999999999864 68999999986543 233456888999999999999999999998765 57889999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
|.+++... ..+++..+..++.+|++||+||| +.+|+||||||+|||+ +.++.+||+|||+|+.+
T Consensus 113 L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 113 LFDEIISR-KRFSEVDAARIIRQVLSGITYMH----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp HHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99988754 45788899999999999999999 5789999999999999 46789999999998754
No 316
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.78 E-value=3.9e-19 Score=171.90 Aligned_cols=130 Identities=26% Similarity=0.451 Sum_probs=109.3
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCChhH
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
.+.|+||.||++... +|..+|+|.+.... ....+|++++.++ +||||+++++++...+ +||+++|+|.+
T Consensus 30 lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~ 105 (342)
T 2qr7_A 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLD 105 (342)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred EeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHH
Confidence 478999999999864 68899999986543 2345688888887 7999999999988765 67899999999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-C---CcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-N---MVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-~---~~~kl~Dfgl~~~~ 479 (481)
++... ..+++.+...++.+|++||+||| +.+|+||||||+|||+.+ + +.+||+|||+|+.+
T Consensus 106 ~i~~~-~~~~~~~~~~~~~qi~~al~~lH----~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 106 KILRQ-KFFSEREASAVLFTITKTVEYLH----AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp HHHTC-TTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 88754 45788899999999999999999 578999999999999844 3 35999999999864
No 317
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.78 E-value=2.2e-19 Score=172.77 Aligned_cols=134 Identities=26% Similarity=0.421 Sum_probs=110.0
Q ss_pred hccccccceeeeec------cCCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccC
Q 039957 341 SLAGSFGSVYKGTI------SDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l------~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~ 408 (481)
.+.|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++|+||+++++++.... ++|+++
T Consensus 38 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (327)
T 2yfx_A 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117 (327)
T ss_dssp CC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred EcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCC
Confidence 47899999999974 246789999986432 334456888999999999999999999988764 578999
Q ss_pred CChhHHhhcCC------CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCccc
Q 039957 409 GSLEKRLYSHN------YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKL 478 (481)
Q Consensus 409 g~l~~~l~~~~------~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~ 478 (481)
|+|.+++.... ..+++..+.+++.++++||+||| +.+|+||||||+||+++. +..+||+|||+++.
T Consensus 118 ~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp EEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 99999987643 34788999999999999999999 578999999999999984 45699999999863
No 318
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.78 E-value=3.4e-19 Score=170.72 Aligned_cols=132 Identities=25% Similarity=0.416 Sum_probs=107.2
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC--------------C---
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP--------------D--- 402 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------------~--- 402 (481)
.+.|+||.||++... +|..||+|.+........+.+.+|+.++++++|+||+++++++... .
T Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (320)
T 2i6l_A 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98 (320)
T ss_dssp CC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEE
T ss_pred eccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCcee
Confidence 468999999999865 4889999998776656667788999999999999999999876321 1
Q ss_pred --cccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC-CCCcEEEccccCcccC
Q 039957 403 --FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479 (481)
Q Consensus 403 --~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~-~~~~~kl~Dfgl~~~~ 479 (481)
++|++ |+|.+++.. ..+++.....++.++++||+||| +.+|+||||||+||+++ +++.+||+|||+++..
T Consensus 99 lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~ 171 (320)
T 2i6l_A 99 IVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171 (320)
T ss_dssp EEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC
T ss_pred EEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCeEEEccCcccccc
Confidence 46776 699988864 34778889999999999999999 57899999999999997 5689999999999865
No 319
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.78 E-value=3e-19 Score=172.17 Aligned_cols=134 Identities=29% Similarity=0.436 Sum_probs=111.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..||+|.+..... ...+.+.+|+.++.+++|+||++++++|...+ ++|++++++.
T Consensus 33 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~ 112 (331)
T 4aaa_A 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112 (331)
T ss_dssp GGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred EeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHH
Confidence 478999999999865 588999998865432 22345778999999999999999999987665 5788988888
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
++... ...+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 113 ~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 174 (331)
T 4aaa_A 113 DLELF-PNGLDYQVVQKYLFQIINGIGFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174 (331)
T ss_dssp HHHHS-TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred HHHhh-ccCCCHHHHHHHHHHHHHHHHHHH----HCCEEccCcChheEEEcCCCcEEEEeCCCceee
Confidence 77553 345788999999999999999999 578999999999999999999999999999754
No 320
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.78 E-value=4.6e-19 Score=172.96 Aligned_cols=133 Identities=26% Similarity=0.360 Sum_probs=111.4
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhc-----cCccceeecccCCCC-----cccccCC
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-----HQNLIKILSSCSTPD-----FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~-----~~~~~~g 409 (481)
.+.|+||.||++.. .+|..||+|.+... ....+.+..|+.++.+++ |+||+++++++...+ ++|+ +|
T Consensus 43 lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~ 120 (360)
T 3llt_A 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GP 120 (360)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CC
T ss_pred EcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CC
Confidence 37899999999986 46889999998643 233345677888888886 999999999887665 5678 89
Q ss_pred ChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC------------------------
Q 039957 410 SLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE------------------------ 464 (481)
Q Consensus 410 ~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~------------------------ 464 (481)
+|.+++.... ..+++.....++.+|++||+||| +.+||||||||+|||+++
T Consensus 121 ~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (360)
T 3llt_A 121 SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR----KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196 (360)
T ss_dssp BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEE
T ss_pred CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCcccEEEccccccccccchhccccccccccccc
Confidence 9999987643 34788899999999999999999 678999999999999986
Q ss_pred -CCcEEEccccCcccC
Q 039957 465 -NMVAHVSDFGISKLL 479 (481)
Q Consensus 465 -~~~~kl~Dfgl~~~~ 479 (481)
++.+||+|||+|+..
T Consensus 197 ~~~~~kl~DFG~a~~~ 212 (360)
T 3llt_A 197 KSTGIKLIDFGCATFK 212 (360)
T ss_dssp SCCCEEECCCTTCEET
T ss_pred CCCCEEEEeccCceec
Confidence 789999999999754
No 321
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.78 E-value=1.9e-19 Score=175.91 Aligned_cols=132 Identities=25% Similarity=0.365 Sum_probs=97.3
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------cccc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----------~~~~ 406 (481)
.+.|+||.||+|.. .+|..||+|++.... ......+.+|+.++++++|+||+++++++.... ++|+
T Consensus 37 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~ 116 (367)
T 2fst_X 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 116 (367)
T ss_dssp CC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC
T ss_pred EeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc
Confidence 47899999999974 468999999986432 233456778999999999999999999886531 2344
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++|.+++.. ..+++..+..++.+|++||+||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 117 -~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 117 -GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp -CEECC-------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred -CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 6888887754 35788999999999999999999 578999999999999999999999999999764
No 322
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.78 E-value=5e-19 Score=170.52 Aligned_cols=128 Identities=22% Similarity=0.427 Sum_probs=110.0
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhc-cCccceeecccCCCC-------cccccCCCh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-HQNLIKILSSCSTPD-------FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-------~~~~~~g~l 411 (481)
.+.|+||.||++.. .+|..||+|.+.... .+.+.+|+.++.+++ |+||+++++++.... ++|++++++
T Consensus 44 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l 120 (330)
T 3nsz_A 44 LGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF 120 (330)
T ss_dssp EEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCH
T ss_pred ecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhH
Confidence 47899999999974 568999999986432 346788999999997 999999999887632 678999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC-cEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM-VAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~-~~kl~Dfgl~~~~ 479 (481)
.+++.. ++..++..++.++++||+||| +.+|+||||||+|||++.++ .+||+|||+|+..
T Consensus 121 ~~~~~~----~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 121 KQLYQT----LTDYDIRFYMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp HHHGGG----CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred HHHHHh----CCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 988753 677888999999999999999 57899999999999999776 8999999999764
No 323
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.78 E-value=3.2e-19 Score=181.19 Aligned_cols=135 Identities=26% Similarity=0.416 Sum_probs=114.4
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
..+.|+||.||++... +|..||+|.+.... ......+.+|+.++++++||||+++++++.... ++|+++|+|
T Consensus 29 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 108 (486)
T 3mwu_A 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108 (486)
T ss_dssp EEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcH
Confidence 3478999999999854 68899999986532 223456788999999999999999999998765 578999999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC---CCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD---ENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~---~~~~~kl~Dfgl~~~~ 479 (481)
.+.+... ..+++..+..++.+|++||+||| +.+||||||||+|||++ .++.+||+|||+|+.+
T Consensus 109 ~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 109 FDEIIKR-KRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp HHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9887653 35788899999999999999999 57899999999999995 4678999999999865
No 324
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.78 E-value=2.2e-19 Score=171.36 Aligned_cols=134 Identities=22% Similarity=0.282 Sum_probs=112.3
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... ++..||+|.+..... ...+.+.+|+.++.+++|+||+++++++...+ +||+++++|
T Consensus 42 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 121 (309)
T 2h34_A 42 VGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDL 121 (309)
T ss_dssp EEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEH
T ss_pred EcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCH
Confidence 478999999999864 688999999865432 22356888999999999999999999987654 578899999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++.++..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 122 AAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH----AAGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp HHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9988753 35788999999999999999999 578999999999999999999999999998754
No 325
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.78 E-value=4.7e-19 Score=174.37 Aligned_cols=130 Identities=26% Similarity=0.367 Sum_probs=106.2
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC------------------
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP------------------ 401 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------------------ 401 (481)
.+.|+||.||++.. .+|..||+|++.... ....+|++++++++|+||+++++++...
T Consensus 15 lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (383)
T 3eb0_A 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLG 90 (383)
T ss_dssp EECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------------------
T ss_pred EEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccc
Confidence 47899999999975 578999999886432 2345799999999999999999987321
Q ss_pred -------------------------CcccccCCChhHHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeC
Q 039957 402 -------------------------DFKFMPNGSLEKRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453 (481)
Q Consensus 402 -------------------------~~~~~~~g~l~~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~ 453 (481)
.+||++ |+|.+.+.. ....+++.....++.++++||+||| +.+|+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~gi~H~ 165 (383)
T 3eb0_A 91 GKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH----SLGICHR 165 (383)
T ss_dssp -------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECS
T ss_pred ccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCcCccC
Confidence 146777 577766653 4456888999999999999999999 6789999
Q ss_pred CCCCCCeeeC-CCCcEEEccccCcccC
Q 039957 454 DLKPTSILLD-ENMVAHVSDFGISKLL 479 (481)
Q Consensus 454 dlk~~nill~-~~~~~kl~Dfgl~~~~ 479 (481)
||||+||+++ +++.+||+|||+|+.+
T Consensus 166 Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 192 (383)
T 3eb0_A 166 DIKPQNLLVNSKDNTLKLCDFGSAKKL 192 (383)
T ss_dssp CCCGGGEEEETTTTEEEECCCTTCEEC
T ss_pred ccCHHHEEEcCCCCcEEEEECCCCccc
Confidence 9999999998 6899999999999864
No 326
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.78 E-value=2e-19 Score=174.50 Aligned_cols=134 Identities=18% Similarity=0.197 Sum_probs=104.8
Q ss_pred hhccccccceeeeecc----CCcceEEEEEeccchh-----------hhhhhhHHHHHhhhhccCccceeecccCC----
Q 039957 340 ISLAGSFGSVYKGTIS----DGTDVAIKIFNLQRER-----------AFRSFNSECEVLRNVRHQNLIKILSSCST---- 400 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~----~g~~vavK~l~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~---- 400 (481)
..++|+||.||+|... .+..+|+|........ ....+.+|+..+..++|+||+++++++..
T Consensus 44 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~ 123 (345)
T 2v62_A 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKG 123 (345)
T ss_dssp EC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSS
T ss_pred eEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCC
Confidence 3468999999999865 5678999988654321 11235567788889999999999998865
Q ss_pred CC-----cccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC--cEEEccc
Q 039957 401 PD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM--VAHVSDF 473 (481)
Q Consensus 401 ~~-----~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~--~~kl~Df 473 (481)
.. +||+ +|+|.+++.... .+++.++.+|+.+|++||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 124 ~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kL~Df 197 (345)
T 2v62_A 124 RSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH----ENEYVHGDIKAANLLLGYKNPDQVYLADY 197 (345)
T ss_dssp CEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEESSSTTSEEECCC
T ss_pred CcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCcCHHHEEEccCCCCcEEEEeC
Confidence 22 5788 999999987544 6889999999999999999999 57899999999999999877 9999999
Q ss_pred cCcccC
Q 039957 474 GISKLL 479 (481)
Q Consensus 474 gl~~~~ 479 (481)
|+|+.+
T Consensus 198 g~a~~~ 203 (345)
T 2v62_A 198 GLSYRY 203 (345)
T ss_dssp TTCEES
T ss_pred CCceec
Confidence 999754
No 327
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.78 E-value=5.2e-19 Score=170.16 Aligned_cols=135 Identities=21% Similarity=0.319 Sum_probs=114.3
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch--hhhhhhhHHHHHhhhhc-cCccceeecccCCCC-----cccccCCCh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVR-HQNLIKILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-----~~~~~~g~l 411 (481)
.+.|+||.||++... +|..||+|.+..... .....+.+|+.++.+++ |+||+++++++.... +||+++|+|
T Consensus 37 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L 116 (327)
T 3lm5_A 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI 116 (327)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred eCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcH
Confidence 478999999999854 689999999875432 22456788999999885 699999999987765 678999999
Q ss_pred hHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCcccC
Q 039957 412 EKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~~ 479 (481)
.+++... ...+++.++..++.++++||+||| +.+|+||||||+||+++. ++.+||+|||+|+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH----~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~ 184 (327)
T 3lm5_A 117 FSLCLPELAEMVSENDVIRLIKQILEGVYYLH----QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184 (327)
T ss_dssp GGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence 9987643 356889999999999999999999 578999999999999998 789999999999764
No 328
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.78 E-value=4.8e-19 Score=180.65 Aligned_cols=135 Identities=26% Similarity=0.429 Sum_probs=111.7
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccch-------------hhhhhhhHHHHHhhhhccCccceeecccCCCC---
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-------------RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD--- 402 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 402 (481)
..+.|+||.||++... ++..+|+|.+..... ...+.+.+|+.++++++||||++++++|....
T Consensus 43 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 122 (504)
T 3q5i_A 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY 122 (504)
T ss_dssp EEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred EecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 3478999999999865 578899999865431 22356788999999999999999999998765
Q ss_pred --cccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC---cEEEccccCcc
Q 039957 403 --FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM---VAHVSDFGISK 477 (481)
Q Consensus 403 --~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~---~~kl~Dfgl~~ 477 (481)
+||+++|+|.+++... ..+++..+..|+.+|+.||+||| +.+|+||||||+|||++.++ .+||+|||+|+
T Consensus 123 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 197 (504)
T 3q5i_A 123 LVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH----KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197 (504)
T ss_dssp EEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESSTTCCSSEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCcHHHEEEecCCCCccEEEEECCCCE
Confidence 6789999999988653 35788999999999999999999 57899999999999998765 79999999997
Q ss_pred cC
Q 039957 478 LL 479 (481)
Q Consensus 478 ~~ 479 (481)
.+
T Consensus 198 ~~ 199 (504)
T 3q5i_A 198 FF 199 (504)
T ss_dssp EC
T ss_pred Ec
Confidence 65
No 329
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=171.88 Aligned_cols=133 Identities=27% Similarity=0.528 Sum_probs=111.0
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
..+.|+||.||+|... ..+++|.+.... ....+.+.+|+.++.+++|+||+++++++...+ ++|+++|+|.
T Consensus 40 ~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~ 117 (319)
T 2y4i_B 40 LIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY 117 (319)
T ss_dssp BCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHH
T ss_pred EeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHH
Confidence 3478999999999864 359999886543 233456788999999999999999999988765 5789999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++......+++..+.+++.++++||+||| +.+|+||||||+||+++ ++.+||+|||+++..
T Consensus 118 ~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp HHTTSSCCCCCSHHHHHHHHHHHHHHHHHH----HTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999876667888999999999999999999 57899999999999998 689999999997654
No 330
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=175.81 Aligned_cols=130 Identities=13% Similarity=0.203 Sum_probs=106.9
Q ss_pred hhccccccceeeeecc---------CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCcccee---------------e
Q 039957 340 ISLAGSFGSVYKGTIS---------DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI---------------L 395 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~---------~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l---------------~ 395 (481)
..+.|+||.||+|... ++..||+|.+... +.+.+|+.++.+++|+|++++ +
T Consensus 49 ~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~ 123 (352)
T 2jii_A 49 FQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCM 123 (352)
T ss_dssp EEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCC
T ss_pred EecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchh
Confidence 3478999999999865 3789999998643 467889999999999999984 3
Q ss_pred cccCC-CC-----cccccCCChhHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC--
Q 039957 396 SSCST-PD-----FKFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM-- 466 (481)
Q Consensus 396 ~~~~~-~~-----~~~~~~g~l~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~-- 466 (481)
+++.. .. +||+ +|+|.+++... ...+++..+.+|+.+|++||+||| +.+|+||||||+||++++++
T Consensus 124 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIl~~~~~~~ 198 (352)
T 2jii_A 124 GFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH----ENEYVHGNVTAENIFVDPEDQS 198 (352)
T ss_dssp EEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCGGGEEEETTEEE
T ss_pred hccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEEcCCCCc
Confidence 34332 22 5788 99999998764 356889999999999999999999 57899999999999999998
Q ss_pred cEEEccccCcccC
Q 039957 467 VAHVSDFGISKLL 479 (481)
Q Consensus 467 ~~kl~Dfgl~~~~ 479 (481)
.+||+|||+|+.+
T Consensus 199 ~~kl~Dfg~a~~~ 211 (352)
T 2jii_A 199 QVTLAGYGFAFRY 211 (352)
T ss_dssp EEEECCGGGCBCS
T ss_pred eEEEecCcceeec
Confidence 9999999999764
No 331
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.78 E-value=5.5e-19 Score=172.68 Aligned_cols=132 Identities=27% Similarity=0.381 Sum_probs=110.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----------cccccC
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------FKFMPN 408 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~~~~~ 408 (481)
.+.|+||.||++... ++..||+|.+.... ......+.+|+.++.+++|+||+++++++.... ++|+.
T Consensus 35 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~- 113 (364)
T 3qyz_A 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME- 113 (364)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-
T ss_pred eecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-
Confidence 478999999999754 67889999987533 233456788999999999999999999886543 34555
Q ss_pred CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 409 GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++... .+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 114 ~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 114 TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 6898887653 4788899999999999999999 578999999999999999999999999999764
No 332
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.78 E-value=3.3e-19 Score=172.51 Aligned_cols=135 Identities=22% Similarity=0.289 Sum_probs=109.3
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch-hhhhhhhHHHHH-hhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE-RAFRSFNSECEV-LRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++.. .+|..||||.+..... .....+..|... ++.++|+||+++++++...+ +||++ |+|.
T Consensus 59 lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~ 137 (340)
T 3an0_A 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLD 137 (340)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS-EEHH
T ss_pred ecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh-CcHH
Confidence 36899999999985 5789999999865432 223344455554 77789999999999987764 56776 4888
Q ss_pred HHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++.. ....+++..+..++.+|++||+|||. ..+|+||||||+||+++.++.+||+|||+++.+
T Consensus 138 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 138 KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp HHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 87753 45578899999999999999999994 138999999999999999999999999998754
No 333
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.78 E-value=7e-19 Score=171.15 Aligned_cols=133 Identities=24% Similarity=0.374 Sum_probs=111.5
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----------ccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------FKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~~~~ 407 (481)
..+.|+||.||+|... +|..||+|.+.... ......+.+|+.++++++|+||+++++++.... ++|+.
T Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~ 97 (353)
T 2b9h_A 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ 97 (353)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS
T ss_pred EEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC
Confidence 3478999999999864 68899999986533 233456778999999999999999999876542 45665
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++... .+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 98 -~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 98 -TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp -EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred -ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 6888887653 5788899999999999999999 578999999999999999999999999999764
No 334
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.78 E-value=2.2e-19 Score=172.95 Aligned_cols=133 Identities=26% Similarity=0.424 Sum_probs=107.5
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++.. .+|..||+|.+..... .....+.+|+.++++++|+||+++++++.... +||++ |+|.
T Consensus 42 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~ 120 (329)
T 3gbz_A 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLK 120 (329)
T ss_dssp EEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred EEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHH
Confidence 37899999999974 4688999999865432 23456778999999999999999999987765 56777 5999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee-----CCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL-----DENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill-----~~~~~~kl~Dfgl~~~~ 479 (481)
+++.... .+++..+..|+.+|++||+||| +.+|+||||||+|||+ ++++.+||+|||+|+.+
T Consensus 121 ~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 121 KYMDKNP-DVSMRVIKSFLYQLINGVNFCH----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp HHHHHCT-TCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred HHHhhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 8887543 4788899999999999999999 5789999999999999 45667999999998653
No 335
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.78 E-value=3.8e-19 Score=168.49 Aligned_cols=134 Identities=26% Similarity=0.410 Sum_probs=110.9
Q ss_pred hhhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC-C-----cccccCCCh
Q 039957 339 TISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP-D-----FKFMPNGSL 411 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~-----~~~~~~g~l 411 (481)
..-++|+||.||++.. .+|..||+|...... ....+..|+.++.+++|++++..++.|... + ++|+ +|+|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 3447899999999985 568899999865432 234578899999999999888777766432 2 5688 9999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
.+++......+++..+..++.++++||+||| +.+|+||||||+||++ ++++.+||+|||+|+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 92 EDLFNFCSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9998865667899999999999999999999 5789999999999999 78899999999999754
No 336
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.77 E-value=5.7e-20 Score=174.75 Aligned_cols=135 Identities=27% Similarity=0.438 Sum_probs=100.6
Q ss_pred hhhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhh--hccCccceeecccCCCC---------ccccc
Q 039957 339 TISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRN--VRHQNLIKILSSCSTPD---------FKFMP 407 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---------~~~~~ 407 (481)
...+.|+||.||+|.. +|..||||.+.... ...+..|.+++.. ++|+||+++++++.... ++|++
T Consensus 9 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEECSSSEEEEC-C-TTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhccCCCCeEEEEEEE-cCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 3447899999999986 48899999986432 2345567777766 79999999999876543 56899
Q ss_pred CCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC----CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++... .+++..+.+++.++++|++|||... .+.+|+||||||+||++++++.+||+|||+|+..
T Consensus 85 ~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~ 158 (303)
T 3gxj_A 85 HGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCE
T ss_pred CCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceec
Confidence 99999998654 4667788899999999999999310 1368999999999999999999999999998654
No 337
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.77 E-value=7.2e-19 Score=170.21 Aligned_cols=133 Identities=27% Similarity=0.449 Sum_probs=110.7
Q ss_pred hccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhh--hccCccceeecccCCCC---------cccccCC
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRN--VRHQNLIKILSSCSTPD---------FKFMPNG 409 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---------~~~~~~g 409 (481)
.+.|+||.||++.. +|..||+|.+.... ...+..|.+++.. ++|+||+++++++.... ++|+++|
T Consensus 50 lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g 125 (342)
T 1b6c_B 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 125 (342)
T ss_dssp EEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTC
T ss_pred ecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCC
Confidence 47899999999987 58899999986432 3456678887776 78999999999886653 5688999
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC----CCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|.+++... .+++.++.+++.++++|++|||... .+.+|+||||||+||++++++.+||+|||+++..
T Consensus 126 ~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 197 (342)
T 1b6c_B 126 SLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197 (342)
T ss_dssp BHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEE
T ss_pred cHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceec
Confidence 999998753 4788999999999999999999320 0367999999999999999999999999998653
No 338
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=6.8e-20 Score=194.24 Aligned_cols=223 Identities=21% Similarity=0.162 Sum_probs=88.0
Q ss_pred cCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEE
Q 039957 37 STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLS 116 (481)
Q Consensus 37 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 116 (481)
++++.|+|.+|.+.. .|.. .|+.++|++|.|.+ ++++.|.+. ..|+.|..++.|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~------~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA------LLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCc-chhh------HhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEE
Confidence 446667776766652 3322 23444455544432 233344444 4566666666666666
Q ss_pred cccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecCCcccccCCCCCeE
Q 039957 117 LLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYL 196 (481)
Q Consensus 117 L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 196 (481)
|++|.+..++. .+.++++|++|+|++|.|+ .+|..++.+ ++|+.|+|++|+|+ .+|..|+.+++|++|
T Consensus 231 Ls~n~l~~l~~---------~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l-~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 231 LSNLQIFNISA---------NIFKYDFLTRLYLNGNSLT-ELPAEIKNL-SNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CTTSCCSCCCG---------GGGGCCSCSCCBCTTSCCS-CCCGGGGGG-TTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCCCCCCCh---------hhcCCCCCCEEEeeCCcCc-ccChhhhCC-CCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 66666665432 2234566666667776666 566666655 46777777777766 556666667777777
Q ss_pred ecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccC-CCeeecCCCeeeecCCcccccCCCCCcEEcCCC--
Q 039957 197 SLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEM-LNLLHLGGNKLSGHIPPCLASLTSLRELDLGSN-- 273 (481)
Q Consensus 197 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N-- 273 (481)
+|++|.|+ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..++|++|.+++.+|.. |+.|+++.|
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~ 371 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGE 371 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccc
Confidence 77777665 55666667777777777777776666665544322 123566667666666543 344555554
Q ss_pred ------cCcccCCcchhccccCcEEEccCcccC
Q 039957 274 ------KLTSSIPSSLWSLGYILEINLSSNLLN 300 (481)
Q Consensus 274 ------~l~~~~p~~~~~l~~L~~L~l~~N~l~ 300 (481)
.+.+..+..+..+..+....++.|.+.
T Consensus 372 ~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 372 PQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------------------CCC
T ss_pred cccccCCccccccchhhcccccceeeeeccccc
Confidence 233333333334444444555555553
No 339
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.77 E-value=6.3e-19 Score=167.36 Aligned_cols=133 Identities=23% Similarity=0.355 Sum_probs=111.0
Q ss_pred hhhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHh-hhhccCccceeecccCC----CC-----ccccc
Q 039957 339 TISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVL-RNVRHQNLIKILSSCST----PD-----FKFMP 407 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~-----~~~~~ 407 (481)
.+.+.|+||.||++.. .+|..||+|.+... ..+.+|+.++ +..+|+||+++++++.. .. ++|++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 3457899999999985 46889999998532 3456788877 55689999999998764 21 67899
Q ss_pred CCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCcccCC
Q 039957 408 NGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLLG 480 (481)
Q Consensus 408 ~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~~~ 480 (481)
+|+|.+++.... ..+++..+..++.+++.||+||| +.+|+||||||+||+++. ++.+||+|||+|+...
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999987643 46889999999999999999999 578999999999999998 7899999999997653
No 340
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.77 E-value=4.5e-19 Score=176.54 Aligned_cols=131 Identities=29% Similarity=0.450 Sum_probs=105.3
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC-----------Cccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP-----------DFKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----------~~~~~~ 407 (481)
..+.|+||.||+|... +|..||||.+.... ....+|++++++++|+|||+++++|... .++|++
T Consensus 61 ~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~ 136 (420)
T 1j1b_A 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136 (420)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC
T ss_pred EEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc
Confidence 3478999999999875 58999999885432 2345799999999999999999887421 145776
Q ss_pred CCChhHHhh---cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC-CcEEEccccCcccC
Q 039957 408 NGSLEKRLY---SHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN-MVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~---~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~-~~~kl~Dfgl~~~~ 479 (481)
+ ++.+.+. .....+++.....++.+|++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 137 ~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 137 E-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp E-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred c-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 4 5555443 23456888899999999999999999 6889999999999999965 67899999999864
No 341
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.77 E-value=4.6e-19 Score=167.44 Aligned_cols=134 Identities=24% Similarity=0.258 Sum_probs=102.1
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchh--hhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRER--AFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
-+.|+||.||++.. .+|..||+|.+...... ..+.+..+...++.++||||+++++++...+ +||++ |++.
T Consensus 15 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~ 93 (290)
T 3fme_A 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLD 93 (290)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHH
T ss_pred cCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchH
Confidence 36899999999985 57899999998654321 2223344445578889999999999987764 56776 5887
Q ss_pred HHhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCC-CeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYS---HNYFLDILERLNIMIDVGSTLEYLHHGHSSA-PIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~---~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~-~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++.. ....+++..+.+++.++++|++||| +. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 94 KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH----SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 76643 4556889999999999999999999 44 8999999999999999999999999998764
No 342
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.77 E-value=4.1e-19 Score=176.12 Aligned_cols=132 Identities=25% Similarity=0.363 Sum_probs=100.8
Q ss_pred hccccccceeeeecc---CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCC--CC-----cccccCCC
Q 039957 341 SLAGSFGSVYKGTIS---DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--PD-----FKFMPNGS 410 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~---~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~-----~~~~~~g~ 410 (481)
.+.|+||.||+|... ++..||+|.+.... ....+.+|+.++++++|+||+++++++.. .. ++|+. |+
T Consensus 29 lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~ 105 (405)
T 3rgf_A 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HD 105 (405)
T ss_dssp CC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EE
T ss_pred eeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CC
Confidence 478999999999854 47889999886432 23457789999999999999999998843 22 56765 57
Q ss_pred hhHHhhc--------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee----CCCCcEEEccccCccc
Q 039957 411 LEKRLYS--------HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL----DENMVAHVSDFGISKL 478 (481)
Q Consensus 411 l~~~l~~--------~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill----~~~~~~kl~Dfgl~~~ 478 (481)
+.+.+.. ....+++..+..|+.+|+.||+||| +.+|+||||||+|||+ +.++.+||+|||+|+.
T Consensus 106 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 106 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp HHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 7776642 1224788899999999999999999 5789999999999999 6789999999999976
Q ss_pred C
Q 039957 479 L 479 (481)
Q Consensus 479 ~ 479 (481)
+
T Consensus 182 ~ 182 (405)
T 3rgf_A 182 F 182 (405)
T ss_dssp -
T ss_pred c
Confidence 4
No 343
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.77 E-value=5.2e-19 Score=167.58 Aligned_cols=133 Identities=26% Similarity=0.418 Sum_probs=111.4
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC-C-----cccccCCChh
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP-D-----FKFMPNGSLE 412 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~-----~~~~~~g~l~ 412 (481)
..+.|+||.||+|.. .+|..||+|.+..... .+.+..|+.++.+++|++++..+.++... . ++|+ +|+|.
T Consensus 16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 92 (296)
T 3uzp_A 16 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLE 92 (296)
T ss_dssp EEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHH
Confidence 347899999999985 5789999998765432 34678899999999999888777666432 2 5688 89999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
+++......+++..+.+++.++++||+||| +.+|+||||||+||++ ++++.+||+|||+|+..
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 93 DLFNFCSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 998765567899999999999999999999 5789999999999999 47899999999999764
No 344
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.77 E-value=9e-19 Score=171.54 Aligned_cols=131 Identities=24% Similarity=0.319 Sum_probs=106.6
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------cccc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------FKFM 406 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----------~~~~ 406 (481)
.+.|+||.||++.. .+|..||+|.+.... ......+.+|+.++++++||||+++++++.... +||+
T Consensus 33 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~ 112 (371)
T 2xrw_A 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112 (371)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECC
T ss_pred eEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcC
Confidence 47899999999975 468899999986532 233456788999999999999999999886542 4567
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+ |++.+.+.. .+++.....++.+|++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 113 ~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 113 D-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp S-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred C-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 6 578777753 3778889999999999999999 578999999999999999999999999999764
No 345
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.77 E-value=4.4e-19 Score=168.38 Aligned_cols=132 Identities=26% Similarity=0.441 Sum_probs=109.4
Q ss_pred ccccccceeeeecc-CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChhH
Q 039957 342 LAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 342 ~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
+.|+||.||++... +|..||+|.+..... .....+.+|+.++++++|+||+++++++...+ +||++ |+|.+
T Consensus 12 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~ 90 (299)
T 2r3i_A 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKK 90 (299)
T ss_dssp EECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred ccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHH
Confidence 67999999999865 689999998865432 23356788999999999999999999987665 56776 69988
Q ss_pred HhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 414 RLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 414 ~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
++.... ..+++..+.+++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 91 FMDASALTGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred HHHhhhccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHeEEcCCCCEEECcchhhhh
Confidence 876543 45788899999999999999999 57899999999999999999999999999864
No 346
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=166.07 Aligned_cols=135 Identities=25% Similarity=0.390 Sum_probs=111.2
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccch----hhhhhhhHHHHHhhhhccCccceeecccCCCC-------ccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE----RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------~~~~~ 407 (481)
..+.|+||.||++... ++..+|+|.+..... .....+.+|++++++++|+||+++++++...+ +||++
T Consensus 12 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (305)
T 2wtk_C 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCV 91 (305)
T ss_dssp EEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCS
T ss_pred EEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhcc
Confidence 3478999999999864 578999999875432 23456888999999999999999999884322 56787
Q ss_pred CCChhHHhhc-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYS-HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~-~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+| +.+.+.. ....+++..+.+++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 92 CG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 66 6665554 3446788999999999999999999 578999999999999999999999999999764
No 347
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.76 E-value=1e-18 Score=171.09 Aligned_cols=132 Identities=26% Similarity=0.383 Sum_probs=108.2
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------ccc
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------FKF 405 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----------~~~ 405 (481)
..+.|+||.||+|.. .+|..||+|.+.... ......+.+|+.++++++|+||+++++++...+ ++|
T Consensus 49 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~ 128 (371)
T 4exu_A 49 HVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPF 128 (371)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEEC
T ss_pred EEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcc
Confidence 347899999999975 468999999986532 233456788999999999999999999886543 245
Q ss_pred ccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 406 MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 406 ~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+. |++.+.+.. .+++..+..++.++++||+||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 129 ~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 129 MQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred cc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 55 677776642 3788999999999999999999 578999999999999999999999999999754
No 348
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2.3e-18 Score=152.88 Aligned_cols=151 Identities=17% Similarity=0.201 Sum_probs=98.5
Q ss_pred CccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecC
Q 039957 168 SLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLG 247 (481)
Q Consensus 168 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~ 247 (481)
+|+.|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|+.|++++|.+++..|..++.+++|+.|+++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4555555555555 344 4556666666666666543 23356666666777777766666666667777777777777
Q ss_pred CCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeee
Q 039957 248 GNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSG 325 (481)
Q Consensus 248 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 325 (481)
+|++++..|..+..+++|++|++++|++.+.+| .+..++.|+.|++++|.+++. + .+..+++|+.|++++|++.+
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC----
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 777776666777777777777777777223444 567777777777777777653 3 57778888888888888753
No 349
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.76 E-value=9.7e-19 Score=168.17 Aligned_cols=134 Identities=27% Similarity=0.395 Sum_probs=112.5
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCC------C-----ccccc
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTP------D-----FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~-----~~~~~ 407 (481)
.+.|+||.||+|.. .+|..||+|.+.... .....+.+|+.++.++ +|+||+++++++... + +||++
T Consensus 32 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~ 110 (326)
T 2x7f_A 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG 110 (326)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCT
T ss_pred eccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCC
Confidence 46899999999986 468899999986543 2345678899999998 799999999988542 1 57899
Q ss_pred CCChhHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++... ...+++.....++.++++||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 111 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 111 AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp TEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred CCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 99999998753 245788889999999999999999 578999999999999999999999999998764
No 350
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.6e-18 Score=153.14 Aligned_cols=133 Identities=26% Similarity=0.279 Sum_probs=101.2
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeeccc
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGF 95 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 95 (481)
+++++++|+++. +|..+.. +|++|++++|++++..+..++..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 678888888864 4554433 7888888888887544443334688888888888888888788888888888888888
Q ss_pred CcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCC
Q 039957 96 NTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP 159 (481)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 159 (481)
|++++..|..|.++++|++|+|++|+++++.+ ..+..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMP--------GSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECT--------TSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCH--------HHhhcCCCCCEEEeCCCCccCcCc
Confidence 88888888888888888888888888887643 335667788888888888876544
No 351
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.76 E-value=1.2e-18 Score=169.53 Aligned_cols=132 Identities=26% Similarity=0.383 Sum_probs=109.3
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccc--hhhhhhhhHHHHHhhhhccCccceeecccCCCC-----------ccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------FKF 405 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----------~~~ 405 (481)
..+.|+||.||+|... +|..||+|.+.... ......+.+|+.++++++|+||+++++++.... ++|
T Consensus 31 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~ 110 (353)
T 3coi_A 31 HVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPF 110 (353)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEEC
T ss_pred eEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecc
Confidence 3478999999999854 68999999986532 223456788999999999999999999886643 345
Q ss_pred ccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 406 MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 406 ~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+. |++.+++.. .+++..+..++.+|++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 111 ~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 111 MQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred cc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 55 677776642 4788899999999999999999 578999999999999999999999999999764
No 352
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.76 E-value=6.3e-19 Score=168.40 Aligned_cols=135 Identities=27% Similarity=0.352 Sum_probs=109.5
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccch------hhhhhhhHHHHHhhhh----ccCccceeecccCCCC-----c
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRE------RAFRSFNSECEVLRNV----RHQNLIKILSSCSTPD-----F 403 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~~~~~~~~-----~ 403 (481)
..+.|+||.||++.. .+|..||+|.+..... .....+..|+.++.++ +|+||+++++++...+ +
T Consensus 38 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~ 117 (312)
T 2iwi_A 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVL 117 (312)
T ss_dssp EEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEE
T ss_pred EEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEE
Confidence 347899999999975 4688999999865432 2234567799999998 8999999999987654 4
Q ss_pred cc-ccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC-CCCcEEEccccCcccC
Q 039957 404 KF-MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479 (481)
Q Consensus 404 ~~-~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~-~~~~~kl~Dfgl~~~~ 479 (481)
+| +++++|.+++... ..+++..+.+++.++++||+||| +.+|+||||||+||+++ +++.+||+|||+++..
T Consensus 118 e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~ 190 (312)
T 2iwi_A 118 ERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCH----SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190 (312)
T ss_dssp ECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HHTEECCCCSGGGEEEETTTTEEEECCCSSCEEC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChhhEEEeCCCCeEEEEEcchhhhc
Confidence 55 7889999998753 35788999999999999999999 57899999999999999 7899999999998765
No 353
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.76 E-value=1.4e-18 Score=166.97 Aligned_cols=134 Identities=26% Similarity=0.423 Sum_probs=109.4
Q ss_pred hccccccceeeeec--cCCcceEEEEEeccch--hhhhhhhHHHHHhhhh---ccCccceeecccC-----CCC-----c
Q 039957 341 SLAGSFGSVYKGTI--SDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNV---RHQNLIKILSSCS-----TPD-----F 403 (481)
Q Consensus 341 ~~~g~~g~vy~~~l--~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~~~-----~ 403 (481)
.+.|+||.||++.. .+|..||+|.+..... .....+.+|+++++++ +||||++++++|. ... +
T Consensus 19 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 98 (326)
T 1blx_A 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98 (326)
T ss_dssp EEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEE
T ss_pred ecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEE
Confidence 37899999999986 4678899998865432 2234566788777766 8999999999886 211 5
Q ss_pred ccccCCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 404 KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 404 ~~~~~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+|++ |+|.+++.... ..+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 99 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 170 (326)
T 1blx_A 99 EHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 170 (326)
T ss_dssp ECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred ecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence 6777 79999887533 34788999999999999999999 578999999999999999999999999999764
No 354
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.76 E-value=5.7e-19 Score=186.58 Aligned_cols=133 Identities=23% Similarity=0.362 Sum_probs=109.6
Q ss_pred hhccccccceeeeecc--CCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCCCC----------cccc
Q 039957 340 ISLAGSFGSVYKGTIS--DGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD----------FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~--~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~~~ 406 (481)
..+.|+||.||++... +|..|+||.+.... ......+..|+.++.+++||||++++++|...+ +||+
T Consensus 87 ~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~ 166 (681)
T 2pzi_A 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYV 166 (681)
T ss_dssp EEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECC
T ss_pred EEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeC
Confidence 3478999999999864 58899999876432 233456788999999999999999999886432 5789
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
++++|.+++.. .++|.++.+|+.+|++||+|+| +.+||||||||+|||++++ .+||+|||+++...
T Consensus 167 ~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH----~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 167 GGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH----SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp CCEECC----C---CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred CCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH----HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999887654 5889999999999999999999 5789999999999999986 99999999998653
No 355
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.76 E-value=1e-18 Score=164.71 Aligned_cols=131 Identities=11% Similarity=0.068 Sum_probs=110.3
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccch---hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCC
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGS 410 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~ 410 (481)
..+.|+||.||++... +|..||+|.+..... ...+.+.+|+..+.+++|+||+++++++...+ +||+++++
T Consensus 38 ~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~ 117 (286)
T 3uqc_A 38 FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGS 117 (286)
T ss_dssp EEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEE
T ss_pred EEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCC
Confidence 4478999999999865 489999999875432 23467888999999999999999999987664 67899999
Q ss_pred hhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 411 l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
|.+++... ....+..+|+.++++||+||| +.+|+||||||+|||+++++.+||+++|...
T Consensus 118 L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH----~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 118 LQEVADTS---PSPVGAIRAMQSLAAAADAAH----RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp HHHHHTTC---CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred HHHHHhcC---CChHHHHHHHHHHHHHHHHHH----HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 99998543 244567889999999999999 5789999999999999999999999887653
No 356
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.76 E-value=2.4e-18 Score=162.35 Aligned_cols=134 Identities=26% Similarity=0.405 Sum_probs=113.1
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch--hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... ++..||+|.+..... .....+.+|++++++++|+||+++++++.... ++|+++++|.
T Consensus 30 lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 109 (287)
T 2wei_A 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109 (287)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred EcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHH
Confidence 368999999999865 688999999865432 23456788999999999999999999987765 5788999999
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC---CcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN---MVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~---~~~kl~Dfgl~~~~ 479 (481)
+.+... ..+++..+.+++.++++||+||| +.+|+||||||+||+++.+ +.+||+|||+++..
T Consensus 110 ~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 110 DEIIKR-KRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp HHHHHH-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred HHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 887643 35788999999999999999999 5789999999999999764 57999999998764
No 357
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.75 E-value=8.7e-19 Score=172.99 Aligned_cols=132 Identities=28% Similarity=0.435 Sum_probs=104.7
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC-----------CcccccC
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP-----------DFKFMPN 408 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----------~~~~~~~ 408 (481)
..+.|+||.||++....+..+|+|++.... ....+|++++++++|+||++++++|... .+||+++
T Consensus 47 ~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~ 122 (394)
T 4e7w_A 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE 122 (394)
T ss_dssp EEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE
T ss_pred EEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc
Confidence 447899999999998777679998875432 2234699999999999999999988432 1567776
Q ss_pred CChhHHhh--cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC-CCCcEEEccccCcccC
Q 039957 409 GSLEKRLY--SHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479 (481)
Q Consensus 409 g~l~~~l~--~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~-~~~~~kl~Dfgl~~~~ 479 (481)
+.+..... .....+++.....++.+|++||+||| +.+|+||||||+|||++ .++.+||+|||+|+.+
T Consensus 123 ~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 123 TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 54333221 23446788889999999999999999 57899999999999999 7999999999999764
No 358
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.75 E-value=1.1e-18 Score=174.59 Aligned_cols=134 Identities=29% Similarity=0.341 Sum_probs=104.7
Q ss_pred hhhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCChh
Q 039957 339 TISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
..-+.|+||.||.+...+|..||||++.... .+.+.+|++++.++ +|||||++++++.... +||+. |+|.
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 3457899999976666679999999886532 23467899999886 8999999999887765 56775 7999
Q ss_pred HHhhcCCCc------cCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-------------CCcEEEccc
Q 039957 413 KRLYSHNYF------LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-------------NMVAHVSDF 473 (481)
Q Consensus 413 ~~l~~~~~~------~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-------------~~~~kl~Df 473 (481)
+++...... ..+..+.+|+.+|++||+||| +.+||||||||+|||++. ++.+||+||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 998754321 122245679999999999999 578999999999999965 458999999
Q ss_pred cCcccCC
Q 039957 474 GISKLLG 480 (481)
Q Consensus 474 gl~~~~~ 480 (481)
|+|+.+.
T Consensus 173 G~a~~~~ 179 (434)
T 2rio_A 173 GLCKKLD 179 (434)
T ss_dssp TTCEECC
T ss_pred ccceecC
Confidence 9998653
No 359
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.75 E-value=9.1e-19 Score=174.67 Aligned_cols=132 Identities=28% Similarity=0.418 Sum_probs=105.4
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhh-ccCccceeecccCCCC-----cccccCCChhH
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPD-----FKFMPNGSLEK 413 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~~~~g~l~~ 413 (481)
..+.|+||.|+.....+|..||||++.... ...+.+|+++++++ +|||||++++++.... +||++ |+|.+
T Consensus 31 ~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~ 106 (432)
T 3p23_A 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQE 106 (432)
T ss_dssp EEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred eeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHH
Confidence 447899999655545678999999986432 23467899999998 7999999999887665 45675 69999
Q ss_pred HhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC-----CCCcEEEccccCcccC
Q 039957 414 RLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-----ENMVAHVSDFGISKLL 479 (481)
Q Consensus 414 ~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~-----~~~~~kl~Dfgl~~~~ 479 (481)
++........+.++..++.+|++||+||| +.+|+||||||+|||++ +...+||+|||+|+.+
T Consensus 107 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 107 YVEQKDFAHLGLEPITLLQQTTSGLAHLH----SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp HHHSSSCCCCSSCHHHHHHHHHHHHHHHH----HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred HHHhcCCCccchhHHHHHHHHHHHHHHHH----HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 98765544444566789999999999999 57899999999999994 3357889999999765
No 360
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.75 E-value=2.1e-18 Score=173.93 Aligned_cols=134 Identities=25% Similarity=0.341 Sum_probs=108.7
Q ss_pred hhhccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccce-eecccCCCC-----cccccCCCh
Q 039957 339 TISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIK-ILSSCSTPD-----FKFMPNGSL 411 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~-----~~~~~~g~l 411 (481)
...+.|+||.||++.. .+|..||||....... ...+..|+.++..++|.+.+. +..++...+ ++|+ +|+|
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 3447899999999985 5689999998765432 345788999999998755444 433433333 5678 9999
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee---CCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill---~~~~~~kl~Dfgl~~~~ 479 (481)
.+++......+++..+..|+.+|++||+||| +.+||||||||+|||+ +.++.+||+|||+|+.+
T Consensus 90 ~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 90 EDLFNFCSRKLSLKTVLMLADQMINRVEFVH----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 9998765667899999999999999999999 5789999999999999 57899999999999864
No 361
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.75 E-value=1.9e-18 Score=165.76 Aligned_cols=136 Identities=26% Similarity=0.313 Sum_probs=112.5
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccchh------hhhhhhHHHHHhhhhc--cCccceeecccCCCC-----ccc
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQRER------AFRSFNSECEVLRNVR--HQNLIKILSSCSTPD-----FKF 405 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~-----~~~ 405 (481)
..+.|+||.||+|.. .+|..||+|.+...... ....+..|+.++.+++ |+|++++++++...+ ++|
T Consensus 50 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~ 129 (320)
T 3a99_A 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 129 (320)
T ss_dssp ECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEEC
T ss_pred EEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEc
Confidence 447899999999974 56889999998764321 2356778999999996 599999999998765 456
Q ss_pred ccC-CChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC-CCCcEEEccccCcccCC
Q 039957 406 MPN-GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLLG 480 (481)
Q Consensus 406 ~~~-g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~-~~~~~kl~Dfgl~~~~~ 480 (481)
+.. ++|.+++... ..+++..+..++.++++||+||| +.+|+||||||+||+++ +++.+||+|||+++.+.
T Consensus 130 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 130 PEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH----NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201 (320)
T ss_dssp CSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred CCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH----HCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence 654 8999988653 35788899999999999999999 57899999999999999 68999999999987653
No 362
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.75 E-value=2.6e-18 Score=171.37 Aligned_cols=134 Identities=28% Similarity=0.375 Sum_probs=109.3
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhh------ccCccceeecccCCCC-----ccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNV------RHQNLIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~-----~~~~~ 407 (481)
..+.|+||.||+|... ++..||||.+.... ...+.+..|+.++..+ .|+||+++++++.... ++|+.
T Consensus 104 ~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~ 182 (429)
T 3kvw_A 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS 182 (429)
T ss_dssp EEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC
T ss_pred EcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC
Confidence 3478999999999754 58899999986542 2334566788887776 4669999999887654 56775
Q ss_pred CCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc--EEEccccCcccC
Q 039957 408 NGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV--AHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~--~kl~Dfgl~~~~ 479 (481)
|++.+++.... ..+++..+.+|+.+|++||+||| +.+||||||||+|||++.++. +||+|||+|+..
T Consensus 183 -~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 183 -MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH----KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp -CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred -CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 78988887643 34889999999999999999999 578999999999999999887 999999998654
No 363
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.75 E-value=3.4e-18 Score=163.43 Aligned_cols=134 Identities=22% Similarity=0.336 Sum_probs=111.8
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccc--hhhhhhhhHHHHHhhhhcc--CccceeecccCCCCccc----ccCCCh
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRH--QNLIKILSSCSTPDFKF----MPNGSL 411 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~----~~~g~l 411 (481)
..+.|+||.||++...+|..+|+|.+.... ......+.+|++++.+++| +||+++++++...+.-| +.+|+|
T Consensus 35 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L 114 (313)
T 3cek_A 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDL 114 (313)
T ss_dssp EEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCCSEEH
T ss_pred EecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecCCCcH
Confidence 347899999999988889999999986543 2344678889999999974 99999999988766322 467899
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+++... ..+++..+..++.++++||+||| +.+|+||||||+||++++ +.+||+|||+++.+
T Consensus 115 ~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 115 NSWLKKK-KSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp HHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 9988754 35788899999999999999999 578999999999999965 89999999999864
No 364
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.74 E-value=3.1e-18 Score=176.86 Aligned_cols=136 Identities=27% Similarity=0.383 Sum_probs=113.5
Q ss_pred hhccccccceeeeec-cCCcceEEEEEeccc-hhhhhhhhHHHHHhhhhccCccceeecccCC------CC-----cccc
Q 039957 340 ISLAGSFGSVYKGTI-SDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCST------PD-----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l-~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~-----~~~~ 406 (481)
..+.|+||.||++.. .+|..||+|.+.... ....+.+.+|+.++.+++||||+++++++.. .+ ++|+
T Consensus 21 ~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~ 100 (676)
T 3qa8_A 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 100 (676)
T ss_dssp CCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECC
T ss_pred EEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeC
Confidence 447899999999986 468999999886542 3344568889999999999999999998755 21 6789
Q ss_pred cCCChhHHhhcCC--CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCc---EEEccccCcccC
Q 039957 407 PNGSLEKRLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMV---AHVSDFGISKLL 479 (481)
Q Consensus 407 ~~g~l~~~l~~~~--~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~---~kl~Dfgl~~~~ 479 (481)
++|+|.+++.... ..+++..+..|+.++++||+||| +.+|+||||||+||+++.++. +||+|||+|+..
T Consensus 101 ~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH----s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~ 174 (676)
T 3qa8_A 101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH----ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174 (676)
T ss_dssp SSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH----HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred CCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence 9999999987633 24777888999999999999999 578999999999999987654 999999999865
No 365
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.74 E-value=1.3e-18 Score=163.22 Aligned_cols=126 Identities=14% Similarity=0.166 Sum_probs=98.4
Q ss_pred hhhccccccceeeeeccCCcceEEEEEeccch------------------hhhhhhhHHHHHhhhhccCccceeecccCC
Q 039957 339 TISLAGSFGSVYKGTISDGTDVAIKIFNLQRE------------------RAFRSFNSECEVLRNVRHQNLIKILSSCST 400 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 400 (481)
...+.|+||.||+|...+|..||+|.+..... .....+.+|++++.+++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 34478999999999987789999999864321 12345788999999998 4 555554432
Q ss_pred C----CcccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCc
Q 039957 401 P----DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476 (481)
Q Consensus 401 ~----~~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~ 476 (481)
. .+||+++|+|.+ +.. .....++.++++|++||| +.+|+||||||+|||++ ++.+||+|||+|
T Consensus 173 ~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH----~~giiHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 173 EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY----HRGIVHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH----HCCCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 2 268999999988 422 123469999999999999 67899999999999999 999999999999
Q ss_pred ccCC
Q 039957 477 KLLG 480 (481)
Q Consensus 477 ~~~~ 480 (481)
+...
T Consensus 240 ~~~~ 243 (282)
T 1zar_A 240 VEVG 243 (282)
T ss_dssp EETT
T ss_pred eECC
Confidence 8653
No 366
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=1.6e-16 Score=156.34 Aligned_cols=264 Identities=13% Similarity=0.087 Sum_probs=131.0
Q ss_pred CCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceee
Q 039957 13 QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILD 92 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 92 (481)
..++.+.+.. .++.+.+.+|.++ +|+.+++..| ++ .++...|.. .+|+.+.+.. .++.+-+.+|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 3444444432 3444445555553 4555555544 43 444444433 3455555553 44444445555555555555
Q ss_pred cccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEE
Q 039957 93 LGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRF 172 (481)
Q Consensus 93 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 172 (481)
++.|.++.+...+|. ..+|+.+.+.. .++.+...+ +.++++|+.+++..| ++.+-..
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~-~l~~I~~~a--------F~~~~~L~~l~l~~~-l~~I~~~------------ 243 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPV-TLKEIGSQA--------FLKTSQLKTIEIPEN-VSTIGQE------------ 243 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCT-TCCEECTTT--------TTTCTTCCCEECCTT-CCEECTT------------
T ss_pred cCCCcceEechhhEe-ecccCEEEeCC-chheehhhH--------hhCCCCCCEEecCCC-ccCcccc------------
Confidence 555555554444454 35555555542 244443322 234555555555543 3333333
Q ss_pred EccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCC-----CCCCccccCccCCCeeecC
Q 039957 173 SASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQ-----GYVPHNLCHLEMLNLLHLG 247 (481)
Q Consensus 173 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~-----~~~p~~~~~l~~L~~L~L~ 247 (481)
.|.+ .+|+.+.+. +.++...+..|.++++|+.+.+++|.+. ...+.+|.++++|+.+++.
T Consensus 244 -------------aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 244 -------------AFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp -------------TTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred -------------cccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 3333 344444442 2233333444444555555544444332 2334455555566666655
Q ss_pred CCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCC-cCcEEEccCCee
Q 039957 248 GNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLK-VLRVLDLSRNQL 323 (481)
Q Consensus 248 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l 323 (481)
+ .++.+...+|.++++|+.+++..| ++..-+.+|.++ .|+.+.+++|.+....+..|..++ .++.+.+..+.+
T Consensus 309 ~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 309 E-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp T-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred C-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 3 355455556666666666666433 444455555555 666666666665555555555553 456666555443
No 367
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=5.5e-18 Score=146.42 Aligned_cols=138 Identities=21% Similarity=0.199 Sum_probs=105.6
Q ss_pred CCCCCCeeeCcCCccc-ccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCc
Q 039957 11 NLQNLKSLFLGANNLS-GLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLI 89 (481)
Q Consensus 11 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 89 (481)
..++|++|++++|+++ +.+|..+..+++|++|++++|.+++ + ..+. .+++|++|++++|++++.+|..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~-~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLP-KLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C-SSCC-CCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h-hhhc-cCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 3477889999999887 6678888888899999999998874 3 4443 688888999998888877888888888888
Q ss_pred eeecccCcceecC-cccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccce
Q 039957 90 ILDLGFNTFSGHI-PNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGG 156 (481)
Q Consensus 90 ~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 156 (481)
+|++++|.+++.. +..|..+++|++|++++|.+++.+... ...+..+++|++|++++|.+..
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~-----~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYR-----ESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHH-----HHHHTTCSSCCEETTEETTSCB
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHH-----HHHHHhCccCcEecCCCCChhh
Confidence 8888888888643 267888888888888888887763200 0134567778888888887763
No 368
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.74 E-value=3.3e-18 Score=169.08 Aligned_cols=120 Identities=27% Similarity=0.328 Sum_probs=96.1
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhc--------cCccceeecccCC----CC-----
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR--------HQNLIKILSSCST----PD----- 402 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~~----~~----- 402 (481)
.+.|+||.||++.. .+|..||+|.+... ....+.+.+|+.++++++ |+||+++++++.. ..
T Consensus 45 lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv 123 (397)
T 1wak_A 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMV 123 (397)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEE
T ss_pred eeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEE
Confidence 47899999999974 46889999998654 233456788999999986 7889999998762 21
Q ss_pred cccccCCChhHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCC-CeeeCCCCCCCeeeCCCC
Q 039957 403 FKFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSA-PIIHCDLKPTSILLDENM 466 (481)
Q Consensus 403 ~~~~~~g~l~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~-~i~H~dlk~~nill~~~~ 466 (481)
++|+ +|++.+++... ...+++..+..|+.+|++||+||| +. +||||||||+|||++.++
T Consensus 124 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH----~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 124 FEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH----TKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp ECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECCCCSGGGEEECCCH
T ss_pred Eecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----HhCCEecCCCCHHHeeEeccc
Confidence 5677 56676665543 356889999999999999999999 45 899999999999999775
No 369
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.73 E-value=3e-18 Score=175.28 Aligned_cols=125 Identities=18% Similarity=0.209 Sum_probs=97.1
Q ss_pred hhccccccceeeeeccCCcceEEEEEeccch--------hhhhhhhHHHHHhhhhccCccceeecccCCCC-----cccc
Q 039957 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------RAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~ 406 (481)
+.++|+||.||++.. .+..+++|....... ...+.+.+|++++++++|+||+++..++...+ +||+
T Consensus 343 ~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~ 421 (540)
T 3en9_A 343 LIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYI 421 (540)
T ss_dssp -----CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECC
T ss_pred EEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECC
Confidence 457899999999954 467888887644221 11345789999999999999994444433322 6899
Q ss_pred cCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccCC
Q 039957 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480 (481)
Q Consensus 407 ~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~~ 480 (481)
++|+|.+++.. +.+++.++++||+||| +.+|+||||||+|||+++ .+||+|||+|+...
T Consensus 422 ~ggsL~~~l~~---------~~~i~~qi~~aL~~LH----~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 422 NGKLAKDVIED---------NLDIAYKIGEIVGKLH----KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp CSEEHHHHSTT---------CTHHHHHHHHHHHHHH----HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred CCCCHHHHHHH---------HHHHHHHHHHHHHHHH----HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999864 4679999999999999 578999999999999999 99999999998764
No 370
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.73 E-value=6.2e-18 Score=163.21 Aligned_cols=133 Identities=24% Similarity=0.341 Sum_probs=110.4
Q ss_pred hccccccceeeeec--cCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCc------cceeecccCCCC-----ccccc
Q 039957 341 SLAGSFGSVYKGTI--SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQN------LIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 341 ~~~g~~g~vy~~~l--~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~-----~~~~~ 407 (481)
.+.|+||.||++.. .+|..||+|.+... ....+.+.+|++++.+++|++ ++++++++...+ +||+
T Consensus 22 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~- 99 (339)
T 1z57_A 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL- 99 (339)
T ss_dssp EEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-
T ss_pred EecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-
Confidence 47899999999974 36889999998653 233456788999999988775 888988886654 5788
Q ss_pred CCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-------------------CCc
Q 039957 408 NGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-------------------NMV 467 (481)
Q Consensus 408 ~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-------------------~~~ 467 (481)
++++.+++.... ..+++..+.+++.++++||+||| +.+|+||||||+||+++. ++.
T Consensus 100 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (339)
T 1z57_A 100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175 (339)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC
T ss_pred CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC
Confidence 899999887643 35788899999999999999999 578999999999999988 678
Q ss_pred EEEccccCcccC
Q 039957 468 AHVSDFGISKLL 479 (481)
Q Consensus 468 ~kl~Dfgl~~~~ 479 (481)
+||+|||+|+..
T Consensus 176 ~kl~Dfg~~~~~ 187 (339)
T 1z57_A 176 IKVVDFGSATYD 187 (339)
T ss_dssp EEECCCSSCEET
T ss_pred ceEeeCcccccC
Confidence 999999998764
No 371
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.73 E-value=4.9e-18 Score=163.34 Aligned_cols=134 Identities=24% Similarity=0.305 Sum_probs=107.7
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccch-hhhhhhhHHHH-HhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRE-RAFRSFNSECE-VLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..||+|.+..... .....+..|+. .++.++|+||+++++++...+ +||++ |++.
T Consensus 30 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~ 108 (327)
T 3aln_A 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFD 108 (327)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred eccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-CChH
Confidence 478999999999864 689999999875432 22334555555 677789999999999987765 56776 4776
Q ss_pred HHhhc----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCC-CeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYS----HNYFLDILERLNIMIDVGSTLEYLHHGHSSA-PIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~----~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~-~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
+++.. ....+++..+.+++.++++|++|||+ . +|+||||||+||++++++.+||+|||+++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 109 KFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE----NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH----HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred HHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc----cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 66542 24567888999999999999999994 5 8999999999999999999999999999765
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.7e-17 Score=146.52 Aligned_cols=112 Identities=23% Similarity=0.355 Sum_probs=59.3
Q ss_pred CCCeeecCCCcCCCCCCc-cccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEc
Q 039957 216 QLQGFFLPETNLQGYVPH-NLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINL 294 (481)
Q Consensus 216 ~L~~l~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 294 (481)
+++.|++++|++++..+. .|..+++|+.|+|++|++++..|..|..+++|++|++++|++++..|..|..++.|++|++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 344444444444433332 2444455555555555555544555555555555555555555555555555555555555
Q ss_pred cCcccCCCCCCccccCCcCcEEEccCCeeeeec
Q 039957 295 SSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDI 327 (481)
Q Consensus 295 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 327 (481)
++|++++..|..+..+++|++|++++|++.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 555555555555666666666666666666543
No 373
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.73 E-value=7.4e-18 Score=161.32 Aligned_cols=135 Identities=24% Similarity=0.293 Sum_probs=97.9
Q ss_pred hccccccceeeeecc-CCcceEEEEEeccchh-h-hhhhhHHHHHhhhhccCccceeecccCCCC-----cccccCCChh
Q 039957 341 SLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER-A-FRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLE 412 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~~~~g~l~ 412 (481)
.+.|+||.||++... +|..||+|.+...... . .+.+..+..++..++|+||+++++++...+ +||+ ++.+.
T Consensus 33 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~ 111 (318)
T 2dyl_A 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAE 111 (318)
T ss_dssp C------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHH
T ss_pred eeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHH
Confidence 368999999999865 6899999998754322 2 223334445677889999999999988765 4566 34444
Q ss_pred HHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 413 KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 413 ~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.........+++..+.+++.++++||+|||+ ..+|+||||||+||+++.++.+||+|||+++.+
T Consensus 112 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 112 KLKKRMQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 4433334567888999999999999999993 137999999999999999999999999998754
No 374
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.72 E-value=8.4e-18 Score=163.95 Aligned_cols=137 Identities=23% Similarity=0.312 Sum_probs=99.5
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhccCccceeecccCCC------------Ccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP------------DFKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------------~~~~~ 406 (481)
..+.|+||.||++... +|..||||.+.... .....+..++..+++++|+||++++++|... .++|+
T Consensus 30 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~ 108 (360)
T 3e3p_A 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108 (360)
T ss_dssp ---------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECC
T ss_pred EEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecc
Confidence 3478999999999864 68899999885432 2234456678888899999999999987431 14677
Q ss_pred cCCChhHHhh---cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC-CCcEEEccccCcccCC
Q 039957 407 PNGSLEKRLY---SHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE-NMVAHVSDFGISKLLG 480 (481)
Q Consensus 407 ~~g~l~~~l~---~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~-~~~~kl~Dfgl~~~~~ 480 (481)
++ ++...+. ......++.....++.+++.|++|+|.. +.+|+||||||+|||++. ++.+||+|||+|+.+.
T Consensus 109 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~ 183 (360)
T 3e3p_A 109 PD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP--SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183 (360)
T ss_dssp SC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST--TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCC
T ss_pred cc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC--CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecC
Confidence 75 4444333 2445677888899999999999999932 468999999999999997 8999999999998653
No 375
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.72 E-value=8.6e-18 Score=162.26 Aligned_cols=132 Identities=24% Similarity=0.349 Sum_probs=106.0
Q ss_pred hhhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHH-HHhhhhccCccceeecccCCC---------Cccccc
Q 039957 339 TISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSEC-EVLRNVRHQNLIKILSSCSTP---------DFKFMP 407 (481)
Q Consensus 339 ~l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~---------~~~~~~ 407 (481)
.+.+.|+||.||++... +|..||+|.+.... ....|+ ..+..++|+|++++++++... .+||++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 34578999999999865 68999999986432 122233 345667899999999987541 167999
Q ss_pred CCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCC---CCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~---~~~~kl~Dfgl~~~~ 479 (481)
+|+|.+++.... ..+++.++.+++.++++||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 110 gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH----~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 999999987643 46889999999999999999999 578999999999999976 456999999999754
No 376
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=4.3e-17 Score=144.02 Aligned_cols=128 Identities=26% Similarity=0.388 Sum_probs=104.7
Q ss_pred CeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeeccc
Q 039957 16 KSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGF 95 (481)
Q Consensus 16 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 95 (481)
+++++++|+++.+ |..+. ++|++|+|++|+|+ .+|..+. .+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~-~ip~~~~-~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFT-LVPKELS-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCSSC-CSCCC--TTCCEEECCSSCCC-SCCGGGG-GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCc-hhHHHhh-cccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 6788999988754 54442 57889999999997 7886665 788999999999999888888889999999999999
Q ss_pred CcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccce
Q 039957 96 NTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGG 156 (481)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 156 (481)
|+++++.|..|.++++|++|+|++|+++.++... +..+++|++|+|++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~--------~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA--------FNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTT--------TTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhh--------hhcCccccEEEeCCCCeec
Confidence 9999888888999999999999999988775433 4567788888888888864
No 377
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.71 E-value=8.4e-18 Score=166.92 Aligned_cols=136 Identities=18% Similarity=0.132 Sum_probs=100.2
Q ss_pred hhccccccceeeee-ccCCcceEEEEEeccch---hhhhhhhHHHHHhhhhcc-Cccceeecc-----------------
Q 039957 340 ISLAGSFGSVYKGT-ISDGTDVAIKIFNLQRE---RAFRSFNSECEVLRNVRH-QNLIKILSS----------------- 397 (481)
Q Consensus 340 l~~~g~~g~vy~~~-l~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h-~niv~l~~~----------------- 397 (481)
+.++|+||.||+|. ..+|..||||.+..... ...+.+.+|+.++..++| ++......+
T Consensus 85 ~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (413)
T 3dzo_A 85 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKK 164 (413)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---
T ss_pred ccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCc
Confidence 45789999999998 45789999999874332 234567889998888877 322211111
Q ss_pred ----cCCCC----cc-----cccCCChhHHhh------cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCC
Q 039957 398 ----CSTPD----FK-----FMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458 (481)
Q Consensus 398 ----~~~~~----~~-----~~~~g~l~~~l~------~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~ 458 (481)
+.... +. .+.+|+|.+++. .....+++..+..|+.++++||+||| +.+||||||||+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~iiHrDiKp~ 240 (413)
T 3dzo_A 165 MIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYLRPV 240 (413)
T ss_dssp ------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGG
T ss_pred cccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcccc
Confidence 00000 01 134678887773 22445778899999999999999999 578999999999
Q ss_pred CeeeCCCCcEEEccccCcccC
Q 039957 459 SILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 459 nill~~~~~~kl~Dfgl~~~~ 479 (481)
|||++.++.+||+|||+|+..
T Consensus 241 NILl~~~~~~kL~DFG~a~~~ 261 (413)
T 3dzo_A 241 DIVLDQRGGVFLTGFEHLVRD 261 (413)
T ss_dssp GEEECTTCCEEECCGGGCEET
T ss_pred eEEEecCCeEEEEeccceeec
Confidence 999999999999999998764
No 378
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.71 E-value=2.7e-17 Score=161.73 Aligned_cols=136 Identities=26% Similarity=0.344 Sum_probs=108.1
Q ss_pred hhccccccceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhc-cC-----ccceeecccCCCC-----ccccc
Q 039957 340 ISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-HQ-----NLIKILSSCSTPD-----FKFMP 407 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~-----~~~~~ 407 (481)
..+.|+||.||+|... +|..||+|.+.... .....+..|+.++..++ |+ +++++.+++...+ +||++
T Consensus 61 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~ 139 (382)
T 2vx3_A 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS 139 (382)
T ss_dssp EEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC
Confidence 3478999999999854 67889999987432 23445667888888775 44 4888888876654 56775
Q ss_pred CCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeC--CCCcEEEccccCcccC
Q 039957 408 NGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD--ENMVAHVSDFGISKLL 479 (481)
Q Consensus 408 ~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~--~~~~~kl~Dfgl~~~~ 479 (481)
|+|.+++.... ..+++..+..++.+++.||+|||.. ..+||||||||+|||++ +++.+||+|||+|+..
T Consensus 140 -~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 140 -YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp -CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred -CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 69999887643 4578999999999999999999942 36899999999999994 5789999999999765
No 379
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.71 E-value=8.6e-18 Score=164.68 Aligned_cols=133 Identities=21% Similarity=0.327 Sum_probs=108.0
Q ss_pred hccccccceeeeec-cCCcceEEEEEeccchhhhhhhhHHHHHhhhhc-----------cCccceeecccCCCC------
Q 039957 341 SLAGSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-----------HQNLIKILSSCSTPD------ 402 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~~~------ 402 (481)
.+.|+||.||++.. .+|..||+|.+.... .....+.+|+.++.+++ |+||+++++++...+
T Consensus 27 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 105 (373)
T 1q8y_A 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV 105 (373)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEE
T ss_pred eeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceE
Confidence 47899999999985 568899999986432 23455778888888876 889999999876431
Q ss_pred ---cccccCCChhHHhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCC-CeeeCCCCCCCeeeC------CCCcEEEc
Q 039957 403 ---FKFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSA-PIIHCDLKPTSILLD------ENMVAHVS 471 (481)
Q Consensus 403 ---~~~~~~g~l~~~l~~~-~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~-~i~H~dlk~~nill~------~~~~~kl~ 471 (481)
++|+ +++|.+++... ...+++..+.+++.+|++||+||| +. +|+||||||+|||++ ..+.+||+
T Consensus 106 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH----~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~ 180 (373)
T 1q8y_A 106 VMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH----RRCGIIHTDIKPENVLMEIVDSPENLIQIKIA 180 (373)
T ss_dssp EEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred EEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH----hcCCEEecCCChHHeEEeccCCCcCcceEEEc
Confidence 4566 88999988753 345788999999999999999999 45 899999999999994 45589999
Q ss_pred cccCcccC
Q 039957 472 DFGISKLL 479 (481)
Q Consensus 472 Dfgl~~~~ 479 (481)
|||+|+..
T Consensus 181 Dfg~a~~~ 188 (373)
T 1q8y_A 181 DLGNACWY 188 (373)
T ss_dssp CCTTCEET
T ss_pred cccccccc
Confidence 99999764
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=8.6e-18 Score=142.10 Aligned_cols=131 Identities=20% Similarity=0.195 Sum_probs=90.6
Q ss_pred CCCCCeeeCcCCccc-ccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCce
Q 039957 12 LQNLKSLFLGANNLS-GLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLII 90 (481)
Q Consensus 12 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 90 (481)
.++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+. .+++|++|++++|++++.+|..+..+++|++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLP-KLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCC-CCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhh-cCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 366788888888887 66777777888888888888888743 3343 6778888888888887667777777778888
Q ss_pred eecccCcceec-CcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEcc
Q 039957 91 LDLGFNTFSGH-IPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILS 150 (481)
Q Consensus 91 L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls 150 (481)
|++++|.+++. .+..++.+++|++|++++|.+++.+... ...+..+++|++|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYR-----ENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHH-----HHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHH-----HHHHHHCCCcccccCC
Confidence 88888877763 3466777777777777777776653200 0123445566666654
No 381
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.70 E-value=3.1e-17 Score=159.45 Aligned_cols=134 Identities=22% Similarity=0.317 Sum_probs=107.5
Q ss_pred hhccccccceeeeecc-CC-cceEEEEEeccchhhhhhhhHHHHHhhhhccCc------cceeecccCCCC-----cccc
Q 039957 340 ISLAGSFGSVYKGTIS-DG-TDVAIKIFNLQRERAFRSFNSECEVLRNVRHQN------LIKILSSCSTPD-----FKFM 406 (481)
Q Consensus 340 l~~~g~~g~vy~~~l~-~g-~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~-----~~~~ 406 (481)
..+.|+||.||++... ++ ..||+|.+... ....+.+..|+.++.+++|++ ++.+.+++...+ +||+
T Consensus 26 ~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~ 104 (355)
T 2eu9_A 26 NLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL 104 (355)
T ss_dssp EEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC
T ss_pred EeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc
Confidence 3478999999999853 34 68999998643 233456778999999998876 777777766544 5677
Q ss_pred cCCChhHHhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeee-------------------CCCC
Q 039957 407 PNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL-------------------DENM 466 (481)
Q Consensus 407 ~~g~l~~~l~~~~-~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill-------------------~~~~ 466 (481)
+|++.+++.... ..+++.++.+++.+|++||+||| +.+|+||||||+|||+ +.++
T Consensus 105 -~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 179 (355)
T 2eu9_A 105 -GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH----ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179 (355)
T ss_dssp -CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCC
T ss_pred -CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecccccccccccccccccccCCC
Confidence 677777666533 46889999999999999999999 6789999999999999 5689
Q ss_pred cEEEccccCcccC
Q 039957 467 VAHVSDFGISKLL 479 (481)
Q Consensus 467 ~~kl~Dfgl~~~~ 479 (481)
.+||+|||+|+..
T Consensus 180 ~~kl~Dfg~~~~~ 192 (355)
T 2eu9_A 180 SIRVADFGSATFD 192 (355)
T ss_dssp CEEECCCTTCEET
T ss_pred cEEEeecCccccc
Confidence 9999999999754
No 382
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.69 E-value=1.1e-15 Score=150.35 Aligned_cols=246 Identities=13% Similarity=0.123 Sum_probs=171.4
Q ss_pred chhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcccccc
Q 039957 8 EIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATK 87 (481)
Q Consensus 8 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 87 (481)
+|.+. +|+.+++..| ++.+...+|.++ +|+.+.+.. .++ .++...|..+++|+.+++++|+++.+...+|. ..+
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 57774 7999999876 888888999995 799999986 676 67777777899999999999999977777777 689
Q ss_pred CceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhccc
Q 039957 88 LIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFST 167 (481)
Q Consensus 88 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 167 (481)
|+.+.+..+ ++.+...+|.++++|+.+++..| ++.+...+| .+ .+|+.+.+. +.++.+-+..
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF--------~~-~~L~~i~lp-~~i~~I~~~a------ 266 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAF--------RE-SGITTVKLP-NGVTNIASRA------ 266 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTT--------TT-CCCSEEEEE-TTCCEECTTT------
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccc--------cc-CCccEEEeC-CCccEEChhH------
Confidence 999999854 88888999999999999999875 677765554 23 467777773 3344333334
Q ss_pred CccEEEccCCceeecCCcccccCCCCCeEecccccce-----ecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCC
Q 039957 168 SLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLN-----GTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLN 242 (481)
Q Consensus 168 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~ 242 (481)
|.++++|+.+++.+|.+. ...+..|.+|++|+.+.++ +.++.....+|.++.+|+
T Consensus 267 -------------------F~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 267 -------------------FYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp -------------------TTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred -------------------hhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 444444444444444332 3444556666666666665 335555556666666666
Q ss_pred eeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccc-cCcEEEccCccc
Q 039957 243 LLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLG-YILEINLSSNLL 299 (481)
Q Consensus 243 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l 299 (481)
.+++..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ .+..+.+..+.+
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 6666444 555556667776 777777777766655556666553 566666665544
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=1.5e-16 Score=138.59 Aligned_cols=133 Identities=25% Similarity=0.286 Sum_probs=97.8
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
.+.+++++|+++.+ |..+ .++|++|++++|+++ .+|...+..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 46788888888754 4333 367888888888887 4454443468888888888888887666677888888888888
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCC
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP 159 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 159 (481)
+|.+++..+..|..+++|++|++++|++++++... +..+++|++|+|++|.+.+..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--------~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGI--------FDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT--------TTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHH--------hcCCcccCEEEecCCCeeccCc
Confidence 88888777777888888888888888887664322 3566778888888888776543
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=5.5e-17 Score=140.10 Aligned_cols=130 Identities=24% Similarity=0.223 Sum_probs=66.5
Q ss_pred CccEEEccCCcee-ecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeec
Q 039957 168 SLQRFSASECKLK-GTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHL 246 (481)
Q Consensus 168 ~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 246 (481)
++++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++.+|..+..+++|+.|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4555555555554 44555555555666666666655533 44555555555555555555544444444555555555
Q ss_pred CCCeeeecCC-cccccCCCCCcEEcCCCcCcccCC---cchhccccCcEEEccCccc
Q 039957 247 GGNKLSGHIP-PCLASLTSLRELDLGSNKLTSSIP---SSLWSLGYILEINLSSNLL 299 (481)
Q Consensus 247 ~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l 299 (481)
++|++++..+ ..+..+++|+.|++++|.+++..+ ..+..++.|++|++++|.+
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 5555544221 445555555555555555553333 2344444444444444444
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=139.07 Aligned_cols=128 Identities=22% Similarity=0.325 Sum_probs=84.3
Q ss_pred eEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCc
Q 039957 195 YLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNK 274 (481)
Q Consensus 195 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 274 (481)
++++++|.++ .+|..+. ++|+.|++++|+++ .+|..|..+++|+.|+|++|++++..+..|..+++|++|++++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4445555544 3333322 34555556665555 344566666666777777777766666667777777777777777
Q ss_pred CcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeee
Q 039957 275 LTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 275 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 326 (481)
+++..|..|..++.|+.|++++|.++...+..|..+++|+.|++++|++.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 7766666677777777777777777766666677888888888888888764
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=4.5e-16 Score=135.56 Aligned_cols=132 Identities=23% Similarity=0.221 Sum_probs=86.0
Q ss_pred CeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCC
Q 039957 194 IYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSN 273 (481)
Q Consensus 194 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 273 (481)
+.+++++|+++ .+|..+. ++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444444444 2232221 35555666666665555555666666677777777766655566667777777777777
Q ss_pred cCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeecc
Q 039957 274 KLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIP 328 (481)
Q Consensus 274 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 328 (481)
++++..+..+..++.|++|++++|.+++..+..+..+++|++|++++|++.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7776666666677777777777777776666666778888888888888887554
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=7.9e-17 Score=136.11 Aligned_cols=109 Identities=20% Similarity=0.252 Sum_probs=54.3
Q ss_pred cCccEEEccCCcee-ecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeee
Q 039957 167 TSLQRFSASECKLK-GTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLH 245 (481)
Q Consensus 167 ~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 245 (481)
++++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34566666666655 45555555555555555555555533 4444455555555555555444444444444444444
Q ss_pred cCCCeeeec-CCcccccCCCCCcEEcCCCcCcc
Q 039957 246 LGGNKLSGH-IPPCLASLTSLRELDLGSNKLTS 277 (481)
Q Consensus 246 L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~ 277 (481)
+++|++++. .+..+..+++|++|++++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~ 127 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN 127 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc
Confidence 444444432 12344444444444444444443
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.65 E-value=2e-16 Score=137.63 Aligned_cols=110 Identities=17% Similarity=0.170 Sum_probs=52.0
Q ss_pred hhCCCCCCeeeCcCCcccccCChhccCCc-CCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcccccc
Q 039957 9 IGNLQNLKSLFLGANNLSGLIPPMIFNIS-TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATK 87 (481)
Q Consensus 9 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 87 (481)
+..+.+|++|++++|+++.+ |. +..+. +|++|++++|++++ + ..+. .+++|++|++++|++++..+..|..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRK-L-DGFP-LLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCE-E-CCCC-CCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCc-c-cccc-cCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34445555555555555533 32 22222 55555555555543 2 2222 4555555555555555443333455555
Q ss_pred CceeecccCcceecCcc--cccCCCCCCEEEcccccCcc
Q 039957 88 LIILDLGFNTFSGHIPN--TFGNLRHLSVLSLLMNNLTT 124 (481)
Q Consensus 88 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~ 124 (481)
|++|++++|.++. +|. .+..+++|++|++++|.++.
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC
Confidence 5555555555542 232 44455555555555555443
No 389
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.63 E-value=1.5e-16 Score=147.44 Aligned_cols=130 Identities=20% Similarity=0.246 Sum_probs=93.1
Q ss_pred hccccccceeeeec-cCCcc--eEEEEEeccchh------------------------hhhhhhHHHHHhhhhccCcc--
Q 039957 341 SLAGSFGSVYKGTI-SDGTD--VAIKIFNLQRER------------------------AFRSFNSECEVLRNVRHQNL-- 391 (481)
Q Consensus 341 ~~~g~~g~vy~~~l-~~g~~--vavK~l~~~~~~------------------------~~~~~~~e~~~l~~l~h~ni-- 391 (481)
.+.|+||.||+|.. .+|.. ||||.+...... ....+..|+..+.+++|+++
T Consensus 55 ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 134 (258)
T 1zth_A 55 ISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSV 134 (258)
T ss_dssp EEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 47899999999987 68888 999987543111 01246789999999988764
Q ss_pred ceeecccCC-CCcccccC-C----ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCC
Q 039957 392 IKILSSCST-PDFKFMPN-G----SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN 465 (481)
Q Consensus 392 v~l~~~~~~-~~~~~~~~-g----~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~ 465 (481)
..+++.... -.+||+.+ | +|.+.... .++.....++.++++|++|||. ..+||||||||+|||+++
T Consensus 135 p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~givHrDlkp~NILl~~- 206 (258)
T 1zth_A 135 PQPYTYMKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ---EAELVHADLSEYNIMYID- 206 (258)
T ss_dssp CCEEEEETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH---TSCEECSSCSTTSEEESS-
T ss_pred CeEEEcCCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEEcC-
Confidence 333332100 12678842 4 56554332 1233456799999999999994 357999999999999998
Q ss_pred CcEEEccccCcccC
Q 039957 466 MVAHVSDFGISKLL 479 (481)
Q Consensus 466 ~~~kl~Dfgl~~~~ 479 (481)
.++|+|||+|...
T Consensus 207 -~~~liDFG~a~~~ 219 (258)
T 1zth_A 207 -KVYFIDMGQAVTL 219 (258)
T ss_dssp -SEEECCCTTCEET
T ss_pred -cEEEEECcccccC
Confidence 9999999999765
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=8.2e-18 Score=149.48 Aligned_cols=139 Identities=24% Similarity=0.335 Sum_probs=112.3
Q ss_pred chhCCCCCCeeeCcCCcccccCCh------hccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchh
Q 039957 8 EIGNLQNLKSLFLGANNLSGLIPP------MIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNS 81 (481)
Q Consensus 8 ~~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~ 81 (481)
.+.....++.++++.+.+++..|. .|..+++|++|++++|++++ +| .+. .+++|++|++++|+++ .+|..
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~-~l~~L~~L~l~~n~l~-~l~~~ 88 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLS-GMENLRILSLGRNLIK-KIENL 88 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHH-HHTTCCEEEEEEEEEC-SCSSH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccc-cCCCCCEEECCCCCcc-cccch
Confidence 356678899999999999988887 88999999999999999984 77 554 6899999999999987 67777
Q ss_pred ccccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCC
Q 039957 82 ITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP 159 (481)
Q Consensus 82 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 159 (481)
+..+++|++|++++|++++ +| .++.+++|++|++++|+++.++. +..+..+++|++|++++|.+++..|
T Consensus 89 ~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~-------~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 89 DAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE-------IDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH-------HHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred hhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH-------HHHHhcCCCCCEEEecCCccccccc
Confidence 8888999999999999986 34 68888899999999998886532 1235667788888888888876544
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=7.9e-16 Score=133.84 Aligned_cols=136 Identities=20% Similarity=0.235 Sum_probs=99.8
Q ss_pred hhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCC
Q 039957 31 PMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLR 110 (481)
Q Consensus 31 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 110 (481)
..+.++++|++|++++|+++ .+|. +....++|++|++++|++++. ..|..+++|++|++++|.+++..|..|+.++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 45778899999999999998 5665 333345999999999999865 5788999999999999999987667778999
Q ss_pred CCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh----hhhcccCccEEEccCCce
Q 039957 111 HLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS----IGNFSTSLQRFSASECKL 179 (481)
Q Consensus 111 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~----~~~~~~~L~~L~l~~n~l 179 (481)
+|++|++++|.++.++.. ..+..+++|++|++++|.++. +|.. +..+ ++|+.|+++.|..
T Consensus 89 ~L~~L~L~~N~i~~~~~~-------~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l-~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDL-------DPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKV-PQVRVLDFQKVKL 152 (176)
T ss_dssp TCCEEECCSCCCCCGGGG-------GGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHC-TTCSEETTEECCH
T ss_pred CCCEEECCCCcCCcchhh-------HhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHC-CccceeCCCcCCH
Confidence 999999999998765321 235567778888888887763 3332 3333 3444444444443
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=5.1e-18 Score=150.79 Aligned_cols=109 Identities=25% Similarity=0.281 Sum_probs=65.8
Q ss_pred ccCCcCCCEEEeeCCcCccccCh------hhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccc
Q 039957 33 IFNISTIRNLNLGGNRLSGHLPS------MIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTF 106 (481)
Q Consensus 33 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 106 (481)
+.....++.++++.|.++|.+|. .+. .+++|++|++++|++++ +| .+..+++|++|++++|.++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~-~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLS-TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHH-HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHh-cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 44455666666777777666654 444 56677777777776664 44 6666667777777777666 355555
Q ss_pred cCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccc
Q 039957 107 GNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLG 155 (481)
Q Consensus 107 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 155 (481)
..+++|++|++++|++++++ .+..+++|++|++++|+++
T Consensus 90 ~~~~~L~~L~L~~N~l~~l~----------~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 90 AVADTLEELWISYNQIASLS----------GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHHHCSEEEEEEEECCCHH----------HHHHHHHSSEEEESEEECC
T ss_pred hcCCcCCEEECcCCcCCcCC----------ccccCCCCCEEECCCCcCC
Confidence 55666666666666665542 1233445555555555554
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.61 E-value=2.3e-14 Score=141.31 Aligned_cols=309 Identities=11% Similarity=0.035 Sum_probs=180.6
Q ss_pred chhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhcccccc
Q 039957 8 EIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATK 87 (481)
Q Consensus 8 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 87 (481)
+|.++++|+.+.+.. .++.+...+|.++++|+.+++..+ ++ .++...+....+|+.+.+..+ +...-..+|.++..
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 577888888888864 477777788888888888888755 55 566666667777877776654 34344555655544
Q ss_pred CceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhccc
Q 039957 88 LIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFST 167 (481)
Q Consensus 88 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 167 (481)
+....... ...+...+|.++++|+.+.+..+ ++.+...+ +.++++|+.+++..| ++......|... .
T Consensus 142 ~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~--------F~~c~~L~~i~l~~~-~~~I~~~~F~~~-~ 208 (394)
T 4fs7_A 142 KEITIPEG--VTVIGDEAFATCESLEYVSLPDS-METLHNGL--------FSGCGKLKSIKLPRN-LKIIRDYCFAEC-I 208 (394)
T ss_dssp SEEECCTT--CCEECTTTTTTCTTCCEEECCTT-CCEECTTT--------TTTCTTCCBCCCCTT-CCEECTTTTTTC-T
T ss_pred cccccCcc--ccccchhhhcccCCCcEEecCCc-cceecccc--------ccCCCCceEEEcCCC-ceEeCchhhccc-c
Confidence 33333222 22344566777777887777644 33443333 355666777777665 443334444443 3
Q ss_pred CccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecC
Q 039957 168 SLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLG 247 (481)
Q Consensus 168 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~ 247 (481)
.|+.+.+..+... +...+....+|+.+.+..+ ++......|..+..++.+.+..+.. ......|.....++.+...
T Consensus 209 ~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~ 284 (394)
T 4fs7_A 209 LLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYG 284 (394)
T ss_dssp TCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEEC
T ss_pred ccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-eeeccccccccccceeccC
Confidence 5665555544332 2223333455666655433 2333445566666666666655432 2344556666666666655
Q ss_pred CCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeec
Q 039957 248 GNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDI 327 (481)
Q Consensus 248 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 327 (481)
.+.+ ...+|..+.+|+.+.+..+ ++..-+.+|.++..|+.+++..+ ++.+-..+|.++.+|+.+++..| +....
T Consensus 285 ~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~ 358 (394)
T 4fs7_A 285 SVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIG 358 (394)
T ss_dssp SSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred ceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEeh
Confidence 5442 2345666666666666543 44445556666666666666543 44444556666667777766655 55455
Q ss_pred cccccccCChhhhhcc
Q 039957 328 PSTIGALVDLETISLA 343 (481)
Q Consensus 328 p~~~~~l~~L~~l~~~ 343 (481)
..+|.+|.+|+.+.+.
T Consensus 359 ~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 359 ANAFQGCINLKKVELP 374 (394)
T ss_dssp TTTBTTCTTCCEEEEE
T ss_pred HHHhhCCCCCCEEEEC
Confidence 5666666666666554
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=6.8e-15 Score=127.02 Aligned_cols=104 Identities=28% Similarity=0.344 Sum_probs=52.0
Q ss_pred CEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEccc
Q 039957 40 RNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLM 119 (481)
Q Consensus 40 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 119 (481)
+.+++++|+++ .+|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 44555555554 344433 14455555555555544455555555555555555555544444455555555555555
Q ss_pred ccCccccCCCccccccccCCCCCCCcEEEccCCccc
Q 039957 120 NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLG 155 (481)
Q Consensus 120 N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 155 (481)
|+|+++++.. +..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~--------~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGA--------FDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTT--------TTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHH--------hcCCCCCCEEEeCCCCCC
Confidence 5555443221 334455555555555554
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=7.7e-15 Score=126.68 Aligned_cols=109 Identities=23% Similarity=0.276 Sum_probs=93.9
Q ss_pred CCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeec
Q 039957 14 NLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDL 93 (481)
Q Consensus 14 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 93 (481)
..+++++++|+++. +|..+ .++|++|+|++|+|++..|..+. .+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFD-RLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTT-TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhc-CcccCCEEECCCCCcCccChhhccCCCCCCEEEC
Confidence 35789999999986 45544 37899999999999965566564 7999999999999999888888899999999999
Q ss_pred ccCcceecCcccccCCCCCCEEEcccccCcccc
Q 039957 94 GFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTES 126 (481)
Q Consensus 94 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 126 (481)
++|+|+++.+..|..+++|++|+|++|.++...
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999999888888999999999999999988753
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=1.4e-14 Score=125.48 Aligned_cols=104 Identities=23% Similarity=0.287 Sum_probs=57.5
Q ss_pred CEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEccc
Q 039957 40 RNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLM 119 (481)
Q Consensus 40 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 119 (481)
+.+++++|+++ .+|..++ ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 45555555554 4554432 4555555555555555555555556666666666666555444555566666666666
Q ss_pred ccCccccCCCccccccccCCCCCCCcEEEccCCccc
Q 039957 120 NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLG 155 (481)
Q Consensus 120 N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 155 (481)
|+|++++.. .+..+++|++|+|++|.+.
T Consensus 91 N~l~~l~~~--------~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRG--------AFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTT--------TTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHH--------HhccccCCCEEEeCCCCcc
Confidence 665554322 1344555666666666655
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.6e-14 Score=125.10 Aligned_cols=108 Identities=23% Similarity=0.268 Sum_probs=91.7
Q ss_pred CCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 15 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
-+.+++++|+++. +|..+. ++|++|+|++|+|++..|..+. .+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 14 ~~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFD-HLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhc-CCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 3789999999975 565553 7899999999999865566664 79999999999999998777778999999999999
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCcccc
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTES 126 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 126 (481)
+|+|++..+..|..+++|++|+|++|.+...+
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 99999877777999999999999999988753
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.1e-12 Score=129.35 Aligned_cols=296 Identities=10% Similarity=0.066 Sum_probs=220.3
Q ss_pred cccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecccCcceecCc
Q 039957 24 NLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIP 103 (481)
Q Consensus 24 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 103 (481)
.++.+-..+|.++++|+.+.+..+ ++ .+++..|..+++|+.+++.++ ++.+-..+|.++++|+.+.+..+ +..+..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-cc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc
Confidence 456677788999999999999754 76 677777778899999999765 56566678999999998888754 555667
Q ss_pred ccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCceeecC
Q 039957 104 NTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTI 183 (481)
Q Consensus 104 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~ 183 (481)
.+|.+...++..... ....+.. ..+.++++|+.+.+.++. .......|..+ .+|+.+.+..+ ++..-
T Consensus 134 ~aF~~~~~~~~~~~~--~~~~i~~--------~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c-~~L~~i~l~~~-~~~I~ 200 (394)
T 4fs7_A 134 EAFKGCDFKEITIPE--GVTVIGD--------EAFATCESLEYVSLPDSM-ETLHNGLFSGC-GKLKSIKLPRN-LKIIR 200 (394)
T ss_dssp TTTTTCCCSEEECCT--TCCEECT--------TTTTTCTTCCEEECCTTC-CEECTTTTTTC-TTCCBCCCCTT-CCEEC
T ss_pred eeeecccccccccCc--cccccch--------hhhcccCCCcEEecCCcc-ceeccccccCC-CCceEEEcCCC-ceEeC
Confidence 778777654443322 2223322 345788999999998764 33445556555 57999998876 55456
Q ss_pred CcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeecCCCeeeecCCcccccCC
Q 039957 184 PKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLT 263 (481)
Q Consensus 184 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 263 (481)
...|.++..|+.+.+..+... +...+.....|+.+.+..+ ++......|.....++.+.+..+... ....+|..+.
T Consensus 201 ~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~ 276 (394)
T 4fs7_A 201 DYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCS 276 (394)
T ss_dssp TTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCT
T ss_pred chhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eecccccccc
Confidence 678899999999988776543 3444555678888888643 44455667888899999999887554 6678899999
Q ss_pred CCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeeeccccccccCChhhhhcc
Q 039957 264 SLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343 (481)
Q Consensus 264 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~ 343 (481)
.++.+....+.+ ....|..+..|+.+.+..+ ++.+....|.++.+|+.+++..+ ++..-..+|.+|.+|+.+.+.
T Consensus 277 ~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 277 GLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 999998877653 3456788899999999765 65566778999999999999755 776678899999999999876
Q ss_pred cc
Q 039957 344 GS 345 (481)
Q Consensus 344 g~ 345 (481)
.+
T Consensus 352 ~~ 353 (394)
T 4fs7_A 352 LS 353 (394)
T ss_dssp TT
T ss_pred cc
Confidence 44
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.48 E-value=7.1e-16 Score=150.30 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=19.0
Q ss_pred CccEEEccCCceeec----CCcccccCCCCCeEeccccccee
Q 039957 168 SLQRFSASECKLKGT----IPKEIGHLRGLIYLSLGFNDLNG 205 (481)
Q Consensus 168 ~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 205 (481)
+|++|++++|.++.. ++..+...++|++|+|++|.|+.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 455555555555421 22233344566666666666553
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=7.1e-13 Score=128.29 Aligned_cols=105 Identities=19% Similarity=0.203 Sum_probs=67.6
Q ss_pred eeeCcCC-cccccCChhccCCcCCCEEEeeC-CcCccccChhhhcCCCCccEEEccCccceeecchhccccccCceeecc
Q 039957 17 SLFLGAN-NLSGLIPPMIFNISTIRNLNLGG-NRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLG 94 (481)
Q Consensus 17 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 94 (481)
.++++++ ++++ +|. +..+++|++|+|++ |+|++..|..+ ..+++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDL-RGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGS-CSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHh-ccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 4566666 6664 455 66677777777774 77763333333 367777777777777776666667777777777777
Q ss_pred cCcceecCcccccCCCCCCEEEcccccCccc
Q 039957 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE 125 (481)
Q Consensus 95 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 125 (481)
+|+|++..+..|..++ |+.|+|.+|.+...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 7777765555565555 67777776666654
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.39 E-value=4.7e-11 Score=117.52 Aligned_cols=311 Identities=11% Similarity=0.134 Sum_probs=190.9
Q ss_pred chhCCC-CCCeeeCcCCcccccCChhccCCcCCCEEEeeCCc---CccccChhhhcCCCCccEEEccCccceeecchhcc
Q 039957 8 EIGNLQ-NLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNR---LSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSIT 83 (481)
Q Consensus 8 ~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 83 (481)
+|.+.+ .|+.+.+-. .++.+-..+|.++++|+.+.++.|. ++ .+....|....+|+.+.+..+ ++.+...+|.
T Consensus 58 aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cceehhhhhh
Confidence 355553 477777754 3666667777777777777776654 44 455555556667777666654 4445556677
Q ss_pred ccccCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhh
Q 039957 84 NATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIG 163 (481)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (481)
.+.+|+.+.+..+ +..+....|....+|+.+.+..+ ++.+...+|. ...|+.+.+..+-. ......|.
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~---------~~~l~~i~ip~~~~-~i~~~af~ 202 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT---------GTALTQIHIPAKVT-RIGTNAFS 202 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT---------TCCCSEEEECTTCC-EECTTTTT
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEecccccc---------ccceeEEEECCccc-ccccchhh
Confidence 7777777777543 44455666777777777777543 4544443331 23466666554322 22233333
Q ss_pred hcccCccEEEccCCceeecCCcc--------------cccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCC
Q 039957 164 NFSTSLQRFSASECKLKGTIPKE--------------IGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQG 229 (481)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~p~~--------------~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 229 (481)
.. .++.......+.... +... +.....+..+.+. +.++..-...|..+..|+.+.+..+. ..
T Consensus 203 ~c-~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~-~~ 278 (394)
T 4gt6_A 203 EC-FALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSV-VS 278 (394)
T ss_dssp TC-TTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTC-CE
T ss_pred hc-cccceeccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEeccccc-ce
Confidence 33 234444433332221 1111 0111223333332 23444455678888999999886653 33
Q ss_pred CCCccccCccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCcccc
Q 039957 230 YVPHNLCHLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQK 309 (481)
Q Consensus 230 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 309 (481)
....+|.++..|+.+.+. +.++.+...+|.++.+|+.+++..+ ++..-..+|.++.+|+.+.+..+ ++.+-...|.+
T Consensus 279 I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~ 355 (394)
T 4gt6_A 279 IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSN 355 (394)
T ss_dssp ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTT
T ss_pred ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhC
Confidence 556788888999999986 4566677788999999999999764 66666788889999999999755 66666778999
Q ss_pred CCcCcEEEccCCeeeeeccccccccCChhhhhcc
Q 039957 310 LKVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343 (481)
Q Consensus 310 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~~~ 343 (481)
+.+|+.+++.++.... ..+..+..|+.+.+.
T Consensus 356 C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~ 386 (394)
T 4gt6_A 356 CTALNNIEYSGSRSQW---NAISTDSGLQNLPVA 386 (394)
T ss_dssp CTTCCEEEESSCHHHH---HTCBCCCCC------
T ss_pred CCCCCEEEECCceeeh---hhhhccCCCCEEEeC
Confidence 9999999998876542 356667777777654
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=6.7e-11 Score=116.41 Aligned_cols=300 Identities=11% Similarity=0.136 Sum_probs=219.3
Q ss_pred ccccCChhccCCc-CCCEEEeeCCcCccccChhhhcCCCCccEEEccCcc---ceeecchhccccccCceeecccCccee
Q 039957 25 LSGLIPPMIFNIS-TIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNN---LIGTIPNSITNATKLIILDLGFNTFSG 100 (481)
Q Consensus 25 l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 100 (481)
++.+-..+|.++. .|+.+.+..+ ++ .|.+..|...++|+.+.++.|. ++.+-..+|.++.+|+.+.+..+ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 4556677888884 6999999765 76 6777777789999999998874 66666778999999999988755 666
Q ss_pred cCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChhhhhcccCccEEEccCCcee
Q 039957 101 HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLK 180 (481)
Q Consensus 101 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~ 180 (481)
+...+|.+..+|+.+.+..+ ++.+...+ +..+..|+.+.+.++ ++.+-...|.. ..|+.+.+..+-..
T Consensus 128 I~~~aF~~c~~L~~i~lp~~-~~~I~~~~--------F~~c~~L~~i~~~~~-~~~I~~~aF~~--~~l~~i~ip~~~~~ 195 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEG-VTSVADGM--------FSYCYSLHTVTLPDS-VTAIEERAFTG--TALTQIHIPAKVTR 195 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTT--------TTTCTTCCEEECCTT-CCEECTTTTTT--CCCSEEEECTTCCE
T ss_pred ehhhhhhhhcccccccccce-eeeecccc--------eecccccccccccce-eeEeccccccc--cceeEEEECCcccc
Confidence 77888999999999999643 45554333 467888999998765 44444455543 46888888765433
Q ss_pred ecCCcccccCCCCCeEecccccceecCCcC--------------CcCCCCCCeeecCCCcCCCCCCccccCccCCCeeec
Q 039957 181 GTIPKEIGHLRGLIYLSLGFNDLNGTIPTS--------------IGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHL 246 (481)
Q Consensus 181 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--------------~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 246 (481)
.-...|..+.++.......+.... +... +.....+..+.+. +.++.....+|.++..|+.+.+
T Consensus 196 -i~~~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~l 272 (394)
T 4gt6_A 196 -IGTNAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKM 272 (394)
T ss_dssp -ECTTTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEEC
T ss_pred -cccchhhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEec
Confidence 455677788888877665544321 1111 1112233344442 2334445667889999999999
Q ss_pred CCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEEEccCCeeeee
Q 039957 247 GGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVLDLSRNQLSGD 326 (481)
Q Consensus 247 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 326 (481)
..+..+ +...+|.++++|+.+.+. +.++......|.++.+|+.+.+..+ ++.+-...|.++.+|+.+.+..+ ++..
T Consensus 273 p~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I 348 (394)
T 4gt6_A 273 PDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKI 348 (394)
T ss_dssp CTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBC
T ss_pred ccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEE
Confidence 776543 667889999999999996 4666677788999999999999865 65566788999999999999755 6656
Q ss_pred ccccccccCChhhhhccccc
Q 039957 327 IPSTIGALVDLETISLAGSF 346 (481)
Q Consensus 327 ~p~~~~~l~~L~~l~~~g~~ 346 (481)
-..+|.+|.+|+.+.+.++.
T Consensus 349 ~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 349 PESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CGGGGTTCTTCCEEEESSCH
T ss_pred hHhHhhCCCCCCEEEECCce
Confidence 67899999999999887653
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=1.3e-12 Score=126.37 Aligned_cols=106 Identities=24% Similarity=0.214 Sum_probs=92.4
Q ss_pred CEEEeeCC-cCccccChhhhcCCCCccEEEccC-ccceeecchhccccccCceeecccCcceecCcccccCCCCCCEEEc
Q 039957 40 RNLNLGGN-RLSGHLPSMIGHSLPNIKYLELGD-NNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117 (481)
Q Consensus 40 ~~L~L~~N-~l~~~~p~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (481)
..++++++ +++ .+|. +. .+++|++|+|++ |+|++..+..|.++++|++|+|++|+|+++.|..|++|++|++|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~-~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LP-GAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SC-SCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CC-CCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45789998 898 6898 65 799999999996 9999888899999999999999999999999999999999999999
Q ss_pred ccccCccccCCCccccccccCCCCCCCcEEEccCCcccee
Q 039957 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGI 157 (481)
Q Consensus 118 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 157 (481)
++|+|+++++..| ..++ |++|+|++|.+...
T Consensus 88 ~~N~l~~~~~~~~--------~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALESLSWKTV--------QGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CSSCCSCCCSTTT--------CSCC-CCEEECCSSCCCCC
T ss_pred CCCccceeCHHHc--------ccCC-ceEEEeeCCCccCC
Confidence 9999998865443 3333 99999999998743
No 404
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.35 E-value=5e-13 Score=128.72 Aligned_cols=126 Identities=13% Similarity=0.085 Sum_probs=83.2
Q ss_pred hccccccceeeeeccCCcceEEEEEeccch-----hh---------hhhhhHHHHHhhhhccCccceeecccCC------
Q 039957 341 SLAGSFGSVYKGTISDGTDVAIKIFNLQRE-----RA---------FRSFNSECEVLRNVRHQNLIKILSSCST------ 400 (481)
Q Consensus 341 ~~~g~~g~vy~~~l~~g~~vavK~l~~~~~-----~~---------~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 400 (481)
.+.|++|.||+|..++|..||||.+..... .. ......++.+.+...|+|++++......
T Consensus 103 IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~ 182 (397)
T 4gyi_A 103 IGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIA 182 (397)
T ss_dssp EEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEE
T ss_pred eeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeee
Confidence 378999999999988999999998754311 00 0011112222222234444444322111
Q ss_pred -----CCcccccCCChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCC---------
Q 039957 401 -----PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM--------- 466 (481)
Q Consensus 401 -----~~~~~~~~g~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~--------- 466 (481)
..+||++++++.+.... ....+++.+++.++.|+| ..+||||||||.|||+++++
T Consensus 183 ~~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH----~~gIVHrDLKp~NILl~~dgd~~d~~~~~ 251 (397)
T 4gyi_A 183 QSRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA----KHGLIHGDFNEFNILIREEKDAEDPSSIT 251 (397)
T ss_dssp EETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEEEEECSSCTTSEE
T ss_pred ccCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeCCCCcccccccc
Confidence 12678988888664321 123457899999999999 56799999999999998876
Q ss_pred -cEEEccccCcc
Q 039957 467 -VAHVSDFGISK 477 (481)
Q Consensus 467 -~~kl~Dfgl~~ 477 (481)
.+.|.||+-+-
T Consensus 252 ~~~~iID~~Q~V 263 (397)
T 4gyi_A 252 LTPIIIXFPQMV 263 (397)
T ss_dssp EEEEECCCTTCE
T ss_pred cceEEEEeCCcc
Confidence 48999999753
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=7.8e-14 Score=135.86 Aligned_cols=165 Identities=18% Similarity=0.165 Sum_probs=87.7
Q ss_pred CCccEEEccCccceeecchhcccc-----ccCceeecccCcceecCcccc-cCCCCCCEEEcccccCccccCCCcccccc
Q 039957 62 PNIKYLELGDNNLIGTIPNSITNA-----TKLIILDLGFNTFSGHIPNTF-GNLRHLSVLSLLMNNLTTESSSAYQWSFL 135 (481)
Q Consensus 62 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 135 (481)
+.|++|+|++|.++......+... ++|+.|+|++|.++......+ ..+++|++|+|++|.++......+ .
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L----~ 147 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDL----R 147 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHH----H
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHH----H
Confidence 445555555555543322222222 455555555555543222222 223455555555555543211110 0
Q ss_pred ccC-CCCCCCcEEEccCCcccee----CChhhhhcccCccEEEccCCceee----cCCcccccCCCCCeEecccccceec
Q 039957 136 SSL-TNCRYLVYLILSGNPLGGI----LPPSIGNFSTSLQRFSASECKLKG----TIPKEIGHLRGLIYLSLGFNDLNGT 206 (481)
Q Consensus 136 ~~l-~~l~~L~~L~Ls~N~l~~~----~p~~~~~~~~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~ 206 (481)
..+ ...+.|++|+|++|.++.. ++..+... ++|++|++++|.++. .++..+...++|++|+|++|.++..
T Consensus 148 ~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~-~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 148 DLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGN-TSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp HHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTC-SSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred HHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcC-CCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 011 1234566666666665432 11222222 456666666666653 2345566778999999999999753
Q ss_pred ----CCcCCcCCCCCCeeecCCCcCCCCC
Q 039957 207 ----IPTSIGTLKQLQGFFLPETNLQGYV 231 (481)
Q Consensus 207 ----~p~~~~~l~~L~~l~l~~n~l~~~~ 231 (481)
++..+...++|+.|++++|.++...
T Consensus 227 g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 227 AALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp HHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred HHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 3344556788999999999987543
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.18 E-value=5.1e-09 Score=102.31 Aligned_cols=303 Identities=8% Similarity=0.017 Sum_probs=164.5
Q ss_pred hhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccccC
Q 039957 9 IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKL 88 (481)
Q Consensus 9 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 88 (481)
+....+|+.+.+.. .++.+...+|.++.+|+.+++..+ ++ .++...|.. .+|+.+.+..+ ++.+-..+|... +|
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~-c~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFAD-TKLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTT-CCCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcC-CCCceEECCce-eeEeccceeccC-Cc
Confidence 45556777777754 577777778888888888888654 65 666666644 36777777654 444445556554 68
Q ss_pred ceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCChh-------
Q 039957 89 IILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPS------- 161 (481)
Q Consensus 89 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~------- 161 (481)
+.+.+..+ ++.+...+|.+. +|+...+.. .++.+...+ +..+..++...+..+.........
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~--------f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKDGI--------GYKAENLEKIEVSSNNKNYVAENYVLYNKNK 184 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECT-TCCEECSCT--------TTTCTTCCEEEECTTCSSEEEETTEEEETTS
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccc-eeeccccch--------hcccccccccccccccceeecccceeccccc
Confidence 88877654 333444555543 455555432 233332222 345556666665544332111000
Q ss_pred -----hhhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCcccc
Q 039957 162 -----IGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLC 236 (481)
Q Consensus 162 -----~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~ 236 (481)
+... ..+..+.+.... .......+....+|+.+.+..+ +.......|..+..|+.+.+..+ ++.....+|.
T Consensus 185 ~~~~~~~~~-~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~ 260 (379)
T 4h09_A 185 TILESYPAA-KTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQ 260 (379)
T ss_dssp SEEEECCTT-CCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTT
T ss_pred ceecccccc-ccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccc
Confidence 0000 122223222221 1122334455556666655443 33344555666666666666544 4444455666
Q ss_pred CccCCCeeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCcCcEE
Q 039957 237 HLEMLNLLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKVLRVL 316 (481)
Q Consensus 237 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 316 (481)
++..|+.+.+..+ +......+|.++++|+.+.+.++.++..-+.+|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+
T Consensus 261 ~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 261 NCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp TCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred eeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 6666666666433 44444556666666666666666666555566666666666666543 444445556666666666
Q ss_pred EccCCeeeeeccccccccC
Q 039957 317 DLSRNQLSGDIPSTIGALV 335 (481)
Q Consensus 317 ~l~~N~l~~~~p~~~~~l~ 335 (481)
.+..+ ++..-..+|.++.
T Consensus 339 ~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 339 SYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCCTT-CCEECTTTTTTSS
T ss_pred EECCc-cCEEchhHhhCCC
Confidence 66443 4434445555543
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.14 E-value=8.7e-09 Score=100.66 Aligned_cols=291 Identities=6% Similarity=0.007 Sum_probs=203.6
Q ss_pred cchhCCCCCCeeeCcCCcccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccceeecchhccccc
Q 039957 7 TEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNAT 86 (481)
Q Consensus 7 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 86 (481)
.+|.++++|+.++|.. .++.+...+|.++ +|+.+.+..+ ++ .++...+ ...+|+.+.+..+- +..-..+|.++
T Consensus 63 ~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF-~~~~L~~i~lp~~~-~~i~~~~F~~~- 135 (379)
T 4h09_A 63 ANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVF-QGTDLDDFEFPGAT-TEIGNYIFYNS- 135 (379)
T ss_dssp TTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CC-EECTTTT-TTCCCSEEECCTTC-CEECTTTTTTC-
T ss_pred HHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-ee-Eecccee-ccCCcccccCCCcc-ccccccccccc-
Confidence 3699999999999975 4888888899987 7888888755 55 6777777 45689999998764 43555566665
Q ss_pred cCceeecccCcceecCcccccCCCCCCEEEcccccCccccCCCccc----cccccCCCCCCCcEEEccCCccceeCChhh
Q 039957 87 KLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQW----SFLSSLTNCRYLVYLILSGNPLGGILPPSI 162 (481)
Q Consensus 87 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 162 (481)
+|..+.+-. .++.+....|.....++...+..+............ .....+.....+....+..+.- ......+
T Consensus 136 ~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f 213 (379)
T 4h09_A 136 SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGF 213 (379)
T ss_dssp CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTT
T ss_pred eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecccccccccccccccccee-EEeeccc
Confidence 576666654 456577788999999999988766543322111100 0112233444555555544322 2233333
Q ss_pred hhcccCccEEEccCCceeecCCcccccCCCCCeEecccccceecCCcCCcCCCCCCeeecCCCcCCCCCCccccCccCCC
Q 039957 163 GNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLN 242 (481)
Q Consensus 163 ~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~ 242 (481)
... ..++.+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++..|+.+.+..+ +.......|.++.+|+
T Consensus 214 ~~~-~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 214 SYG-KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTC-SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred ccc-cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 333 56888877655 44355667888889999988766 66566778888999999988654 6656667888999999
Q ss_pred eeecCCCeeeecCCcccccCCCCCcEEcCCCcCcccCCcchhccccCcEEEccCcccCCCCCCccccCCc
Q 039957 243 LLHLGGNKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEINLSSNLLNDSLPSNVQKLKV 312 (481)
Q Consensus 243 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 312 (481)
.+.+.++.++.+...+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++.+-..+|.+...
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 9999988888778889999999999999754 66666778889999999888655 55455566766543
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=7.6e-10 Score=106.79 Aligned_cols=187 Identities=14% Similarity=0.193 Sum_probs=94.5
Q ss_pred CCCCeeeCcCCcccc-cC-------ChhccCCcCCCEEEeeCCcCc---------cccChhhhcCCCCccEEEccCccce
Q 039957 13 QNLKSLFLGANNLSG-LI-------PPMIFNISTIRNLNLGGNRLS---------GHLPSMIGHSLPNIKYLELGDNNLI 75 (481)
Q Consensus 13 ~~L~~L~L~~N~l~~-~~-------p~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~~l~~L~~L~L~~N~l~ 75 (481)
..++.|.+......+ .. ..+...+++|+.|.+..+... +.++..+. .+|+|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~-~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLD-AMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHH-TCTTCCEEEEECCBTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHh-cCCCCcEEEEeCCCCc
Confidence 346677777555432 11 223445678888887655321 12333333 6788888888877311
Q ss_pred eecchhccccccCceeecccCcceecCccccc--CCCCCCEEEccc--ccCccccCCCccccccccCCCCCCCcEEEccC
Q 039957 76 GTIPNSITNATKLIILDLGFNTFSGHIPNTFG--NLRHLSVLSLLM--NNLTTESSSAYQWSFLSSLTNCRYLVYLILSG 151 (481)
Q Consensus 76 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 151 (481)
.++. + .+++|+.|++..+.++......+. .+++|++|+|+. |...+.... -.....-.-..+++|++|+|++
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~-~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDM-NVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCG-GGTGGGSCTTTCTTCCEEEEES
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhH-HHHHHHHhcCCCCCcCEEeCCC
Confidence 2232 3 367888888887776644333443 678888888753 221111000 0000000112456777777777
Q ss_pred CccceeCChhhhh--cccCccEEEccCCceeec----CCcccccCCCCCeEecccccce
Q 039957 152 NPLGGILPPSIGN--FSTSLQRFSASECKLKGT----IPKEIGHLRGLIYLSLGFNDLN 204 (481)
Q Consensus 152 N~l~~~~p~~~~~--~~~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 204 (481)
|.++...+..+.. ..++|++|+++.|.+... ++..+..+++|+.|++++|.++
T Consensus 262 ~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 7776433222221 123455555555555432 1222233445555555555443
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=5.6e-10 Score=107.74 Aligned_cols=186 Identities=15% Similarity=0.157 Sum_probs=122.6
Q ss_pred CcchhCCCCCCeeeCcCCccc---------ccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcccee
Q 039957 6 PTEIGNLQNLKSLFLGANNLS---------GLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIG 76 (481)
Q Consensus 6 p~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 76 (481)
..+...+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. + .+++|++|+|..|.+..
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~--~~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K--PRPNLKSLEIISGGLPD 207 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C--BCTTCSEEEEECSBCCH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c--cCCCCcEEEEecCCCCh
Confidence 344667889999999765431 124466778899999999998411 3444 2 38999999999998765
Q ss_pred ecchhcc--ccccCceeeccc--Ccceec-----Ccccc--cCCCCCCEEEcccccCccccCCCccccccccCCCCCCCc
Q 039957 77 TIPNSIT--NATKLIILDLGF--NTFSGH-----IPNTF--GNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLV 145 (481)
Q Consensus 77 ~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~ 145 (481)
..-..+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+....... ...-..+++|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~-----la~a~~~~~L~ 282 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM-----FLESDILPQLE 282 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH-----HHHCSSGGGCS
T ss_pred HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH-----HHhCccCCCCC
Confidence 4434444 789999999974 221111 11223 35899999999999987431111 01113578999
Q ss_pred EEEccCCccceeCC----hhhhhcccCccEEEccCCceeecCCcccccCCCCCeEeccccc
Q 039957 146 YLILSGNPLGGILP----PSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFND 202 (481)
Q Consensus 146 ~L~Ls~N~l~~~~p----~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 202 (481)
+|+|+.|.+++.-+ ..+..+ ++|+.|++++|.++...-..+...- ...++++.++
T Consensus 283 ~LdLs~n~L~d~G~~~L~~~L~~l-~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 283 TMDISAGVLTDEGARLLLDHVDKI-KHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp EEECCSSCCBHHHHHHHHTTHHHH-TTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred EEECCCCCCChHHHHHHHhhcccC-CcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 99999999986432 222333 6899999999988744333333311 3457777776
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=1.6e-09 Score=99.35 Aligned_cols=89 Identities=22% Similarity=0.316 Sum_probs=59.1
Q ss_pred ccCCcCCCE--EEeeCCcCccccChh---hhcCCCCccEEEccCcccee--ecchhccccccCceeecccCcceecCccc
Q 039957 33 IFNISTIRN--LNLGGNRLSGHLPSM---IGHSLPNIKYLELGDNNLIG--TIPNSITNATKLIILDLGFNTFSGHIPNT 105 (481)
Q Consensus 33 ~~~l~~L~~--L~L~~N~l~~~~p~~---~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 105 (481)
|...+.|+. ++++.|+.. .++.. +...+++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444555554 667777543 33322 22357788888888888876 3456677788888888888888765 33
Q ss_pred ccCCC--CCCEEEcccccCcc
Q 039957 106 FGNLR--HLSVLSLLMNNLTT 124 (481)
Q Consensus 106 ~~~l~--~L~~L~L~~N~l~~ 124 (481)
+..+. +|++|+|++|.+++
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGG
T ss_pred hhhcccCCcceEEccCCcCcc
Confidence 44444 88888888888775
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.72 E-value=3.1e-09 Score=92.57 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=75.8
Q ss_pred hhccCCcCCCEEEeeCC-cCccc----cChhhhcCCCCccEEEccCccceee----cchhccccccCceeecccCcceec
Q 039957 31 PMIFNISTIRNLNLGGN-RLSGH----LPSMIGHSLPNIKYLELGDNNLIGT----IPNSITNATKLIILDLGFNTFSGH 101 (481)
Q Consensus 31 ~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 101 (481)
..+...++|++|+|++| .+... +...+. ..++|++|+|++|++... +...+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~-~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALK-TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHT-TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHH-hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 44556677777777777 66521 222332 456777777777776532 334455557788888888877643
Q ss_pred ----CcccccCCCCCCEEEc--ccccCccccCCCccccccccCCCCCCCcEEEccCCccc
Q 039957 102 ----IPNTFGNLRHLSVLSL--LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLG 155 (481)
Q Consensus 102 ----~p~~~~~l~~L~~L~L--~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 155 (481)
+...+...++|++|+| ++|.+....... +...+...+.|++|+|++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~----l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEME----IANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH----HHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH----HHHHHHhCCCcCEEeccCCCCC
Confidence 3556667778888888 778776532111 1133445577888888888875
No 412
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.71 E-value=2.5e-08 Score=92.05 Aligned_cols=130 Identities=14% Similarity=0.078 Sum_probs=92.6
Q ss_pred ccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhc-cCccceeecccCCCC-----cccccCCChhHHh
Q 039957 342 LAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-HQNLIKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 342 ~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
..++.+.||+.... |..+++|............+.+|.++++.+. +..+.++++++...+ ++|++|.++.+..
T Consensus 23 ~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~ 101 (263)
T 3tm0_A 23 EGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY 101 (263)
T ss_dssp SCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHC
T ss_pred cCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhcc
Confidence 34556778988643 6789999876532233346788999988885 556667887766543 5788988887653
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------------------
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGH-------------------------------------------------- 445 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~-------------------------------------------------- 445 (481)
.. ......++.+++++++.||...
T Consensus 102 ~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 175 (263)
T 3tm0_A 102 ED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLK 175 (263)
T ss_dssp CT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHH
T ss_pred CC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHH
Confidence 21 1123468889999999999710
Q ss_pred -----CCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 446 -----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 446 -----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
..+.++|+|++|.||+++++..+.|.||+.|..
T Consensus 176 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 176 TEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766678999998753
No 413
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.70 E-value=3.6e-08 Score=90.75 Aligned_cols=124 Identities=14% Similarity=0.126 Sum_probs=87.9
Q ss_pred cccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccCcc--ceeecccCCCC-----cccccCCChhHHh
Q 039957 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNL--IKILSSCSTPD-----FKFMPNGSLEKRL 415 (481)
Q Consensus 343 ~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~~-----~~~~~~g~l~~~l 415 (481)
.|..+.||+....+|..+++|..... ....+..|+++++.+++..+ .+++++....+ ++|+++.++. .
T Consensus 30 gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 30 GCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp TTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred CCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 45568899988777888999986543 23457789999988875544 45777665543 5688888873 2
Q ss_pred hcCCCccCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------------------
Q 039957 416 YSHNYFLDILERLNIMIDVGSTLEYLHHGH-------------------------------------------------- 445 (481)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~-------------------------------------------------- 445 (481)
.. .+ ...++.++++.++.+|...
T Consensus 105 ~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 177 (264)
T 1nd4_A 105 SH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKAR 177 (264)
T ss_dssp SC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHT
T ss_pred Cc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHh
Confidence 11 11 2357778888888888521
Q ss_pred ----CCCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 446 ----SSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 446 ----~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
....++|+|++|.||+++++..++|.|||.|..
T Consensus 178 ~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 178 MPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 012299999999999998877778999999764
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.63 E-value=6.3e-09 Score=90.63 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCCCccEEEccCc-cceee----cchhccccccCceeecccCcceec----CcccccCCCCCCEEEcccccCccccCCCc
Q 039957 60 SLPNIKYLELGDN-NLIGT----IPNSITNATKLIILDLGFNTFSGH----IPNTFGNLRHLSVLSLLMNNLTTESSSAY 130 (481)
Q Consensus 60 ~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 130 (481)
..++|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|......
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~-- 111 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL-- 111 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH--
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH--
Confidence 4677777777777 66532 334455567777777777777532 334455556777777777777643111
Q ss_pred cccccccCCCCCCCcEEEc--cCCccceeCChhhhhc---ccCccEEEccCCcee
Q 039957 131 QWSFLSSLTNCRYLVYLIL--SGNPLGGILPPSIGNF---STSLQRFSASECKLK 180 (481)
Q Consensus 131 ~~~~~~~l~~l~~L~~L~L--s~N~l~~~~p~~~~~~---~~~L~~L~l~~n~l~ 180 (481)
.+...+...+.|++|+| ++|.|+..-...+... .++|++|++++|.+.
T Consensus 112 --~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 --ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp --HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred --HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 11234555667777777 6777764322222211 146777777777764
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.61 E-value=5.5e-09 Score=95.69 Aligned_cols=69 Identities=26% Similarity=0.341 Sum_probs=39.7
Q ss_pred cccccCceeecccCccee--cCcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccceeCC
Q 039957 83 TNATKLIILDLGFNTFSG--HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP 159 (481)
Q Consensus 83 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 159 (481)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+++.. +..+..+ +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~-------l~~l~~l-~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERE-------LDKIKGL-KLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGG-------GGGGTTS-CCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchh-------hhhcccC-CcceEEccCCcCccccC
Confidence 456667777777776665 334555666666777776666665411 1122233 56666666666655443
No 416
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.44 E-value=4.6e-07 Score=87.68 Aligned_cols=132 Identities=14% Similarity=0.220 Sum_probs=90.3
Q ss_pred cccccceeeeeccCCcceEEEEEe--ccc-hhhhhhhhHHHHHhhhhcc--CccceeecccCCCC--------cccccCC
Q 039957 343 AGSFGSVYKGTISDGTDVAIKIFN--LQR-ERAFRSFNSECEVLRNVRH--QNLIKILSSCSTPD--------FKFMPNG 409 (481)
Q Consensus 343 ~g~~g~vy~~~l~~g~~vavK~l~--~~~-~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~--------~~~~~~g 409 (481)
.|.++.+|+....+ ..+.+|+.. ... ......+.+|.++++.++. ..+.+++++|.... ++|+++.
T Consensus 48 ~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~ 126 (359)
T 3dxp_A 48 GGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGR 126 (359)
T ss_dssp C-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCB
T ss_pred CcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCe
Confidence 46778899887654 466677654 221 1223467789999988874 45678888876652 4678877
Q ss_pred ChhHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------------
Q 039957 410 SLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH-------------------------------------------- 445 (481)
Q Consensus 410 ~l~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~-------------------------------------------- 445 (481)
.+.+... ..++..++..++.+++++|+.||...
T Consensus 127 ~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (359)
T 3dxp_A 127 VLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDW 203 (359)
T ss_dssp CCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHH
T ss_pred ecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHH
Confidence 7643211 12456778889999999999999621
Q ss_pred ----------CCCCeeeCCCCCCCeeeCCCCc--EEEccccCccc
Q 039957 446 ----------SSAPIIHCDLKPTSILLDENMV--AHVSDFGISKL 478 (481)
Q Consensus 446 ----------~~~~i~H~dlk~~nill~~~~~--~kl~Dfgl~~~ 478 (481)
....+||+|+++.||++++++. +.|.||+.|..
T Consensus 204 l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 204 LPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp GGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 0256999999999999998753 68999999864
No 417
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.93 E-value=5.6e-06 Score=70.25 Aligned_cols=85 Identities=8% Similarity=0.036 Sum_probs=57.0
Q ss_pred CcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCcc-ceeecchhcccc----ccCceeecccCc-ceecCcccccCC
Q 039957 36 ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNN-LIGTIPNSITNA----TKLIILDLGFNT-FSGHIPNTFGNL 109 (481)
Q Consensus 36 l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l 109 (481)
-.+|++||++++.++..--..+. .+++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..-=..+..+
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~-~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~ 138 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHME-GLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHF 138 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGT-TCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGC
T ss_pred CceEeEEeCcCCCccHHHHHHhc-CCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcC
Confidence 34688888888887643223343 68888888888885 543222334443 468899998874 765444457788
Q ss_pred CCCCEEEccccc
Q 039957 110 RHLSVLSLLMNN 121 (481)
Q Consensus 110 ~~L~~L~L~~N~ 121 (481)
++|++|++++..
T Consensus 139 ~~L~~L~L~~c~ 150 (176)
T 3e4g_A 139 RNLKYLFLSDLP 150 (176)
T ss_dssp TTCCEEEEESCT
T ss_pred CCCCEEECCCCC
Confidence 999999998764
No 418
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.74 E-value=0.0001 Score=69.12 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=80.1
Q ss_pred cccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhc-cCc--cceeecccCCCC--------cccccCCCh
Q 039957 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR-HQN--LIKILSSCSTPD--------FKFMPNGSL 411 (481)
Q Consensus 343 ~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~--------~~~~~~g~l 411 (481)
.|....+|+.. ..+.+|..... .....+..|.++++.+. +.. +.++++.+...+ ++++++.++
T Consensus 30 ~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l 103 (304)
T 3sg8_A 30 EGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPL 103 (304)
T ss_dssp ECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEEC
T ss_pred CCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeEC
Confidence 45556677753 45778875432 23456778898888774 322 234444433222 344777776
Q ss_pred hHHhhcCCCccCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 039957 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG----------------------------------------------- 444 (481)
Q Consensus 412 ~~~l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~----------------------------------------------- 444 (481)
.+.... .++..++..++.++++.++.||..
T Consensus 104 ~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 180 (304)
T 3sg8_A 104 TPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDI 180 (304)
T ss_dssp CHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred Cccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHH
Confidence 543221 234456667777777777777741
Q ss_pred -------CCCCCeeeCCCCCCCeeeCC--CCcEEEccccCccc
Q 039957 445 -------HSSAPIIHCDLKPTSILLDE--NMVAHVSDFGISKL 478 (481)
Q Consensus 445 -------~~~~~i~H~dlk~~nill~~--~~~~kl~Dfgl~~~ 478 (481)
...+.++|+|++|.||++++ ...+.|.||+.+..
T Consensus 181 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 181 LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 11245899999999999998 56689999998764
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.71 E-value=2.5e-05 Score=66.23 Aligned_cols=84 Identities=15% Similarity=0.221 Sum_probs=58.2
Q ss_pred CCccEEEccCccceeecchhccccccCceeecccCc-ceecCcccccCC----CCCCEEEccccc-CccccCCCcccccc
Q 039957 62 PNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNT-FSGHIPNTFGNL----RHLSVLSLLMNN-LTTESSSAYQWSFL 135 (481)
Q Consensus 62 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~~~~ 135 (481)
..|++||++++.++..--..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. +|... .
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G--------l 132 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG--------I 132 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH--------H
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH--------H
Confidence 468888888888765444556788888888888884 654333345554 368888888874 55321 1
Q ss_pred ccCCCCCCCcEEEccCCc
Q 039957 136 SSLTNCRYLVYLILSGNP 153 (481)
Q Consensus 136 ~~l~~l~~L~~L~Ls~N~ 153 (481)
..+..+++|++|+|+++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 345667888888888875
No 420
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.71 E-value=0.00018 Score=68.01 Aligned_cols=126 Identities=17% Similarity=0.228 Sum_probs=81.0
Q ss_pred cccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhcc----CccceeecccCCC--CcccccCCChhHHhh
Q 039957 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRH----QNLIKILSSCSTP--DFKFMPNGSLEKRLY 416 (481)
Q Consensus 343 ~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~--~~~~~~~g~l~~~l~ 416 (481)
.|....+|+. |..+++|..... .....+..|.+++..+.+ ..+.+++++ ... -++|+++.++.+...
T Consensus 47 ~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-~~~~lvme~i~G~~l~~~~~ 119 (320)
T 3r70_A 47 SGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ-SDRFNIMKYIKGERITYEQY 119 (320)
T ss_dssp ECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-CSSCEEEECCCCBCCCHHHH
T ss_pred CCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec-CCcEEEEeecCCcccccccc
Confidence 4666678876 667888875332 223347788888888765 122344443 111 267888888763321
Q ss_pred cCCCccCHHHHHHHHHHHHHHHHHHhcCCC--------------------------------------------------
Q 039957 417 SHNYFLDILERLNIMIDVGSTLEYLHHGHS-------------------------------------------------- 446 (481)
Q Consensus 417 ~~~~~~~~~~~~~i~~~ia~~l~~lH~~~~-------------------------------------------------- 446 (481)
. .++..++..++.++++.++.||....
T Consensus 120 ~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
T 3r70_A 120 H---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENI 196 (320)
T ss_dssp T---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred c---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHH
Confidence 1 13445566677777777777774221
Q ss_pred ---------CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 ---------SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ---------~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
.+.++|+|++|.||+++++..+.|.||+.|..
T Consensus 197 l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 197 LSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 13459999999999999976779999998864
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.48 E-value=0.00049 Score=63.90 Aligned_cols=134 Identities=16% Similarity=0.082 Sum_probs=81.6
Q ss_pred ccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccC---ccceeecccCC-CCcccccCCChhH----
Q 039957 342 LAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ---NLIKILSSCST-PDFKFMPNGSLEK---- 413 (481)
Q Consensus 342 ~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~-~~~~~~~~g~l~~---- 413 (481)
..|.++.+|+....+|..+++|............+..|++.++.+++. .+.+++++... --++|++++++..
T Consensus 24 ~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~~~lvme~l~g~~~~~~~~~ 103 (288)
T 3d1u_A 24 GHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERPPTPEAAE 103 (288)
T ss_dssp EEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCCCCHHHHH
T ss_pred CCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEecCcEEEEEecccCCCChHHHH
Confidence 357778999999888999999986433222335678999999999875 45666665321 1267888776421
Q ss_pred -------HhhcCC--------------------CccCHHHHH---HH-----------------HHHHHHHHHHHhc---
Q 039957 414 -------RLYSHN--------------------YFLDILERL---NI-----------------MIDVGSTLEYLHH--- 443 (481)
Q Consensus 414 -------~l~~~~--------------------~~~~~~~~~---~i-----------------~~~ia~~l~~lH~--- 443 (481)
.+|... ..-+|.+.. ++ ...+.+.++.+.+
T Consensus 104 ~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~~l~~~l~ 183 (288)
T 3d1u_A 104 RFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLDALDHLAG 183 (288)
T ss_dssp HHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHTC
T ss_pred HHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 122210 012454321 11 1111222233321
Q ss_pred CCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 444 GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 444 ~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
....+.++|+|+.+.||++++ +.+.|.|| .+.
T Consensus 184 ~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 184 DPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp SCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred CCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 112567999999999999988 45889999 654
No 422
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.40 E-value=0.00088 Score=62.84 Aligned_cols=126 Identities=14% Similarity=0.140 Sum_probs=72.7
Q ss_pred ccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhccC---ccceeecccCC-CC-----cccccCCChhHH
Q 039957 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ---NLIKILSSCST-PD-----FKFMPNGSLEKR 414 (481)
Q Consensus 344 g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~-~~-----~~~~~~g~l~~~ 414 (481)
|....+|+. |..+.+|.... ......+..|.+++..+.+. -+.+++.++.. .+ ++|+++.++.+.
T Consensus 30 G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~ 103 (306)
T 3tdw_A 30 GFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGED 103 (306)
T ss_dssp CSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHH
T ss_pred CcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchh
Confidence 444567775 56778887422 22345678899999988753 23345555431 11 567777766542
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------------
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHHGH------------------------------------------------- 445 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~~~------------------------------------------------- 445 (481)
... .++..++..++.++++.++.||...
T Consensus 104 ~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l 180 (306)
T 3tdw_A 104 GMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYM 180 (306)
T ss_dssp HHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHH
T ss_pred hhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 110 0122223333333333333333210
Q ss_pred -------CCCCeeeCCCCCCCeeeCC---CCc-EEEccccCccc
Q 039957 446 -------SSAPIIHCDLKPTSILLDE---NMV-AHVSDFGISKL 478 (481)
Q Consensus 446 -------~~~~i~H~dlk~~nill~~---~~~-~kl~Dfgl~~~ 478 (481)
..+.++|+|+++.||++++ ++. +.|.||+.+..
T Consensus 181 ~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 181 THPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1346799999999999987 455 48999998764
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.38 E-value=8.7e-05 Score=64.17 Aligned_cols=121 Identities=10% Similarity=0.115 Sum_probs=66.1
Q ss_pred ccCCcCCCEEEeeCC-cCcc----ccChhhhcCCCCccEEEccCccceee----cchhccccccCceeecccCcceec--
Q 039957 33 IFNISTIRNLNLGGN-RLSG----HLPSMIGHSLPNIKYLELGDNNLIGT----IPNSITNATKLIILDLGFNTFSGH-- 101 (481)
Q Consensus 33 ~~~l~~L~~L~L~~N-~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 101 (481)
+.+-+.|++|+|++| +|.. .+-..+. .-+.|++|+|++|+|... +...+..-+.|+.|+|+.|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~-~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAAC-NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHT-TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHh-hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 445566777777764 5531 1223332 346677777777776532 233344557777777777777632
Q ss_pred --CcccccCCCCCCEEEcccccCccccCCCccccccccCCCCCCCcEEEccCCccc
Q 039957 102 --IPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLG 155 (481)
Q Consensus 102 --~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 155 (481)
+-+++..-+.|++|+|++|....+.... ...+...+..-+.|+.|+++.|.+.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g-~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQV-EMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHH-HHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHH-HHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2334555567888888765321110000 0001123344567888888877654
No 424
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=0.00013 Score=63.15 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=48.4
Q ss_pred CCCCccEEEccCc-cceee----cchhccccccCceeecccCcceec----CcccccCCCCCCEEEcccccCccccCCCc
Q 039957 60 SLPNIKYLELGDN-NLIGT----IPNSITNATKLIILDLGFNTFSGH----IPNTFGNLRHLSVLSLLMNNLTTESSSAY 130 (481)
Q Consensus 60 ~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 130 (481)
.-+.|++|+|++| +|... +-..+..-+.|+.|+|++|.|... +.+.+..-+.|++|+|++|+|......
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~-- 116 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA-- 116 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH--
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH--
Confidence 3467778888775 55321 334455566777777777777632 223344456677777777766543111
Q ss_pred cccccccCCCCCCCcEEEccCC
Q 039957 131 QWSFLSSLTNCRYLVYLILSGN 152 (481)
Q Consensus 131 ~~~~~~~l~~l~~L~~L~Ls~N 152 (481)
.+...+..-+.|++|+|++|
T Consensus 117 --ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 --RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp --HHHHHTTTTCCCSEEECCCC
T ss_pred --HHHHHHhhCCceeEEECCCC
Confidence 11123444445666666543
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.08 E-value=0.00091 Score=64.17 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=26.8
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
.+.++|+|+.+.||+++++..+.|.||+.|..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 35689999999999999655579999998754
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.05 E-value=0.00058 Score=55.00 Aligned_cols=33 Identities=24% Similarity=0.145 Sum_probs=12.7
Q ss_pred eeecccCcceecCcccccCCCCCCEEEcccccC
Q 039957 90 ILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNL 122 (481)
Q Consensus 90 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 122 (481)
.|+|++|+|+.+.+..|..+++|++|+|++|.+
T Consensus 35 ~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 35 ELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 333333333333333333444444444444433
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.95 E-value=0.0011 Score=53.40 Aligned_cols=55 Identities=27% Similarity=0.405 Sum_probs=26.0
Q ss_pred eeeCcCCccc-ccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccCccc
Q 039957 17 SLFLGANNLS-GLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL 74 (481)
Q Consensus 17 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l 74 (481)
+++.+++.++ ..+|..+ -++|++|+|++|+|+ .+|...+..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 4555555554 1223221 123555555555555 44444444455555555555544
No 428
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=96.90 E-value=0.0044 Score=56.70 Aligned_cols=123 Identities=18% Similarity=0.146 Sum_probs=73.9
Q ss_pred ceeeeecc-CCcceEEEEEeccchhhhhhhhHHHHHhhhhcc-CccceeecccCCCC-----cccccCCChhHHhhcCCC
Q 039957 348 SVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRH-QNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNY 420 (481)
Q Consensus 348 ~vy~~~l~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~-----~~~~~~g~l~~~l~~~~~ 420 (481)
.+|+.... ++..+.+|.-... ....+..|.+.++.+.. --+.++++++...+ ++++++.++.+.....
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~-- 114 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY-- 114 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC--
T ss_pred eEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC--
Confidence 47876544 4567788875432 23456778888877642 12446666666554 5677776665433211
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhcC------------------------------------------------------CC
Q 039957 421 FLDILERLNIMIDVGSTLEYLHHG------------------------------------------------------HS 446 (481)
Q Consensus 421 ~~~~~~~~~i~~~ia~~l~~lH~~------------------------------------------------------~~ 446 (481)
...+..++.++++.++-||.. ..
T Consensus 115 ---~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 191 (272)
T 4gkh_A 115 ---PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSP 191 (272)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCC
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccC
Confidence 011223344444444444421 00
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 192 ~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 192 DSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999888788999998764
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=96.84 E-value=0.0016 Score=62.61 Aligned_cols=31 Identities=19% Similarity=0.435 Sum_probs=27.6
Q ss_pred CCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 448 APIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 448 ~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
+.++|+|+++.||++++...+.|.||+.+..
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 5689999999999998888889999998764
No 430
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.08 E-value=0.026 Score=54.74 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=26.2
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
.+.++|+|+.+.||+++++ .+++.||..|..
T Consensus 226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 3579999999999999876 489999987754
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=95.79 E-value=0.03 Score=51.65 Aligned_cols=46 Identities=17% Similarity=0.099 Sum_probs=33.6
Q ss_pred ccccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhc
Q 039957 342 LAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR 387 (481)
Q Consensus 342 ~~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~ 387 (481)
+.|..+.+|+.++.||..+.+|+...........|..|.+.|+.+.
T Consensus 24 g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 24 GHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLG 69 (288)
T ss_dssp EEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred CCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence 4577788999999999999999764333333345678888888774
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.02 E-value=0.046 Score=50.72 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=25.7
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
...++|+|+.+.||+ .+++.+.+.||..|..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5667789999998754
No 433
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=94.50 E-value=0.036 Score=52.32 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=28.7
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
...+||+|+++.||+++.++.+.|.||+.|..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 46799999999999998888999999998753
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=94.09 E-value=0.053 Score=53.18 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=25.0
Q ss_pred CCeeeCCCCCCCeeeCCC----------------------------CcEEEccccCcc
Q 039957 448 APIIHCDLKPTSILLDEN----------------------------MVAHVSDFGISK 477 (481)
Q Consensus 448 ~~i~H~dlk~~nill~~~----------------------------~~~kl~Dfgl~~ 477 (481)
..++|+|+.+.|||++++ +.+.|.||..|.
T Consensus 249 ~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~ 306 (429)
T 1nw1_A 249 VTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS 306 (429)
T ss_dssp EEEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred eEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence 468999999999999875 679999998875
No 435
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=92.70 E-value=1.1 Score=41.45 Aligned_cols=127 Identities=12% Similarity=0.096 Sum_probs=73.2
Q ss_pred cccccceeeeeccCCcceEEEEEeccchhhhhhhhHHHHHhhhhcc---CccceeecccCCCC-----cccccCCChh--
Q 039957 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRH---QNLIKILSSCSTPD-----FKFMPNGSLE-- 412 (481)
Q Consensus 343 ~g~~g~vy~~~l~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~-----~~~~~~g~l~-- 412 (481)
.|....+|+... ++..+.+|..... ....+..|.+.++.+.. .-+.++++++...+ ++|+++..+.
T Consensus 46 gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~~~ 121 (312)
T 3jr1_A 46 SGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQS 121 (312)
T ss_dssp CSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCCTT
T ss_pred CccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCCch
Confidence 456677888765 4567778876532 23456778888877742 34556666654433 5677765441
Q ss_pred ------H---HhhcCCC---------------------ccCHHHHH---HHHHH----------------HH-HHHHHHh
Q 039957 413 ------K---RLYSHNY---------------------FLDILERL---NIMID----------------VG-STLEYLH 442 (481)
Q Consensus 413 ------~---~l~~~~~---------------------~~~~~~~~---~i~~~----------------ia-~~l~~lH 442 (481)
+ .+|.... .-+|.+.. ++..+ +. +..+.|.
T Consensus 122 ~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~L~ 201 (312)
T 3jr1_A 122 SFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLS 201 (312)
T ss_dssp HHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhc
Confidence 1 1222100 12464322 11111 11 1223443
Q ss_pred cCCCCCCeeeCCCCCCCeeeCCCCcEEEcccc
Q 039957 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFG 474 (481)
Q Consensus 443 ~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfg 474 (481)
.....+.+||+|+.+.|++++.++ +.|.||+
T Consensus 202 ~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 202 KHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp TCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred cCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 212257799999999999999887 8899984
No 436
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=91.69 E-value=0.18 Score=49.23 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=27.5
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
.+.++|+|+++.||++++++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 56799999999999998876 99999998764
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=88.94 E-value=0.5 Score=44.26 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=27.7
Q ss_pred CCCeeeCCCCCCCeeeCCC----CcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDEN----MVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~----~~~kl~Dfgl~~~ 478 (481)
...+||+|+.+.||+++++ ..+.|.||+.|..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4579999999999999875 7899999998764
No 438
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=87.71 E-value=0.19 Score=46.82 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=26.8
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
...++|+|+.+.||+++++..+.|.||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3578999999999999987667899999875
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=87.70 E-value=0.51 Score=44.00 Aligned_cols=30 Identities=17% Similarity=0.173 Sum_probs=25.8
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
...++|+|+++.||+++ + .+.|.||+.|..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 35689999999999999 4 899999988754
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=86.67 E-value=0.34 Score=45.66 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=28.2
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
...++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999987754
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=82.81 E-value=0.59 Score=44.50 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.9
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccCcc
Q 039957 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISK 477 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~ 477 (481)
...++|+|+++.||+++++. +.|.||..|.
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 34689999999999998655 8999998775
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=82.64 E-value=1.3 Score=43.62 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=26.6
Q ss_pred CCCeeeCCCCCCCeeeC-------------------------------------CCCcEEEccccCcc
Q 039957 447 SAPIIHCDLKPTSILLD-------------------------------------ENMVAHVSDFGISK 477 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~-------------------------------------~~~~~kl~Dfgl~~ 477 (481)
...++|+|+.+.|||++ +++.+.|.||..|.
T Consensus 289 ~~v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lIDfEya~ 356 (458)
T 2qg7_A 289 PIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGETGEGGEGDSISFIDFEYSC 356 (458)
T ss_dssp CEEEECSCCCGGGEEECCC-----------------------------------CCCCEEECCCTTCE
T ss_pred CeeEEecCCCCCcEEeecccccccccccccccccccccccccccccccccccCCCCCeEEEEeecCCC
Confidence 34689999999999998 46789999998875
No 443
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=80.19 E-value=1.6 Score=41.80 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=27.7
Q ss_pred CCCeeeCCCCCCCeeeCCC----CcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDEN----MVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~----~~~kl~Dfgl~~~ 478 (481)
...++|+|+.+.||+++++ +.+.+.||..|..
T Consensus 219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 4568999999999999876 7899999998753
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=79.45 E-value=1.7 Score=41.89 Aligned_cols=32 Identities=28% Similarity=0.273 Sum_probs=27.8
Q ss_pred CCCeeeCCCCCCCeeeCCC------CcEEEccccCccc
Q 039957 447 SAPIIHCDLKPTSILLDEN------MVAHVSDFGISKL 478 (481)
Q Consensus 447 ~~~i~H~dlk~~nill~~~------~~~kl~Dfgl~~~ 478 (481)
...++|+|+.+.||+++++ +.+.+.||..|..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 4568999999999999887 7999999998753
No 445
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.93 E-value=2.8 Score=36.41 Aligned_cols=52 Identities=13% Similarity=0.252 Sum_probs=42.9
Q ss_pred cCHHHHHHHHHHHHHHHH-HHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 422 LDILERLNIMIDVGSTLE-YLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 422 ~~~~~~~~i~~~ia~~l~-~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
.+..+|++.+..++...+ +++. -+|--+.|+||.+|.++.|++.-.|+-..+
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~~------r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSAR------RLIFIVCPENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCSS------SEECCCCGGGEEECTTCCEEESCCEETTTB
T ss_pred cCHHHHHHHHHHHHHHHHHhhhC------ceeEEEeCceEEEeCCCcEEEEEcCCcccC
Confidence 567889999999988776 5652 357788899999999999999999986554
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=67.11 E-value=2.5 Score=41.07 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=26.6
Q ss_pred CCeeeCCCCCCCeeeCCCCcEEEccccCccc
Q 039957 448 APIIHCDLKPTSILLDENMVAHVSDFGISKL 478 (481)
Q Consensus 448 ~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~ 478 (481)
..++|+|+.+.||+ ++++.+.+.||..|..
T Consensus 262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 46899999999999 8889999999998753
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=67.08 E-value=3.8 Score=35.39 Aligned_cols=53 Identities=11% Similarity=0.200 Sum_probs=43.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhcCCCCCCeeeCCCCCCCeeeCCCCcEEEccccCcccC
Q 039957 421 FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479 (481)
Q Consensus 421 ~~~~~~~~~i~~~ia~~l~~lH~~~~~~~i~H~dlk~~nill~~~~~~kl~Dfgl~~~~ 479 (481)
..+...+++++..|+...++++. =+|--+.|+||.+|.++.|++.=.|+...+
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~------r~tf~L~P~NL~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRT------RYTFVLAPDELFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGS------SEECCCSGGGEEECTTSCEEESCCEETTTB
T ss_pred hcCHHHHHHHHHHHHHHHHHhcC------ceEEEEecceEEEcCCCCEEEEEccCccCC
Confidence 35678999999999988876662 257788999999999999999999985543
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=66.33 E-value=3.1 Score=40.03 Aligned_cols=29 Identities=31% Similarity=0.372 Sum_probs=24.8
Q ss_pred eeeCCCCCCCeee------CCCCcEEEccccCccc
Q 039957 450 IIHCDLKPTSILL------DENMVAHVSDFGISKL 478 (481)
Q Consensus 450 i~H~dlk~~nill------~~~~~~kl~Dfgl~~~ 478 (481)
++|+|+.+.||++ +++..+++.||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998753
No 449
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.04 E-value=28 Score=25.67 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=26.1
Q ss_pred cccccCChhccCCcCCCEEEeeCCcCccccChhhhcCCCCccEEEccC
Q 039957 24 NLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71 (481)
Q Consensus 24 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~ 71 (481)
.++.+-..+|.++++|+.+.+..+ ++ .|....|....+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcC
Confidence 455555666777777776666554 33 34444444555666655554
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.90 E-value=70 Score=23.47 Aligned_cols=37 Identities=8% Similarity=-0.013 Sum_probs=15.3
Q ss_pred cCCcCCCCCCeeecCCCcCCCCCCccccCccCCCeeec
Q 039957 209 TSIGTLKQLQGFFLPETNLQGYVPHNLCHLEMLNLLHL 246 (481)
Q Consensus 209 ~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 246 (481)
..|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+.+
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 34444444444444332 22223334444444444444
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=34.34 E-value=7.3 Score=38.23 Aligned_cols=52 Identities=12% Similarity=0.073 Sum_probs=11.6
Q ss_pred ccceeeeeccC-CcceEE------EEEeccc--hhhhhhhhHHHHHhhhhccCccceeecc
Q 039957 346 FGSVYKGTISD-GTDVAI------KIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397 (481)
Q Consensus 346 ~g~vy~~~l~~-g~~vav------K~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~ 397 (481)
||.||+|.+.. ..+||| |...... ......+.+|..+..+.+|+|+++..++
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f 212 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNF 212 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcce
Confidence 99999998754 357887 6543321 1122356677788888899999987654
No 452
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=21.44 E-value=1.2e+02 Score=28.49 Aligned_cols=89 Identities=9% Similarity=0.228 Sum_probs=48.8
Q ss_pred cccceeeeeccC--------CcceEEEEEeccchhhhhhhhHHHHHhhhhccCcc-ceeecccCCCC-cccccCCChhHH
Q 039957 345 SFGSVYKGTISD--------GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNL-IKILSSCSTPD-FKFMPNGSLEKR 414 (481)
Q Consensus 345 ~~g~vy~~~l~~--------g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~-~~~~~~g~l~~~ 414 (481)
.-..+|+...++ +..+.+|+.... ........+|.++++.+....+ .++++.+..+- ++|+++.++...
T Consensus 62 ~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g~v~e~i~G~~l~~~ 140 (379)
T 3feg_A 62 LSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQ 140 (379)
T ss_dssp --CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCSEEECCGG
T ss_pred ccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccEEEEecCccCChh
Confidence 344567766542 356777775321 1123344578888877753333 35666655431 567776554321
Q ss_pred hhcCCCccCHHHHHHHHHHHHHHHHHHhc
Q 039957 415 LYSHNYFLDILERLNIMIDVGSTLEYLHH 443 (481)
Q Consensus 415 l~~~~~~~~~~~~~~i~~~ia~~l~~lH~ 443 (481)
.. ....+...+|+.|+-||.
T Consensus 141 -----~l----~~p~~~~~ia~~La~LH~ 160 (379)
T 3feg_A 141 -----EL----REPVLSAAIATKMAQFHG 160 (379)
T ss_dssp -----GG----GCHHHHHHHHHHHHHHHT
T ss_pred -----Hh----CCHHHHHHHHHHHHHHhC
Confidence 00 113467789999999995
Done!