Query 039959
Match_columns 439
No_of_seqs 301 out of 1982
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:43:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039959.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039959hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02793 Probable polygalactur 100.0 8.5E-82 1.9E-86 643.2 50.1 371 57-439 49-423 (443)
2 PLN02155 polygalacturonase 100.0 2.1E-81 4.5E-86 630.9 46.9 367 57-439 24-392 (394)
3 PLN02218 polygalacturonase ADP 100.0 4.3E-81 9.3E-86 635.2 46.7 366 55-438 62-430 (431)
4 PLN02188 polygalacturonase/gly 100.0 1.4E-80 3E-85 627.5 42.6 368 57-438 33-403 (404)
5 PLN03003 Probable polygalactur 100.0 2.3E-79 4.9E-84 620.6 44.4 363 57-439 20-389 (456)
6 PLN03010 polygalacturonase 100.0 7E-78 1.5E-82 606.5 48.4 356 57-439 43-403 (409)
7 PF00295 Glyco_hydro_28: Glyco 100.0 3.4E-59 7.4E-64 464.4 32.6 323 94-428 1-323 (326)
8 COG5434 PGU1 Endopygalactoruna 100.0 4.8E-42 1E-46 352.7 27.6 279 55-352 77-405 (542)
9 TIGR03808 RR_plus_rpt_1 twin-a 99.9 1.1E-24 2.3E-29 217.9 24.2 250 54-344 31-337 (455)
10 PF12708 Pectate_lyase_3: Pect 99.9 2.5E-20 5.4E-25 175.2 21.1 213 60-319 1-224 (225)
11 PLN02793 Probable polygalactur 99.9 5.6E-19 1.2E-23 181.3 29.3 220 123-385 143-397 (443)
12 PLN02188 polygalacturonase/gly 99.8 1.7E-18 3.7E-23 175.8 28.9 222 123-385 122-377 (404)
13 PLN03010 polygalacturonase 99.8 6.4E-18 1.4E-22 171.3 30.6 198 192-415 131-351 (409)
14 PLN02218 polygalacturonase ADP 99.8 4.4E-18 9.6E-23 173.9 29.4 198 192-415 148-385 (431)
15 PLN03003 Probable polygalactur 99.8 6.2E-18 1.3E-22 172.6 29.3 198 192-415 105-334 (456)
16 PLN02155 polygalacturonase 99.8 1.1E-17 2.4E-22 169.2 28.9 220 123-385 115-366 (394)
17 PF00295 Glyco_hydro_28: Glyco 99.8 3.1E-18 6.8E-23 170.7 24.1 218 124-384 61-310 (326)
18 PF03718 Glyco_hydro_49: Glyco 99.8 3.7E-16 8E-21 158.1 28.1 272 99-413 232-554 (582)
19 TIGR03805 beta_helix_1 paralle 99.7 1.7E-14 3.7E-19 142.8 22.0 196 86-344 1-202 (314)
20 COG5434 PGU1 Endopygalactoruna 99.4 2.9E-12 6.3E-17 133.0 15.9 154 213-385 237-398 (542)
21 TIGR03805 beta_helix_1 paralle 98.7 3.8E-06 8.3E-11 83.4 21.7 153 193-352 79-250 (314)
22 PF12541 DUF3737: Protein of u 98.6 2.9E-07 6.2E-12 86.5 11.6 125 195-348 93-228 (277)
23 PF13229 Beta_helix: Right han 98.6 5.1E-07 1.1E-11 79.3 12.8 140 193-352 2-145 (158)
24 smart00656 Amb_all Amb_all dom 98.5 3.4E-06 7.3E-11 77.7 16.0 121 216-346 33-167 (190)
25 COG3866 PelB Pectate lyase [Ca 98.5 7.5E-06 1.6E-10 78.4 16.5 122 194-315 95-229 (345)
26 TIGR03808 RR_plus_rpt_1 twin-a 98.4 9E-06 2E-10 82.6 16.9 144 193-350 108-289 (455)
27 PRK10123 wcaM putative colanic 98.4 2.1E-05 4.5E-10 74.8 16.5 286 57-415 31-351 (464)
28 PF13229 Beta_helix: Right han 98.3 7.7E-06 1.7E-10 71.7 12.6 117 192-321 24-144 (158)
29 PF12541 DUF3737: Protein of u 98.3 9.1E-06 2E-10 76.6 11.9 99 196-321 133-231 (277)
30 PF14592 Chondroitinas_B: Chon 98.3 0.00015 3.3E-09 73.7 21.1 46 82-130 3-49 (425)
31 PF07602 DUF1565: Protein of u 98.2 0.00019 4.1E-09 68.3 18.5 40 83-130 15-59 (246)
32 PF05048 NosD: Periplasmic cop 98.2 8.4E-05 1.8E-09 70.7 16.5 113 193-321 37-151 (236)
33 PF05048 NosD: Periplasmic cop 98.1 9E-05 1.9E-09 70.5 15.6 135 192-350 14-150 (236)
34 PF00544 Pec_lyase_C: Pectate 98.1 9.9E-06 2.2E-10 75.3 8.6 94 221-315 44-158 (200)
35 PF03718 Glyco_hydro_49: Glyco 98.1 8.6E-05 1.9E-09 76.5 15.0 174 216-412 322-514 (582)
36 PLN02480 Probable pectinestera 98.1 0.00095 2.1E-08 66.7 22.1 130 198-345 130-277 (343)
37 COG3866 PelB Pectate lyase [Ca 98.1 0.00031 6.8E-09 67.5 17.5 176 126-349 78-280 (345)
38 PRK10531 acyl-CoA thioesterase 97.9 0.0049 1.1E-07 63.0 24.5 141 194-346 200-377 (422)
39 PLN02176 putative pectinestera 97.8 0.013 2.8E-07 58.6 25.1 199 83-345 51-271 (340)
40 PF12708 Pectate_lyase_3: Pect 97.8 0.0018 4E-08 60.3 17.7 123 202-349 94-224 (225)
41 smart00656 Amb_all Amb_all dom 97.8 0.0024 5.2E-08 58.8 17.9 135 193-345 33-189 (190)
42 PLN02634 probable pectinestera 97.8 0.019 4.1E-07 57.6 24.8 131 198-345 147-291 (359)
43 PLN02682 pectinesterase family 97.7 0.011 2.4E-07 59.5 23.1 212 83-348 82-308 (369)
44 PLN02665 pectinesterase family 97.7 0.02 4.4E-07 57.7 24.7 206 83-348 80-301 (366)
45 COG3420 NosD Nitrous oxidase a 97.7 0.011 2.3E-07 58.0 21.5 120 147-283 69-191 (408)
46 PLN02773 pectinesterase 97.6 0.022 4.7E-07 56.5 22.2 135 195-345 97-240 (317)
47 PLN02170 probable pectinestera 97.4 0.04 8.6E-07 58.1 21.8 206 83-348 237-455 (529)
48 PLN02304 probable pectinestera 97.3 0.065 1.4E-06 54.2 22.0 203 83-345 87-312 (379)
49 PLN02916 pectinesterase family 97.3 0.057 1.2E-06 56.6 21.9 210 83-348 199-429 (502)
50 PLN02671 pectinesterase 97.3 0.069 1.5E-06 53.7 21.7 136 196-348 150-298 (359)
51 PLN02432 putative pectinestera 97.3 0.073 1.6E-06 52.2 21.3 132 197-345 91-230 (293)
52 PLN02708 Probable pectinestera 97.2 0.041 8.8E-07 58.7 20.2 150 83-283 253-409 (553)
53 PLN02933 Probable pectinestera 97.1 0.11 2.5E-06 54.8 22.2 210 83-348 230-457 (530)
54 PLN02497 probable pectinestera 97.1 0.2 4.3E-06 50.0 22.7 133 197-346 112-265 (331)
55 PF01095 Pectinesterase: Pecti 97.1 0.018 4E-07 56.7 15.5 205 83-348 12-239 (298)
56 PLN02745 Putative pectinestera 97.1 0.08 1.7E-06 57.0 21.1 211 83-348 297-524 (596)
57 PLN02995 Probable pectinestera 97.1 0.063 1.4E-06 57.1 20.1 212 83-348 235-464 (539)
58 PLN02484 probable pectinestera 97.1 0.13 2.8E-06 55.3 22.3 211 83-348 284-512 (587)
59 PLN02468 putative pectinestera 97.0 0.088 1.9E-06 56.4 20.8 210 83-348 270-493 (565)
60 PF00544 Pec_lyase_C: Pectate 97.0 0.013 2.9E-07 54.4 12.9 118 194-321 39-187 (200)
61 PLN02201 probable pectinestera 97.0 0.12 2.6E-06 54.7 21.3 210 83-348 218-445 (520)
62 PLN02713 Probable pectinestera 97.0 0.052 1.1E-06 58.1 18.8 210 83-348 262-492 (566)
63 PLN02506 putative pectinestera 97.0 0.077 1.7E-06 56.4 19.5 206 83-348 244-462 (537)
64 PF01696 Adeno_E1B_55K: Adenov 97.0 0.11 2.5E-06 52.4 19.6 85 197-288 118-204 (386)
65 PLN02488 probable pectinestera 96.8 0.29 6.4E-06 51.3 21.8 208 83-345 209-433 (509)
66 PLN02314 pectinesterase 96.8 0.18 3.9E-06 54.3 20.9 210 83-348 290-512 (586)
67 PLN02416 probable pectinestera 96.8 0.16 3.4E-06 54.2 19.8 212 83-348 242-469 (541)
68 PLN03043 Probable pectinestera 96.8 0.13 2.8E-06 54.8 19.2 210 83-348 235-465 (538)
69 PLN02217 probable pectinestera 96.7 0.18 3.8E-06 54.9 20.0 142 197-348 334-489 (670)
70 PLN02197 pectinesterase 96.7 0.23 5.1E-06 53.3 20.6 142 197-348 361-517 (588)
71 PLN02301 pectinesterase/pectin 96.6 0.32 6.8E-06 51.9 20.9 210 83-348 248-475 (548)
72 PLN02313 Pectinesterase/pectin 96.6 0.25 5.3E-06 53.3 20.1 212 83-348 287-514 (587)
73 PLN02990 Probable pectinestera 96.5 0.43 9.3E-06 51.2 21.2 213 83-348 271-499 (572)
74 COG4677 PemB Pectin methyleste 96.1 1 2.2E-05 44.3 19.3 134 198-344 187-350 (405)
75 COG3420 NosD Nitrous oxidase a 95.5 0.26 5.7E-06 48.5 12.7 95 189-290 148-244 (408)
76 PF03211 Pectate_lyase: Pectat 95.2 0.68 1.5E-05 43.2 13.8 128 224-379 62-194 (215)
77 PF03211 Pectate_lyase: Pectat 94.8 3.2 7E-05 38.8 17.3 133 199-339 60-194 (215)
78 PF12218 End_N_terminal: N ter 94.2 0.07 1.5E-06 39.1 3.7 38 68-114 1-38 (67)
79 PLN02773 pectinesterase 93.4 2.2 4.9E-05 42.4 14.0 115 219-346 98-213 (317)
80 PLN02480 Probable pectinestera 91.6 8.2 0.00018 38.9 15.5 113 219-345 128-252 (343)
81 TIGR03804 para_beta_helix para 90.3 0.37 7.9E-06 32.9 3.3 39 217-260 2-40 (44)
82 PF09251 PhageP22-tail: Salmon 90.3 9.4 0.0002 39.0 14.3 67 272-341 263-346 (549)
83 PF09251 PhageP22-tail: Salmon 88.9 2.3 5E-05 43.2 8.9 58 273-346 311-368 (549)
84 TIGR03804 para_beta_helix para 88.4 0.78 1.7E-05 31.2 3.8 40 243-283 1-40 (44)
85 PF14592 Chondroitinas_B: Chon 88.0 6.9 0.00015 40.4 11.8 16 369-384 272-287 (425)
86 PLN02170 probable pectinestera 86.8 15 0.00032 39.2 13.8 117 218-346 308-428 (529)
87 PF01095 Pectinesterase: Pecti 86.6 6.2 0.00014 39.0 10.4 113 220-345 84-202 (298)
88 PLN02916 pectinesterase family 86.3 16 0.00034 38.7 13.6 116 219-346 273-393 (502)
89 PLN02665 pectinesterase family 85.9 22 0.00047 36.2 14.0 117 218-346 149-273 (366)
90 PLN02933 Probable pectinestera 85.9 38 0.00081 36.2 16.3 115 219-345 301-420 (530)
91 PLN02682 pectinesterase family 85.6 19 0.00041 36.6 13.4 114 219-345 159-280 (369)
92 PLN02506 putative pectinestera 85.2 12 0.00026 40.1 12.3 116 218-345 314-434 (537)
93 PLN02217 probable pectinestera 84.0 14 0.0003 40.6 12.3 113 221-345 335-452 (670)
94 PLN02201 probable pectinestera 83.9 26 0.00057 37.3 14.1 115 219-345 289-408 (520)
95 PLN02634 probable pectinestera 83.6 21 0.00045 36.2 12.6 112 222-345 148-266 (359)
96 PLN02698 Probable pectinestera 83.5 25 0.00054 37.4 13.7 141 198-348 268-422 (497)
97 PLN02432 putative pectinestera 83.3 49 0.0011 32.6 15.3 111 220-344 91-204 (293)
98 PLN02416 probable pectinestera 83.1 18 0.0004 38.7 12.7 113 220-345 314-432 (541)
99 PLN02301 pectinesterase/pectin 82.8 22 0.00047 38.2 13.0 114 220-345 320-438 (548)
100 PLN02468 putative pectinestera 82.7 19 0.00042 38.8 12.7 115 220-346 342-461 (565)
101 PLN02488 probable pectinestera 82.7 31 0.00068 36.5 13.9 115 220-346 281-400 (509)
102 PRK10123 wcaM putative colanic 82.3 5.4 0.00012 38.7 7.4 95 243-345 261-374 (464)
103 PLN02745 Putative pectinestera 82.1 27 0.00059 37.9 13.6 114 220-346 369-488 (596)
104 PRK10531 acyl-CoA thioesterase 82.0 27 0.00058 36.2 12.8 118 218-346 201-337 (422)
105 PLN02304 probable pectinestera 81.5 34 0.00074 34.9 13.3 113 220-344 159-286 (379)
106 PF01696 Adeno_E1B_55K: Adenov 81.4 9.5 0.00021 38.8 9.2 86 219-319 117-204 (386)
107 PLN02990 Probable pectinestera 81.2 28 0.0006 37.7 13.2 114 221-346 345-463 (572)
108 PLN02995 Probable pectinestera 81.0 23 0.00049 38.0 12.4 113 220-345 309-427 (539)
109 PLN02313 Pectinesterase/pectin 80.5 64 0.0014 35.1 15.7 115 220-346 359-478 (587)
110 PLN02497 probable pectinestera 80.2 26 0.00056 35.2 11.8 114 220-345 112-239 (331)
111 PLN02176 putative pectinestera 79.8 38 0.00083 34.1 12.9 113 221-345 120-246 (340)
112 PLN02314 pectinesterase 79.4 31 0.00066 37.5 12.9 113 220-346 362-481 (586)
113 PLN02671 pectinesterase 78.8 42 0.0009 34.1 12.8 112 221-345 152-270 (359)
114 PF07602 DUF1565: Protein of u 77.9 67 0.0015 30.8 14.2 49 217-267 91-140 (246)
115 PLN02197 pectinesterase 77.6 38 0.00083 36.7 12.9 114 220-346 361-481 (588)
116 PLN02708 Probable pectinestera 76.9 82 0.0018 34.0 15.1 115 219-345 326-449 (553)
117 PLN02698 Probable pectinestera 74.8 96 0.0021 33.0 14.8 116 219-346 266-386 (497)
118 PF08480 Disaggr_assoc: Disagg 73.8 30 0.00066 31.5 9.2 14 303-316 64-77 (198)
119 PLN02713 Probable pectinestera 70.5 79 0.0017 34.2 13.2 115 219-345 336-455 (566)
120 PLN02484 probable pectinestera 64.6 1.5E+02 0.0032 32.3 13.8 117 218-346 355-476 (587)
121 PLN03043 Probable pectinestera 59.7 2.4E+02 0.0051 30.4 14.2 116 218-345 308-428 (538)
122 PF08480 Disaggr_assoc: Disagg 57.1 80 0.0017 28.9 8.5 78 273-352 2-83 (198)
123 PTZ00459 mucin-associated surf 51.0 10 0.00022 37.4 2.1 26 1-33 1-26 (291)
124 PRK14864 putative biofilm stre 47.6 96 0.0021 25.6 7.0 13 18-30 12-24 (104)
125 smart00710 PbH1 Parallel beta- 46.9 20 0.00043 20.2 2.2 19 304-322 3-22 (26)
126 PRK10081 entericidin B membran 42.0 32 0.00069 24.2 2.8 14 14-27 10-23 (48)
127 COG4677 PemB Pectin methyleste 32.1 1.4E+02 0.0031 29.8 6.6 84 222-315 188-286 (405)
128 COG4704 Uncharacterized protei 29.7 3E+02 0.0065 23.9 7.3 31 83-113 62-93 (151)
129 smart00722 CASH Domain present 29.4 1.9E+02 0.0041 23.9 6.5 68 197-267 73-144 (146)
No 1
>PLN02793 Probable polygalacturonase
Probab=100.00 E-value=8.5e-82 Score=643.16 Aligned_cols=371 Identities=40% Similarity=0.705 Sum_probs=340.1
Q ss_pred CCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCc-EEEEeeEEeeCccCCCCeEEEEccEEEE
Q 039959 57 TAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRG-TFVLGPVTFMGPCNNTPLIVQIQGTIKA 135 (439)
Q Consensus 57 ~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G-~y~~~~i~l~g~~~~s~vtl~l~g~l~~ 135 (439)
.+++|||+||||++||++|| |+|||+||++||+..++++|+||+| +|+++++.|+||| ||+++|+++|+|++
T Consensus 49 ~~~~~~V~dfGA~gDG~tdd------T~Aiq~Ai~~aC~~~ggg~v~vP~G~~fl~~~i~l~gpc-ks~vtL~l~g~l~~ 121 (443)
T PLN02793 49 SERVLHVGDFGAKGDGVTDD------TQAFKEAWKMACSSKVKTRIVIPAGYTFLVRPIDLGGPC-KAKLTLQISGTIIA 121 (443)
T ss_pred CceEEEhhhcccCCCCCCcc------HHHHHHHHHHHhccCCCCEEEECCCceEEEEEEEECCcc-CCCeEEEEEEEEEc
Confidence 34899999999999999999 9999999998999888999999999 5999999999999 99999999999999
Q ss_pred eecCCCCCCC-CceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC
Q 039959 136 ITDISEFPGQ-GEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG 214 (439)
Q Consensus 136 ~~~~~~~~~~-~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~ 214 (439)
+.++.+|++. ...||++.+.+|++|+|.|+|||+|..||... ++.....|+..||++|.|.+|+|++|++++++|+|+
T Consensus 122 ~~d~~~w~~~~~~~~i~~~~~~ni~ItG~G~IDG~G~~ww~~~-~~~~~~~~~~~rP~~i~f~~~~nv~v~gitl~nSp~ 200 (443)
T PLN02793 122 PKDPDVWKGLNPRKWLYFHGVNHLTVEGGGTVNGMGHEWWAQS-CKINHTNPCRHAPTAITFHKCKDLRVENLNVIDSQQ 200 (443)
T ss_pred cCChHHccCCCCceEEEEecCceEEEEeceEEECCCccccccc-ccccCCCCccCCceEEEEEeeccEEEECeEEEcCCC
Confidence 9999999753 35799999999999999999999999999642 222222345678999999999999999999999999
Q ss_pred eeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecC
Q 039959 215 FHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLG 294 (439)
Q Consensus 215 ~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g 294 (439)
|++++..|+||+|+|++|.++.+++|+||||+.+|+||+|+||+|.++||||+++++++||+|+||+|.++|||+|||+|
T Consensus 201 ~~i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gDDcIaik~~s~nI~I~n~~c~~GhGisIGSlg 280 (443)
T PLN02793 201 MHIAFTNCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGDDCISIVGNSSRIKIRNIACGPGHGISIGSLG 280 (443)
T ss_pred eEEEEEccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCCCeEEecCCcCCEEEEEeEEeCCccEEEeccc
Confidence 99999999999999999999998999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEEEEeeeCCCC-CCCCCCCCCceeEE
Q 039959 295 KYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPIIIDQEYCPSN-SCKSTSEPSLVKLS 373 (439)
Q Consensus 295 ~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~-~~~~~~~~~~~~i~ 373 (439)
++...+.|+||+|+||+|.++.+|+|||+|+++ +|.|+||+|+||+|+++.+||.|++.|++.. .|.. .++.+.|+
T Consensus 281 ~~~~~~~V~nV~v~n~~~~~t~~GirIKt~~g~-~G~v~nItf~ni~m~nv~~pI~I~q~Y~~~~~~~~~--~ts~v~I~ 357 (443)
T PLN02793 281 KSNSWSEVRDITVDGAFLSNTDNGVRIKTWQGG-SGNASKITFQNIFMENVSNPIIIDQYYCDSRKPCAN--QTSAVKVE 357 (443)
T ss_pred CcCCCCcEEEEEEEccEEeCCCceEEEEEeCCC-CEEEEEEEEEeEEEecCCceEEEEeeecCCCCCCCC--CCCCeEEE
Confidence 987778999999999999999999999999964 7999999999999999999999999998743 4543 45678999
Q ss_pred eEEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecCCCCCCccc-cccccccccceecCCCCC
Q 039959 374 NIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTEPETPREG-RFNVKGVVNGLEILNSSF 439 (439)
Q Consensus 374 nI~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~~~~~~~~~-C~~~~g~~~~~~~~~~~~ 439 (439)
||+|+||+++.....++.|.|++..||+||+|+||+++...++ +..+ |+|++|...|.+.|++|+
T Consensus 358 nI~~~nI~Gt~~~~~ai~l~cs~~~pc~ni~l~nI~l~~~~g~-~~~~~C~n~~g~~~~~~~p~~C~ 423 (443)
T PLN02793 358 NISFVHIKGTSATEEAIKFACSDSSPCEGLYLEDVQLLSSTGD-FTESFCWEAYGSSSGQVYPPPCF 423 (443)
T ss_pred eEEEEEEEEEEcccccEEEEeCCCCCEeeEEEEeeEEEecCCC-CCCcEEEccEEeECCeEcCCccc
Confidence 9999999999876678999999999999999999999987654 4456 999999999999999996
No 2
>PLN02155 polygalacturonase
Probab=100.00 E-value=2.1e-81 Score=630.88 Aligned_cols=367 Identities=40% Similarity=0.729 Sum_probs=336.1
Q ss_pred CCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEe
Q 039959 57 TAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAI 136 (439)
Q Consensus 57 ~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~ 136 (439)
.+++|||+||||++||++|+ |+|||+||++||+..+|++|+||+|+|++++|.|+||| ||+++|+|+|+|+++
T Consensus 24 ~~~~~nv~~yGA~gDG~td~------t~Ai~~Ai~~aC~~~gGg~v~vP~G~yl~g~i~l~gpc-ksnv~l~l~G~l~~~ 96 (394)
T PLN02155 24 ASNVFNVVSFGAKPDGVTDS------TAAFLKAWQGACGSASSATVVVPTGTFLLKVITFGGPC-KSKITFQVAGTVVAP 96 (394)
T ss_pred CCcEEEhhhcCcCCCCcccc------HHHHHHHHHHHcccCCCeEEEECCCcEEEEEEEEcccC-CCCceEEEeeEEECc
Confidence 55889999999999999999 99999999889998889999999999999999999999 999999999999998
Q ss_pred ecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCee
Q 039959 137 TDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGFH 216 (439)
Q Consensus 137 ~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~ 216 (439)
.++..|... ..|+.+.+++++.|+| |+|||||+.||.... .... ++.+|++|+|.+|+|++|++++++|||.|+
T Consensus 97 ~d~~~~~~~-~~wi~~~~~~~i~i~G-G~iDGqG~~ww~~~~--~~~~--~~~~p~~i~~~~~~nv~i~gitl~nSp~w~ 170 (394)
T PLN02155 97 EDYRTFGNS-GYWILFNKVNRFSLVG-GTFDARANGFWSCRK--SGQN--CPPGVRSISFNSAKDVIISGVKSMNSQVSH 170 (394)
T ss_pred ccccccccc-ceeEEEECcCCCEEEc-cEEecCceeEEEccc--CCCC--CCCcccceeEEEeeeEEEECeEEEcCCCeE
Confidence 888777543 5799999999999999 999999999997531 1122 445789999999999999999999999999
Q ss_pred EEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCC
Q 039959 217 YFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKY 296 (439)
Q Consensus 217 i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~ 296 (439)
+++..|+||+|+|++|.++.+++|+||||+.+|+||+|+||+|.+|||||+++++++||+|+||+|.++||++|||+|++
T Consensus 171 i~~~~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gDDcIaik~gs~nI~I~n~~c~~GhGisIGS~g~~ 250 (394)
T PLN02155 171 MTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACGPGHGVSIGSLAKE 250 (394)
T ss_pred EEEECeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCCceEEcCCCCceEEEEEEEEECCceEEecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEEEEeeeCCCCC-CCCCCCCCceeEEeE
Q 039959 297 TDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPIIIDQEYCPSNS-CKSTSEPSLVKLSNI 375 (439)
Q Consensus 297 ~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~-~~~~~~~~~~~i~nI 375 (439)
...+.|+||+|+||+|.++.+|+|||+|.++++|.|+||+|+||+|+++++||.|++.|++... |.. ..+.+.|+||
T Consensus 251 ~~~~~V~nV~v~n~~~~~t~~GirIKT~~~~~gG~v~nI~f~ni~m~~v~~pI~i~q~Y~~~~~~~~~--~~s~v~i~~I 328 (394)
T PLN02155 251 LNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQDLVMKNVENPIIIDQNYCPTHEGCPN--EYSGVKISQV 328 (394)
T ss_pred CCCCcEEEEEEEeeEEeCCCcEEEEEEecCCCCEEEEEEEEEeEEEcCccccEEEEecccCCCCCCcC--CCCCeEEEEE
Confidence 6678999999999999999999999999765689999999999999999999999999987543 432 3566899999
Q ss_pred EEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecCCCCCCccc-cccccccccceecCCCCC
Q 039959 376 HFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTEPETPREG-RFNVKGVVNGLEILNSSF 439 (439)
Q Consensus 376 ~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~~~~~~~~~-C~~~~g~~~~~~~~~~~~ 439 (439)
+|+||+++.....++.|.|++..||+||+|+||+++..++. +... |+||+|.+.++++|++|+
T Consensus 329 t~~ni~gt~~~~~a~~l~c~~~~pc~~I~l~nv~i~~~~~~-~~~~~C~n~~G~~~~~~~p~~c~ 392 (394)
T PLN02155 329 TYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGT-PATSFCFNAVGKSLGVIQPTSCL 392 (394)
T ss_pred EEEeeEEEecCCceEEEEeCCCCCEEEEEEEeeEEEecCCC-ccCcEEeccEeEEcccCCccccc
Confidence 99999999977789999999999999999999999988543 4456 999999999988999996
No 3
>PLN02218 polygalacturonase ADPG
Probab=100.00 E-value=4.3e-81 Score=635.22 Aligned_cols=366 Identities=38% Similarity=0.711 Sum_probs=335.6
Q ss_pred CCCCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCc-EEEEeeEEeeCccCCCCeEEEEccEE
Q 039959 55 DPTAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRG-TFVLGPVTFMGPCNNTPLIVQIQGTI 133 (439)
Q Consensus 55 ~~~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G-~y~~~~i~l~g~~~~s~vtl~l~g~l 133 (439)
..++++|||+||||++||++|+ |+|||+||++||+..++++|+||+| +|+++++.|+||| +++++|+++|+|
T Consensus 62 ~~~~~~~nv~dfGA~gDG~tdd------T~Af~~Ai~~aCs~~Ggg~v~vP~G~tyl~~~i~l~gp~-ks~~~l~l~g~L 134 (431)
T PLN02218 62 LRTPTTVSVSDFGAKGDGKTDD------TQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPC-KSIRTVQIFGTL 134 (431)
T ss_pred cCCCcEEEeeecccCCCCCccc------HHHHHHHHHHhhhcCCCcEEEECCCCeEEEeeeEecCcc-CCceEEEEEEEE
Confidence 3467899999999999999999 9999999989999888899999999 6999999999999 889999999999
Q ss_pred EEeecCCCCCCCCceeEEEeeeeceEEecc--eEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEec
Q 039959 134 KAITDISEFPGQGEEWVNFQNINGLVVTGS--GTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVN 211 (439)
Q Consensus 134 ~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~--GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~n 211 (439)
+++++..+|+.. ..||.+.+++||+|+|. |+|||+|+.||... ++.....|+..||++|.|.+|+|++|+|++++|
T Consensus 135 ~~s~d~~~y~~~-~~wi~~~~~~ni~I~G~~~GtIDG~G~~WW~~~-~~~~~~~~~~~rP~~i~f~~~~nv~I~gitl~n 212 (431)
T PLN02218 135 SASQKRSDYKDI-SKWIMFDGVNNLSVDGGSTGVVDGNGETWWQNS-CKRNKAKPCTKAPTALTFYNSKSLIVKNLRVRN 212 (431)
T ss_pred EeCCChhhcccc-ccCEEEecCcEEEEECCCCcEEeCCchhhhhcc-cccCCcCccCcCCEEEEEEccccEEEeCeEEEc
Confidence 999999999654 68999999999999997 99999999999753 222333457789999999999999999999999
Q ss_pred CCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEe
Q 039959 212 SKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIG 291 (439)
Q Consensus 212 s~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~ig 291 (439)
+|+|++++..|+||+|+|++|.++.++||+||||+.+|+||+|+||+|.+|||||+|++|++||+|+||+|.++||++||
T Consensus 213 Sp~w~i~~~~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tGDDcIaIksgs~nI~I~n~~c~~GHGisIG 292 (431)
T PLN02218 213 AQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESGSQNVQINDITCGPGHGISIG 292 (431)
T ss_pred CCCEEEEEEceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecCCceEEecCCCceEEEEeEEEECCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEEEEeeeCCCCCCCCCCCCCcee
Q 039959 292 SLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPIIIDQEYCPSNSCKSTSEPSLVK 371 (439)
Q Consensus 292 s~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~ 371 (439)
|+|.+...+.|+||+|+||++.++.+|+|||+|++ ++|.|+||+|+||+|+++++||.|++.|++...|.. .++.+.
T Consensus 293 S~g~~~~~~~V~nV~v~n~~~~~t~nGvRIKT~~G-g~G~v~nI~f~ni~m~~V~~pI~Idq~Y~~~~~~~~--~~s~v~ 369 (431)
T PLN02218 293 SLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQG-GSGTASNIIFQNIQMENVKNPIIIDQDYCDKSKCTS--QQSAVQ 369 (431)
T ss_pred cCCCCCCCceEEEEEEEccEEecCCcceEEeecCC-CCeEEEEEEEEeEEEEcccccEEEEeeccCCCCCCC--CCCCeE
Confidence 99987667899999999999999999999999986 479999999999999999999999999998766654 467789
Q ss_pred EEeEEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecCCCCCCccccccccccccceecCCCC
Q 039959 372 LSNIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTEPETPREGRFNVKGVVNGLEILNSS 438 (439)
Q Consensus 372 i~nI~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~~~~~~~~~C~~~~g~~~~~~~~~~~ 438 (439)
|+||+|+||+++.+.+.++.+.|+++.||+||+|+||+++.. ...|+||.|...|.++| .|
T Consensus 370 I~nI~~~NI~gtsa~~~ai~l~cs~~~pc~nI~l~nV~i~~~-----~~~c~n~~~~~~~~~~p-~c 430 (431)
T PLN02218 370 VKNVVYRNISGTSASDVAITFNCSKNYPCQGIVLDNVNIKGG-----KATCTNANVVDKGAVSP-QC 430 (431)
T ss_pred EEEEEEEeEEEEecCCcEEEEEECCCCCEeeEEEEeEEEECC-----eeeEEEeeEEEcccCCC-CC
Confidence 999999999999877789999999999999999999999842 11299999999996655 77
No 4
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=100.00 E-value=1.4e-80 Score=627.47 Aligned_cols=368 Identities=47% Similarity=0.847 Sum_probs=333.9
Q ss_pred CCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEEEEeeEEeeCccC-CCCeEEEEccEEEE
Q 039959 57 TAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGPVTFMGPCN-NTPLIVQIQGTIKA 135 (439)
Q Consensus 57 ~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~i~l~g~~~-~s~vtl~l~g~l~~ 135 (439)
.+.+|||+||||+|||++|+ |+|||+||++||++.|+++|+||+|+|+++++.|+|||+ +++++| +|++
T Consensus 33 ~~~~~nv~d~GA~gDg~tdd------T~Ai~~Ai~~aC~~~Ggg~V~vP~G~yl~g~i~lkgpc~~~s~v~l----~L~~ 102 (404)
T PLN02188 33 STFLFDVRSFGARANGHTDD------SKAFMAAWKAACASTGAVTLLIPPGTYYIGPVQFHGPCTNVSSLTF----TLKA 102 (404)
T ss_pred CceEEehhhcCcCCCCCeeC------HHHHHHHHHHHhccCCCeEEEECCCeEEEEeEEeCCCcCcceeEEE----EEEc
Confidence 45799999999999999999 999999998899988889999999999999999999993 234554 8999
Q ss_pred eecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCe
Q 039959 136 ITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGF 215 (439)
Q Consensus 136 ~~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~ 215 (439)
+++.++|+.. ..|+.+..++||+|+|.|+|||+|+.||....+...+. +..||++|.|.+|+|+.|++++++|+|+|
T Consensus 103 s~d~~~y~~~-~~~i~~~~~~ni~I~G~G~IDG~G~~ww~~~~~~~~~~--~~~rP~~i~f~~~~nv~i~gitl~nSp~w 179 (404)
T PLN02188 103 ATDLSRYGSG-NDWIEFGWVNGLTLTGGGTFDGQGAAAWPFNKCPIRKD--CKLLPTSVKFVNMNNTVVRGITSVNSKFF 179 (404)
T ss_pred CCCHHHCCCc-cceEEEeceeeEEEEeeEEEeCCCcccccccccccCCC--CCcCceEEEEEeeeeEEEeCeEEEcCCCe
Confidence 9999999754 67999999999999999999999999997543332223 56799999999999999999999999999
Q ss_pred eEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCC
Q 039959 216 HYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGK 295 (439)
Q Consensus 216 ~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~ 295 (439)
++++..|+||+|++++|.++.+++|+||||+.+|+||+|+||+|.+|||||+++++++||+|+|+.|.++|||+|||+|+
T Consensus 180 ~i~~~~~~~v~i~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~GDDcIaiksg~~nI~I~n~~c~~ghGisiGSlG~ 259 (404)
T PLN02188 180 HIALVECRNFKGSGLKISAPSDSPNTDGIHIERSSGVYISDSRIGTGDDCISIGQGNSQVTITRIRCGPGHGISVGSLGR 259 (404)
T ss_pred EEEEEccccEEEEEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeCCCcEEEEccCCccEEEEEEEEcCCCcEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCEEEEEEEeEEEeCCcceEEEEecCCC-CCcceeeEEEEeEEEeccCccEEEEeeeCCCCCCCCCCCCCceeEEe
Q 039959 296 YTDEEDVVGINVRNCTITGTQNGVRVKTWPGA-PASHASNFMFTDIVMINVSNPIIIDQEYCPSNSCKSTSEPSLVKLSN 374 (439)
Q Consensus 296 ~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~-~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~i~n 374 (439)
++..+.|+||+|+||+|.++.+|+|||+|.+. ++|.|+||+|+||+|+++++||.|++.|++...|... .++.+.|+|
T Consensus 260 ~~~~~~V~nV~v~n~~~~~t~~GiriKt~~g~~~~G~v~nI~f~ni~m~~v~~pI~i~~~Y~~~~~~~~~-~~s~v~I~n 338 (404)
T PLN02188 260 YPNEGDVTGLVVRDCTFTGTTNGIRIKTWANSPGKSAATNMTFENIVMNNVTNPIIIDQKYCPFYSCESK-YPSGVTLSD 338 (404)
T ss_pred CCcCCcEEEEEEEeeEEECCCcEEEEEEecCCCCceEEEEEEEEeEEecCccceEEEEccccCCCCCCcC-CCCCcEEEe
Confidence 87788999999999999999999999999753 3589999999999999999999999999987666432 356789999
Q ss_pred EEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecCCCCCCccc-cccccccccceecCCCC
Q 039959 375 IHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTEPETPREG-RFNVKGVVNGLEILNSS 438 (439)
Q Consensus 375 I~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~~~~~~~~~-C~~~~g~~~~~~~~~~~ 438 (439)
|+|+||+++.....++.|.|+++.||+||+|+||+++.+.+..+..+ |+||+|.+.|.++|++|
T Consensus 339 It~~nI~gt~~~~~a~~l~cs~~~pc~ni~~~nV~i~~~~g~~~~~~~C~nv~g~~~g~~~p~~C 403 (404)
T PLN02188 339 IYFKNIRGTSSSQVAVLLKCSRGVPCQGVYLQDVHLDLSSGEGGTSSSCENVRAKYIGTQIPPPC 403 (404)
T ss_pred EEEEEEEEEecCceEEEEEECCCCCEeeEEEEeeEEEecCCCCCcCceeEcceeEEcccCcCCCC
Confidence 99999999997677899999999999999999999998755434456 99999999999999999
No 5
>PLN03003 Probable polygalacturonase At3g15720
Probab=100.00 E-value=2.3e-79 Score=620.58 Aligned_cols=363 Identities=38% Similarity=0.701 Sum_probs=329.7
Q ss_pred CCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCc-EEEEeeEEeeCccCCCCeEEEEccEEEE
Q 039959 57 TAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRG-TFVLGPVTFMGPCNNTPLIVQIQGTIKA 135 (439)
Q Consensus 57 ~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G-~y~~~~i~l~g~~~~s~vtl~l~g~l~~ 135 (439)
.+.+|||++|||++||++|+ |+|||+||++||+..++++|+||+| +|+++++.|+|||+...++++++|+|++
T Consensus 20 ~~~~fnV~~yGA~gDG~tDd------T~Af~~Aw~aaC~~~ggg~v~VP~G~~yl~~pl~l~gpck~~~~~~~i~G~i~a 93 (456)
T PLN03003 20 SSNALDVTQFGAVGDGVTDD------SQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVA 93 (456)
T ss_pred eeeEEehhhcCCCCCCCccc------HHHHHHHHHHhhhccCCCEEEECCCceEEeeeeEeCCCccCcceeeccCceEec
Confidence 45789999999999999999 9999999999998888999999999 4899999999999333588889999998
Q ss_pred eecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCe
Q 039959 136 ITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGF 215 (439)
Q Consensus 136 ~~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~ 215 (439)
+.. ..|.+....||.|.++++++|+|.|+|||+|+.||.. ...||++++|.+|+|++|+|++++|+|+|
T Consensus 94 p~~-~~w~~~~~~wI~f~~~~~i~I~G~GtIDGqG~~wW~~----------~~~rP~~l~f~~~~nv~I~gitl~NSp~w 162 (456)
T PLN03003 94 PSK-GNWKGDKDQWILFTDIEGLVIEGDGEINGQGSSWWEH----------KGSRPTALKFRSCNNLRLSGLTHLDSPMA 162 (456)
T ss_pred Ccc-ccccCCCcceEEEEcccceEEeccceEeCCchhhhhc----------ccCCceEEEEEecCCcEEeCeEEecCCcE
Confidence 654 4575544679999999999999999999999999974 23589999999999999999999999999
Q ss_pred eEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCC
Q 039959 216 HYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGK 295 (439)
Q Consensus 216 ~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~ 295 (439)
++++..|+||+|+|++|.++.+++|+||||+.+|+||+|+||+|.+|||||++++|++||+|+||+|.++|||+|||+|.
T Consensus 163 ~i~i~~c~nV~i~~l~I~ap~~spNTDGIDi~~S~nV~I~n~~I~tGDDCIaiksgs~NI~I~n~~c~~GHGISIGSlg~ 242 (456)
T PLN03003 163 HIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGK 242 (456)
T ss_pred EEEEeccccEEEEEEEEeCCCCCCCCCcEeecCcceEEEEecEEecCCCeEEeCCCCccEEEEeeEEECCCCeEEeeccC
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEEEEeeeCCCCC---CCCCCCCCceeE
Q 039959 296 YTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPIIIDQEYCPSNS---CKSTSEPSLVKL 372 (439)
Q Consensus 296 ~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~---~~~~~~~~~~~i 372 (439)
++..+.|+||+|+||+|.++.+|+|||+|+++ +|.|+||+|+||+|+++++||.|+|.|++... |.. .++.+.|
T Consensus 243 ~g~~~~V~NV~v~n~~~~~T~nGvRIKT~~Gg-~G~v~nItf~nI~m~nV~~pI~Idq~Y~~~~~~~~~~~--~~s~v~I 319 (456)
T PLN03003 243 DGETATVENVCVQNCNFRGTMNGARIKTWQGG-SGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDR--KSSAVEV 319 (456)
T ss_pred CCCcceEEEEEEEeeEEECCCcEEEEEEeCCC-CeEEEEEEEEeEEecCccceEEEEcccCCCCCCCcccC--CCCCcEE
Confidence 87678899999999999999999999999975 79999999999999999999999999986432 222 4567899
Q ss_pred EeEEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecCC--CCCCccc-cccccccccceecCCCCC
Q 039959 373 SNIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTE--PETPREG-RFNVKGVVNGLEILNSSF 439 (439)
Q Consensus 373 ~nI~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~~--~~~~~~~-C~~~~g~~~~~~~~~~~~ 439 (439)
+||+|+||+++...+.++.|.|++..||+||+|+||+|+... .+.++.. |+||+|.+.++.+|++|+
T Consensus 320 snI~f~NI~GTs~~~~ai~l~Cs~~~PC~nI~l~ni~l~~~~~g~~~~~~~~C~Nv~G~~~~~~~~~~C~ 389 (456)
T PLN03003 320 SKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECL 389 (456)
T ss_pred EeEEEEeEEEEeCccceEEEEeCCCCCeeeEEEEEEEEEecCCCCCCccCcEEeccccccCceECCCCcc
Confidence 999999999998878899999999999999999999999873 2234556 999999999988888996
No 6
>PLN03010 polygalacturonase
Probab=100.00 E-value=7e-78 Score=606.48 Aligned_cols=356 Identities=39% Similarity=0.732 Sum_probs=328.6
Q ss_pred CCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCC-CcEEEEcCc-EEEEeeEEeeCccCCCCeEEEEccEEE
Q 039959 57 TAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEG-KARLVIPRG-TFVLGPVTFMGPCNNTPLIVQIQGTIK 134 (439)
Q Consensus 57 ~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~-~~~v~~P~G-~y~~~~i~l~g~~~~s~vtl~l~g~l~ 134 (439)
.+++|||+||||++||++|+ |+|||+||++||...+ +++|+||+| +|+++++.|+|||+.++++|+++|+|+
T Consensus 43 ~~~~~nV~dyGA~gDG~tdd------t~A~~~Ai~~ac~~~g~~g~v~vP~G~~yl~~~i~l~~pc~~~~v~l~l~G~l~ 116 (409)
T PLN03010 43 NGQNYNVLKFGAKGDGQTDD------SNAFLQAWNATCGGEGNINTLLIPSGKTYLLQPIEFKGPCKSTSIKVQLDGIIV 116 (409)
T ss_pred CCcEEeeeecCcCCCCCccc------HHHHHHHHHHHccCCCCceEEEECCCCeEEEEeEEecCCCCCCcEEEEEccEEE
Confidence 45789999999999999999 9999999988886433 379999999 799999999999966789999999999
Q ss_pred EeecCCCCCCC-CceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCC
Q 039959 135 AITDISEFPGQ-GEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSK 213 (439)
Q Consensus 135 ~~~~~~~~~~~-~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~ 213 (439)
++++..+|+.. ...|+.|.+++|++|+|.|+|||+|+.||. +++|.+|+|++|++++++|+|
T Consensus 117 ~~~d~~~w~~~~~~~wi~f~~v~nv~I~G~G~IDG~G~~ww~-----------------~l~~~~~~nv~v~gitl~nsp 179 (409)
T PLN03010 117 APSNIVAWSNPKSQMWISFSTVSGLMIDGSGTIDGRGSSFWE-----------------ALHISKCDNLTINGITSIDSP 179 (409)
T ss_pred ccCChhhccCCCCcceEEEecccccEEeeceEEeCCCccccc-----------------eEEEEeecCeEEeeeEEEcCC
Confidence 99999999642 357999999999999999999999999994 489999999999999999999
Q ss_pred CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeec
Q 039959 214 GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSL 293 (439)
Q Consensus 214 ~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~ 293 (439)
+|++++..|+||+|+|++|.++.+++|+||||+.+|++|+|+||+|.++||||++|++++|+.|+++.|.++|||+|||+
T Consensus 180 ~~~i~i~~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n~~I~~gDDcIaiksgs~ni~I~~~~C~~gHGisIGS~ 259 (409)
T PLN03010 180 KNHISIKTCNYVAISKINILAPETSPNTDGIDISYSTNINIFDSTIQTGDDCIAINSGSSNINITQINCGPGHGISVGSL 259 (409)
T ss_pred ceEEEEeccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEeeEEecCCCeEEecCCCCcEEEEEEEeECcCCEEEccC
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEEEEeeeCCCCC-CCCCCCCCceeE
Q 039959 294 GKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPIIIDQEYCPSNS-CKSTSEPSLVKL 372 (439)
Q Consensus 294 g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~-~~~~~~~~~~~i 372 (439)
|..+....|+||+|+||+|.++.+|+|||+|.++ +|.|+||+|+||+|+++++||.|++.|++... |.. .++++.|
T Consensus 260 g~~~~~~~V~nV~v~n~~i~~t~~GirIKt~~G~-~G~v~nItf~nI~m~~v~~pI~I~q~Y~~~~~~~~~--~~s~v~I 336 (409)
T PLN03010 260 GADGANAKVSDVHVTHCTFNQTTNGARIKTWQGG-QGYARNISFENITLINTKNPIIIDQQYIDKGKLDAT--KDSAVAI 336 (409)
T ss_pred CCCCCCCeeEEEEEEeeEEeCCCcceEEEEecCC-CEEEEEeEEEeEEEecCCccEEEEeeccCCCCCCCC--CCCceEE
Confidence 9877678899999999999999999999999864 79999999999999999999999999998544 432 5678999
Q ss_pred EeEEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecCCCCCCccc-cccccccccceecCCCCC
Q 039959 373 SNIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTEPETPREG-RFNVKGVVNGLEILNSSF 439 (439)
Q Consensus 373 ~nI~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~~~~~~~~~-C~~~~g~~~~~~~~~~~~ 439 (439)
+||+|+||+++...+.++.|.|++..||+||+|+||+++.+.+.. ... |.|++|.+.++..|++||
T Consensus 337 sdi~~~ni~GT~~~~~~i~l~Cs~~~pC~ni~~~~v~l~~~~g~~-~~~~C~nv~g~~~~~~~~~~C~ 403 (409)
T PLN03010 337 SNVKYVGFRGTTSNENAITLKCSAITHCKDVVMDDIDVTMENGEK-PKVECQNVEGESSDTDLMRDCF 403 (409)
T ss_pred EeEEEEeeEEEeCCCccEEEEeCCCCCEeceEEEEEEEEecCCCc-cceEeeCccccccCCCCCCccc
Confidence 999999999998878899999999999999999999999886543 445 999999999999999997
No 7
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=100.00 E-value=3.4e-59 Score=464.43 Aligned_cols=323 Identities=38% Similarity=0.671 Sum_probs=277.5
Q ss_pred hhcCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCcc
Q 039959 94 CHHEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASC 173 (439)
Q Consensus 94 ~~~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~ 173 (439)
|++.++++|+||+|+|+++++.|+++| .++++++|+|++.++.....++. ..||.+.+++|++|+|.|+|||+|+.|
T Consensus 1 C~~~~~~~v~vP~g~~~~~~~~l~~~l-~~~~~~~l~G~~~~~~~~~~~~~--~~~i~~~~~~ni~i~G~G~IDG~G~~w 77 (326)
T PF00295_consen 1 CSSIGGGTVVVPAGTYLLGPLFLKSTL-HSDVGLTLDGTINFSYDNWEGPN--SALIYAENAENITITGKGTIDGNGQAW 77 (326)
T ss_dssp HSEEEEESEEESTSTEEEEETSEETEC-ETTCEEEEESEEEEG-EESTSE---SEEEEEESEEEEECTTSSEEE--GGGT
T ss_pred CcCCcCCEEEECCCCeEEceeEEEccc-CCCeEEEEEEEEEeCCCcccCCc--cEEEEEEceEEEEecCCceEcCchhhh
Confidence 556677899999999999999998766 57899999999998765555543 689999999999999999999999999
Q ss_pred ccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEE
Q 039959 174 WKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVK 253 (439)
Q Consensus 174 w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~ 253 (439)
|....... .+...||+++.|.+|++++|++++++|+|.|++++..|+||+|++++|.++.+.+|+|||++.+|+||+
T Consensus 78 ~~~~~~~~---~~~~~rp~~i~~~~~~~~~i~~i~~~nsp~w~~~~~~~~nv~i~~i~I~~~~~~~NtDGid~~~s~nv~ 154 (326)
T PF00295_consen 78 WDGSGDAN---NNGQRRPRLIRFNNCKNVTIEGITIRNSPFWHIHINDCDNVTISNITINNPANSPNTDGIDIDSSKNVT 154 (326)
T ss_dssp CSSCTTHC---CSSSSSSESEEEEEEEEEEEESEEEES-SSESEEEESEEEEEEESEEEEEGGGCTS--SEEEESEEEEE
T ss_pred hccccccc---cccccccceeeeeeecceEEEeeEecCCCeeEEEEEccCCeEEcceEEEecCCCCCcceEEEEeeeEEE
Confidence 97532111 225679999999999999999999999999999999999999999999998888999999999999999
Q ss_pred EEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCccee
Q 039959 254 IAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHAS 333 (439)
Q Consensus 254 I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~ 333 (439)
|+||+|.++||||++|+++.||+|+||+|.++||++|||++..+....|+||+|+||+|.++.+|++||++++ ++|.|+
T Consensus 155 I~n~~i~~gDD~Iaiks~~~ni~v~n~~~~~ghGisiGS~~~~~~~~~i~nV~~~n~~i~~t~~gi~iKt~~~-~~G~v~ 233 (326)
T PF00295_consen 155 IENCFIDNGDDCIAIKSGSGNILVENCTCSGGHGISIGSEGSGGSQNDIRNVTFENCTIINTDNGIRIKTWPG-GGGYVS 233 (326)
T ss_dssp EESEEEESSSESEEESSEECEEEEESEEEESSSEEEEEEESSSSE--EEEEEEEEEEEEESESEEEEEEEETT-TSEEEE
T ss_pred EEEeecccccCcccccccccceEEEeEEEeccccceeeeccCCccccEEEeEEEEEEEeeccceEEEEEEecc-cceEEe
Confidence 9999999999999999988899999999999999999999865444579999999999999999999999985 479999
Q ss_pred eEEEEeEEEeccCccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEecC
Q 039959 334 NFMFTDIVMINVSNPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPT 413 (439)
Q Consensus 334 nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~~ 413 (439)
||+|+||+|+++.+||.|++.|.+...+.. .++.+.|+||+|+||+++.....++.+.|.+..||+||+|+||+++.
T Consensus 234 nI~f~ni~~~~v~~pi~i~~~y~~~~~~~~--~~~~~~i~nI~~~nitg~~~~~~~i~i~~~~~~~~~ni~f~nv~i~~- 310 (326)
T PF00295_consen 234 NITFENITMENVKYPIFIDQDYRDGGPCGK--PPSGVSISNITFRNITGTSAGSSAISIDCSPGSPCSNITFENVNITG- 310 (326)
T ss_dssp EEEEEEEEEEEESEEEEEEEEECTTEESSC--SSSSSEEEEEEEEEEEEEESTSEEEEEE-BTTSSEEEEEEEEEEEES-
T ss_pred ceEEEEEEecCCceEEEEEeccccccccCc--ccCCceEEEEEEEeeEEEeccceEEEEEECCcCcEEeEEEEeEEEEc-
Confidence 999999999999999999999988555543 34567999999999999997667999999999999999999999998
Q ss_pred CCCCCcccccccccc
Q 039959 414 EPETPREGRFNVKGV 428 (439)
Q Consensus 414 ~~~~~~~~C~~~~g~ 428 (439)
++ ....|+|++..
T Consensus 311 g~--~~~~c~nv~~~ 323 (326)
T PF00295_consen 311 GK--KPAQCKNVPSG 323 (326)
T ss_dssp SB--SESEEBSCCTT
T ss_pred CC--cCeEEECCCCC
Confidence 32 22239998764
No 8
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.8e-42 Score=352.65 Aligned_cols=279 Identities=27% Similarity=0.457 Sum_probs=236.2
Q ss_pred CCCCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEc-c-E
Q 039959 55 DPTAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQ-G-T 132 (439)
Q Consensus 55 ~~~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~-g-~ 132 (439)
.+....++|++|||++||.+|+ ++|||+|| ++|+..+|++|+||+|+|+.++|.| ||+++|+++ | |
T Consensus 77 ~~~~t~~sv~~~ga~gDG~t~~------~~aiq~AI-~~ca~a~Gg~V~lPaGtylsg~l~L-----KS~~~L~l~egat 144 (542)
T COG5434 77 AATDTAFSVSDDGAVGDGATDN------TAAIQAAI-DACASAGGGTVLLPAGTYLSGPLFL-----KSNVTLHLAEGAT 144 (542)
T ss_pred ccccceeeeccccccccCCccC------HHHHHHHH-HhhhhhcCceEEECCceeEeeeEEE-----ecccEEEecCCce
Confidence 3356789999999999999999 99999996 5777788999999999999999999 699999994 5 9
Q ss_pred EEEeecCCCCCC---------CC--------c-------------eeEEEeeeeceE-EecceEEeCCC----Ccccccc
Q 039959 133 IKAITDISEFPG---------QG--------E-------------EWVNFQNINGLV-VTGSGTFDGQG----ASCWKYR 177 (439)
Q Consensus 133 l~~~~~~~~~~~---------~~--------~-------------~~I~~~~~~nV~-I~G~GtIDG~G----~~~w~~~ 177 (439)
|+++.++.+|+. .. . ..+.....+|.. |.|.|+++|++ ..||...
T Consensus 145 l~~~~~p~~y~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~d~~~~~~~~~~~~n~~~i~g~~~i~g~~~~~g~~~~~~~ 224 (542)
T COG5434 145 LLASSNPKDYPSFTSRFNGNSGPYVYATDSDNAMISGEGLADGKADLLIAGNSSNRKEIWGKGTIDGNGYKRGDKWFSGL 224 (542)
T ss_pred eeCCCChhhccccccccccccCcceeeecccCceeeeecccccCcccceeccCCceEEEeccceecCccccchhhhhhcc
Confidence 999999998883 00 0 112223335555 88899999975 2267543
Q ss_pred CCCCCCCCCCc-CCCceeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEe
Q 039959 178 DTKNDNNVPGQ-RLPANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAK 256 (439)
Q Consensus 178 ~~~~~~~~p~~-~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n 256 (439)
... ....+.. .||..+.+..|+||+++|++|.+++.|.+|+..|+|++++|++|.+.... |+|||++.+|+||+|++
T Consensus 225 g~~-~~~i~~~~~rp~~~~l~~c~NV~~~g~~i~ns~~~~~h~~~~~nl~~~nl~I~~~~~~-NtDG~d~~sc~NvlI~~ 302 (542)
T COG5434 225 GAV-ETRIGGKGVRPRTVVLKGCRNVLLEGLNIKNSPLWTVHPVDCDNLTFRNLTIDANRFD-NTDGFDPGSCSNVLIEG 302 (542)
T ss_pred cch-hhcccccCcCCceEEEeccceEEEeeeEecCCCcEEEeeecccCceecceEEECCCCC-CCCccccccceeEEEec
Confidence 210 1111111 58999999999999999999999999999999999999999999998765 99999999999999999
Q ss_pred eEEecCCceEEecCC-----------ceeEEEEeeEecCCce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEec
Q 039959 257 SYIGTGDDCVGMIRG-----------SSNVSVKKVTCGPGHG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTW 324 (439)
Q Consensus 257 ~~i~~gDD~i~i~~g-----------s~nV~I~n~~~~~~~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~ 324 (439)
|+|.++||||+++++ ++||+|+||++..+|| +.+||+ ..++|+||++|||.|.++.+|+|||+.
T Consensus 303 ~~fdtgDD~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~ghG~~v~Gse----~~ggv~ni~ved~~~~~~d~GLRikt~ 378 (542)
T COG5434 303 CRFDTGDDCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGHGGLVLGSE----MGGGVQNITVEDCVMDNTDRGLRIKTN 378 (542)
T ss_pred cEEecCCceEEeecccCCcccccccccccEEEecceecccccceEeeee----cCCceeEEEEEeeeeccCcceeeeeee
Confidence 999999999999986 6999999999999997 888998 779999999999999999999999999
Q ss_pred CCCCCcceeeEEEEeEEEeccCccEEEE
Q 039959 325 PGAPASHASNFMFTDIVMINVSNPIIID 352 (439)
Q Consensus 325 ~g~~~g~v~nI~f~ni~~~~~~~~i~I~ 352 (439)
.+ ++|.++||+|++++|.++..+..|.
T Consensus 379 ~~-~gG~v~nI~~~~~~~~nv~t~~~i~ 405 (542)
T COG5434 379 DG-RGGGVRNIVFEDNKMRNVKTKLSIN 405 (542)
T ss_pred cc-cceeEEEEEEecccccCcccceeee
Confidence 85 5799999999999999996554444
No 9
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=99.93 E-value=1.1e-24 Score=217.89 Aligned_cols=250 Identities=17% Similarity=0.257 Sum_probs=190.3
Q ss_pred CCCCCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEc-cE
Q 039959 54 LDPTAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQ-GT 132 (439)
Q Consensus 54 ~~~~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~-g~ 132 (439)
|.++.+.+|+++|||++||++|+ |+|||+||++| + .++.+|.+|+|+|+.+++.| +++++|..+ +.
T Consensus 31 p~~p~r~~dv~~fGa~~dG~td~------T~ALQaAIdaA-a-~gG~tV~Lp~G~Y~~G~L~L-----~spltL~G~~gA 97 (455)
T TIGR03808 31 PLTSTLGRDATQYGVRPNSPDDQ------TRALQRAIDEA-A-RAQTPLALPPGVYRTGPLRL-----PSGAQLIGVRGA 97 (455)
T ss_pred CCCCccCCCHHHcCcCCCCcchH------HHHHHHHHHHh-h-cCCCEEEECCCceecccEEE-----CCCcEEEecCCc
Confidence 44456669999999999999999 99999998755 3 34579999999999999999 588999886 33
Q ss_pred EEEeecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecC
Q 039959 133 IKAITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNS 212 (439)
Q Consensus 133 l~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns 212 (439)
... .+.+. ...+...+.++|+|+|. +|+|+|..|- .+|.+|++..|++++|+++++.++
T Consensus 98 t~~-----vIdG~-~~lIiai~A~nVTIsGL-tIdGsG~dl~--------------~rdAgI~v~~a~~v~Iedn~L~gs 156 (455)
T TIGR03808 98 TRL-----VFTGG-PSLLSSEGADGIGLSGL-TLDGGGIPLP--------------QRRGLIHCQGGRDVRITDCEITGS 156 (455)
T ss_pred EEE-----EEcCC-ceEEEEecCCCeEEEee-EEEeCCCccc--------------CCCCEEEEccCCceEEEeeEEEcC
Confidence 110 01122 56677788999999997 9999997542 367899999999999999999999
Q ss_pred CCeeEEEecee----------------------cEEEEeEEEECCCC--------------------------------C
Q 039959 213 KGFHYFITGCK----------------------NIRLYHLNIIAPDE--------------------------------S 238 (439)
Q Consensus 213 ~~~~i~~~~~~----------------------nv~i~n~~i~~~~~--------------------------------~ 238 (439)
..|++.+..|+ ++.|++.+|....+ .
T Consensus 157 g~FGI~L~~~~~~I~~N~I~g~~~~~I~lw~S~g~~V~~N~I~g~RD~gi~i~r~~~~~dg~~v~~n~i~~i~a~~gg~~ 236 (455)
T TIGR03808 157 GGNGIWLETVSGDISGNTITQIAVTAIVSFDALGLIVARNTIIGANDNGIEILRSAIGDDGTIVTDNRIEDIKAGPGGSG 236 (455)
T ss_pred CcceEEEEcCcceEecceEeccccceEEEeccCCCEEECCEEEccCCCCeEEEEeeecCCcceeeccccccccccCCCcC
Confidence 88999999999 88888887776444 3
Q ss_pred CCCCceeeeCceeEEEEeeEEecCC-ceEEecCCceeEEEEeeEecCCceEEEeecCCCCCCCCEEEEEEEeEEEeCCcc
Q 039959 239 PNTDGIHISQSDVVKIAKSYIGTGD-DCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTDEEDVVGINVRNCTITGTQN 317 (439)
Q Consensus 239 ~n~DGI~i~~s~nv~I~n~~i~~gD-D~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~ 317 (439)
...+||++..+.+++|++.+|+..+ |+|.+.+ ++|+.|+++.|..-.=..+-++ | ..+.-.|+|+++.+...
T Consensus 237 ~~GNGI~~~~a~~v~V~gN~I~~~r~dgI~~ns-ss~~~i~~N~~~~~R~~alhym--f----s~~g~~i~~N~~~g~~~ 309 (455)
T TIGR03808 237 QYGNAINAFRAGNVIVRGNRIRNCDYSAVRGNS-ASNIQITGNSVSDVREVALYSE--F----AFEGAVIANNTVDGAAV 309 (455)
T ss_pred CccccEEEEccCCeEEECCEEeccccceEEEEc-ccCcEEECcEeeeeeeeEEEEE--E----eCCCcEEeccEEecCcc
Confidence 4577899999999999999999988 9988877 7888888888873211122221 1 11223478888888888
Q ss_pred eEEEEecC-CCCCcceeeEEEEeEEEec
Q 039959 318 GVRVKTWP-GAPASHASNFMFTDIVMIN 344 (439)
Q Consensus 318 gi~Iks~~-g~~~g~v~nI~f~ni~~~~ 344 (439)
|+.+-... |++-..++.-.++|++-+.
T Consensus 310 G~av~nf~~ggr~~~~~gn~irn~~~~~ 337 (455)
T TIGR03808 310 GVSVCNFNEGGRLAVVQGNIIRNLIPKR 337 (455)
T ss_pred eEEEEeecCCceEEEEecceeeccccCC
Confidence 98887654 3344456666777777655
No 10
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=99.86 E-value=2.5e-20 Score=175.16 Aligned_cols=213 Identities=23% Similarity=0.316 Sum_probs=123.5
Q ss_pred eEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEEEEee-EEeeCccCCCCeEEEEcc---EEEE
Q 039959 60 VFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGP-VTFMGPCNNTPLIVQIQG---TIKA 135 (439)
Q Consensus 60 ~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~-i~l~g~~~~s~vtl~l~g---~l~~ 135 (439)
.+||++|||+|||++|+ |+|||+||++ .+..++++||||+|+|+++. +.+ +++++|+++| +++.
T Consensus 1 ~inv~~fGa~~dG~tDd------t~Aiq~Ai~~-~~~~~g~~v~~P~G~Y~i~~~l~~-----~s~v~l~G~g~~~~~~~ 68 (225)
T PF12708_consen 1 FINVTDFGAKGDGVTDD------TAAIQAAIDA-AAAAGGGVVYFPPGTYRISGTLII-----PSNVTLRGAGGNSTILF 68 (225)
T ss_dssp EEEGGGGT--TEEEEE-------HHHHHHHHHH-HCSTTSEEEEE-SEEEEESS-EEE------TTEEEEESSTTTEEEE
T ss_pred CcceeecCcCCCCChhH------HHHHHHhhhh-cccCCCeEEEEcCcEEEEeCCeEc-----CCCeEEEccCCCeeEEE
Confidence 47999999999999999 9999999843 34577899999999999975 888 5899999974 3333
Q ss_pred -eecCCCCCCCCceeEEEee-eec--eEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEec
Q 039959 136 -ITDISEFPGQGEEWVNFQN-ING--LVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVN 211 (439)
Q Consensus 136 -~~~~~~~~~~~~~~I~~~~-~~n--V~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~n 211 (439)
......+... .....+.. -.+ +.|++ -+|++++...- .....+.+..++++.|+++++.+
T Consensus 69 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~n-l~i~~~~~~~~--------------~~~~~i~~~~~~~~~i~nv~~~~ 132 (225)
T PF12708_consen 69 LSGSGDSFSVV-PGIGVFDSGNSNIGIQIRN-LTIDGNGIDPN--------------NNNNGIRFNSSQNVSISNVRIEN 132 (225)
T ss_dssp ECTTTSTSCCE-EEEEECCSCSCCEEEEEEE-EEEEETCGCE---------------SCEEEEEETTEEEEEEEEEEEES
T ss_pred ecCcccccccc-cceeeeecCCCCceEEEEe-eEEEcccccCC--------------CCceEEEEEeCCeEEEEeEEEEc
Confidence 2222222110 01111111 111 12444 34554443210 11356778888888888888888
Q ss_pred CCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeC-ceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC--CceE
Q 039959 212 SKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQ-SDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP--GHGI 288 (439)
Q Consensus 212 s~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~-s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~--~~Gi 288 (439)
....++.+..+....+.+..... ++.+.. +.++.+.++.+..+++++. .+.++++|+||++.. ..||
T Consensus 133 ~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~i~n~~~~~~~~~gi 202 (225)
T PF12708_consen 133 SGGDGIYFNTGTDYRIIGSTHVS--------GIFIDNGSNNVIVNNCIFNGGDNGII--LGNNNITISNNTFEGNCGNGI 202 (225)
T ss_dssp -SS-SEEEECCEECEEECCEEEE--------EEEEESCEEEEEEECEEEESSSCSEE--CEEEEEEEECEEEESSSSESE
T ss_pred cCccEEEEEccccCcEeecccce--------eeeeccceeEEEECCccccCCCceeE--eecceEEEEeEEECCccceeE
Confidence 77777777755554444433321 344433 3456667777777776632 223667777776654 2456
Q ss_pred EEeecCCCCCCCCEEEEEEEeEEEeCCcceE
Q 039959 289 SIGSLGKYTDEEDVVGINVRNCTITGTQNGV 319 (439)
Q Consensus 289 ~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi 319 (439)
.+-.. .+++++|++|.+...||
T Consensus 203 ~i~~~---------~~~~i~n~~i~~~~~g~ 224 (225)
T PF12708_consen 203 NIEGG---------SNIIISNNTIENCDDGI 224 (225)
T ss_dssp EEEEC---------SEEEEEEEEEESSSEEE
T ss_pred EEECC---------eEEEEEeEEEECCccCc
Confidence 65432 22666666666665554
No 11
>PLN02793 Probable polygalacturonase
Probab=99.85 E-value=5.6e-19 Score=181.27 Aligned_cols=220 Identities=15% Similarity=0.209 Sum_probs=170.6
Q ss_pred CCeEEEEccEEEEeecCCCCCC-------C----CceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCC
Q 039959 123 TPLIVQIQGTIKAITDISEFPG-------Q----GEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLP 191 (439)
Q Consensus 123 s~vtl~l~g~l~~~~~~~~~~~-------~----~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p 191 (439)
+++++...|+|-+.. ...|.. . .+.+|.|.+++|++|+|--..+.. .|
T Consensus 143 ~ni~ItG~G~IDG~G-~~ww~~~~~~~~~~~~~~rP~~i~f~~~~nv~v~gitl~nSp---~~----------------- 201 (443)
T PLN02793 143 NHLTVEGGGTVNGMG-HEWWAQSCKINHTNPCRHAPTAITFHKCKDLRVENLNVIDSQ---QM----------------- 201 (443)
T ss_pred ceEEEEeceEEECCC-cccccccccccCCCCccCCceEEEEEeeccEEEECeEEEcCC---Ce-----------------
Confidence 578888888887643 223321 0 145789999999999995333221 22
Q ss_pred ceeEEeeeccEEEEeeEEecC----CCeeEEEeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceE
Q 039959 192 ANIQFVEVSNAIVRGITSVNS----KGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCV 266 (439)
Q Consensus 192 ~~i~~~~~~nv~I~~v~i~ns----~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i 266 (439)
.+++.+|+|++|++++|.++ ...+|++..|+||+|+|++|.+.+ |+|.+. .|+||+|+||....|+ +|
T Consensus 202 -~i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gD-----DcIaik~~s~nI~I~n~~c~~Gh-Gi 274 (443)
T PLN02793 202 -HIAFTNCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGD-----DCISIVGNSSRIKIRNIACGPGH-GI 274 (443)
T ss_pred -EEEEEccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCC-----CeEEecCCcCCEEEEEeEEeCCc-cE
Confidence 48899999999999999874 347899999999999999999876 688885 6999999999998876 69
Q ss_pred EecC--------CceeEEEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCC---------C
Q 039959 267 GMIR--------GSSNVSVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGA---------P 328 (439)
Q Consensus 267 ~i~~--------gs~nV~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~---------~ 328 (439)
+|++ +.+||+|+||++.+. .|++|++..+ ..+.++||+|+|++|.+..++|.|..+... .
T Consensus 275 sIGSlg~~~~~~~V~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~nItf~ni~m~nv~~pI~I~q~Y~~~~~~~~~~ts 352 (443)
T PLN02793 275 SIGSLGKSNSWSEVRDITVDGAFLSNTDNGVRIKTWQG--GSGNASKITFQNIFMENVSNPIIIDQYYCDSRKPCANQTS 352 (443)
T ss_pred EEecccCcCCCCcEEEEEEEccEEeCCCceEEEEEeCC--CCEEEEEEEEEeEEEecCCceEEEEeeecCCCCCCCCCCC
Confidence 9987 269999999999765 6999998632 347899999999999999999999875421 1
Q ss_pred CcceeeEEEEeEEEeccC-ccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEec
Q 039959 329 ASHASNFMFTDIVMINVS-NPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYN 385 (439)
Q Consensus 329 ~g~v~nI~f~ni~~~~~~-~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~ 385 (439)
...++||+|+|++.+... .++.|.- .+..+++||+|+||+++..
T Consensus 353 ~v~I~nI~~~nI~Gt~~~~~ai~l~c-------------s~~~pc~ni~l~nI~l~~~ 397 (443)
T PLN02793 353 AVKVENISFVHIKGTSATEEAIKFAC-------------SDSSPCEGLYLEDVQLLSS 397 (443)
T ss_pred CeEEEeEEEEEEEEEEcccccEEEEe-------------CCCCCEeeEEEEeeEEEec
Confidence 235899999999988753 4666652 1234799999999999864
No 12
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=99.84 E-value=1.7e-18 Score=175.80 Aligned_cols=222 Identities=18% Similarity=0.204 Sum_probs=170.1
Q ss_pred CCeEEEEccEEEEeecCCCCCC---------C-CceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCc
Q 039959 123 TPLIVQIQGTIKAITDISEFPG---------Q-GEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPA 192 (439)
Q Consensus 123 s~vtl~l~g~l~~~~~~~~~~~---------~-~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~ 192 (439)
.+++|...|+|-+... ..|.. . .+.+|.|.+++|+.|+|- ++. .+..|
T Consensus 122 ~ni~I~G~G~IDG~G~-~ww~~~~~~~~~~~~~rP~~i~f~~~~nv~i~gi-tl~--nSp~w------------------ 179 (404)
T PLN02188 122 NGLTLTGGGTFDGQGA-AAWPFNKCPIRKDCKLLPTSVKFVNMNNTVVRGI-TSV--NSKFF------------------ 179 (404)
T ss_pred eeEEEEeeEEEeCCCc-ccccccccccCCCCCcCceEEEEEeeeeEEEeCe-EEE--cCCCe------------------
Confidence 4677777788876542 23421 0 145789999999999993 221 12223
Q ss_pred eeEEeeeccEEEEeeEEecCC----CeeEEEeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEE
Q 039959 193 NIQFVEVSNAIVRGITSVNSK----GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVG 267 (439)
Q Consensus 193 ~i~~~~~~nv~I~~v~i~ns~----~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~ 267 (439)
.+++..|+|++|++++|.++. ..+|++..|+||.|+|++|.+.+ |+|.+. .++||+|+|+....+. +|+
T Consensus 180 ~i~~~~~~~v~i~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~GD-----DcIaiksg~~nI~I~n~~c~~gh-Gis 253 (404)
T PLN02188 180 HIALVECRNFKGSGLKISAPSDSPNTDGIHIERSSGVYISDSRIGTGD-----DCISIGQGNSQVTITRIRCGPGH-GIS 253 (404)
T ss_pred EEEEEccccEEEEEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeCCC-----cEEEEccCCccEEEEEEEEcCCC-cEE
Confidence 589999999999999998642 47899999999999999999876 689886 5789999999998775 699
Q ss_pred ecC--------CceeEEEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCC---------CCC
Q 039959 268 MIR--------GSSNVSVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPG---------APA 329 (439)
Q Consensus 268 i~~--------gs~nV~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g---------~~~ 329 (439)
+++ +.+||+|+||++.+. +|++|++....++.+.++||+|+|++|.+...+|.|..... ...
T Consensus 254 iGSlG~~~~~~~V~nV~v~n~~~~~t~~GiriKt~~g~~~~G~v~nI~f~ni~m~~v~~pI~i~~~Y~~~~~~~~~~~s~ 333 (404)
T PLN02188 254 VGSLGRYPNEGDVTGLVVRDCTFTGTTNGIRIKTWANSPGKSAATNMTFENIVMNNVTNPIIIDQKYCPFYSCESKYPSG 333 (404)
T ss_pred eCCCCCCCcCCcEEEEEEEeeEEECCCcEEEEEEecCCCCceEEEEEEEEeEEecCccceEEEEccccCCCCCCcCCCCC
Confidence 987 269999999999875 69999985333345789999999999999999999976321 113
Q ss_pred cceeeEEEEeEEEeccC-ccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEec
Q 039959 330 SHASNFMFTDIVMINVS-NPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYN 385 (439)
Q Consensus 330 g~v~nI~f~ni~~~~~~-~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~ 385 (439)
..++||+|+||+.+... .++.+.. .+..+++||+|+||+++..
T Consensus 334 v~I~nIt~~nI~gt~~~~~a~~l~c-------------s~~~pc~ni~~~nV~i~~~ 377 (404)
T PLN02188 334 VTLSDIYFKNIRGTSSSQVAVLLKC-------------SRGVPCQGVYLQDVHLDLS 377 (404)
T ss_pred cEEEeEEEEEEEEEecCceEEEEEE-------------CCCCCEeeEEEEeeEEEec
Confidence 56899999999998753 4555542 1234799999999999864
No 13
>PLN03010 polygalacturonase
Probab=99.83 E-value=6.4e-18 Score=171.31 Aligned_cols=198 Identities=19% Similarity=0.253 Sum_probs=159.0
Q ss_pred ceeEEeeeccEEEEeeEEecCC---Ce-eEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEec-----C
Q 039959 192 ANIQFVEVSNAIVRGITSVNSK---GF-HYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGT-----G 262 (439)
Q Consensus 192 ~~i~~~~~~nv~I~~v~i~ns~---~~-~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~-----g 262 (439)
..+.|.+++|+.|.|--..+.. .| .+.+..|+|++|+++++.+++. .-+++..|++|+|++..|.+ .
T Consensus 131 ~wi~f~~v~nv~I~G~G~IDG~G~~ww~~l~~~~~~nv~v~gitl~nsp~----~~i~i~~~~nv~i~~i~I~a~~~s~N 206 (409)
T PLN03010 131 MWISFSTVSGLMIDGSGTIDGRGSSFWEALHISKCDNLTINGITSIDSPK----NHISIKTCNYVAISKINILAPETSPN 206 (409)
T ss_pred ceEEEecccccEEeeceEEeCCCccccceEEEEeecCeEEeeeEEEcCCc----eEEEEeccccEEEEEEEEeCCCCCCC
Confidence 4588999999999986555543 23 5889999999999999998653 45889999999999999986 4
Q ss_pred CceEEecCCceeEEEEeeEecCCc-eEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCC-CCcceeeEEEEeE
Q 039959 263 DDCVGMIRGSSNVSVKKVTCGPGH-GISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGA-PASHASNFMFTDI 340 (439)
Q Consensus 263 DD~i~i~~gs~nV~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~-~~g~v~nI~f~ni 340 (439)
.|+|.+.+ ++||+|+||++..++ .|+|++. -.++.|+++.+...+ |+.|+|.... ....|+||+|+|+
T Consensus 207 TDGiDi~~-s~nV~I~n~~I~~gDDcIaiksg--------s~ni~I~~~~C~~gH-GisIGS~g~~~~~~~V~nV~v~n~ 276 (409)
T PLN03010 207 TDGIDISY-STNINIFDSTIQTGDDCIAINSG--------SSNINITQINCGPGH-GISVGSLGADGANAKVSDVHVTHC 276 (409)
T ss_pred CCceeeec-cceEEEEeeEEecCCCeEEecCC--------CCcEEEEEEEeECcC-CEEEccCCCCCCCCeeEEEEEEee
Confidence 68999987 899999999999876 6999863 246778888887664 8999987431 1246999999999
Q ss_pred EEeccCccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEecCCceEEEee-c--C---------CCCeecEEEEeE
Q 039959 341 VMINVSNPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYNTESGVTLIC-S--S---------GVPCENIHLIDI 408 (439)
Q Consensus 341 ~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~~~~~i~i~~-~--~---------~~~~~~I~~~nv 408 (439)
++.+..++++|+.. ....+.++||+|+||+++.. +.|+.+.- + . ...++||+|+||
T Consensus 277 ~i~~t~~GirIKt~-----------~G~~G~v~nItf~nI~m~~v-~~pI~I~q~Y~~~~~~~~~~~s~v~Isdi~~~ni 344 (409)
T PLN03010 277 TFNQTTNGARIKTW-----------QGGQGYARNISFENITLINT-KNPIIIDQQYIDKGKLDATKDSAVAISNVKYVGF 344 (409)
T ss_pred EEeCCCcceEEEEe-----------cCCCEEEEEeEEEeEEEecC-CccEEEEeeccCCCCCCCCCCCceEEEeEEEEee
Confidence 99999999999985 23456999999999999984 67777752 1 1 125899999999
Q ss_pred EEecCCC
Q 039959 409 NLNPTEP 415 (439)
Q Consensus 409 ~~~~~~~ 415 (439)
+.+....
T Consensus 345 ~GT~~~~ 351 (409)
T PLN03010 345 RGTTSNE 351 (409)
T ss_pred EEEeCCC
Confidence 9987654
No 14
>PLN02218 polygalacturonase ADPG
Probab=99.83 E-value=4.4e-18 Score=173.91 Aligned_cols=198 Identities=18% Similarity=0.191 Sum_probs=159.2
Q ss_pred ceeEEeeeccEEEEee---EEecC-------------------CCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCc
Q 039959 192 ANIQFVEVSNAIVRGI---TSVNS-------------------KGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQS 249 (439)
Q Consensus 192 ~~i~~~~~~nv~I~~v---~i~ns-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s 249 (439)
..|.|.+.+|++|.|- +|... .-..+.+..|+|++|+++++.+++. ..+++..|
T Consensus 148 ~wi~~~~~~ni~I~G~~~GtIDG~G~~WW~~~~~~~~~~~~~~rP~~i~f~~~~nv~I~gitl~nSp~----w~i~~~~~ 223 (431)
T PLN02218 148 KWIMFDGVNNLSVDGGSTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLRVRNAQQ----IQISIEKC 223 (431)
T ss_pred cCEEEecCcEEEEECCCCcEEeCCchhhhhcccccCCcCccCcCCEEEEEEccccEEEeCeEEEcCCC----EEEEEEce
Confidence 4588899999999882 23211 0124788999999999999998653 46899999
Q ss_pred eeEEEEeeEEec-----CCceEEecCCceeEEEEeeEecCCc-eEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEe
Q 039959 250 DVVKIAKSYIGT-----GDDCVGMIRGSSNVSVKKVTCGPGH-GISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKT 323 (439)
Q Consensus 250 ~nv~I~n~~i~~-----gDD~i~i~~gs~nV~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks 323 (439)
+||+|+|.+|.+ ..|+|.+.+ ++||+|+||++..++ .|+|++. .+||+|+||++...+ |+.|+|
T Consensus 224 ~nV~i~~v~I~a~~~spNTDGIdi~s-s~nV~I~n~~I~tGDDcIaIksg--------s~nI~I~n~~c~~GH-GisIGS 293 (431)
T PLN02218 224 SNVQVSNVVVTAPADSPNTDGIHITN-TQNIRVSNSIIGTGDDCISIESG--------SQNVQINDITCGPGH-GISIGS 293 (431)
T ss_pred eeEEEEEEEEeCCCCCCCCCcEeecc-cceEEEEccEEecCCceEEecCC--------CceEEEEeEEEECCC-CEEECc
Confidence 999999999987 569999988 899999999999886 5999852 589999999998764 899988
Q ss_pred cCCC-CCcceeeEEEEeEEEeccCccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEecCCceEEEeec-------
Q 039959 324 WPGA-PASHASNFMFTDIVMINVSNPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYNTESGVTLICS------- 395 (439)
Q Consensus 324 ~~g~-~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~~~~~i~i~~~------- 395 (439)
.... ..+.|+||+|+|+++.+..++++|++. ....+.++||+|+||++... ..|+.+...
T Consensus 294 ~g~~~~~~~V~nV~v~n~~~~~t~nGvRIKT~-----------~Gg~G~v~nI~f~ni~m~~V-~~pI~Idq~Y~~~~~~ 361 (431)
T PLN02218 294 LGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY-----------QGGSGTASNIIFQNIQMENV-KNPIIIDQDYCDKSKC 361 (431)
T ss_pred CCCCCCCceEEEEEEEccEEecCCcceEEeec-----------CCCCeEEEEEEEEeEEEEcc-cccEEEEeeccCCCCC
Confidence 6422 246899999999999999999999984 23456999999999999985 567777521
Q ss_pred -C---CCCeecEEEEeEEEecCCC
Q 039959 396 -S---GVPCENIHLIDINLNPTEP 415 (439)
Q Consensus 396 -~---~~~~~~I~~~nv~~~~~~~ 415 (439)
. ...++||+|+||+.+.+.+
T Consensus 362 ~~~~s~v~I~nI~~~NI~gtsa~~ 385 (431)
T PLN02218 362 TSQQSAVQVKNVVYRNISGTSASD 385 (431)
T ss_pred CCCCCCeEEEEEEEEeEEEEecCC
Confidence 1 1248999999999987643
No 15
>PLN03003 Probable polygalacturonase At3g15720
Probab=99.83 E-value=6.2e-18 Score=172.55 Aligned_cols=198 Identities=18% Similarity=0.205 Sum_probs=160.0
Q ss_pred ceeEEeeeccEEEEeeEEecCC-----------CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEe
Q 039959 192 ANIQFVEVSNAIVRGITSVNSK-----------GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIG 260 (439)
Q Consensus 192 ~~i~~~~~~nv~I~~v~i~ns~-----------~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~ 260 (439)
..|.|.++++++|.|--..+.. -..+++..|+|+.|+++++.+++. ..+++..|++|+|++.+|.
T Consensus 105 ~wI~f~~~~~i~I~G~GtIDGqG~~wW~~~~~rP~~l~f~~~~nv~I~gitl~NSp~----w~i~i~~c~nV~i~~l~I~ 180 (456)
T PLN03003 105 QWILFTDIEGLVIEGDGEINGQGSSWWEHKGSRPTALKFRSCNNLRLSGLTHLDSPM----AHIHISECNYVTISSLRIN 180 (456)
T ss_pred ceEEEEcccceEEeccceEeCCchhhhhcccCCceEEEEEecCCcEEeCeEEecCCc----EEEEEeccccEEEEEEEEe
Confidence 4799999999999984433322 125899999999999999998653 4688999999999999998
Q ss_pred c-----CCceEEecCCceeEEEEeeEecCCc-eEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCC-CCccee
Q 039959 261 T-----GDDCVGMIRGSSNVSVKKVTCGPGH-GISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGA-PASHAS 333 (439)
Q Consensus 261 ~-----gDD~i~i~~gs~nV~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~-~~g~v~ 333 (439)
+ ..|+|.+.+ ++||+|+||.+..++ .|+|++. .+||+|+|+++...+ ||.|+|.... ..+.|+
T Consensus 181 ap~~spNTDGIDi~~-S~nV~I~n~~I~tGDDCIaiksg--------s~NI~I~n~~c~~GH-GISIGSlg~~g~~~~V~ 250 (456)
T PLN03003 181 APESSPNTDGIDVGA-SSNVVIQDCIIATGDDCIAINSG--------TSNIHISGIDCGPGH-GISIGSLGKDGETATVE 250 (456)
T ss_pred CCCCCCCCCcEeecC-cceEEEEecEEecCCCeEEeCCC--------CccEEEEeeEEECCC-CeEEeeccCCCCcceEE
Confidence 7 468999988 899999999999876 5999852 489999999998764 9999987421 135699
Q ss_pred eEEEEeEEEeccCccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEecCCceEEEeec--------------CCCC
Q 039959 334 NFMFTDIVMINVSNPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYNTESGVTLICS--------------SGVP 399 (439)
Q Consensus 334 nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~~~~~i~i~~~--------------~~~~ 399 (439)
||+|+|+++.+..++++|+++ ....+.++||+|+||++... ..|+.++.. ....
T Consensus 251 NV~v~n~~~~~T~nGvRIKT~-----------~Gg~G~v~nItf~nI~m~nV-~~pI~Idq~Y~~~~~~~~~~~~~s~v~ 318 (456)
T PLN03003 251 NVCVQNCNFRGTMNGARIKTW-----------QGGSGYARMITFNGITLDNV-ENPIIIDQFYNGGDSDNAKDRKSSAVE 318 (456)
T ss_pred EEEEEeeEEECCCcEEEEEEe-----------CCCCeEEEEEEEEeEEecCc-cceEEEEcccCCCCCCCcccCCCCCcE
Confidence 999999999999999999985 23346899999999999985 467777421 0125
Q ss_pred eecEEEEeEEEecCCC
Q 039959 400 CENIHLIDINLNPTEP 415 (439)
Q Consensus 400 ~~~I~~~nv~~~~~~~ 415 (439)
++||+|+||+.+....
T Consensus 319 IsnI~f~NI~GTs~~~ 334 (456)
T PLN03003 319 VSKVVFSNFIGTSKSE 334 (456)
T ss_pred EEeEEEEeEEEEeCcc
Confidence 8999999999986654
No 16
>PLN02155 polygalacturonase
Probab=99.82 E-value=1.1e-17 Score=169.18 Aligned_cols=220 Identities=15% Similarity=0.209 Sum_probs=165.9
Q ss_pred CCeEEEEccEEEEeecCCCCCC----C----CceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCcee
Q 039959 123 TPLIVQIQGTIKAITDISEFPG----Q----GEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANI 194 (439)
Q Consensus 123 s~vtl~l~g~l~~~~~~~~~~~----~----~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i 194 (439)
.+++|.. |+|-+... ..|.. . ....+.+.+++|++|+|- ++. .+.. ..+
T Consensus 115 ~~i~i~G-G~iDGqG~-~ww~~~~~~~~~~~~p~~i~~~~~~nv~i~gi-tl~--nSp~------------------w~i 171 (394)
T PLN02155 115 NRFSLVG-GTFDARAN-GFWSCRKSGQNCPPGVRSISFNSAKDVIISGV-KSM--NSQV------------------SHM 171 (394)
T ss_pred CCCEEEc-cEEecCce-eEEEcccCCCCCCCcccceeEEEeeeEEEECe-EEE--cCCC------------------eEE
Confidence 5677765 77765332 22211 0 124689999999999993 221 1122 358
Q ss_pred EEeeeccEEEEeeEEecCC----CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeC-ceeEEEEeeEEecCCceEEec
Q 039959 195 QFVEVSNAIVRGITSVNSK----GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQ-SDVVKIAKSYIGTGDDCVGMI 269 (439)
Q Consensus 195 ~~~~~~nv~I~~v~i~ns~----~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~-s~nv~I~n~~i~~gDD~i~i~ 269 (439)
++.+|+|++|++++|.++. ..+|++..|+||.|+|++|.+.+ |+|.+.+ |+||+|+||.+..|+ +|+|+
T Consensus 172 ~~~~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gD-----DcIaik~gs~nI~I~n~~c~~Gh-GisIG 245 (394)
T PLN02155 172 TLNGCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGD-----DCVAIGPGTRNFLITKLACGPGH-GVSIG 245 (394)
T ss_pred EEECeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCC-----ceEEcCCCCceEEEEEEEEECCc-eEEec
Confidence 8999999999999998743 37899999999999999999876 6888875 789999999999875 69998
Q ss_pred CC--------ceeEEEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCC---------CCcc
Q 039959 270 RG--------SSNVSVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGA---------PASH 331 (439)
Q Consensus 270 ~g--------s~nV~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~---------~~g~ 331 (439)
+- .+||+|+||++.+. .|++|++..+ ++.+.|+||+|+|++|.+..++|.|...... ....
T Consensus 246 S~g~~~~~~~V~nV~v~n~~~~~t~~GirIKT~~~-~~gG~v~nI~f~ni~m~~v~~pI~i~q~Y~~~~~~~~~~~s~v~ 324 (394)
T PLN02155 246 SLAKELNEDGVENVTVSSSVFTGSQNGVRIKSWAR-PSTGFVRNVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEYSGVK 324 (394)
T ss_pred cccccCCCCcEEEEEEEeeEEeCCCcEEEEEEecC-CCCEEEEEEEEEeEEEcCccccEEEEecccCCCCCCcCCCCCeE
Confidence 82 49999999999765 6999998411 1357899999999999999999999754311 0136
Q ss_pred eeeEEEEeEEEeccC-ccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEec
Q 039959 332 ASNFMFTDIVMINVS-NPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTYN 385 (439)
Q Consensus 332 v~nI~f~ni~~~~~~-~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~~ 385 (439)
++||+|+|++.+... .++.+.. ....+++||+|+||+++..
T Consensus 325 i~~It~~ni~gt~~~~~a~~l~c-------------~~~~pc~~I~l~nv~i~~~ 366 (394)
T PLN02155 325 ISQVTYKNIQGTSATQEAMKLVC-------------SKSSPCTGITLQDIKLTYN 366 (394)
T ss_pred EEEEEEEeeEEEecCCceEEEEe-------------CCCCCEEEEEEEeeEEEec
Confidence 899999999998763 4555552 1234799999999999875
No 17
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=99.82 E-value=3.1e-18 Score=170.67 Aligned_cols=218 Identities=21% Similarity=0.245 Sum_probs=164.6
Q ss_pred CeEEEEccEEEEeecCCCCCCC---------CceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCcee
Q 039959 124 PLIVQIQGTIKAITDISEFPGQ---------GEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANI 194 (439)
Q Consensus 124 ~vtl~l~g~l~~~~~~~~~~~~---------~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i 194 (439)
++++...|+|-+... ..|... .+.++.+.++++++|+|.-..+ ...| .+
T Consensus 61 ni~i~G~G~IDG~G~-~w~~~~~~~~~~~~~rp~~i~~~~~~~~~i~~i~~~n---sp~w------------------~~ 118 (326)
T PF00295_consen 61 NITITGKGTIDGNGQ-AWWDGSGDANNNGQRRPRLIRFNNCKNVTIEGITIRN---SPFW------------------HI 118 (326)
T ss_dssp EEECTTSSEEE--GG-GTCSSCTTHCCSSSSSSESEEEEEEEEEEEESEEEES----SSE------------------SE
T ss_pred EEEecCCceEcCchh-hhhccccccccccccccceeeeeeecceEEEeeEecC---CCee------------------EE
Confidence 444444567776433 233211 2567999999999999942221 1223 48
Q ss_pred EEeeeccEEEEeeEEecCC----CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCce-eEEEEeeEEecCCceEEec
Q 039959 195 QFVEVSNAIVRGITSVNSK----GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSD-VVKIAKSYIGTGDDCVGMI 269 (439)
Q Consensus 195 ~~~~~~nv~I~~v~i~ns~----~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~-nv~I~n~~i~~gDD~i~i~ 269 (439)
++.+|+|++|++++|.++. ..++++..|+||+|+|+.|.+.+ |+|.+.+.+ ||+|+||++..+. +++++
T Consensus 119 ~~~~~~nv~i~~i~I~~~~~~~NtDGid~~~s~nv~I~n~~i~~gD-----D~Iaiks~~~ni~v~n~~~~~gh-GisiG 192 (326)
T PF00295_consen 119 HINDCDNVTISNITINNPANSPNTDGIDIDSSKNVTIENCFIDNGD-----DCIAIKSGSGNILVENCTCSGGH-GISIG 192 (326)
T ss_dssp EEESEEEEEEESEEEEEGGGCTS--SEEEESEEEEEEESEEEESSS-----ESEEESSEECEEEEESEEEESSS-EEEEE
T ss_pred EEEccCCeEEcceEEEecCCCCCcceEEEEeeeEEEEEEeeccccc-----CcccccccccceEEEeEEEeccc-cceee
Confidence 8999999999999998754 36899999999999999999865 689998765 9999999998765 48887
Q ss_pred C---C-----ceeEEEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCC--------CCcce
Q 039959 270 R---G-----SSNVSVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGA--------PASHA 332 (439)
Q Consensus 270 ~---g-----s~nV~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~--------~~g~v 332 (439)
+ + .+||+++||++.+. +|++|++.- ++.+.|+||+|+|++|.+...++.|...... ....+
T Consensus 193 S~~~~~~~~~i~nV~~~n~~i~~t~~gi~iKt~~--~~~G~v~nI~f~ni~~~~v~~pi~i~~~y~~~~~~~~~~~~~~i 270 (326)
T PF00295_consen 193 SEGSGGSQNDIRNVTFENCTIINTDNGIRIKTWP--GGGGYVSNITFENITMENVKYPIFIDQDYRDGGPCGKPPSGVSI 270 (326)
T ss_dssp EESSSSE--EEEEEEEEEEEEESESEEEEEEEET--TTSEEEEEEEEEEEEEEEESEEEEEEEEECTTEESSCSSSSSEE
T ss_pred eccCCccccEEEeEEEEEEEeeccceEEEEEEec--ccceEEeceEEEEEEecCCceEEEEEeccccccccCcccCCceE
Confidence 6 2 38999999999765 689999852 2458899999999999999999998754211 13479
Q ss_pred eeEEEEeEEEeccC-ccEEEEeeeCCCCCCCCCCCCCceeEEeEEEEeEEEEe
Q 039959 333 SNFMFTDIVMINVS-NPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFKNISGTY 384 (439)
Q Consensus 333 ~nI~f~ni~~~~~~-~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~nI~~~~ 384 (439)
+||+|+||+.+... .++.|.. .+..+++||+|+||.++.
T Consensus 271 ~nI~~~nitg~~~~~~~i~i~~-------------~~~~~~~ni~f~nv~i~~ 310 (326)
T PF00295_consen 271 SNITFRNITGTSAGSSAISIDC-------------SPGSPCSNITFENVNITG 310 (326)
T ss_dssp EEEEEEEEEEEESTSEEEEEE--------------BTTSSEEEEEEEEEEEES
T ss_pred EEEEEEeeEEEeccceEEEEEE-------------CCcCcEEeEEEEeEEEEc
Confidence 99999999998876 5666652 123479999999999988
No 18
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=99.77 E-value=3.7e-16 Score=158.07 Aligned_cols=272 Identities=16% Similarity=0.170 Sum_probs=154.9
Q ss_pred CcEEEEcCcEEEEee---EEeeCccCCCC-eEEEEc-cEEEEeecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCcc
Q 039959 99 KARLVIPRGTFVLGP---VTFMGPCNNTP-LIVQIQ-GTIKAITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASC 173 (439)
Q Consensus 99 ~~~v~~P~G~y~~~~---i~l~g~~~~s~-vtl~l~-g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~ 173 (439)
..+|||+||+|.+++ ++|. ++ .+++++ |.++. +++.+....+|+.|.|.|+++|..-.|
T Consensus 232 ~~~lYF~PGVy~ig~~~~l~L~-----sn~~~VYlApGAyVk-----------GAf~~~~~~~nv~i~G~GVLSGe~Yvy 295 (582)
T PF03718_consen 232 KDTLYFKPGVYWIGSDYHLRLP-----SNTKWVYLAPGAYVK-----------GAFEYTDTQQNVKITGRGVLSGEQYVY 295 (582)
T ss_dssp SSEEEE-SEEEEEBCTC-EEE------TT--EEEE-TTEEEE-----------S-EEE---SSEEEEESSSEEE-TTS-T
T ss_pred cceEEeCCceEEeCCCccEEEC-----CCccEEEEcCCcEEE-----------EEEEEccCCceEEEEeeEEEcCcceeE
Confidence 379999999999975 7884 56 488987 65443 444455678999999999999987665
Q ss_pred ccccCCCCCC-----CCCCcC-CCceeE---EeeeccEEEEeeEEecCCCeeEEEecee----cEEEEeEEEECCCCCCC
Q 039959 174 WKYRDTKNDN-----NVPGQR-LPANIQ---FVEVSNAIVRGITSVNSKGFHYFITGCK----NIRLYHLNIIAPDESPN 240 (439)
Q Consensus 174 w~~~~~~~~~-----~~p~~~-~p~~i~---~~~~~nv~I~~v~i~ns~~~~i~~~~~~----nv~i~n~~i~~~~~~~n 240 (439)
.... .+.+ ...++. .-+++. ...+.+++++|++|.++|+|.+.+.+-. +..|+|.++...++ .+
T Consensus 296 ~A~~--~e~y~~~s~A~~~~~~~lkm~~~~~~~g~q~~~~~GiTI~~pP~~Sm~l~g~~~~~~~~~i~nyKqVGaW~-~q 372 (582)
T PF03718_consen 296 EADT--EESYLHLSGAVKCHRESLKMLWHISANGGQTLTCEGITINDPPFHSMDLYGNENDKFSMNISNYKQVGAWY-FQ 372 (582)
T ss_dssp TBBC--CCTTSB-SSC---TTTB--SEEECS-SSSEEEEEES-EEE--SS-SEEEESSSGGGEEEEEEEEEEE---C-TT
T ss_pred eccC--CCCccccccccccchhhhhhhhhhccCCcceEEEEeeEecCCCcceEEecCCccccccceeeceeeeeeEE-ec
Confidence 3211 1111 000111 113444 3446699999999999999999998544 58999999998664 89
Q ss_pred CCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCc-e--EEEeecCCCCCCCCEEEEEEEeEEEeCCc-
Q 039959 241 TDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGH-G--ISIGSLGKYTDEEDVVGINVRNCTITGTQ- 316 (439)
Q Consensus 241 ~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~-G--i~igs~g~~~~~~~v~nI~v~n~~~~~~~- 316 (439)
+|||.+.. +-+|+||++++.||+|.+.. +++.|+||+++..+ | +.+|.. ...++||+|+|+.+.++.
T Consensus 373 tDGi~ly~--nS~i~dcF~h~nDD~iKlYh--S~v~v~~~ViWk~~Ngpiiq~GW~-----pr~isnv~veni~IIh~r~ 443 (582)
T PF03718_consen 373 TDGIELYP--NSTIRDCFIHVNDDAIKLYH--SNVSVSNTVIWKNENGPIIQWGWT-----PRNISNVSVENIDIIHNRW 443 (582)
T ss_dssp ----B--T--T-EEEEEEEEESS-SEE--S--TTEEEEEEEEEE-SSS-SEE--CS--------EEEEEEEEEEEEE---
T ss_pred cCCccccC--CCeeeeeEEEecCchhheee--cCcceeeeEEEecCCCCeEEeecc-----ccccCceEEeeeEEEeeee
Confidence 99999984 67889999999999997776 69999999998654 3 667653 466999999999999872
Q ss_pred --------ceEEEEe--cC--CC-C----CcceeeEEEEeEEEeccCc-cEEEEeeeCCCCCCCCCCCCCceeEEeEEEE
Q 039959 317 --------NGVRVKT--WP--GA-P----ASHASNFMFTDIVMINVSN-PIIIDQEYCPSNSCKSTSEPSLVKLSNIHFK 378 (439)
Q Consensus 317 --------~gi~Iks--~~--g~-~----~g~v~nI~f~ni~~~~~~~-~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~ 378 (439)
.+|.--+ +. ++ . .-.|++++|+|+++++.-. .++|... ...+|+.++
T Consensus 444 ~~~~~~~n~~I~~ss~~y~~~~s~~~adp~~ti~~~~~~nv~~EG~~~~l~ri~pl---------------qn~~nl~ik 508 (582)
T PF03718_consen 444 IWHNNYVNTAILGSSPFYDDMASTKTADPSTTIRNMTFSNVRCEGMCPCLFRIYPL---------------QNYDNLVIK 508 (582)
T ss_dssp SSGGCTTT-ECEEE--BTTS-SSS--BEEEEEEEEEEEEEEEEECCE-ECEEE--S---------------EEEEEEEEE
T ss_pred ecccCCCCceeEecccccccccCCCCCCcccceeeEEEEeEEEecccceeEEEeec---------------CCCcceEEE
Confidence 3443222 21 11 0 1247899999999998765 3455431 144556666
Q ss_pred eEEEEecC-----CceEEEe---ec---CCCCeecEEEEeEEEecC
Q 039959 379 NISGTYNT-----ESGVTLI---CS---SGVPCENIHLIDINLNPT 413 (439)
Q Consensus 379 nI~~~~~~-----~~~i~i~---~~---~~~~~~~I~~~nv~~~~~ 413 (439)
|+....-. .....+- .. ......+|.|+|.++..+
T Consensus 509 N~~~~~w~~~~~~~~~s~~k~~~~~~~~~~~~~~gi~i~N~tVgg~ 554 (582)
T PF03718_consen 509 NVHFESWNGLDITSQVSGLKAYYNMANNKQNDTMGIIIENWTVGGE 554 (582)
T ss_dssp EEEECEET-CGCSTT-EEE---CCTTT--B--EEEEEEEEEEETTE
T ss_pred EeecccccCcccccceeeccccccccccccccccceEEEeEEECCE
Confidence 66554211 1111111 11 122478999999988644
No 19
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.65 E-value=1.7e-14 Score=142.80 Aligned_cols=196 Identities=21% Similarity=0.291 Sum_probs=113.1
Q ss_pred HHHHHHHHhhcCCCcEEEEcCcEEEE-eeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEecce
Q 039959 86 FVKAFEAACHHEGKARLVIPRGTFVL-GPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVTGSG 164 (439)
Q Consensus 86 ~~~A~~~a~~~~~~~~v~~P~G~y~~-~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~G 164 (439)
||+|+++| +.|.+|+||+|+|.+ +++.+. +++++|+..|. +..
T Consensus 1 iQ~Ai~~A---~~GDtI~l~~G~Y~~~~~l~I~----~~~Iti~G~g~-----------------------~~t------ 44 (314)
T TIGR03805 1 LQEALIAA---QPGDTIVLPEGVFQFDRTLSLD----ADGVTIRGAGM-----------------------DET------ 44 (314)
T ss_pred CHhHHhhC---CCCCEEEECCCEEEcceeEEEe----CCCeEEEecCC-----------------------Ccc------
Confidence 68897765 557899999999987 577775 46677765431 001
Q ss_pred EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCC---CCCC
Q 039959 165 TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDE---SPNT 241 (439)
Q Consensus 165 tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~---~~n~ 241 (439)
+||+.++.. ....+ ...+++++|+++++.++..+++.+..|++++|+++++..... ....
T Consensus 45 vid~~~~~~----------------~~~~i-~v~a~~VtI~~ltI~~~~~~GI~v~~s~~i~I~n~~i~~~~~~~~~~~~ 107 (314)
T TIGR03805 45 ILDFSGQVG----------------GAEGL-LVTSDDVTLSDLAVENTKGDGVKVKGSDGIIIRRLRVEWTGGPKSSNGA 107 (314)
T ss_pred EEecccCCC----------------CCceE-EEEeCCeEEEeeEEEcCCCCeEEEeCCCCEEEEeeEEEeccCccccCCc
Confidence 223222110 01123 224667777777777766667777777777777777653211 1234
Q ss_pred CceeeeCceeEEEEeeEEecC-CceEEecCCceeEEEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceE
Q 039959 242 DGIHISQSDVVKIAKSYIGTG-DDCVGMIRGSSNVSVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGV 319 (439)
Q Consensus 242 DGI~i~~s~nv~I~n~~i~~g-DD~i~i~~gs~nV~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi 319 (439)
+||.+..|++++|++|+++.. |++|.++. +++++|+||++... .||.+.. ..++.|+|+++.+...|+
T Consensus 108 ~GI~~~~s~~v~I~~n~i~g~~d~GIyv~~-s~~~~v~nN~~~~n~~GI~i~~---------S~~~~v~~N~~~~N~~Gi 177 (314)
T TIGR03805 108 YGIYPVESTNVLVEDSYVRGASDAGIYVGQ-SQNIVVRNNVAEENVAGIEIEN---------SQNADVYNNIATNNTGGI 177 (314)
T ss_pred ceEEEeccCCEEEECCEEECCCcccEEECC-CCCeEEECCEEccCcceEEEEe---------cCCcEEECCEEeccceeE
Confidence 667777777777777777663 34666654 56777777766543 3555532 144566666666666666
Q ss_pred EEEecCCCCCcceeeEEEEeEEEec
Q 039959 320 RVKTWPGAPASHASNFMFTDIVMIN 344 (439)
Q Consensus 320 ~Iks~~g~~~g~v~nI~f~ni~~~~ 344 (439)
.+-..++.....-+++++++.++.+
T Consensus 178 ~v~~~p~~~~~~s~~~~v~~N~i~~ 202 (314)
T TIGR03805 178 LVFDLPGLPQPGGSNVRVFDNIIFD 202 (314)
T ss_pred EEeecCCCCcCCccceEEECCEEEC
Confidence 6644433211223455555555543
No 20
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=99.42 E-value=2.9e-12 Score=133.00 Aligned_cols=154 Identities=21% Similarity=0.208 Sum_probs=130.6
Q ss_pred CCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCC----ceEEecCCceeEEEEeeEecCCc-e
Q 039959 213 KGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGD----DCVGMIRGSSNVSVKKVTCGPGH-G 287 (439)
Q Consensus 213 ~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gD----D~i~i~~gs~nV~I~n~~~~~~~-G 287 (439)
+..++++..|.||.+++++|.+++. .++|+..|+|++++|.+|.+.+ |++.+.+ |+||+|++|+|..++ .
T Consensus 237 rp~~~~l~~c~NV~~~g~~i~ns~~----~~~h~~~~~nl~~~nl~I~~~~~~NtDG~d~~s-c~NvlI~~~~fdtgDD~ 311 (542)
T COG5434 237 RPRTVVLKGCRNVLLEGLNIKNSPL----WTVHPVDCDNLTFRNLTIDANRFDNTDGFDPGS-CSNVLIEGCRFDTGDDC 311 (542)
T ss_pred CCceEEEeccceEEEeeeEecCCCc----EEEeeecccCceecceEEECCCCCCCCcccccc-ceeEEEeccEEecCCce
Confidence 4467999999999999999999753 6899999999999999999854 5899888 999999999998875 5
Q ss_pred EEEeecCCCC---CCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEEEEeeeCCCCCCCCC
Q 039959 288 ISIGSLGKYT---DEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPIIIDQEYCPSNSCKST 364 (439)
Q Consensus 288 i~igs~g~~~---~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~ 364 (439)
|.++|...-. -.+.-++|+|+||+|...+.++.+.++. +|.++||++||+.|.+...+++|++.
T Consensus 312 I~iksg~~~~~~~~~~~~~~i~i~~c~~~~ghG~~v~Gse~---~ggv~ni~ved~~~~~~d~GLRikt~---------- 378 (542)
T COG5434 312 IAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGHGGLVLGSEM---GGGVQNITVEDCVMDNTDRGLRIKTN---------- 378 (542)
T ss_pred EEeecccCCcccccccccccEEEecceecccccceEeeeec---CCceeEEEEEeeeeccCcceeeeeee----------
Confidence 9988743321 1134699999999999999999999886 57899999999999999999999975
Q ss_pred CCCCceeEEeEEEEeEEEEec
Q 039959 365 SEPSLVKLSNIHFKNISGTYN 385 (439)
Q Consensus 365 ~~~~~~~i~nI~f~nI~~~~~ 385 (439)
...++.++||+|+++.+...
T Consensus 379 -~~~gG~v~nI~~~~~~~~nv 398 (542)
T COG5434 379 -DGRGGGVRNIVFEDNKMRNV 398 (542)
T ss_pred -cccceeEEEEEEecccccCc
Confidence 23457999999999998765
No 21
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=98.68 E-value=3.8e-06 Score=83.42 Aligned_cols=153 Identities=13% Similarity=0.156 Sum_probs=114.8
Q ss_pred eeEEeeeccEEEEeeEEec-------CCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCce
Q 039959 193 NIQFVEVSNAIVRGITSVN-------SKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDC 265 (439)
Q Consensus 193 ~i~~~~~~nv~I~~v~i~n-------s~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~ 265 (439)
.|.+..|++++|+++++.. ...++|.+..|++++|+++++....+ +||.+..|++++|++++++....+
T Consensus 79 GI~v~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d----~GIyv~~s~~~~v~nN~~~~n~~G 154 (314)
T TIGR03805 79 GVKVKGSDGIIIRRLRVEWTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASD----AGIYVGQSQNIVVRNNVAEENVAG 154 (314)
T ss_pred eEEEeCCCCEEEEeeEEEeccCccccCCcceEEEeccCCEEEECCEEECCCc----ccEEECCCCCeEEECCEEccCcce
Confidence 5888899999999999861 34689999999999999999987432 599999999999999999999999
Q ss_pred EEecCCceeEEEEeeEecC-CceEEEeecCCCCCCCCEEEEEEEeEEEeCCcc-eEE-----EEecCCCCCcce----ee
Q 039959 266 VGMIRGSSNVSVKKVTCGP-GHGISIGSLGKYTDEEDVVGINVRNCTITGTQN-GVR-----VKTWPGAPASHA----SN 334 (439)
Q Consensus 266 i~i~~gs~nV~I~n~~~~~-~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~-gi~-----Iks~~g~~~g~v----~n 334 (439)
|.+.. +.++.|+++.+.. ..|+.+-++-.. .....++++|+++++.+... .+. +...+.+ .|.+ ++
T Consensus 155 I~i~~-S~~~~v~~N~~~~N~~Gi~v~~~p~~-~~~~s~~~~v~~N~i~~n~~~n~~~~gn~v~~~~~g-~Gi~i~~~~~ 231 (314)
T TIGR03805 155 IEIEN-SQNADVYNNIATNNTGGILVFDLPGL-PQPGGSNVRVFDNIIFDNNTPNFAPAGSIVASVPAG-TGVVVMANRD 231 (314)
T ss_pred EEEEe-cCCcEEECCEEeccceeEEEeecCCC-CcCCccceEEECCEEECCCCCCCcccCCceecCCCC-cEEEEEcccc
Confidence 99986 7899999999865 457877443111 12345899999999987631 111 1111211 2332 88
Q ss_pred EEEEeEEEeccCc-cEEEE
Q 039959 335 FMFTDIVMINVSN-PIIID 352 (439)
Q Consensus 335 I~f~ni~~~~~~~-~i~I~ 352 (439)
+.|+|.++.+... ++.+.
T Consensus 232 v~I~~N~i~~n~~~~i~~~ 250 (314)
T TIGR03805 232 VEIFGNVISNNDTANVLIS 250 (314)
T ss_pred eEEECCEEeCCcceeEEEE
Confidence 9999999998875 55554
No 22
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=98.64 E-value=2.9e-07 Score=86.52 Aligned_cols=125 Identities=22% Similarity=0.295 Sum_probs=87.9
Q ss_pred EEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCC---CC--CCCcee------eeCceeEEEEeeEEecCC
Q 039959 195 QFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDE---SP--NTDGIH------ISQSDVVKIAKSYIGTGD 263 (439)
Q Consensus 195 ~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~---~~--n~DGI~------i~~s~nv~I~n~~i~~gD 263 (439)
.|+.|++++++++++.+++... -.|++|+++|+.+.+..- +. .-||+. +++++||.|+|+.+.+.|
T Consensus 93 ~fR~~~~i~L~nv~~~~A~Et~---W~c~~i~l~nv~~~gdYf~m~s~ni~id~l~~~GnY~Fq~~kNvei~ns~l~sKD 169 (277)
T PF12541_consen 93 MFRECSNITLENVDIPDADETL---WNCRGIKLKNVQANGDYFFMNSENIYIDNLVLDGNYSFQYCKNVEIHNSKLDSKD 169 (277)
T ss_pred HhhcccCcEEEeeEeCCCcccC---EEeCCeEEEeEEEeceEeeeeccceEEeceEEeCCEEeeceeeEEEEccEEeccc
Confidence 3567999999999998876432 247777777777743211 11 123333 346899999999999977
Q ss_pred ceEEecCCceeEEEEeeEecCCceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEe
Q 039959 264 DCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMI 343 (439)
Q Consensus 264 D~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~ 343 (439)
++.. ++||+|.++++. |=-+|.. .+|+++.||++.+.+ | --++.|++++|++|.
T Consensus 170 ---AFWn-~eNVtVyDS~i~---GEYLgW~--------SkNltliNC~I~g~Q-p----------LCY~~~L~l~nC~~~ 223 (277)
T PF12541_consen 170 ---AFWN-CENVTVYDSVIN---GEYLGWN--------SKNLTLINCTIEGTQ-P----------LCYCDNLVLENCTMI 223 (277)
T ss_pred ---cccc-CCceEEEcceEe---eeEEEEE--------cCCeEEEEeEEeccC-c----------cEeecceEEeCcEee
Confidence 3555 899999999886 3233322 389999999998876 3 356788999999999
Q ss_pred ccCcc
Q 039959 344 NVSNP 348 (439)
Q Consensus 344 ~~~~~ 348 (439)
+++-+
T Consensus 224 ~tdla 228 (277)
T PF12541_consen 224 DTDLA 228 (277)
T ss_pred cceee
Confidence 77543
No 23
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=98.64 E-value=5.1e-07 Score=79.32 Aligned_cols=140 Identities=23% Similarity=0.291 Sum_probs=100.7
Q ss_pred eeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCc
Q 039959 193 NIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGS 272 (439)
Q Consensus 193 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs 272 (439)
.|.+....+++|++++|.+....++++..+..++|++++|.. ...|+++....++.+++|.+.....++.+. ++
T Consensus 2 Gi~i~~~~~~~i~~~~i~~~~~~gi~~~~~~~~~i~n~~i~~-----~~~gi~~~~~~~~~i~~~~~~~~~~~i~~~-~~ 75 (158)
T PF13229_consen 2 GISINNGSNVTIRNCTISNNGGDGIHVSGSSNITIENCTISN-----GGYGIYVSGGSNVTISNNTISDNGSGIYVS-GS 75 (158)
T ss_dssp CEEETTCEC-EEESEEEESSSSECEEE-SSCESEEES-EEES-----STTSEEEECCES-EEES-EEES-SEEEECC-S-
T ss_pred EEEEECCcCeEEeeeEEEeCCCeEEEEEcCCCeEEECeEEEC-----CCcEEEEecCCCeEEECeEEEEccceEEEE-ec
Confidence 467788889999999999999999999999999999999997 346999999999999999999887777776 58
Q ss_pred eeEEEEeeEecCC--ceEEEeecCCCCCCCCEEEEEEEeEEEeCCc-ceEEEEecCCCCCcceeeEEEEeEEEeccC-cc
Q 039959 273 SNVSVKKVTCGPG--HGISIGSLGKYTDEEDVVGINVRNCTITGTQ-NGVRVKTWPGAPASHASNFMFTDIVMINVS-NP 348 (439)
Q Consensus 273 ~nV~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~-~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~-~~ 348 (439)
.+++|++|.+... .||.+.. ...+++|+++++.+.. .|+.+.... -.+++|++.++.+.. .+
T Consensus 76 ~~~~i~~~~i~~~~~~gi~~~~--------~~~~~~i~~n~~~~~~~~gi~~~~~~------~~~~~i~~n~i~~~~~~g 141 (158)
T PF13229_consen 76 SNITIENNRIENNGDYGIYISN--------SSSNVTIENNTIHNNGGSGIYLEGGS------SPNVTIENNTISNNGGNG 141 (158)
T ss_dssp CS-EEES-EEECSSS-SCE-TC--------EECS-EEES-EEECCTTSSCEEEECC--------S-EEECEEEECESSEE
T ss_pred CCceecCcEEEcCCCccEEEec--------cCCCEEEEeEEEEeCcceeEEEECCC------CCeEEEEEEEEEeCccee
Confidence 8999999999764 2677742 2467899999999976 688875432 246888888888775 56
Q ss_pred EEEE
Q 039959 349 IIID 352 (439)
Q Consensus 349 i~I~ 352 (439)
|.+.
T Consensus 142 i~~~ 145 (158)
T PF13229_consen 142 IYLI 145 (158)
T ss_dssp EE-T
T ss_pred EEEE
Confidence 5544
No 24
>smart00656 Amb_all Amb_all domain.
Probab=98.55 E-value=3.4e-06 Score=77.74 Aligned_cols=121 Identities=15% Similarity=0.167 Sum_probs=82.6
Q ss_pred eEEEeceecEEEEeEEEECCCC--CCCCCceeeeCceeEEEEeeEEecC----------CceEEecCCceeEEEEeeEec
Q 039959 216 HYFITGCKNIRLYHLNIIAPDE--SPNTDGIHISQSDVVKIAKSYIGTG----------DDCVGMIRGSSNVSVKKVTCG 283 (439)
Q Consensus 216 ~i~~~~~~nv~i~n~~i~~~~~--~~n~DGI~i~~s~nv~I~n~~i~~g----------DD~i~i~~gs~nV~I~n~~~~ 283 (439)
++.+..++||.|+|++|+.... ..+.|+|.+..+++|+|++|.+..+ |..+.++.++.+|+|++|.|.
T Consensus 33 gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~ 112 (190)
T smart00656 33 GLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFH 112 (190)
T ss_pred EEEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECceEe
Confidence 3444446677777777776432 2467999999999999999999987 555788888999999999997
Q ss_pred CCc-eEEEeecCCCCCCCCEEEEEEEeEEEeCCc-ceEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 284 PGH-GISIGSLGKYTDEEDVVGINVRNCTITGTQ-NGVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 284 ~~~-Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~-~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
..+ +.-+|+.-.. ......+|++.++.+.++. +.-++ +.| .+.+-|..+.+..
T Consensus 113 ~h~~~~liG~~d~~-~~~~~~~vT~h~N~~~~~~~R~P~~------r~g---~~hv~NN~~~n~~ 167 (190)
T smart00656 113 NHWKVMLLGHSDSD-TDDGKMRVTIAHNYFGNLRQRAPRV------RFG---YVHVYNNYYTGWT 167 (190)
T ss_pred cCCEEEEEccCCCc-cccccceEEEECcEEcCcccCCCcc------cCC---EEEEEeeEEeCcc
Confidence 554 6777764111 1122458999999997742 23333 122 3555565655554
No 25
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=98.48 E-value=7.5e-06 Score=78.40 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=87.8
Q ss_pred eEEeeeccEEEEeeEEe-cCCCeeEEEeceecEEEEeEEEECCCC-CCCCCceee-eCceeEEEEeeEEec---------
Q 039959 194 IQFVEVSNAIVRGITSV-NSKGFHYFITGCKNIRLYHLNIIAPDE-SPNTDGIHI-SQSDVVKIAKSYIGT--------- 261 (439)
Q Consensus 194 i~~~~~~nv~I~~v~i~-ns~~~~i~~~~~~nv~i~n~~i~~~~~-~~n~DGI~i-~~s~nv~I~n~~i~~--------- 261 (439)
+.+.-|.|.+|.|+--. .-..+++.+....||.|+|++|..... -++-|+|.+ ..+.||+|++|++..
T Consensus 95 ~~iki~sNkTivG~g~~a~~~g~gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h 174 (345)
T COG3866 95 ITIKIGSNKTIVGSGADATLVGGGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSH 174 (345)
T ss_pred EEEeeccccEEEeeccccEEEeceEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccC
Confidence 44555666666665421 112467777778888888888886331 244689999 789999999999986
Q ss_pred CCceEEecCCceeEEEEeeEecCCc-eEEEeecCCCCCCCCEEEEEEEeEEEeCC
Q 039959 262 GDDCVGMIRGSSNVSVKKVTCGPGH-GISIGSLGKYTDEEDVVGINVRNCTITGT 315 (439)
Q Consensus 262 gDD~i~i~~gs~nV~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nI~v~n~~~~~~ 315 (439)
+|..+.|+.++..|+|++|++...+ ++-+|+.-...-.++-.+|++.++.+.+.
T Consensus 175 ~DGl~Dik~~AnyITiS~n~fhdh~Kssl~G~sD~~~~~~~~~kvT~hhNyFkn~ 229 (345)
T COG3866 175 GDGLVDIKKDANYITISYNKFHDHDKSSLLGSSDSSNYDDGKYKVTIHHNYFKNL 229 (345)
T ss_pred CCccEEeccCCcEEEEEeeeeecCCeeeeeccCCcccccCCceeEEEeccccccc
Confidence 4566889999999999999998654 57777652211124567899999999995
No 26
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=98.44 E-value=9e-06 Score=82.62 Aligned_cols=144 Identities=17% Similarity=0.171 Sum_probs=96.7
Q ss_pred eeEEeeeccEEEEeeEEecCC------CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEec-CCce
Q 039959 193 NIQFVEVSNAIVRGITSVNSK------GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGT-GDDC 265 (439)
Q Consensus 193 ~i~~~~~~nv~I~~v~i~ns~------~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~-gDD~ 265 (439)
.+.-...++++|+|++|.++. ...|++..|++++|++++|..+. ..||.+..|+ ..|.++.|.. .+..
T Consensus 108 lIiai~A~nVTIsGLtIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg----~FGI~L~~~~-~~I~~N~I~g~~~~~ 182 (455)
T TIGR03808 108 LLSSEGADGIGLSGLTLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSG----GNGIWLETVS-GDISGNTITQIAVTA 182 (455)
T ss_pred EEEEecCCCeEEEeeEEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCC----cceEEEEcCc-ceEecceEeccccce
Confidence 455567899999999998765 34689999999999999999863 1488888887 5555555443 5556
Q ss_pred EEecCCceeEEEEeeEecCC--ceEEEeec------------------------CCCCCC---CCEEEEEEEeEEEeCCc
Q 039959 266 VGMIRGSSNVSVKKVTCGPG--HGISIGSL------------------------GKYTDE---EDVVGINVRNCTITGTQ 316 (439)
Q Consensus 266 i~i~~gs~nV~I~n~~~~~~--~Gi~igs~------------------------g~~~~~---~~v~nI~v~n~~~~~~~ 316 (439)
|.+.. +++++|+++++... .||.|-.. +.++.. -...+++|+++++.++.
T Consensus 183 I~lw~-S~g~~V~~N~I~g~RD~gi~i~r~~~~~dg~~v~~n~i~~i~a~~gg~~~~GNGI~~~~a~~v~V~gN~I~~~r 261 (455)
T TIGR03808 183 IVSFD-ALGLIVARNTIIGANDNGIEILRSAIGDDGTIVTDNRIEDIKAGPGGSGQYGNAINAFRAGNVIVRGNRIRNCD 261 (455)
T ss_pred EEEec-cCCCEEECCEEEccCCCCeEEEEeeecCCcceeeccccccccccCCCcCCccccEEEEccCCeEEECCEEeccc
Confidence 66555 67777777776542 24544322 111111 12356788888888887
Q ss_pred -ceEEEEecCCCCCcceeeEEEEeEEEeccCc-cEE
Q 039959 317 -NGVRVKTWPGAPASHASNFMFTDIVMINVSN-PII 350 (439)
Q Consensus 317 -~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~-~i~ 350 (439)
.||++.+. +|++|++.+++++.+ +++
T Consensus 262 ~dgI~~nss--------s~~~i~~N~~~~~R~~alh 289 (455)
T TIGR03808 262 YSAVRGNSA--------SNIQITGNSVSDVREVALY 289 (455)
T ss_pred cceEEEEcc--------cCcEEECcEeeeeeeeEEE
Confidence 78887542 556677777777666 554
No 27
>PRK10123 wcaM putative colanic acid biosynthesis protein; Provisional
Probab=98.37 E-value=2.1e-05 Score=74.78 Aligned_cols=286 Identities=18% Similarity=0.275 Sum_probs=139.6
Q ss_pred CCeeEEEeecCCcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEE--EEe-eEEeeCccCCCCeEEEEccEE
Q 039959 57 TAKVFNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTF--VLG-PVTFMGPCNNTPLIVQIQGTI 133 (439)
Q Consensus 57 ~~~~~~v~~~Ga~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y--~~~-~i~l~g~~~~s~vtl~l~g~l 133 (439)
+.+.+++.||-.+ |= -++|.+|+. .+.+|++|+|-- .+. ++.+ +.+-||++.|.|
T Consensus 31 ~~~~vni~dy~~~-----dw------iasfkqaf~------e~qtvvvpagl~cenint~ifi-----p~gktl~v~g~l 88 (464)
T PRK10123 31 ARQSVNINDYNPH-----DW------IASFKQAFS------EGQTVVVPAGLVCDNINTGIFI-----PPGKTLHILGSL 88 (464)
T ss_pred CCceeehhhcCcc-----cH------HHHHHHHhc------cCcEEEecCccEecccccceEe-----CCCCeEEEEEEe
Confidence 5678899999532 44 778888874 347999999952 343 4666 356788888877
Q ss_pred EEeecCCCCCCCCceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEe-eeccEEEEeeEEec-
Q 039959 134 KAITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFV-EVSNAIVRGITSVN- 211 (439)
Q Consensus 134 ~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~-~~~nv~I~~v~i~n- 211 (439)
.+... +.++..+++ .+.|.+ . ++-+.+.+. .-++..|+++.+..
T Consensus 89 ~gngr--------grfvlqdg~---qv~ge~----~-------------------g~~hnitldvrgsdc~ikgiamsgf 134 (464)
T PRK10123 89 RGNGR--------GRFVLQDGS---QVTGEE----G-------------------GSMHNITLDVRGSDCTIKGLAMSGF 134 (464)
T ss_pred ecCCc--------eeEEEecCC---EeecCC----C-------------------ceeeeEEEeeccCceEEeeeeeccc
Confidence 65221 233333332 233310 0 011111111 12334445544432
Q ss_pred CCCeeEEEece-----ecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEec-CCceEEecC--CceeEEE-----E
Q 039959 212 SKGFHYFITGC-----KNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGT-GDDCVGMIR--GSSNVSV-----K 278 (439)
Q Consensus 212 s~~~~i~~~~~-----~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~-gDD~i~i~~--gs~nV~I-----~ 278 (439)
.|...|.+.+- +|++|+++++...-+.--..|+|-. -+.+.|.||.|.. ..|+|.-.- ..+||.| +
T Consensus 135 gpvtqiyiggk~prvmrnl~id~itv~~anyailrqgfhnq-~dgaritn~rfs~lqgdaiewnvaindr~ilisdhvie 213 (464)
T PRK10123 135 GPVTQIYIGGKNKRVMRNLTIDNLTVSHANYAILRQGFHNQ-IIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIE 213 (464)
T ss_pred CceeEEEEcCCCchhhhccEEccEEEeeccHHHHhhhhhhc-cccceeeccccccccCceEEEEEEecccceeeehhehe
Confidence 12223333322 3556666666543221122333322 2456666676665 334432111 1244444 5
Q ss_pred eeEecCC---ceEEEeecCC-----CCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCccEE
Q 039959 279 KVTCGPG---HGISIGSLGK-----YTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPII 350 (439)
Q Consensus 279 n~~~~~~---~Gi~igs~g~-----~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i~ 350 (439)
++.|.+| +||.||-.|. |++...|+|.++.|++-.+...-+.+. . + +...++|+...+..
T Consensus 214 ~inctngkinwgigiglagstydn~ype~q~vknfvvanitgs~crqlvhve--n-g-----khfvirnvkaknit---- 281 (464)
T PRK10123 214 RINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVE--N-G-----KHFVIRNIKAKNIT---- 281 (464)
T ss_pred eecccCCcccceeeeeeccccccCCCchhhhhhhEEEEeccCcChhheEEec--C-C-----cEEEEEeeeccccC----
Confidence 5566665 5888876664 344466888888888766654444441 2 1 23444444444431
Q ss_pred EEeeeCCCCCCCCCCCCCc-eeEEeEEEEeEEEEecCCc--------eEEEeecCCCCeecEEEEeEEEecCCC
Q 039959 351 IDQEYCPSNSCKSTSEPSL-VKLSNIHFKNISGTYNTES--------GVTLICSSGVPCENIHLIDINLNPTEP 415 (439)
Q Consensus 351 I~~~y~~~~~~~~~~~~~~-~~i~nI~f~nI~~~~~~~~--------~i~i~~~~~~~~~~I~~~nv~~~~~~~ 415 (439)
.+|+....-.. ++-+ --..|..++||.+..+... .-++.-.......+|+|+|-++.++-.
T Consensus 282 --pdfskkagidn--atvaiygcdnfvidni~mvnsagmligygvikg~ylsipqnfkln~i~ldn~~l~yklr 351 (464)
T PRK10123 282 --PDFSKKAGIDN--ATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFKLNNIQLDNTHLAYKLR 351 (464)
T ss_pred --CCchhhcCCCc--ceEEEEcccceEEeccccccccccEEEeeeeeccEecccccceeceEeecccccceeee
Confidence 11111110000 0100 1234778888887663211 112222233456677777776666543
No 28
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=98.35 E-value=7.7e-06 Score=71.74 Aligned_cols=117 Identities=23% Similarity=0.329 Sum_probs=82.6
Q ss_pred ceeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCC-ceEEecC
Q 039959 192 ANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGD-DCVGMIR 270 (439)
Q Consensus 192 ~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gD-D~i~i~~ 270 (439)
..|.+..+..++|++.++.+ ...++.+....++.++++++.... .|+.+..+.+++|++|.|.... .+|.+..
T Consensus 24 ~gi~~~~~~~~~i~n~~i~~-~~~gi~~~~~~~~~i~~~~~~~~~-----~~i~~~~~~~~~i~~~~i~~~~~~gi~~~~ 97 (158)
T PF13229_consen 24 DGIHVSGSSNITIENCTISN-GGYGIYVSGGSNVTISNNTISDNG-----SGIYVSGSSNITIENNRIENNGDYGIYISN 97 (158)
T ss_dssp ECEEE-SSCESEEES-EEES-STTSEEEECCES-EEES-EEES-S-----EEEECCS-CS-EEES-EEECSSS-SCE-TC
T ss_pred eEEEEEcCCCeEEECeEEEC-CCcEEEEecCCCeEEECeEEEEcc-----ceEEEEecCCceecCcEEEcCCCccEEEec
Confidence 45888888889999999999 778899999999999999999743 6899999999999999999854 4888874
Q ss_pred CceeEEEEeeEecCC--ceEEEeecCCCCCCCCEEEEEEEeEEEeCCc-ceEEE
Q 039959 271 GSSNVSVKKVTCGPG--HGISIGSLGKYTDEEDVVGINVRNCTITGTQ-NGVRV 321 (439)
Q Consensus 271 gs~nV~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~-~gi~I 321 (439)
.+++++|++|++... .|+.+... .-.+++|++|++.+.. .|+.+
T Consensus 98 ~~~~~~i~~n~~~~~~~~gi~~~~~-------~~~~~~i~~n~i~~~~~~gi~~ 144 (158)
T PF13229_consen 98 SSSNVTIENNTIHNNGGSGIYLEGG-------SSPNVTIENNTISNNGGNGIYL 144 (158)
T ss_dssp EECS-EEES-EEECCTTSSCEEEEC-------C--S-EEECEEEECESSEEEE-
T ss_pred cCCCEEEEeEEEEeCcceeEEEECC-------CCCeEEEEEEEEEeCcceeEEE
Confidence 267899999999653 57777543 1247889999999875 67766
No 29
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=98.29 E-value=9.1e-06 Score=76.57 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=75.4
Q ss_pred EeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeE
Q 039959 196 FVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNV 275 (439)
Q Consensus 196 ~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV 275 (439)
+.+|+|+.|+++.+.. ...+++|+||.|+|.++.+-+ .+..|+||+|.|++|..- -++=.++|+
T Consensus 133 ~m~s~ni~id~l~~~G----nY~Fq~~kNvei~ns~l~sKD--------AFWn~eNVtVyDS~i~GE----YLgW~SkNl 196 (277)
T PF12541_consen 133 FMNSENIYIDNLVLDG----NYSFQYCKNVEIHNSKLDSKD--------AFWNCENVTVYDSVINGE----YLGWNSKNL 196 (277)
T ss_pred eeeccceEEeceEEeC----CEEeeceeeEEEEccEEeccc--------ccccCCceEEEcceEeee----EEEEEcCCe
Confidence 4566777777776643 246789999999999999753 246799999999999852 233247999
Q ss_pred EEEeeEecCCceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEE
Q 039959 276 SVKKVTCGPGHGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRV 321 (439)
Q Consensus 276 ~I~n~~~~~~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~I 321 (439)
+..||++.+.+|+. .++|++++||+|.++.-++.-
T Consensus 197 tliNC~I~g~QpLC-----------Y~~~L~l~nC~~~~tdlaFEy 231 (277)
T PF12541_consen 197 TLINCTIEGTQPLC-----------YCDNLVLENCTMIDTDLAFEY 231 (277)
T ss_pred EEEEeEEeccCccE-----------eecceEEeCcEeecceeeeee
Confidence 99999998766654 358999999999988766543
No 30
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=98.26 E-value=0.00015 Score=73.65 Aligned_cols=46 Identities=17% Similarity=0.340 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEEcCcEEEEeeEEeeCccC-CCCeEEEEc
Q 039959 82 NHMAFVKAFEAACHHEGKARLVIPRGTFVLGPVTFMGPCN-NTPLIVQIQ 130 (439)
Q Consensus 82 ~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~i~l~g~~~-~s~vtl~l~ 130 (439)
+.++||+|+++| ..|.+|+++.|+|.-..|.+.+.-. ..++||.-+
T Consensus 3 s~~~lq~Ai~~a---~pGD~I~L~~Gty~~~~i~~~~~GT~~~PItl~Ae 49 (425)
T PF14592_consen 3 SVAELQSAIDNA---KPGDTIVLADGTYKDVEIVFKGSGTAAKPITLRAE 49 (425)
T ss_dssp SHHHHHHHHHH-----TT-EEEE-SEEEET-EEEE-S--BTTB-EEEEES
T ss_pred CHHHHHHHHHhC---CCCCEEEECCceeecceEEEEecccCCCCEEEEec
Confidence 489999998765 5679999999999744566643110 234666553
No 31
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=98.18 E-value=0.00019 Score=68.35 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEcCcEEEEe-----eEEeeCccCCCCeEEEEc
Q 039959 83 HMAFVKAFEAACHHEGKARLVIPRGTFVLG-----PVTFMGPCNNTPLIVQIQ 130 (439)
Q Consensus 83 t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~-----~i~l~g~~~~s~vtl~l~ 130 (439)
-+-|++|++.| ..+.+|++-+|+|.-. ||.+ ++.++|+.+
T Consensus 15 ~~Ti~~A~~~a---~~g~~i~l~~GtY~~~~ge~fPi~i-----~~gVtl~G~ 59 (246)
T PF07602_consen 15 FKTITKALQAA---QPGDTIQLAPGTYSEATGETFPIII-----KPGVTLIGN 59 (246)
T ss_pred HHHHHHHHHhC---CCCCEEEECCceeccccCCcccEEe-----cCCeEEeec
Confidence 45688897654 5678999999999643 4666 466777654
No 32
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=98.18 E-value=8.4e-05 Score=70.66 Aligned_cols=113 Identities=20% Similarity=0.215 Sum_probs=92.9
Q ss_pred eeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCc
Q 039959 193 NIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGS 272 (439)
Q Consensus 193 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs 272 (439)
.+.+..+.+++|++.++.+. .+++++..+++++|++.++.... .||.+..+.+.+|+++.|.....+|.+.. +
T Consensus 37 gi~~~~s~~~~I~~n~i~~~-~~GI~~~~s~~~~i~~n~i~~n~-----~Gi~l~~s~~~~I~~N~i~~n~~GI~l~~-s 109 (236)
T PF05048_consen 37 GIYVENSDNNTISNNTISNN-RYGIHLMGSSNNTIENNTISNNG-----YGIYLMGSSNNTISNNTISNNGYGIYLYG-S 109 (236)
T ss_pred EEEEEEcCCeEEEeeEEECC-CeEEEEEccCCCEEEeEEEEccC-----CCEEEEcCCCcEEECCEecCCCceEEEee-C
Confidence 46888899999999999887 78899999999999999998643 79999988877999999998777998876 6
Q ss_pred eeEEEEeeEecC-CceEEEeecCCCCCCCCEEEEEEEeEEEeCC-cceEEE
Q 039959 273 SNVSVKKVTCGP-GHGISIGSLGKYTDEEDVVGINVRNCTITGT-QNGVRV 321 (439)
Q Consensus 273 ~nV~I~n~~~~~-~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~-~~gi~I 321 (439)
.+.+|+++++.. ..||.+... .+.+|+++++.+. ..|+.+
T Consensus 110 ~~~~I~~N~i~~~~~GI~l~~s---------~~n~I~~N~i~~n~~~Gi~~ 151 (236)
T PF05048_consen 110 SNNTISNNTISNNGYGIYLSSS---------SNNTITGNTISNNTDYGIYF 151 (236)
T ss_pred CceEEECcEEeCCCEEEEEEeC---------CCCEEECeEEeCCCccceEE
Confidence 678888888863 357887532 6677888888888 778884
No 33
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=98.13 E-value=9e-05 Score=70.48 Aligned_cols=135 Identities=21% Similarity=0.188 Sum_probs=109.0
Q ss_pred ceeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCC
Q 039959 192 ANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRG 271 (439)
Q Consensus 192 ~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~g 271 (439)
..+.+.++++..|++.++.+.. .++.+..+.+++|++.++... ..||++..+++++|+++.+.....+|.+...
T Consensus 14 ~Gi~l~~~~~~~i~~n~i~~~~-~gi~~~~s~~~~I~~n~i~~~-----~~GI~~~~s~~~~i~~n~i~~n~~Gi~l~~s 87 (236)
T PF05048_consen 14 NGIYLWNSSNNSIENNTISNSR-DGIYVENSDNNTISNNTISNN-----RYGIHLMGSSNNTIENNTISNNGYGIYLMGS 87 (236)
T ss_pred CcEEEEeCCCCEEEcCEEEeCC-CEEEEEEcCCeEEEeeEEECC-----CeEEEEEccCCCEEEeEEEEccCCCEEEEcC
Confidence 3588888999999999997654 567999999999999999974 5799999999999999999998899999884
Q ss_pred ceeEEEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEecc-CccE
Q 039959 272 SSNVSVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINV-SNPI 349 (439)
Q Consensus 272 s~nV~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~-~~~i 349 (439)
+ +.+|+++++... .||.+.. ..+.+|+++++.+...||.+... .+.++++.++.+. ..+|
T Consensus 88 ~-~~~I~~N~i~~n~~GI~l~~---------s~~~~I~~N~i~~~~~GI~l~~s--------~~n~I~~N~i~~n~~~Gi 149 (236)
T PF05048_consen 88 S-NNTISNNTISNNGYGIYLYG---------SSNNTISNNTISNNGYGIYLSSS--------SNNTITGNTISNNTDYGI 149 (236)
T ss_pred C-CcEEECCEecCCCceEEEee---------CCceEEECcEEeCCCEEEEEEeC--------CCCEEECeEEeCCCccce
Confidence 4 559999999653 4787743 24578999999988889988532 4566777777766 6777
Q ss_pred E
Q 039959 350 I 350 (439)
Q Consensus 350 ~ 350 (439)
.
T Consensus 150 ~ 150 (236)
T PF05048_consen 150 Y 150 (236)
T ss_pred E
Confidence 7
No 34
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=98.12 E-value=9.9e-06 Score=75.26 Aligned_cols=94 Identities=21% Similarity=0.326 Sum_probs=61.8
Q ss_pred ceecEEEEeEEEEC-----------CCCCCCCCceeeeCceeEEEEeeEEecC---------CceEEecCCceeEEEEee
Q 039959 221 GCKNIRLYHLNIIA-----------PDESPNTDGIHISQSDVVKIAKSYIGTG---------DDCVGMIRGSSNVSVKKV 280 (439)
Q Consensus 221 ~~~nv~i~n~~i~~-----------~~~~~n~DGI~i~~s~nv~I~n~~i~~g---------DD~i~i~~gs~nV~I~n~ 280 (439)
.++||.|+|++|+. .......|+|.+..++||+|++|.+..+ |..+.++.++.+|+|++|
T Consensus 44 ~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n 123 (200)
T PF00544_consen 44 GASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNN 123 (200)
T ss_dssp SCEEEEEES-EEECEEEECSTEEETTEEECS--SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-
T ss_pred CCCeEEEECCEEEeccccCCcccCCCccccCCCeEEEEecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEch
Confidence 44555555555554 1123567999999999999999999876 455888888999999999
Q ss_pred EecCCc-eEEEeecCCCCCCCCEEEEEEEeEEEeCC
Q 039959 281 TCGPGH-GISIGSLGKYTDEEDVVGINVRNCTITGT 315 (439)
Q Consensus 281 ~~~~~~-Gi~igs~g~~~~~~~v~nI~v~n~~~~~~ 315 (439)
.+...+ +..+|+......... .+|++.++.+.++
T Consensus 124 ~f~~~~k~~l~G~~d~~~~~~~-~~vT~hhN~f~~~ 158 (200)
T PF00544_consen 124 IFDNHNKTMLIGSSDSNSTDRG-LRVTFHHNYFANT 158 (200)
T ss_dssp EEEEEEETCEESSCTTCGGGTT-EEEEEES-EEEEE
T ss_pred hccccccccccCCCCCccccCC-ceEEEEeEEECch
Confidence 997543 455676422211233 8999999998764
No 35
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=98.08 E-value=8.6e-05 Score=76.49 Aligned_cols=174 Identities=14% Similarity=0.156 Sum_probs=101.1
Q ss_pred eEEEeceecEEEEeEEEECCCCCCCCCceeeeCce----eEEEEeeEEec----CCceEEecCCceeEEEEeeEecCC-c
Q 039959 216 HYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSD----VVKIAKSYIGT----GDDCVGMIRGSSNVSVKKVTCGPG-H 286 (439)
Q Consensus 216 ~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~----nv~I~n~~i~~----gDD~i~i~~gs~nV~I~n~~~~~~-~ 286 (439)
++....+++..+++++|..+.. ..+++...+ +..|+|.++-. ..|++.+.. |=+|+||.+... +
T Consensus 322 ~~~~~g~q~~~~~GiTI~~pP~----~Sm~l~g~~~~~~~~~i~nyKqVGaW~~qtDGi~ly~---nS~i~dcF~h~nDD 394 (582)
T PF03718_consen 322 HISANGGQTLTCEGITINDPPF----HSMDLYGNENDKFSMNISNYKQVGAWYFQTDGIELYP---NSTIRDCFIHVNDD 394 (582)
T ss_dssp ECS-SSSEEEEEES-EEE--SS-----SEEEESSSGGGEEEEEEEEEEE---CTT----B--T---T-EEEEEEEEESS-
T ss_pred hhccCCcceEEEEeeEecCCCc----ceEEecCCccccccceeeceeeeeeEEeccCCccccC---CCeeeeeEEEecCc
Confidence 3445678899999999998763 357776544 47888888654 578998876 557899998754 4
Q ss_pred eEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccC---------ccEEEEe-eeC
Q 039959 287 GISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVS---------NPIIIDQ-EYC 356 (439)
Q Consensus 287 Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~---------~~i~I~~-~y~ 356 (439)
+|.+- ..++.++|+++....+|--|...+ ....+++|.|+|+.+-... .+|.-.. .|.
T Consensus 395 ~iKlY----------hS~v~v~~~ViWk~~Ngpiiq~GW--~pr~isnv~veni~IIh~r~~~~~~~~n~~I~~ss~~y~ 462 (582)
T PF03718_consen 395 AIKLY----------HSNVSVSNTVIWKNENGPIIQWGW--TPRNISNVSVENIDIIHNRWIWHNNYVNTAILGSSPFYD 462 (582)
T ss_dssp SEE------------STTEEEEEEEEEE-SSS-SEE--C--S---EEEEEEEEEEEEE---SSGGCTTT-ECEEE--BTT
T ss_pred hhhee----------ecCcceeeeEEEecCCCCeEEeec--cccccCceEEeeeEEEeeeeecccCCCCceeEecccccc
Confidence 57663 267899999999988775554322 2467999999999985442 2343332 332
Q ss_pred CCCCCCCCCCCCceeEEeEEEEeEEEEecCCceEEEeecCCCCeecEEEEeEEEec
Q 039959 357 PSNSCKSTSEPSLVKLSNIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNP 412 (439)
Q Consensus 357 ~~~~~~~~~~~~~~~i~nI~f~nI~~~~~~~~~i~i~~~~~~~~~~I~~~nv~~~~ 412 (439)
+...... ....-+|++++|+||++++.....++|. +-..-+|+.++|+.+..
T Consensus 463 ~~~s~~~--adp~~ti~~~~~~nv~~EG~~~~l~ri~--plqn~~nl~ikN~~~~~ 514 (582)
T PF03718_consen 463 DMASTKT--ADPSTTIRNMTFSNVRCEGMCPCLFRIY--PLQNYDNLVIKNVHFES 514 (582)
T ss_dssp S-SSS----BEEEEEEEEEEEEEEEEECCE-ECEEE----SEEEEEEEEEEEEECE
T ss_pred cccCCCC--CCcccceeeEEEEeEEEecccceeEEEe--ecCCCcceEEEEeeccc
Confidence 2111110 1123489999999999998766566664 33346788899999873
No 36
>PLN02480 Probable pectinesterase
Probab=98.08 E-value=0.00095 Score=66.73 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=80.7
Q ss_pred eeccEEEEeeEEecCC---------CeeEEE-eceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEE
Q 039959 198 EVSNAIVRGITSVNSK---------GFHYFI-TGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVG 267 (439)
Q Consensus 198 ~~~nv~I~~v~i~ns~---------~~~i~~-~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~ 267 (439)
..++++++||+|+|.- ...+.+ ...+.+.+.||++..-. |-+... ...-.++||+|...=|-|
T Consensus 130 ~a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~Q-----DTLy~~-~gR~yf~~C~IeG~VDFI- 202 (343)
T PLN02480 130 EAPHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTH-----NTLFDY-KGRHYYHSCYIQGSIDFI- 202 (343)
T ss_pred ECCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEeccc-----ceeEeC-CCCEEEEeCEEEeeeeEE-
Confidence 4678899999999872 123333 45788999999998644 444322 345778889988755543
Q ss_pred ecCCceeEEEEeeEecCC-------ce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEe
Q 039959 268 MIRGSSNVSVKKVTCGPG-------HG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTD 339 (439)
Q Consensus 268 i~~gs~nV~I~n~~~~~~-------~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~n 339 (439)
-|.-...++||++..- .| |.--+. ....-....|.||++.+.. .+.+. + ..+.-..+.|.|
T Consensus 203 --FG~g~a~fe~C~i~s~~~~~~~~~G~ITA~~r----~~~~~~GfvF~~C~i~g~g-~~yLG-R---PW~~ya~vVf~~ 271 (343)
T PLN02480 203 --FGRGRSIFHNCEIFVIADRRVKIYGSITAHNR----ESEDNSGFVFIKGKVYGIG-EVYLG-R---AKGAYSRVIFAK 271 (343)
T ss_pred --ccceeEEEEccEEEEecCCCCCCceEEEcCCC----CCCCCCEEEEECCEEcccC-ceeee-c---CCCCcceEEEEe
Confidence 2345788889887521 23 322221 1123356789999998743 23342 1 124457788888
Q ss_pred EEEecc
Q 039959 340 IVMINV 345 (439)
Q Consensus 340 i~~~~~ 345 (439)
..|.+.
T Consensus 272 t~l~~~ 277 (343)
T PLN02480 272 TYLSKT 277 (343)
T ss_pred cccCCe
Confidence 888764
No 37
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=98.07 E-value=0.00031 Score=67.49 Aligned_cols=176 Identities=19% Similarity=0.234 Sum_probs=119.9
Q ss_pred EEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEecce---EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccE
Q 039959 126 IVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVTGSG---TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNA 202 (439)
Q Consensus 126 tl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~G~G---tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv 202 (439)
.+.+.|+|.++. + . ...+.+..+.|.+|.|.| ++-| ..|.+....||
T Consensus 78 ii~v~Gti~~s~-p----s--~~k~~iki~sNkTivG~g~~a~~~g-----------------------~gl~i~~a~NV 127 (345)
T COG3866 78 IIVVKGTITAST-P----S--DKKITIKIGSNKTIVGSGADATLVG-----------------------GGLKIRDAGNV 127 (345)
T ss_pred EEEEcceEeccC-C----C--CceEEEeeccccEEEeeccccEEEe-----------------------ceEEEEeCCcE
Confidence 555667766542 1 1 123677788999998864 2222 34777778999
Q ss_pred EEEeeEEecCC-----CeeEEE-eceecEEEEeEEEECCCC---CCCCCc-eeee-CceeEEEEeeEEecCCceEEecCC
Q 039959 203 IVRGITSVNSK-----GFHYFI-TGCKNIRLYHLNIIAPDE---SPNTDG-IHIS-QSDVVKIAKSYIGTGDDCVGMIRG 271 (439)
Q Consensus 203 ~I~~v~i~ns~-----~~~i~~-~~~~nv~i~n~~i~~~~~---~~n~DG-I~i~-~s~nv~I~n~~i~~gDD~i~i~~g 271 (439)
.|+||+|.... ...|.+ ....|+-|+++++..... ..-.|| +++. .+..|+|+++++...|-..-+++.
T Consensus 128 IirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h~DGl~Dik~~AnyITiS~n~fhdh~Kssl~G~s 207 (345)
T COG3866 128 IIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSHGDGLVDIKKDANYITISYNKFHDHDKSSLLGSS 207 (345)
T ss_pred EEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccCCCccEEeccCCcEEEEEeeeeecCCeeeeeccC
Confidence 99999998766 456777 789999999999997432 123455 3443 478999999999998877777653
Q ss_pred --------ceeEEEEeeEecCC--c--eEEEeecCCCCCCCCEEEEEEEeEEEeCCc-ceEEEEecCCCCCcceeeEEEE
Q 039959 272 --------SSNVSVKKVTCGPG--H--GISIGSLGKYTDEEDVVGINVRNCTITGTQ-NGVRVKTWPGAPASHASNFMFT 338 (439)
Q Consensus 272 --------s~nV~I~n~~~~~~--~--Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~-~gi~Iks~~g~~~g~v~nI~f~ 338 (439)
-.+|++.+|.|.+. + -+++|. +++-|+.+.+.. .|+.+.. |.-..|+.|
T Consensus 208 D~~~~~~~~~kvT~hhNyFkn~~qR~PriRfG~------------vHvyNNYy~~~~~~g~a~~i------G~~AkiyvE 269 (345)
T COG3866 208 DSSNYDDGKYKVTIHHNYFKNLYQRGPRIRFGM------------VHVYNNYYEGNPKFGVAITI------GTSAKIYVE 269 (345)
T ss_pred CcccccCCceeEEEeccccccccccCCceEeeE------------EEEeccccccCcccceEEee------ccceEEEEe
Confidence 25699999999763 2 377764 567777777543 3444421 223457778
Q ss_pred eEEEeccCccE
Q 039959 339 DIVMINVSNPI 349 (439)
Q Consensus 339 ni~~~~~~~~i 349 (439)
+..+++.+.++
T Consensus 270 ~NyF~~~~~~~ 280 (345)
T COG3866 270 NNYFENGSEGL 280 (345)
T ss_pred cceeccCCCCc
Confidence 88887777664
No 38
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=97.94 E-value=0.0049 Score=62.97 Aligned_cols=141 Identities=13% Similarity=0.197 Sum_probs=78.6
Q ss_pred eEEeeeccEEEEeeEEecCCCe--------eE-EEeceecEEEEeEEEECCCCCCCCCceeee-----------CceeEE
Q 039959 194 IQFVEVSNAIVRGITSVNSKGF--------HY-FITGCKNIRLYHLNIIAPDESPNTDGIHIS-----------QSDVVK 253 (439)
Q Consensus 194 i~~~~~~nv~I~~v~i~ns~~~--------~i-~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-----------~s~nv~ 253 (439)
-.....++++.+||+|+|+-.. .+ .....+.+.+.+|+|....| -+... ....-.
T Consensus 200 Tv~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDra~fy~C~flG~QD-----TLy~~~~~~~~~~~~~~~gRqY 274 (422)
T PRK10531 200 VFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKVQIENVNILGRQD-----TFFVTNSGVQNRLETDRQPRTY 274 (422)
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCcEEEEeeEEecccc-----eeeeccccccccccccccccEE
Confidence 3345678899999999987421 12 22346788888888886543 33321 223577
Q ss_pred EEeeEEecCCceEEecCCceeEEEEeeEecC------Cce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcce-EEEE-ec
Q 039959 254 IAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP------GHG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNG-VRVK-TW 324 (439)
Q Consensus 254 I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~------~~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~g-i~Ik-s~ 324 (439)
+++|+|...=|-| + |.-...++||++.. ..| |.-.+. ....-...+|.||++.....+ +.+. .|
T Consensus 275 f~~CyIeG~VDFI-F--G~g~AvFenC~I~s~~~~~~~~g~ITA~~t----~~~~~~GfvF~nCrit~~g~~~~yLGRpW 347 (422)
T PRK10531 275 VKNSYIEGDVDFV-F--GRGAVVFDNTEFRVVNSRTQQEAYVFAPAT----LPNIYYGFLAINSRFNASGDGVAQLGRAW 347 (422)
T ss_pred EEeCEEeecccEE-c--cCceEEEEcCEEEEecCCCCCceEEEecCC----CCCCCCEEEEECCEEecCCCCCeeccCCC
Confidence 8888888755544 2 33467788887642 113 111111 123345677888888874322 2332 22
Q ss_pred CCC-C-------CcceeeEEEEeEEEeccC
Q 039959 325 PGA-P-------ASHASNFMFTDIVMINVS 346 (439)
Q Consensus 325 ~g~-~-------~g~v~nI~f~ni~~~~~~ 346 (439)
... + ......+.|.+..|.+.=
T Consensus 348 ~~~s~~~~y~~~~~~~arvV~~~s~i~~~I 377 (422)
T PRK10531 348 DVDAGLSAYVNGANTNGQVVIRDSAINEGF 377 (422)
T ss_pred cccccccccccccCCcceEEEEeCccccee
Confidence 210 0 012356888888877653
No 39
>PLN02176 putative pectinesterase
Probab=97.84 E-value=0.013 Score=58.60 Aligned_cols=199 Identities=17% Similarity=0.165 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++.... ..-+|+|.+|+|. ..+.+.-. |++++|+.+|. + ...|.+.+..
T Consensus 51 f~TIq~AIdavP~~~~~~~~I~Ik~GvY~-EkV~Ip~~--k~~vtl~G~g~-----~--------~TiIt~~~~~----- 109 (340)
T PLN02176 51 FKTVQSAIDSIPLQNQNWIRILIQNGIYR-EKVTIPKE--KGYIYMQGKGI-----E--------KTIIAYGDHQ----- 109 (340)
T ss_pred ccCHHHHHhhchhcCCceEEEEECCcEEE-EEEEECCC--CccEEEEEcCC-----C--------ceEEEEeCCc-----
Confidence 567999987654322 2347899999996 33444211 56788877641 0 1111111000
Q ss_pred cceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----------eeE-EEeceecEEEEeE
Q 039959 162 GSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----------FHY-FITGCKNIRLYHL 230 (439)
Q Consensus 162 G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----------~~i-~~~~~~nv~i~n~ 230 (439)
++ .....+.. ..+++..+||+|+|.-. ..+ .....+...+.+|
T Consensus 110 --~t-----------------------~~saT~~v-~a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C 163 (340)
T PLN02176 110 --AT-----------------------DTSATFTS-YASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDS 163 (340)
T ss_pred --cc-----------------------ccceEEEE-ECCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEcc
Confidence 00 00111222 46788888888888531 112 2234678889999
Q ss_pred EEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC---------Cce-EEEeecCCCCCCC
Q 039959 231 NIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP---------GHG-ISIGSLGKYTDEE 300 (439)
Q Consensus 231 ~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~---------~~G-i~igs~g~~~~~~ 300 (439)
++..-. |-+... ...-..++|.|...=|-| + |.-...++||++.. ..| |.--+ +. ...
T Consensus 164 ~f~G~Q-----DTLy~~-~gRqyf~~CyIeG~VDFI-F--G~a~a~Fe~C~I~s~~~~~~~~~~~g~ITA~~--r~-~~~ 231 (340)
T PLN02176 164 SFDGFQ-----DTLFDG-KGRHYYKRCVISGGIDFI-F--GYAQSIFEGCTLKLTLGIYPPNEPYGTITAQG--RP-SPS 231 (340)
T ss_pred EEeccc-----ceeEeC-CcCEEEEecEEEecccEE-e--cCceEEEeccEEEEecccCCCCCCcEEEEeCC--CC-CCC
Confidence 998643 444333 346788899998866654 2 33468888888742 123 22211 10 112
Q ss_pred CEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 301 DVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 301 ~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
.-....|.||++.+.. -+.+. + ....-..+.|.|..|.+.
T Consensus 232 ~~~GfvF~~C~itg~g-~~yLG-R---PW~~yarvVf~~t~m~~~ 271 (340)
T PLN02176 232 DKGGFVFKDCTVTGVG-KALLG-R---AWGSYARVIFYRSRFSDV 271 (340)
T ss_pred CCcEEEEECCEEccCc-ceeee-c---CCCCCceEEEEecCcCCe
Confidence 3357889999998743 23332 1 123456788888888764
No 40
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=97.80 E-value=0.0018 Score=60.31 Aligned_cols=123 Identities=23% Similarity=0.312 Sum_probs=82.6
Q ss_pred EEEEeeEEecCC------CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeE
Q 039959 202 AIVRGITSVNSK------GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNV 275 (439)
Q Consensus 202 v~I~~v~i~ns~------~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV 275 (439)
+.|+++++.... ...+++..++++.|+|+++.+. +.+|+.+..+....+.+..... ++.+..++.++
T Consensus 94 ~~i~nl~i~~~~~~~~~~~~~i~~~~~~~~~i~nv~~~~~----~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 166 (225)
T PF12708_consen 94 IQIRNLTIDGNGIDPNNNNNGIRFNSSQNVSISNVRIENS----GGDGIYFNTGTDYRIIGSTHVS---GIFIDNGSNNV 166 (225)
T ss_dssp EEEEEEEEEETCGCE-SCEEEEEETTEEEEEEEEEEEES-----SS-SEEEECCEECEEECCEEEE---EEEEESCEEEE
T ss_pred EEEEeeEEEcccccCCCCceEEEEEeCCeEEEEeEEEEcc----CccEEEEEccccCcEeecccce---eeeeccceeEE
Confidence 347777776433 2468888899999999999873 3478887755554444433221 23333345678
Q ss_pred EEEeeEecCC-ceEEEeecCCCCCCCCEEEEEEEeEEEeC-CcceEEEEecCCCCCcceeeEEEEeEEEeccCccE
Q 039959 276 SVKKVTCGPG-HGISIGSLGKYTDEEDVVGINVRNCTITG-TQNGVRVKTWPGAPASHASNFMFTDIVMINVSNPI 349 (439)
Q Consensus 276 ~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nI~v~n~~~~~-~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~i 349 (439)
.+.++.+..+ .|+..++ ++++++||++.+ ...|+.+... .++.++|++++++..+|
T Consensus 167 ~~~~~~~~~~~~g~~~~~----------~~~~i~n~~~~~~~~~gi~i~~~--------~~~~i~n~~i~~~~~g~ 224 (225)
T PF12708_consen 167 IVNNCIFNGGDNGIILGN----------NNITISNNTFEGNCGNGINIEGG--------SNIIISNNTIENCDDGI 224 (225)
T ss_dssp EEECEEEESSSCSEECEE----------EEEEEECEEEESSSSESEEEEEC--------SEEEEEEEEEESSSEEE
T ss_pred EECCccccCCCceeEeec----------ceEEEEeEEECCccceeEEEECC--------eEEEEEeEEEECCccCc
Confidence 8888887654 3543332 799999999998 6788888542 23889999999988765
No 41
>smart00656 Amb_all Amb_all domain.
Probab=97.79 E-value=0.0024 Score=58.83 Aligned_cols=135 Identities=19% Similarity=0.185 Sum_probs=93.4
Q ss_pred eeEEeeeccEEEEeeEEecCCC------eeEEEeceecEEEEeEEEECCC----CCCCCCce-eee-CceeEEEEeeEEe
Q 039959 193 NIQFVEVSNAIVRGITSVNSKG------FHYFITGCKNIRLYHLNIIAPD----ESPNTDGI-HIS-QSDVVKIAKSYIG 260 (439)
Q Consensus 193 ~i~~~~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~n~~i~~~~----~~~n~DGI-~i~-~s~nv~I~n~~i~ 260 (439)
.|.+..++||.|+++++++... .+|.+..+++|.|++|++.... .....||. ++. .+++|+|++|.|.
T Consensus 33 gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~ 112 (190)
T smart00656 33 GLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFH 112 (190)
T ss_pred EEEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECceEe
Confidence 4777789999999999998543 5899999999999999999741 01124564 443 4799999999998
Q ss_pred cCCceEEecCCce-------eEEEEeeEecCCce--EEEeecCCCCCCCCEEEEEEEeEEEeCCc-ceEEEEecCCCCCc
Q 039959 261 TGDDCVGMIRGSS-------NVSVKKVTCGPGHG--ISIGSLGKYTDEEDVVGINVRNCTITGTQ-NGVRVKTWPGAPAS 330 (439)
Q Consensus 261 ~gDD~i~i~~gs~-------nV~I~n~~~~~~~G--i~igs~g~~~~~~~v~nI~v~n~~~~~~~-~gi~Iks~~g~~~g 330 (439)
..+-+.-++++.+ +|++.++.+.+..+ =++. .+ .+++-|+.+.+.. .++.. ..+
T Consensus 113 ~h~~~~liG~~d~~~~~~~~~vT~h~N~~~~~~~R~P~~r-------~g---~~hv~NN~~~n~~~~~~~~--~~~---- 176 (190)
T smart00656 113 NHWKVMLLGHSDSDTDDGKMRVTIAHNYFGNLRQRAPRVR-------FG---YVHVYNNYYTGWTSYAIGG--RMG---- 176 (190)
T ss_pred cCCEEEEEccCCCccccccceEEEECcEEcCcccCCCccc-------CC---EEEEEeeEEeCcccEeEec--CCC----
Confidence 8777777776532 69999999875422 1121 11 5888999988865 34333 221
Q ss_pred ceeeEEEEeEEEecc
Q 039959 331 HASNFMFTDIVMINV 345 (439)
Q Consensus 331 ~v~nI~f~ni~~~~~ 345 (439)
..|..|+..++++
T Consensus 177 --~~v~~E~N~F~~~ 189 (190)
T smart00656 177 --ATILSEGNYFEAP 189 (190)
T ss_pred --cEEEEECeEEECC
Confidence 2466666665543
No 42
>PLN02634 probable pectinesterase
Probab=97.76 E-value=0.019 Score=57.63 Aligned_cols=131 Identities=17% Similarity=0.202 Sum_probs=78.2
Q ss_pred eeccEEEEeeEEecCCC---------eeE-EEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEE
Q 039959 198 EVSNAIVRGITSVNSKG---------FHY-FITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVG 267 (439)
Q Consensus 198 ~~~nv~I~~v~i~ns~~---------~~i-~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~ 267 (439)
..+++..+||+|+|.-. ..+ .....+...+.+|.+..-. |-+... ...-..+||+|...=|-|
T Consensus 147 ~a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~Q-----DTL~~~-~gR~yf~~CyIeG~VDFI- 219 (359)
T PLN02634 147 YANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGAQ-----DTLCDD-AGRHYFKECYIEGSIDFI- 219 (359)
T ss_pred ECCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEeccc-----ceeeeC-CCCEEEEeeEEcccccEE-
Confidence 45788888888888631 112 2234678889999988644 444332 346778888888765544
Q ss_pred ecCCceeEEEEeeEecC---Cce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEe
Q 039959 268 MIRGSSNVSVKKVTCGP---GHG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMI 343 (439)
Q Consensus 268 i~~gs~nV~I~n~~~~~---~~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~ 343 (439)
+ |.-...++||++.. ..| |.-- ++. ....-....|.||++.+.. -+.+. -..+.-..+.|.+..|.
T Consensus 220 F--G~g~a~Fe~C~I~s~~~~~g~ITA~--~R~-~~~~~~GfvF~~C~vtg~g-~~yLG----RPW~~yarvVf~~t~l~ 289 (359)
T PLN02634 220 F--GNGRSMYKDCELHSIASRFGSIAAH--GRT-CPEEKTGFAFVGCRVTGTG-PLYVG----RAMGQYSRIVYAYTYFD 289 (359)
T ss_pred c--CCceEEEeccEEEEecCCCcEEEeC--CCC-CCCCCcEEEEEcCEEcCCc-ceEec----CCCCCcceEEEEecccC
Confidence 2 33467888888753 123 2221 111 1223357889999998753 23332 11244567888888887
Q ss_pred cc
Q 039959 344 NV 345 (439)
Q Consensus 344 ~~ 345 (439)
+.
T Consensus 290 ~~ 291 (359)
T PLN02634 290 AV 291 (359)
T ss_pred CE
Confidence 64
No 43
>PLN02682 pectinesterase family protein
Probab=97.74 E-value=0.011 Score=59.51 Aligned_cols=212 Identities=14% Similarity=0.149 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++.... ...+|+|.+|+|. ..+.+.-. |++++|+.+|. + ...|.+....
T Consensus 82 f~TIQ~AIdavP~~~~~r~vI~Ik~G~Y~-EkV~Ip~~--k~~Itl~G~g~-----~--------~TiIt~~~~a----- 140 (369)
T PLN02682 82 FTTIQAAIDSLPVINLVRVVIKVNAGTYR-EKVNIPPL--KAYITLEGAGA-----D--------KTIIQWGDTA----- 140 (369)
T ss_pred ccCHHHHHhhccccCCceEEEEEeCceee-EEEEEecc--CceEEEEecCC-----C--------ccEEEecccc-----
Confidence 466999987654322 2367999999996 33444211 56788877642 0 1111111100
Q ss_pred cceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC---------eeEEE-eceecEEEEeEE
Q 039959 162 GSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG---------FHYFI-TGCKNIRLYHLN 231 (439)
Q Consensus 162 G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~---------~~i~~-~~~~nv~i~n~~ 231 (439)
++....|..+- .... .-.....+++..+|++|+|+-. ..+.+ ...+...+.||+
T Consensus 141 --~~~~~~g~~~g-------------T~~S-AT~~v~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~ 204 (369)
T PLN02682 141 --DTPGPGGRPLG-------------TYGS-ATFAVNSPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCK 204 (369)
T ss_pred --CccCCCCCccc-------------cccc-eEEEEECCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcce
Confidence 00001111110 0111 2233456789999999998631 12222 347888899999
Q ss_pred EECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC---Cce-EEEeecCCCCCCCCEEEEEE
Q 039959 232 IIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP---GHG-ISIGSLGKYTDEEDVVGINV 307 (439)
Q Consensus 232 i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~---~~G-i~igs~g~~~~~~~v~nI~v 307 (439)
+.... |-+... ...-..+||+|...=|-| + |.-...+++|++.. ..| |.--+ +. ....-....|
T Consensus 205 f~G~Q-----DTLy~~-~gRqyf~~C~IeG~VDFI-F--G~g~a~Fe~C~I~s~~~~~G~ITA~~--r~-~~~~~~GfvF 272 (369)
T PLN02682 205 FLGAQ-----DTLYDH-LGRHYFKDCYIEGSVDFI-F--GNGLSLYEGCHLHAIARNFGALTAQK--RQ-SVLEDTGFSF 272 (369)
T ss_pred Eeccc-----cceEEC-CCCEEEEeeEEcccccEE-e--cCceEEEEccEEEEecCCCeEEecCC--CC-CCCCCceEEE
Confidence 98754 344332 345788899998765544 2 34578888888742 223 22211 10 1123357889
Q ss_pred EeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 308 RNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 308 ~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
.||++.+.. -+.+. + ....-..+.|.|..|.+.=.|
T Consensus 273 ~~C~itg~g-~~yLG-R---pW~~yarvVf~~t~m~~~I~p 308 (369)
T PLN02682 273 VNCKVTGSG-ALYLG-R---AWGTFSRVVFAYTYMDNIIIP 308 (369)
T ss_pred EeeEecCCC-ceEee-c---CCCCcceEEEEeccCCCcCcC
Confidence 999998753 33342 1 123456788888888775444
No 44
>PLN02665 pectinesterase family protein
Probab=97.73 E-value=0.02 Score=57.73 Aligned_cols=206 Identities=17% Similarity=0.177 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
-..||+||+++.... ...+|+|.+|+|. ..+.+.- +|++++|+.++. + ...|.+.+
T Consensus 80 f~TIq~AIdaiP~~~~~r~vI~Ik~GvY~-EkV~Ip~--~kp~Itl~G~~~-----~--------~tiIt~~~------- 136 (366)
T PLN02665 80 FKTITDAIKSIPAGNTQRVIIDIGPGEYN-EKITIDR--SKPFVTLYGSPG-----A--------MPTLTFDG------- 136 (366)
T ss_pred ccCHHHHHhhCcccCCceEEEEEeCcEEE-EEEEecC--CCCEEEEEecCC-----C--------CCEEEECC-------
Confidence 567999987654322 2357889999996 3444421 156677766531 0 11111111
Q ss_pred cceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC---------eeEE-EeceecEEEEeEE
Q 039959 162 GSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG---------FHYF-ITGCKNIRLYHLN 231 (439)
Q Consensus 162 G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~---------~~i~-~~~~~nv~i~n~~ 231 (439)
+ ... + ... ...-.....+++..+||+|+|.-. ..+. ....+...+.||+
T Consensus 137 ---~----a~~-~------------gT~-~SaTv~v~a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~gDka~f~~C~ 195 (366)
T PLN02665 137 ---T----AAK-Y------------GTV-YSATLIVESDYFMAANIIIKNSAPRPDGKRKGAQAVAMRISGDKAAFYNCR 195 (366)
T ss_pred ---c----cCC-C------------CCc-ceEEEEEECCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEcCCcEEEEcce
Confidence 0 000 0 001 112334567889999999998531 1122 2346888999999
Q ss_pred EECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-C---ce-EEEeecCCCCCCCCEEEEE
Q 039959 232 IIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-G---HG-ISIGSLGKYTDEEDVVGIN 306 (439)
Q Consensus 232 i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-~---~G-i~igs~g~~~~~~~v~nI~ 306 (439)
+..-. |-+... ...-..+||+|...=|-| + |.-...+++|++.. . .| |.--+ +. ....-....
T Consensus 196 f~G~Q-----DTL~~~-~gr~yf~~CyIeG~VDFI-F--G~g~a~fe~C~i~s~~~~~~g~ITA~~--r~-~~~~~~Gfv 263 (366)
T PLN02665 196 FIGFQ-----DTLCDD-KGRHFFKDCYIEGTVDFI-F--GSGKSLYLNTELHVVGDGGLRVITAQA--RN-SEAEDSGFS 263 (366)
T ss_pred ecccc-----ceeEeC-CCCEEEEeeEEeecccee-c--cccceeeEccEEEEecCCCcEEEEcCC--CC-CCCCCceEE
Confidence 98644 444333 245778899998866654 2 33467888888752 1 12 22211 10 112335678
Q ss_pred EEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 307 VRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 307 v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
|.||++.+....+.+.= ..+.-..+.|.|..|.+.=.|
T Consensus 264 F~~C~itg~~~~~yLGR----pW~~ysrvVf~~t~m~~~I~p 301 (366)
T PLN02665 264 FVHCKVTGTGTGAYLGR----AWMSRPRVVFAYTEMSSVVNP 301 (366)
T ss_pred EEeeEEecCCCceeecC----CCCCcceEEEEccccCCeEcc
Confidence 99999988643344431 123356788888888865333
No 45
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=97.72 E-value=0.011 Score=57.99 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=83.2
Q ss_pred ceeEEEeeeeceEEecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCeeEEEeceecEE
Q 039959 147 EEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIR 226 (439)
Q Consensus 147 ~~~I~~~~~~nV~I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~ 226 (439)
...+... ..+++|+| -++.+.|.....+. ...+.-...+.-.|++-.+... .+++.+..+.++.
T Consensus 69 G~~vtv~-aP~~~v~G-l~vr~sg~~lp~m~-------------agI~v~~~at~A~Vr~N~l~~n-~~Gi~l~~s~d~~ 132 (408)
T COG3420 69 GSYVTVA-APDVIVEG-LTVRGSGRSLPAMD-------------AGIFVGRTATGAVVRHNDLIGN-SFGIYLHGSADVR 132 (408)
T ss_pred ccEEEEe-CCCceeee-EEEecCCCCccccc-------------ceEEeccCcccceEEccccccc-ceEEEEeccCceE
Confidence 3444444 47788887 46666665432211 1122233445556665555443 5789999999999
Q ss_pred EEeEEEECCCC---CCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEec
Q 039959 227 LYHLNIIAPDE---SPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCG 283 (439)
Q Consensus 227 i~n~~i~~~~~---~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~ 283 (439)
|++.+|..-.+ ....+||++.++.+..|....|.-+.|||-... +++-.|+++.+.
T Consensus 133 i~~n~i~G~~~~r~~~rGnGI~vyNa~~a~V~~ndisy~rDgIy~~~-S~~~~~~gnr~~ 191 (408)
T COG3420 133 IEGNTIQGLADLRVAERGNGIYVYNAPGALVVGNDISYGRDGIYSDT-SQHNVFKGNRFR 191 (408)
T ss_pred EEeeEEeeccccchhhccCceEEEcCCCcEEEcCccccccceEEEcc-cccceecccchh
Confidence 99999997544 346789999999999999999999999998877 666666666554
No 46
>PLN02773 pectinesterase
Probab=97.58 E-value=0.022 Score=56.51 Aligned_cols=135 Identities=18% Similarity=0.169 Sum_probs=84.1
Q ss_pred EEeeeccEEEEeeEEecCCCe----e-EEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEec
Q 039959 195 QFVEVSNAIVRGITSVNSKGF----H-YFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMI 269 (439)
Q Consensus 195 ~~~~~~nv~I~~v~i~ns~~~----~-i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~ 269 (439)
.+...+++..+||+|+|.... . -.....+.+.+.||++.... |-+.... ..-.++||+|...=|-| ++
T Consensus 97 v~v~a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~Q-----DTL~~~~-gr~yf~~c~IeG~VDFI-FG 169 (317)
T PLN02773 97 VIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQ-----DTLYLHY-GKQYLRDCYIEGSVDFI-FG 169 (317)
T ss_pred EEEECCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeeccc-----ceeEeCC-CCEEEEeeEEeecccEE-ee
Confidence 344688999999999987321 1 22234688999999999754 4444332 35788999998866654 23
Q ss_pred CCceeEEEEeeEecC-Cce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcc--eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 270 RGSSNVSVKKVTCGP-GHG-ISIGSLGKYTDEEDVVGINVRNCTITGTQN--GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 270 ~gs~nV~I~n~~~~~-~~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~--gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
.-...+++|++.. ..| |.--+. . ....-....|.||++.+... -+.+. + ..+.-..+.|.|..|.+.
T Consensus 170 --~g~a~Fe~c~i~s~~~g~ITA~~r--~-~~~~~~GfvF~~c~it~~~~~~~~yLG-R---pW~~~a~vVf~~t~l~~~ 240 (317)
T PLN02773 170 --NSTALLEHCHIHCKSAGFITAQSR--K-SSQESTGYVFLRCVITGNGGSGYMYLG-R---PWGPFGRVVFAYTYMDAC 240 (317)
T ss_pred --ccEEEEEeeEEEEccCcEEECCCC--C-CCCCCceEEEEccEEecCCCCcceeec-C---CCCCCceEEEEecccCCe
Confidence 3568999998853 234 222111 0 11223468899999988542 13332 1 123456788888888874
No 47
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=97.36 E-value=0.04 Score=58.08 Aligned_cols=206 Identities=19% Similarity=0.260 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHhh--cCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEE
Q 039959 83 HMAFVKAFEAACH--HEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVV 160 (439)
Q Consensus 83 t~a~~~A~~~a~~--~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I 160 (439)
-.-||+||+++.. ....-+|+|.+|+|. ..+.+.. +|++++|..+|. ....|
T Consensus 237 f~TIq~AI~a~~~~~~~~r~vI~Ik~GvY~-E~V~I~~--~k~nItl~G~g~-----------------------~~TiI 290 (529)
T PLN02170 237 HKTIGEALLSTSLESGGGRTVIYLKAGTYH-ENLNIPT--KQKNVMLVGDGK-----------------------GKTVI 290 (529)
T ss_pred hhhHHHHHHhcccccCCceEEEEEeCCeeE-EEEecCC--CCceEEEEEcCC-----------------------CCeEE
Confidence 5679999875432 223468999999996 3344421 156788877652 11222
Q ss_pred ecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEE-EeceecEEEEeEEEECC
Q 039959 161 TGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYF-ITGCKNIRLYHLNIIAP 235 (439)
Q Consensus 161 ~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~n~~i~~~ 235 (439)
+|... .+.| |.. . ...-.....+++..+|++|+|... ..+. ....+...+.+|++..-
T Consensus 291 t~~~~-~~~g---~~T------------~-~SaTv~v~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~Gy 353 (529)
T PLN02170 291 VGSRS-NRGG---WTT------------Y-QTATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGY 353 (529)
T ss_pred EeCCc-CCCC---Ccc------------c-cceEEEEEcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEecc
Confidence 22100 0001 100 0 112334457788899999998632 1222 23578899999999874
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC----C-ce-EEEeecCCCCCCCCEEEEEEEe
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP----G-HG-ISIGSLGKYTDEEDVVGINVRN 309 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~----~-~G-i~igs~g~~~~~~~v~nI~v~n 309 (439)
. |-+.... ..-..++|+|...=|-| -|.-...++||.+.. + .| |.-- |+. +...-..+.|.|
T Consensus 354 Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avFq~C~I~~~~~~~~~g~ITAq--~R~-~~~~~~Gfvf~~ 421 (529)
T PLN02170 354 Q-----DSLYTHS-KRQFYRETDITGTVDFI---FGNSAVVFQSCNIAARKPSGDRNYVTAQ--GRS-DPNQNTGISIHN 421 (529)
T ss_pred C-----CcceeCC-CCEEEEeeEEcccccee---cccceEEEeccEEEEecCCCCceEEEec--CCC-CCCCCceEEEEe
Confidence 4 4444433 35677999999765544 234578888888742 1 12 2221 111 223346788999
Q ss_pred EEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 310 CTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 310 ~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
|++.+.. -..++ -....-..+.|.+..|.+.=.|
T Consensus 422 C~it~~~-~~yLG----RPW~~ysrvVf~~t~l~~~I~p 455 (529)
T PLN02170 422 CRITAES-MTYLG----RPWKEYSRTVVMQSFIDGSIHP 455 (529)
T ss_pred eEEecCC-ceeee----CCCCCCceEEEEecccCCeecc
Confidence 9998864 23332 1123356788888888765333
No 48
>PLN02304 probable pectinesterase
Probab=97.31 E-value=0.065 Score=54.20 Aligned_cols=203 Identities=18% Similarity=0.227 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHhhc-CCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHH-EGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~-~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++... ....+|+|.+|+|. ..+.+.- +|++++|+.+|. + ...|....... .
T Consensus 87 f~TIQ~AIdavP~~~~~r~vI~Ik~GvY~-EkV~Ip~--~K~~Itl~G~g~-----~--------~TiIt~~~~a~---~ 147 (379)
T PLN02304 87 FTTVQSAVDAVGNFSQKRNVIWINSGIYY-EKVTVPK--TKPNITFQGQGF-----D--------STAIAWNDTAK---S 147 (379)
T ss_pred ccCHHHHHhhCcccCCCcEEEEEeCeEeE-EEEEECC--CCCcEEEEecCC-----C--------CcEEEccCccc---C
Confidence 45699998765432 23457899999996 3444421 157788877642 0 01111110000 0
Q ss_pred cceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC---------eeEE-EeceecEEEEeEE
Q 039959 162 GSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG---------FHYF-ITGCKNIRLYHLN 231 (439)
Q Consensus 162 G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~---------~~i~-~~~~~nv~i~n~~ 231 (439)
+.||+ ...-.....+++..+||+|+|+-. ..+. ....+...+.+|.
T Consensus 148 ~~gT~------------------------~SaTv~v~a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~gDra~fy~C~ 203 (379)
T PLN02304 148 ANGTF------------------------YSASVQVFASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIAGDQAAFWGCG 203 (379)
T ss_pred CCCcc------------------------ceEEEEEECCCeEEEeeEEEecCCCCCCCCCCccEEEEEecCCcEEEEece
Confidence 00110 011222345788888888888631 1222 2346888889999
Q ss_pred EECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCC-----------ce-EEEeecCCCCCC
Q 039959 232 IIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPG-----------HG-ISIGSLGKYTDE 299 (439)
Q Consensus 232 i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~-----------~G-i~igs~g~~~~~ 299 (439)
+..-. |-+... ...-.++||+|...=|-| + |.-...++||.+..- .| |.--+ +. ..
T Consensus 204 f~G~Q-----DTLy~~-~gR~Yf~~CyIeG~VDFI-F--G~g~A~Fe~C~I~s~~~~~~~g~~~~~G~ITA~~--Rt-~~ 271 (379)
T PLN02304 204 FFGAQ-----DTLHDD-RGRHYFKDCYIQGSIDFI-F--GDARSLYENCRLISMANPVPPGSKSINGAVTAHG--RT-SK 271 (379)
T ss_pred Eeccc-----ceeEeC-CCCEEEEeeEEcccccEE-e--ccceEEEEccEEEEecCCcccccccCceEEEecC--CC-CC
Confidence 88654 344332 345778889888765544 2 334678888877421 12 22111 00 12
Q ss_pred CCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 300 EDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 300 ~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
..-....|.||++.+.. -+.+. -....-..+.|.+..|.+.
T Consensus 272 ~~~~GfvF~~C~itg~g-~vyLG----RPW~pysrvVf~~t~m~~~ 312 (379)
T PLN02304 272 DENTGFSFVNCTIGGTG-RIWLG----RAWRPYSRVVFAYTSMTDI 312 (379)
T ss_pred CCCceEEEECCEEccCc-ceeec----CCCCCcceEEEEecccCCE
Confidence 33456778999987742 23332 1123356788888888764
No 49
>PLN02916 pectinesterase family protein
Probab=97.29 E-value=0.057 Score=56.64 Aligned_cols=210 Identities=16% Similarity=0.185 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHhh----cCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeece
Q 039959 83 HMAFVKAFEAACH----HEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGL 158 (439)
Q Consensus 83 t~a~~~A~~~a~~----~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV 158 (439)
-.-||+||+++.. ....-+|+|.+|+|. ..+.+.- +|++++|..+|. ...
T Consensus 199 f~TIq~AI~a~P~~~~~~~~r~vI~Ik~GvY~-E~V~I~~--~k~~i~l~G~g~-----------------------~~T 252 (502)
T PLN02916 199 HRTINQALAALSRMGKSRTNRVIIYVKAGVYN-EKVEIDR--HMKNVMFVGDGM-----------------------DKT 252 (502)
T ss_pred ccCHHHHHHhcccccCCCCceEEEEEeCceee-EEEEecC--CCceEEEEecCC-----------------------CCc
Confidence 4569999876542 122358999999996 3444421 156777777651 111
Q ss_pred EEecceE-EeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEE
Q 039959 159 VVTGSGT-FDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNI 232 (439)
Q Consensus 159 ~I~G~Gt-IDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i 232 (439)
.|++... -||.+ . + -..-.....+++..+|++|+|.-. ..+.+ ...+...+.+|.|
T Consensus 253 iIt~~~~~~~g~~-T-~----------------~SAT~~v~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f 314 (502)
T PLN02916 253 IITNNRNVPDGST-T-Y----------------SSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSF 314 (502)
T ss_pred EEEeCCccCCCCc-c-e----------------eeEEEEEECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeE
Confidence 1221100 01100 0 0 112233446788888999988632 12222 3568889999999
Q ss_pred ECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC------Cce-EEEeecCCCCCCCCEEEE
Q 039959 233 IAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP------GHG-ISIGSLGKYTDEEDVVGI 305 (439)
Q Consensus 233 ~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~------~~G-i~igs~g~~~~~~~v~nI 305 (439)
..-. |-+...+ ..-..++|+|...=|-| -|.-...++||.+.. ..| |.-- ++. +...-..+
T Consensus 315 ~G~Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avFq~C~I~~~~~~~~~~g~ITAq--~r~-~~~~~tGf 382 (502)
T PLN02916 315 KGYQ-----DTLFVHS-LRQFYRDCHIYGTIDFI---FGDAAVVFQNCDIFVRRPMDHQGNMITAQ--GRD-DPHENTGI 382 (502)
T ss_pred eccC-----ceeEeCC-CCEEEEecEEeccccee---ccCceEEEecCEEEEecCCCCCcceEEec--CCC-CCCCCcEE
Confidence 9744 4454443 35678999999865544 344678889998742 123 2221 111 22334688
Q ss_pred EEEeEEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 306 NVRNCTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 306 ~v~n~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
.|.||++....... ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 383 vf~~C~it~~~~~~~~~g~~~~yLGRPW~~ysrvVf~~t~~~~~I~p 429 (502)
T PLN02916 383 SIQHSRVRASPEFEAVKGRFKSFLGRPWKKYSRTVFLKTDLDGLIDP 429 (502)
T ss_pred EEEeeEEecCccccccccccceEeecCCCCCceEEEEecccCCeEcC
Confidence 99999998854211 01222121234457888888888875443
No 50
>PLN02671 pectinesterase
Probab=97.28 E-value=0.069 Score=53.74 Aligned_cols=136 Identities=15% Similarity=0.192 Sum_probs=81.5
Q ss_pred EeeeccEEEEeeEEecCCC--------eeEE-EeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceE
Q 039959 196 FVEVSNAIVRGITSVNSKG--------FHYF-ITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCV 266 (439)
Q Consensus 196 ~~~~~nv~I~~v~i~ns~~--------~~i~-~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i 266 (439)
....+++..+||+|+|... ..+. ....+.+.+.||++..-. |-+... ...-.++||+|...=|-|
T Consensus 150 ~v~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~gDra~f~~c~f~G~Q-----DTLy~~-~gR~yf~~CyIeG~VDFI 223 (359)
T PLN02671 150 TIESDYFCATGITFENTVVAEPGGQGMQAVALRISGDKAFFYKVRVLGAQ-----DTLLDE-TGSHYFYQCYIQGSVDFI 223 (359)
T ss_pred EEECCceEEEeeEEEcCCCCCCCCCCccEEEEEEcCccEEEEcceEeccc-----cccEeC-CCcEEEEecEEEEeccEE
Confidence 3446788888888888721 1122 234688899999998644 344322 235688899998766654
Q ss_pred EecCCceeEEEEeeEecC---Cce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEE
Q 039959 267 GMIRGSSNVSVKKVTCGP---GHG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVM 342 (439)
Q Consensus 267 ~i~~gs~nV~I~n~~~~~---~~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~ 342 (439)
++ .-...++||++.. ..| |.--+. . ....-....|.||++.+.. -+.+. + ..+.-..+.|.|..|
T Consensus 224 -FG--~g~A~Fe~C~I~s~~~~~G~ITA~~r--~-~~~~~~GfvF~~C~itg~g-~vyLG-R---PW~~yarvVf~~t~m 292 (359)
T PLN02671 224 -FG--NAKSLYQDCVIQSTAKRSGAIAAHHR--D-SPTEDTGFSFVNCVINGTG-KIYLG-R---AWGNYSRTVYSNCFI 292 (359)
T ss_pred -ec--ceeEEEeccEEEEecCCCeEEEeecc--C-CCCCCccEEEEccEEccCc-cEEEe-C---CCCCCceEEEEeccc
Confidence 23 3468888888753 224 332211 0 1123356789999998743 34443 1 123346788888888
Q ss_pred eccCcc
Q 039959 343 INVSNP 348 (439)
Q Consensus 343 ~~~~~~ 348 (439)
.+.=.|
T Consensus 293 ~~~I~p 298 (359)
T PLN02671 293 ADIITP 298 (359)
T ss_pred CCeEcC
Confidence 775333
No 51
>PLN02432 putative pectinesterase
Probab=97.27 E-value=0.073 Score=52.21 Aligned_cols=132 Identities=18% Similarity=0.204 Sum_probs=78.4
Q ss_pred eeeccEEEEeeEEecCCC---eeE-EEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCc
Q 039959 197 VEVSNAIVRGITSVNSKG---FHY-FITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGS 272 (439)
Q Consensus 197 ~~~~nv~I~~v~i~ns~~---~~i-~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs 272 (439)
...+++..+||+|+|.-. -.+ .....+...+.+|.+.... |-+... ...-.++||.|...=|-| ++ .
T Consensus 91 v~a~~f~a~nlt~~Nt~g~~~QAvAl~v~gDr~~f~~c~~~G~Q-----DTLy~~-~gr~yf~~c~I~G~VDFI-FG--~ 161 (293)
T PLN02432 91 VLASDFVGRFLTIQNTFGSSGKAVALRVAGDRAAFYGCRILSYQ-----DTLLDD-TGRHYYRNCYIEGATDFI-CG--N 161 (293)
T ss_pred EECCCeEEEeeEEEeCCCCCCceEEEEEcCCcEEEEcceEeccc-----ceeEEC-CCCEEEEeCEEEecccEE-ec--C
Confidence 346788889999988632 112 2234678888888888644 444333 235688888888765654 23 3
Q ss_pred eeEEEEeeEecC---Cce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 273 SNVSVKKVTCGP---GHG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 273 ~nV~I~n~~~~~---~~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...+++|++.. ..| |.--+ +. ....-....|.||++.+.. .+.+. -..+.-..+.|.|..|.+.
T Consensus 162 g~a~Fe~c~i~s~~~~~g~itA~~--r~-~~~~~~Gfvf~~c~itg~g-~~yLG----RpW~~~srvvf~~t~l~~~ 230 (293)
T PLN02432 162 AASLFEKCHLHSLSPNNGAITAQQ--RT-SASENTGFTFLGCKLTGAG-TTYLG----RPWGPYSRVVFALSYMSSV 230 (293)
T ss_pred ceEEEEeeEEEEecCCCCeEEecC--CC-CCCCCceEEEEeeEEcccc-hhhcc----CCCCCccEEEEEecccCCe
Confidence 468888888742 224 32211 10 1122346789999988642 22221 1134456788888888764
No 52
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=97.21 E-value=0.041 Score=58.74 Aligned_cols=150 Identities=15% Similarity=0.085 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhhc--CCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEE
Q 039959 83 HMAFVKAFEAACHH--EGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVV 160 (439)
Q Consensus 83 t~a~~~A~~~a~~~--~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I 160 (439)
=.-||+||+++... .+.-+|+|.+|+|.- .+.+. .+|.+++|..+|. ....|
T Consensus 253 f~TIq~Av~a~p~~~~~~r~vI~vk~GvY~E-~V~i~--~~k~~v~l~G~g~-----------------------~~TiI 306 (553)
T PLN02708 253 YKTVQEAVNAAPDNNGDRKFVIRIKEGVYEE-TVRVP--LEKKNVVFLGDGM-----------------------GKTVI 306 (553)
T ss_pred ccCHHHHHHhhhhccCCccEEEEEeCceEEe-eeeec--CCCccEEEEecCC-----------------------CceEE
Confidence 46699998766542 234689999999963 33332 1156777777652 11222
Q ss_pred ecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCe----eEEE-eceecEEEEeEEEECC
Q 039959 161 TGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGF----HYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 161 ~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~n~~i~~~ 235 (439)
+|.-.....| |.. .+. .-.....+++..+|++|+|...- .+.+ ...+.+.+.||.|..-
T Consensus 307 t~~~~~~~~g---~~T------------~~s-aT~~v~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~ 370 (553)
T PLN02708 307 TGSLNVGQPG---IST------------YNT-ATVGVLGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGN 370 (553)
T ss_pred EecCccCCCC---cCc------------cce-EEEEEEcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeec
Confidence 2210000000 000 011 12223466888888888886421 1222 3456677777777753
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEec
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCG 283 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~ 283 (439)
. |-+...+ ..-..++|+|...=|-| + |.-...++||.+.
T Consensus 371 Q-----DTLy~~~-~rq~y~~C~I~GtVDFI-F--G~a~avfq~c~i~ 409 (553)
T PLN02708 371 Q-----DTLYAHS-LRQFYKSCRIQGNVDFI-F--GNSAAVFQDCAIL 409 (553)
T ss_pred c-----ccceeCC-CceEEEeeEEeecCCEE-e--cCceEEEEccEEE
Confidence 3 3343333 23456777776654433 2 2346666666653
No 53
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=97.12 E-value=0.11 Score=54.82 Aligned_cols=210 Identities=16% Similarity=0.199 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++.... ..-+|+|.+|+|. ..+.+.- ++.+++|+.+|. ....|+
T Consensus 230 f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~-E~V~I~~--~k~~itl~G~g~-----------------------~~TiIt 283 (530)
T PLN02933 230 FTTINEAVSAAPNSSETRFIIYIKGGEYF-ENVELPK--KKTMIMFIGDGI-----------------------GKTVIK 283 (530)
T ss_pred ccCHHHHHHhchhcCCCcEEEEEcCceEE-EEEEecC--CCceEEEEEcCC-----------------------CCcEEE
Confidence 466999987654422 3468999999996 4455531 156777777652 111111
Q ss_pred cceE-EeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GSGT-FDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~Gt-IDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
+... .|| |.. .+. .-.....+++..+|++|+|... ..+.+ ...+...+.+|.+..-
T Consensus 284 ~~~~~~dg-----~~T------------~~S-aT~~v~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~ 345 (530)
T PLN02933 284 ANRSRIDG-----WST------------FQT-ATVGVKGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGY 345 (530)
T ss_pred eCCccCCC-----Ccc------------ccc-eEEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEec
Confidence 1100 011 100 011 1233456788889999988642 12333 3578889999999975
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ce-EEEeecCCCCCCCCEEEEEEE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HG-ISIGSLGKYTDEEDVVGINVR 308 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~G-i~igs~g~~~~~~~v~nI~v~ 308 (439)
. |-+.... ..-..++|+|...=|-| -|.-...++||.+.. + .| |.-- ++ .+...-..+.|.
T Consensus 346 Q-----DTLy~~~-~Rqyy~~C~IeGtVDFI---FG~a~avFq~C~i~~~~~~~~~~~~iTAq--~r-~~~~~~tGfvf~ 413 (530)
T PLN02933 346 Q-----DTLYVHS-AKQFYRECDIYGTIDFI---FGNAAVVFQNCSLYARKPNPNHKIAFTAQ--SR-NQSDQPTGISII 413 (530)
T ss_pred c-----cccccCC-CceEEEeeEEeccccee---ccCceEEEeccEEEEeccCCCCceEEEec--CC-CCCCCCceEEEE
Confidence 4 4444433 34688999999765543 334568888988742 1 12 2221 11 122334578999
Q ss_pred eEEEeCCcceEE----EEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 309 NCTITGTQNGVR----VKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 309 n~~~~~~~~gi~----Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
||++......+. .+.+=|-....-..+.|.+..|.+.=.|
T Consensus 414 ~C~it~~~~~~~~~~~~~~yLGRPW~~ysrvVf~~s~l~~~I~p 457 (530)
T PLN02933 414 SSRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHP 457 (530)
T ss_pred eeEEecCCcccccccccceEeccCCCCCceEEEEecccCCeecc
Confidence 999988542111 1122121234457888888888875443
No 54
>PLN02497 probable pectinesterase
Probab=97.11 E-value=0.2 Score=50.00 Aligned_cols=133 Identities=21% Similarity=0.282 Sum_probs=78.5
Q ss_pred eeeccEEEEeeEEecCCCe-----------eEE-EeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCc
Q 039959 197 VEVSNAIVRGITSVNSKGF-----------HYF-ITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDD 264 (439)
Q Consensus 197 ~~~~nv~I~~v~i~ns~~~-----------~i~-~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD 264 (439)
...+++..+|++|+|.-.+ .+. ....+...+.||.+..-. |-+... ...-..++|+|...=|
T Consensus 112 v~a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~Q-----DTLy~~-~gRqyf~~C~IeG~VD 185 (331)
T PLN02497 112 TLADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQ-----DTLWDS-DGRHYFKRCTIQGAVD 185 (331)
T ss_pred EecCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccc-----cceeeC-CCcEEEEeCEEEeccc
Confidence 3467888888888886321 122 234678888899988754 344322 3457788888887655
Q ss_pred eEEecCCceeEEEEeeEecC-------C-ce-EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeE
Q 039959 265 CVGMIRGSSNVSVKKVTCGP-------G-HG-ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNF 335 (439)
Q Consensus 265 ~i~i~~gs~nV~I~n~~~~~-------~-~G-i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI 335 (439)
-| + |.-...++||++.. + .| |.--+ +. ....-....|.||++.+.. -+.+. ++ ...-..+
T Consensus 186 FI-F--G~g~a~Fe~C~I~s~~~~~~~~~~g~ITA~~--r~-~~~~~~GfvF~~C~itg~g-~~yLG-RP---W~~ysrv 254 (331)
T PLN02497 186 FI-F--GSGQSIYESCVIQVLGGQLEPGLAGFITAQG--RT-NPYDANGFVFKNCLVYGTG-SAYLG-RP---WRGYSRV 254 (331)
T ss_pred EE-c--cCceEEEEccEEEEecCcCCCCCceEEEecC--CC-CCCCCceEEEEccEEccCC-CEEEe-CC---CCCCceE
Confidence 44 2 33467888887742 1 13 22211 10 1233456789999988753 23332 11 2334678
Q ss_pred EEEeEEEeccC
Q 039959 336 MFTDIVMINVS 346 (439)
Q Consensus 336 ~f~ni~~~~~~ 346 (439)
.|.|..|.+.=
T Consensus 255 vf~~t~m~~~I 265 (331)
T PLN02497 255 LFYNSNLTDVV 265 (331)
T ss_pred EEEecccCCeE
Confidence 88888887753
No 55
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=97.11 E-value=0.018 Score=56.74 Aligned_cols=205 Identities=21% Similarity=0.301 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++.... ...+|+|.||+|. ..+.++-. +++++|..++. ...+|+
T Consensus 12 f~TIq~Aida~p~~~~~~~~I~I~~G~Y~-E~V~i~~~--k~~v~l~G~~~-----------------------~~tiI~ 65 (298)
T PF01095_consen 12 FTTIQAAIDAAPDNNTSRYTIFIKPGTYR-EKVTIPRS--KPNVTLIGEGR-----------------------DKTIIT 65 (298)
T ss_dssp BSSHHHHHHHS-SSSSS-EEEEE-SEEEE---EEE-ST--STTEEEEES-T-----------------------TTEEEE
T ss_pred ccCHHHHHHhchhcCCceEEEEEeCeeEc-cccEeccc--cceEEEEecCC-----------------------CceEEE
Confidence 456999987654322 2358999999996 34555411 35677766531 111222
Q ss_pred cce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC------eeEEEeceecEEEEeEEEEC
Q 039959 162 GSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG------FHYFITGCKNIRLYHLNIIA 234 (439)
Q Consensus 162 G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~n~~i~~ 234 (439)
+.. ..++.+ ..+...+. ...+++.+++|+|.|... -.+. ...+.+.+.+|.+..
T Consensus 66 ~~~~~~~~~~-----------------t~~saT~~-v~a~~f~~~nit~~Nt~g~~~~qAvAl~-~~~d~~~f~~c~~~g 126 (298)
T PF01095_consen 66 GNDNAADGGG-----------------TFRSATFS-VNADDFTAENITFENTAGPSGGQAVALR-VSGDRAAFYNCRFLG 126 (298)
T ss_dssp E---TTTB-H-----------------CGGC-SEE-E-STT-EEEEEEEEEHCSGSG----SEE-ET-TSEEEEEEEEE-
T ss_pred Eecccccccc-----------------cccccccc-ccccceeeeeeEEecCCCCcccceeeee-ecCCcEEEEEeEEcc
Confidence 200 000000 00111232 347899999999998532 1233 345788999999987
Q ss_pred CCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ce-EEEeecCCCCCCCCEEEEEE
Q 039959 235 PDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HG-ISIGSLGKYTDEEDVVGINV 307 (439)
Q Consensus 235 ~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~G-i~igs~g~~~~~~~v~nI~v 307 (439)
.. |-+.... ....++||+|...-|-| ++. -...++||++.. + .| |.--+ + .+...-...+|
T Consensus 127 ~Q-----DTL~~~~-~r~y~~~c~IeG~vDFI-fG~--~~a~f~~c~i~~~~~~~~~~~~ItA~~--r-~~~~~~~G~vF 194 (298)
T PF01095_consen 127 YQ-----DTLYANG-GRQYFKNCYIEGNVDFI-FGN--GTAVFENCTIHSRRPGGGQGGYITAQG--R-TSPSQKSGFVF 194 (298)
T ss_dssp ST-----T-EEE-S-SEEEEES-EEEESEEEE-EES--SEEEEES-EEEE--SSTSSTEEEEEE------CTTSS-EEEE
T ss_pred cc-----ceeeecc-ceeEEEeeEEEecCcEE-ECC--eeEEeeeeEEEEeccccccceeEEeCC--c-cccCCCeEEEE
Confidence 44 5565444 46788999999876755 333 367788888742 1 23 32211 1 12234567889
Q ss_pred EeEEEeCCcc--------eEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 308 RNCTITGTQN--------GVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 308 ~n~~~~~~~~--------gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
.||++..... ...+.- + .+.-..+.|.|..|.+.=.|
T Consensus 195 ~~c~i~~~~~~~~~~~~~~~yLGR-p---W~~~s~vvf~~t~m~~~I~p 239 (298)
T PF01095_consen 195 DNCTITGDSGVSPSYSDGSVYLGR-P---WGPYSRVVFINTYMDDHINP 239 (298)
T ss_dssp ES-EEEESTTTCGGCCCSTEEEE------SSEETEEEEES-EE-TTEET
T ss_pred EEeEEecCccccccccceeEEecC-c---ccceeeEEEEccccCCeeec
Confidence 9999998532 233321 1 23446788999999876444
No 56
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=97.09 E-value=0.08 Score=56.97 Aligned_cols=211 Identities=15% Similarity=0.174 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++.... ..-+|+|.+|+|.= .+.+.- ++.+++|+.+|. ....|+
T Consensus 297 f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~--~k~~i~l~G~g~-----------------------~~TiIt 350 (596)
T PLN02745 297 FTTISDALAAMPAKYEGRYVIYVKQGIYDE-TVTVDK--KMVNVTMYGDGS-----------------------QKTIVT 350 (596)
T ss_pred cccHHHHHHhccccCCceEEEEEeCCeeEE-EEEEcC--CCceEEEEecCC-----------------------CceEEE
Confidence 467999987554322 34679999999963 344431 156778877652 111111
Q ss_pred cceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEE-EeceecEEEEeEEEECCC
Q 039959 162 GSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYF-ITGCKNIRLYHLNIIAPD 236 (439)
Q Consensus 162 G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~n~~i~~~~ 236 (439)
|.... ..| |. ..+. .-.....+++..+|++|+|... ..+. ...++...+.+|.|..-.
T Consensus 351 ~~~~~-~~g---~~------------T~~s-aT~~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~Q 413 (596)
T PLN02745 351 GNKNF-ADG---VR------------TFRT-ATFVALGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQ 413 (596)
T ss_pred ECCcc-cCC---Cc------------ceee-EEEEEEcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecc
Confidence 11000 000 00 0011 1223367889999999998532 1222 245789999999999754
Q ss_pred CCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCC------ce-EEEeecCCCCCCCCEEEEEEEe
Q 039959 237 ESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPG------HG-ISIGSLGKYTDEEDVVGINVRN 309 (439)
Q Consensus 237 ~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~------~G-i~igs~g~~~~~~~v~nI~v~n 309 (439)
|-+.... ..-..++|+|...=|-| -|.-...++||.+..- .| |.-- ++ .+...-..+.|.|
T Consensus 414 -----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avf~~C~i~~~~~~~~~~~~iTAq--~r-~~~~~~~Gfvf~~ 481 (596)
T PLN02745 414 -----DTLYAQT-HRQFYRSCVITGTIDFI---FGDAAAIFQNCLIFVRKPLPNQQNTVTAQ--GR-VDKFETTGIVLQN 481 (596)
T ss_pred -----cccccCC-CcEEEEeeEEEeeccEE---ecceeEEEEecEEEEecCCCCCCceEEec--CC-CCCCCCceEEEEe
Confidence 3444333 45788999999865543 3346889999987421 23 2221 11 1223446889999
Q ss_pred EEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 310 CTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 310 ~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
|++....... ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 482 c~i~~~~~~~~~~~~~~~yLGRPW~~ysrvv~~~s~l~~~I~p 524 (596)
T PLN02745 482 CRIAPDEDLKPVKTEVKSYLGRPWKEFSRTIVMESTIEDVIDP 524 (596)
T ss_pred eEEecCccccccccccceeccCCCCCCccEEEEecccCCeEcc
Confidence 9999864211 11222222234457788888888775333
No 57
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=97.08 E-value=0.063 Score=57.08 Aligned_cols=212 Identities=20% Similarity=0.240 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHhh---cCCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceE
Q 039959 83 HMAFVKAFEAACH---HEGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLV 159 (439)
Q Consensus 83 t~a~~~A~~~a~~---~~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~ 159 (439)
-.-||+||+++.. ..+.-+|+|.+|+|.=. +.+.- +|++++|..+|. ....
T Consensus 235 f~TIq~Ai~a~p~~~~~~~r~vI~Ik~G~Y~E~-V~i~~--~k~~i~l~G~g~-----------------------~~Tv 288 (539)
T PLN02995 235 FNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQEN-INVRL--NNDDIMLVGDGM-----------------------RSTI 288 (539)
T ss_pred ccCHHHHHHhcccccCCCceEEEEEeCCEeEEE-EEecC--CCCcEEEEEcCC-----------------------CCeE
Confidence 5679999876542 22346899999999643 33321 156788877652 1111
Q ss_pred EecceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEE-EeceecEEEEeEEEEC
Q 039959 160 VTGSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYF-ITGCKNIRLYHLNIIA 234 (439)
Q Consensus 160 I~G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~n~~i~~ 234 (439)
|+|.-.. +.| |. ..+. .-.....+++..+|++|+|... ..+. ....+...+.+|+|..
T Consensus 289 It~~~~~-~~~---~~------------T~~S-aT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G 351 (539)
T PLN02995 289 ITGGRSV-KGG---YT------------TYNS-ATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEG 351 (539)
T ss_pred EEeCCcc-CCC---Cc------------ccce-EEEEEECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEec
Confidence 2211000 000 00 0011 1222346788888888888642 1222 2357889999999997
Q ss_pred CCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCC------ceEEEeecCCCCCCCCEEEEEEE
Q 039959 235 PDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPG------HGISIGSLGKYTDEEDVVGINVR 308 (439)
Q Consensus 235 ~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~------~Gi~igs~g~~~~~~~v~nI~v~ 308 (439)
-. |-+.... ..-..++|+|...=|-| + |.-...++||++..- .| .|=-.|+. +...-..+.|.
T Consensus 352 ~Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI-F--G~a~avf~~C~i~~~~~~~~~~~-~iTA~~r~-~~~~~~G~vf~ 420 (539)
T PLN02995 352 YQ-----DTLMVHS-QRQFYRECYIYGTVDFI-F--GNAAAVFQNCIILPRRPLKGQAN-VITAQGRA-DPFQNTGISIH 420 (539)
T ss_pred cc-----chhccCC-CceEEEeeEEeeccceE-e--cccceEEeccEEEEecCCCCCcc-eEecCCCC-CCCCCceEEEE
Confidence 54 3443333 34688999999865544 2 345788889887421 12 12111111 22334688999
Q ss_pred eEEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 309 NCTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 309 n~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
||++.+..... ..+.+=|-....-..+.|-+..|.+.=.|
T Consensus 421 ~c~i~~~~~~~~~~~~~~~yLGRPW~~ysrvv~~~t~~~~~I~p 464 (539)
T PLN02995 421 NSRILPAPDLKPVVRTVKTYMGRPWMKFSRTVVLQTYLDNVVSP 464 (539)
T ss_pred eeEEecCCcccccccccceeccCCCCCCcceEEEeccccCcccc
Confidence 99999864211 11222222234456788999998775444
No 58
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=97.05 E-value=0.13 Score=55.30 Aligned_cols=211 Identities=18% Similarity=0.235 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
-.-||+||+++.... ..-+|+|.+|+|.=..+.+.- +|.+++|..+|. ....|+
T Consensus 284 f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~~v~i~~--~k~ni~l~G~g~-----------------------~~TiIt 338 (587)
T PLN02484 284 FKTISEAIKKAPEHSSRRTIIYVKAGRYEENNLKVGR--KKTNLMFIGDGK-----------------------GKTVIT 338 (587)
T ss_pred cccHHHHHHhccccCCCcEEEEEeCCEEEEEEEEECC--CCceEEEEecCC-----------------------CCeEEe
Confidence 466999987654322 346799999999764455531 156777777652 112222
Q ss_pred cceE-EeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GSGT-FDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~Gt-IDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
|.-. .++.+ . + + ..-.....+++..+|++|+|... ..+.+ ...+...+.+|.+..-
T Consensus 339 ~~~~~~~~~~-t-~---------------~-saT~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~ 400 (587)
T PLN02484 339 GGKSIFDNLT-T-F---------------H-TASFAATGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGY 400 (587)
T ss_pred cCCcccCCCc-c-c---------------c-eEEEEEEcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEecc
Confidence 2100 01100 0 0 0 11223356778888888887532 12222 3567888889988864
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC------Cce-EEEeecCCCCCCCCEEEEEEE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP------GHG-ISIGSLGKYTDEEDVVGINVR 308 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~------~~G-i~igs~g~~~~~~~v~nI~v~ 308 (439)
. |-+.... ..-..++|+|...=|-| -|.-...++||.+.. ..| |.-- ++. +...-..+.|.
T Consensus 401 Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avfq~C~i~~~~~~~~~~~~ITAq--~r~-~~~~~~G~vf~ 468 (587)
T PLN02484 401 Q-----DTLYVHS-NRQFFRECDIYGTVDFI---FGNAAVVLQNCSIYARKPMAQQKNTITAQ--NRK-DPNQNTGISIH 468 (587)
T ss_pred C-----cccccCC-CcEEEEecEEEecccee---cccceeEEeccEEEEecCCCCCceEEEec--CCC-CCCCCcEEEEE
Confidence 4 3443333 35678888888754543 334578888888742 112 2221 111 12334678899
Q ss_pred eEEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 309 NCTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 309 n~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
||++.....-. ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 469 ~c~i~~~~~~~~~~~~~~~yLGRPW~~ysrvV~~~s~i~~~I~p 512 (587)
T PLN02484 469 ACRILAASDLAASKGSFPTYLGRPWKLYSRTVYMMSYMGDHIHP 512 (587)
T ss_pred eeEEecCCccccccCccceeccCCCCCCceEEEEecccCCeEcc
Confidence 99988754210 11222222234457788888887765333
No 59
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=97.03 E-value=0.088 Score=56.36 Aligned_cols=210 Identities=20% Similarity=0.234 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHhhc-CCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHH-EGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~-~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=+-||+|++++... ...-+|+|.+|+|. ..+.+.-. +.+++|..+|. +...|+
T Consensus 270 f~tI~~Av~a~p~~~~~~~vI~ik~GvY~-E~V~i~~~--k~~i~~~G~g~-----------------------~~tiIt 323 (565)
T PLN02468 270 YKTISEALKDVPEKSEKRTIIYVKKGVYF-ENVRVEKK--KWNVVMVGDGM-----------------------SKTIVS 323 (565)
T ss_pred ccCHHHHHHhchhcCCCcEEEEEeCCceE-EEEEecCC--CCeEEEEecCC-----------------------CCCEEE
Confidence 46689998765442 23468999999996 34444311 45677777652 111122
Q ss_pred cce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCe----eEE-EeceecEEEEeEEEECC
Q 039959 162 GSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGF----HYF-ITGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~n~~i~~~ 235 (439)
|.. ..||.. . | +. .-.....+++..+|++|+|.... .+. ....+...+.+|+|..-
T Consensus 324 ~~~~~~dg~~-t-~---------------~s-aT~~v~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~ 385 (565)
T PLN02468 324 GSLNFVDGTP-T-F---------------ST-ATFAVFGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAF 385 (565)
T ss_pred eCCccCCCCC-c-c---------------ce-eeeeEECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEec
Confidence 110 011111 0 0 11 12223457889999999886431 222 24678899999999975
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ce-EEEeecCCCCCCCCEEEEEEE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HG-ISIGSLGKYTDEEDVVGINVR 308 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~G-i~igs~g~~~~~~~v~nI~v~ 308 (439)
. |-+.... ..-..++|+|...=|-| -|.-.+.++||.+.. + .+ |.-- |+. +...-..+.|.
T Consensus 386 Q-----DTLy~~~-~rq~y~~C~I~GtvDFI---FG~a~avfq~c~i~~~~~~~~~~~~iTA~--~r~-~~~~~~G~vf~ 453 (565)
T PLN02468 386 Q-----DTLYAHA-QRQFYRECNIYGTVDFI---FGNSAVVFQNCNILPRRPMKGQQNTITAQ--GRT-DPNQNTGISIQ 453 (565)
T ss_pred c-----chhccCC-CceEEEeeEEeccccee---eccceEEEeccEEEEecCCCCCCceEEec--CCC-CCCCCceEEEE
Confidence 4 4444443 34568999999765544 344678899998742 1 12 2221 111 22344679999
Q ss_pred eEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 309 NCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 309 n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
||++......-..+++=|-....-..+.|.+..|.+.=.|
T Consensus 454 ~c~i~~~~~~~~~~~yLGRPW~~~sr~v~~~s~~~~~I~p 493 (565)
T PLN02468 454 NCTILPLGDLTSVKTFLGRPWKNYSTTVIMHSMMGSLIDP 493 (565)
T ss_pred ccEEecCCCccccceeeecCCCCCceEEEEecccCCeEcc
Confidence 9999986432122222222234456788888888775333
No 60
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=97.02 E-value=0.013 Score=54.39 Aligned_cols=118 Identities=19% Similarity=0.172 Sum_probs=75.2
Q ss_pred eEE-eeeccEEEEeeEEec---------------CCCeeEEEeceecEEEEeEEEECCCC---CCCCCc-eeee-CceeE
Q 039959 194 IQF-VEVSNAIVRGITSVN---------------SKGFHYFITGCKNIRLYHLNIIAPDE---SPNTDG-IHIS-QSDVV 252 (439)
Q Consensus 194 i~~-~~~~nv~I~~v~i~n---------------s~~~~i~~~~~~nv~i~n~~i~~~~~---~~n~DG-I~i~-~s~nv 252 (439)
+.+ .+++||.|+++++++ .....+.+..+++|.|++|++..... ....|| +++. .+++|
T Consensus 39 ~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~v 118 (200)
T PF00544_consen 39 LRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNV 118 (200)
T ss_dssp EEEEESCEEEEEES-EEECEEEECSTEEETTEEECS--SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEE
T ss_pred EEEecCCCeEEEECCEEEeccccCCcccCCCccccCCCeEEEEecccEEEeccEEeccccccccccCCceEEEEeCCceE
Confidence 444 489999999999998 23456999999999999999997511 112566 5665 58999
Q ss_pred EEEeeEEecCCceEEecCC-------ceeEEEEeeEecCCce--EEEeecCCCCCCCCEEEEEEEeEEEeC-CcceEEE
Q 039959 253 KIAKSYIGTGDDCVGMIRG-------SSNVSVKKVTCGPGHG--ISIGSLGKYTDEEDVVGINVRNCTITG-TQNGVRV 321 (439)
Q Consensus 253 ~I~n~~i~~gDD~i~i~~g-------s~nV~I~n~~~~~~~G--i~igs~g~~~~~~~v~nI~v~n~~~~~-~~~gi~I 321 (439)
+|++|.|...+.+..+++. ..+|++.++.+....+ =.+ +. -.+++-|+.+.+ ...++..
T Consensus 119 TiS~n~f~~~~k~~l~G~~d~~~~~~~~~vT~hhN~f~~~~~R~P~~-------r~---G~~Hv~NN~~~~~~~y~i~~ 187 (200)
T PF00544_consen 119 TISNNIFDNHNKTMLIGSSDSNSTDRGLRVTFHHNYFANTNSRNPRV-------RF---GYVHVYNNYYYNWSGYAIGA 187 (200)
T ss_dssp EEES-EEEEEEETCEESSCTTCGGGTTEEEEEES-EEEEEEE-TTEE-------CS---CEEEEES-EEEEECSESEEE
T ss_pred EEEchhccccccccccCCCCCccccCCceEEEEeEEECchhhCCCcc-------cc---cEEEEEEeeeECCCCEEEEc
Confidence 9999999876554444442 3689999998853321 011 11 247788886655 4556655
No 61
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=97.02 E-value=0.12 Score=54.65 Aligned_cols=210 Identities=18% Similarity=0.218 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhhc-CCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHH-EGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~-~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++... ...-+|+|.+|+|. ..+.++- ++.+++|..+|. ....|+
T Consensus 218 f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~-E~V~I~~--~k~~i~l~G~g~-----------------------~~TiIt 271 (520)
T PLN02201 218 FTTIMDAVLAAPDYSTKRYVIYIKKGVYL-ENVEIKK--KKWNIMMVGDGI-----------------------DATVIT 271 (520)
T ss_pred ccCHHHHHHhchhcCCCcEEEEEeCceeE-EEEEecC--CCceEEEEecCC-----------------------CCcEEE
Confidence 56799998665432 23468999999996 3344431 145677777642 111122
Q ss_pred cceE-EeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GSGT-FDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~Gt-IDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
+... .|| |.. .+. .-.....+++..+|++|+|... ..+.+ ...+...+.+|.+..-
T Consensus 272 ~~~~~~~g-----~~T------------~~S-AT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~ 333 (520)
T PLN02201 272 GNRSFIDG-----WTT------------FRS-ATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGY 333 (520)
T ss_pred eCCccCCC-----Ccc------------cce-EEEEEECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeecc
Confidence 1100 011 100 011 1223457788889999988642 12222 3568889999999864
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ce-EEEeecCCCCCCCCEEEEEEE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HG-ISIGSLGKYTDEEDVVGINVR 308 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~G-i~igs~g~~~~~~~v~nI~v~ 308 (439)
. |-+.... ..-..++|+|...=|-| -|.-...++||++.. + .| |.-- ++ .+...-..+.|.
T Consensus 334 Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avf~~C~i~~~~~~~~~~~~iTAq--~r-~~~~~~~Gfvf~ 401 (520)
T PLN02201 334 Q-----DTLYTHT-MRQFYRECRITGTVDFI---FGDATAVFQNCQILAKKGLPNQKNTITAQ--GR-KDPNQPTGFSIQ 401 (520)
T ss_pred C-----CeeEeCC-CCEEEEeeEEeecccEE---ecCceEEEEccEEEEecCCCCCCceEEec--CC-CCCCCCcEEEEE
Confidence 4 4554443 34677899999865544 234578899998742 1 23 3221 11 122334678899
Q ss_pred eEEEeCCcceEE----EEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 309 NCTITGTQNGVR----VKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 309 n~~~~~~~~gi~----Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
||++........ .+.+=|-....-..+.|.+..|.+.=.|
T Consensus 402 ~C~it~~~~~~~~~~~~~~yLGRPW~~ysrvv~~~t~l~~~I~p 445 (520)
T PLN02201 402 FSNISADTDLLPYLNTTATYLGRPWKLYSRTVFMQNYMSDAIRP 445 (520)
T ss_pred eeEEecCccccccccccceEeecCCCCCceEEEEecCcCCeEcc
Confidence 999987542110 1111121234457788888888875333
No 62
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=97.02 E-value=0.052 Score=58.08 Aligned_cols=210 Identities=22% Similarity=0.265 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHhhc----CCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeece
Q 039959 83 HMAFVKAFEAACHH----EGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGL 158 (439)
Q Consensus 83 t~a~~~A~~~a~~~----~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV 158 (439)
=.-||+||+++... .+.-+|+|.+|+|. ..+.+.- +|.+++|..+|. ...
T Consensus 262 f~TIq~Av~a~p~~~~~~~~~~vI~Ik~G~Y~-E~V~i~~--~k~~i~l~G~g~-----------------------~~T 315 (566)
T PLN02713 262 FTTINDAVAAAPNNTDGSNGYFVIYVTAGVYE-EYVSIPK--NKKYLMMIGDGI-----------------------NQT 315 (566)
T ss_pred CCCHHHHHHhhhcccCCCCceEEEEEcCcEEE-EEEEecC--CCceEEEEecCC-----------------------CCc
Confidence 45699998765432 12357999999996 3344421 156677776651 112
Q ss_pred EEecceE-EeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEE-EeceecEEEEeEEE
Q 039959 159 VVTGSGT-FDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYF-ITGCKNIRLYHLNI 232 (439)
Q Consensus 159 ~I~G~Gt-IDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~n~~i 232 (439)
.|+|... .|| |.. .+...+. ...+++..+|++|+|... ..+. ....+...+.+|+|
T Consensus 316 iIt~~~~~~~g-----~~T------------~~SaT~~-v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~ 377 (566)
T PLN02713 316 VITGNRSVVDG-----WTT------------FNSATFA-VVGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSF 377 (566)
T ss_pred EEEcCCcccCC-----Ccc------------ccceeEE-EECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeee
Confidence 2222110 111 110 1112233 346889999999998632 1222 23578889999999
Q ss_pred ECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCC------ce-EEEeecCCCCCCCCEEEE
Q 039959 233 IAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPG------HG-ISIGSLGKYTDEEDVVGI 305 (439)
Q Consensus 233 ~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~------~G-i~igs~g~~~~~~~v~nI 305 (439)
..-. |-+.... ..-..++|+|...=|-| -|.-.+.++||.+..- .| |.-- |+. +...-..+
T Consensus 378 ~G~Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avfq~C~i~~~~~~~~~~~~iTAq--~r~-~~~~~~G~ 445 (566)
T PLN02713 378 EAYQ-----DTLYTHS-LRQFYRECDIYGTVDFI---FGNAAVVFQNCNLYPRLPMQGQFNTITAQ--GRT-DPNQNTGT 445 (566)
T ss_pred ccCC-----cceEECC-CCEEEEeeEEeccccee---cccceEEEeccEEEEecCCCCCcceeeec--CCC-CCCCCCEE
Confidence 8644 4555443 35688999998755544 3446788999987421 12 2221 111 22334678
Q ss_pred EEEeEEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 306 NVRNCTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 306 ~v~n~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
.|.||++....... ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 446 vf~~c~i~~~~~~~~~~~~~~~yLGRPW~~ysr~V~~~s~~~~~I~p 492 (566)
T PLN02713 446 SIQNCTIKAADDLASSNYTVKTYLGRPWKEYSRTVVMQSYIDGLIDP 492 (566)
T ss_pred EEEcCEEecCCcccccccccceeeecCCCCcceEEEEecccCCeecc
Confidence 99999998864211 12222222234457788888888775333
No 63
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=96.97 E-value=0.077 Score=56.38 Aligned_cols=206 Identities=17% Similarity=0.216 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHhhc-CCCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHH-EGKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~-~~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+|++++... .+.-+|+|.+|+|.=. +.+.. ++.+++|..+|. ....|+
T Consensus 244 f~TIq~Av~a~p~~~~~r~vI~Vk~GvY~E~-V~I~~--~k~~i~l~G~g~-----------------------~~tiIt 297 (537)
T PLN02506 244 YRTITEAINEAPNHSNRRYIIYVKKGVYKEN-IDMKK--KKTNIMLVGDGI-----------------------GQTVVT 297 (537)
T ss_pred ccCHHHHHHhchhcCCCcEEEEEeCCeeeEE-EeccC--CCceEEEEEcCC-----------------------CCeEEE
Confidence 45699998765443 2346899999999532 23321 145677766541 111222
Q ss_pred cceEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEE-EeceecEEEEeEEEECCC
Q 039959 162 GSGTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYF-ITGCKNIRLYHLNIIAPD 236 (439)
Q Consensus 162 G~GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~n~~i~~~~ 236 (439)
+.... ..| |. ..+. .-.....+++..+|++|+|... -.+. ....+.+.+.+|.|..-.
T Consensus 298 ~~~~~-~~g---~~------------T~~s-aT~~v~~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~Q 360 (537)
T PLN02506 298 GNRNF-MQG---WT------------TFRT-ATVAVSGRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQ 360 (537)
T ss_pred eCccc-cCC---CC------------cccc-eEEEEEcCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeccc
Confidence 21000 001 10 0111 2234567889999999998732 1222 235788999999998754
Q ss_pred CCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCC------ce-EEEeecCCCCCCCCEEEEEEEe
Q 039959 237 ESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPG------HG-ISIGSLGKYTDEEDVVGINVRN 309 (439)
Q Consensus 237 ~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~------~G-i~igs~g~~~~~~~v~nI~v~n 309 (439)
|-+.... ..-..++|+|...=|-| + |.-...++||.+..- .| |.- .|+. +...-..+.|.|
T Consensus 361 -----DTLy~~~-~rqyy~~C~I~GtVDFI-F--G~a~avfq~C~i~~r~~~~~~~~~iTA--~~r~-~~~~~~G~vf~~ 428 (537)
T PLN02506 361 -----DTLYAHS-LRQFYRECEIYGTIDFI-F--GNGAAVLQNCKIYTRVPLPLQKVTITA--QGRK-SPHQSTGFSIQD 428 (537)
T ss_pred -----ccceecC-CceEEEeeEEecccceE-c--cCceeEEeccEEEEccCCCCCCceEEc--cCCC-CCCCCcEEEEEc
Confidence 4444333 34688999998765544 2 345688899987421 12 222 1111 222346788999
Q ss_pred EEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 310 CTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 310 ~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
|++.... ...++ -..+.-..+.|-+..|.+.=.|
T Consensus 429 c~i~~~~-~~yLG----RPW~~~sr~v~~~t~l~~~I~p 462 (537)
T PLN02506 429 SYVLATQ-PTYLG----RPWKQYSRTVFMNTYMSQLVQP 462 (537)
T ss_pred CEEccCC-ceEEe----cCCCCCceEEEEecCCCCeecC
Confidence 9988753 34442 1123456788888888775333
No 64
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=96.96 E-value=0.11 Score=52.36 Aligned_cols=85 Identities=15% Similarity=0.027 Sum_probs=54.2
Q ss_pred eeeccEEEEeeEEecCC-CeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeE
Q 039959 197 VEVSNAIVRGITSVNSK-GFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNV 275 (439)
Q Consensus 197 ~~~~nv~I~~v~i~ns~-~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV 275 (439)
.+-.+|++.|+.+...+ .-++.+....++.+.++.+.+.. |.-+..-....|++|+|..-.-||.- .+...+
T Consensus 118 ~gM~~VtF~ni~F~~~~~~~g~~f~~~t~~~~hgC~F~gf~------g~cl~~~~~~~VrGC~F~~C~~gi~~-~~~~~l 190 (386)
T PF01696_consen 118 VGMEGVTFVNIRFEGRDTFSGVVFHANTNTLFHGCSFFGFH------GTCLESWAGGEVRGCTFYGCWKGIVS-RGKSKL 190 (386)
T ss_pred eeeeeeEEEEEEEecCCccceeEEEecceEEEEeeEEecCc------ceeEEEcCCcEEeeeEEEEEEEEeec-CCcceE
Confidence 34456677777776655 45566666777788888877632 34445556777888888765544422 235677
Q ss_pred EEEeeEecCCc-eE
Q 039959 276 SVKKVTCGPGH-GI 288 (439)
Q Consensus 276 ~I~n~~~~~~~-Gi 288 (439)
.|++|.|+... ||
T Consensus 191 sVk~C~FekC~igi 204 (386)
T PF01696_consen 191 SVKKCVFEKCVIGI 204 (386)
T ss_pred EeeheeeeheEEEE
Confidence 77888777653 44
No 65
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=96.81 E-value=0.29 Score=51.30 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+||+++.... ..-+|+|.+|+|.= .+.+.- +|++++|..+|. ....|+
T Consensus 209 f~TIq~AI~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~--~k~nItliGdg~-----------------------~~TiIt 262 (509)
T PLN02488 209 YNTVNAAIAAAPEHSRKRFVIYIKTGVYDE-IVRIGS--TKPNLTLIGDGQ-----------------------DSTIIT 262 (509)
T ss_pred ccCHHHHHHhchhcCCCcEEEEEeCCeeEE-EEEecC--CCccEEEEecCC-----------------------CceEEE
Confidence 456999987654422 34689999999963 344421 156788877651 011111
Q ss_pred cce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
|.- .-+|.+ . .+. +-.....+++..+|++|+|... ..+.+ ..++...+.+|.|..-
T Consensus 263 ~n~~~~~g~~-T----------------~~S-ATv~v~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~Gy 324 (509)
T PLN02488 263 GNLSASNGKR-T----------------FYT-ATVASNGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGY 324 (509)
T ss_pred EcccccCCCC-c----------------eee-EEEEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecc
Confidence 100 001100 0 011 1222346678888888887642 12222 3578889999999864
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ceEEEeecCCCCCCCCEEEEEEEe
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HGISIGSLGKYTDEEDVVGINVRN 309 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~Gi~igs~g~~~~~~~v~nI~v~n 309 (439)
. |-+... +..-..++|+|...=|-| -|.-...++||.+.. + .+ .|=-.++ .+...-..+.|.|
T Consensus 325 Q-----DTLy~~-~~RqyyrdC~I~GtVDFI---FG~a~avFq~C~I~sr~~~~~~~~-~ITAq~R-~~~~~~tGfvf~~ 393 (509)
T PLN02488 325 Q-----DALYPH-RDRQFYRECFITGTVDFI---CGNAAAVFQFCQIVARQPMMGQSN-VITAQSR-ESKDDNSGFSIQK 393 (509)
T ss_pred C-----cceeeC-CCCEEEEeeEEeeccceE---ecceEEEEEccEEEEecCCCCCCE-EEEeCCC-CCCCCCcEEEEEe
Confidence 4 445433 346788999998865554 244678899998742 1 23 2211111 1223346789999
Q ss_pred EEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEecc
Q 039959 310 CTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 310 ~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
|++....... ..+++=|-....-+.+.|-+..|.+.
T Consensus 394 C~it~~~~~~~~~~~~~~YLGRPW~~ySrvVf~~s~i~~~ 433 (509)
T PLN02488 394 CNITASSDLDPVKATVKTYLGRPWRKYSTVAVLQSFIGDL 433 (509)
T ss_pred eEEecCCcccccccccceeecCCCCCCccEEEEeccCCCe
Confidence 9998864311 12222222234456777888877764
No 66
>PLN02314 pectinesterase
Probab=96.80 E-value=0.18 Score=54.28 Aligned_cols=210 Identities=18% Similarity=0.228 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
-.-||+|++++.... ..-+|+|.+|+|.= .+.+.- ++.+++|..+|. ....|+
T Consensus 290 f~TI~~Av~a~p~~~~~r~vI~ik~G~Y~E-~V~i~~--~k~~i~l~G~g~-----------------------~~tiIt 343 (586)
T PLN02314 290 VKTINEAVASIPKKSKSRFVIYVKEGTYVE-NVLLDK--SKWNVMIYGDGK-----------------------DKTIIS 343 (586)
T ss_pred ccCHHHHHhhccccCCceEEEEEcCceEEE-EEEecC--CCceEEEEecCC-----------------------CCcEEE
Confidence 456999987654322 33579999999963 344421 156777777652 111122
Q ss_pred cce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEE-EeceecEEEEeEEEECC
Q 039959 162 GSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYF-ITGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~n~~i~~~ 235 (439)
|.. ..||.. .+ +. .-.....+++..+|++|+|... ..+. ....+...+.+|.+..-
T Consensus 344 ~~~~~~~g~~-t~----------------~s-aT~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~ 405 (586)
T PLN02314 344 GSLNFVDGTP-TF----------------ST-ATFAAAGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAF 405 (586)
T ss_pred ecCCcCCCCC-cc----------------ce-EEEEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEec
Confidence 110 011111 11 11 1223357788889999998632 1222 34578888999999974
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ceEEEeecCCCCCCCCEEEEEEEe
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HGISIGSLGKYTDEEDVVGINVRN 309 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~Gi~igs~g~~~~~~~v~nI~v~n 309 (439)
. |-+...+ ..-..++|+|...=|-| -|.-...++||.+.. + .+ .|-..|+ .+...-..+.|.|
T Consensus 406 Q-----DTLy~~~-~rq~y~~C~I~GtvDFI---FG~a~avf~~c~i~~~~~~~~~~~-~iTA~~r-~~~~~~~G~vf~~ 474 (586)
T PLN02314 406 Q-----DTLYAHS-NRQFYRDCDITGTIDFI---FGNAAVVFQNCNIQPRQPLPNQFN-TITAQGK-KDPNQNTGISIQR 474 (586)
T ss_pred c-----chheeCC-CCEEEEeeEEEecccee---ccCceeeeeccEEEEecCCCCCCc-eEecCCC-CCCCCCCEEEEEe
Confidence 4 4444433 35688999998765544 334578899998742 1 12 1211111 1223456789999
Q ss_pred EEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 310 CTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 310 ~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
|++.+... +..+++=|-....-..+.|.+..|.+.=.|
T Consensus 475 c~i~~~~~-~~~~~yLGRpW~~ysr~v~~~s~i~~~I~p 512 (586)
T PLN02314 475 CTISAFGN-LTAPTYLGRPWKDFSTTVIMQSYIGSFLNP 512 (586)
T ss_pred eEEecCCc-ccccccccCCCCCCceEEEEecccCCcccc
Confidence 99988652 222333222234456788888888876444
No 67
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=96.76 E-value=0.16 Score=54.20 Aligned_cols=212 Identities=19% Similarity=0.246 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=+-||+||+++.... ..-+|+|.+|+|. ..+.++ .++++++|..+|. ....|+
T Consensus 242 f~TIq~Ai~a~p~~~~~r~vI~Ik~GvY~-E~V~i~--~~k~~i~l~G~g~-----------------------~~TiIt 295 (541)
T PLN02416 242 FSTITDAINFAPNNSNDRIIIYVREGVYE-ENVEIP--IYKTNIVLIGDGS-----------------------DVTFIT 295 (541)
T ss_pred ccCHHHHHHhhhhcCCceEEEEEeCceeE-EEEecC--CCCccEEEEecCC-----------------------CceEEe
Confidence 466899987654432 2357899999995 334442 1156788777652 111122
Q ss_pred cceE-EeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCCe----eEE-EeceecEEEEeEEEECC
Q 039959 162 GSGT-FDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGF----HYF-ITGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~Gt-IDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~n~~i~~~ 235 (439)
|... .|| |.. .+...+. ...+++..+|++|+|.... .+. ....+.+.+.+|+|...
T Consensus 296 ~~~~~~~g-----~~T------------~~saT~~-v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~ 357 (541)
T PLN02416 296 GNRSVVDG-----WTT------------FRSATLA-VSGEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGY 357 (541)
T ss_pred CCCccCCC-----CCc------------cceEEEE-EECCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEecc
Confidence 2100 011 110 0112233 3478889999999986432 122 23568899999999975
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC---Cce--EEEeecCCCCCCCCEEEEEEEeE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP---GHG--ISIGSLGKYTDEEDVVGINVRNC 310 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~---~~G--i~igs~g~~~~~~~v~nI~v~n~ 310 (439)
. |-+...+ ..-..++|+|...=|-| -|.-...++||++.. ..| -.|=-.++ .+...-..+.|.||
T Consensus 358 Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avfq~c~i~~~~~~~~~~~~iTA~~r-~~~~~~~G~vf~~c 427 (541)
T PLN02416 358 Q-----DTLYVHS-FRQFYRECDIYGTIDYI---FGNAAVVFQACNIVSKMPMPGQFTVITAQSR-DTPDEDTGISIQNC 427 (541)
T ss_pred c-----chhccCC-CceEEEeeEEeecccee---eccceEEEeccEEEEecCCCCCceEEECCCC-CCCCCCCEEEEEee
Confidence 4 3443333 45688999999865544 234578888888742 111 11211111 12233467889999
Q ss_pred EEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 311 TITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 311 ~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
++.....-. ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 428 ~i~~~~~~~~~~~~~~~yLGRPW~~~sr~v~~~s~i~~~I~p 469 (541)
T PLN02416 428 SILATEDLYSNSNSVKSYLGRPWRVYSRTVVLESYIDDFIDP 469 (541)
T ss_pred EEecCCccccccccccccccCCCCCCccEEEEecccCCeecc
Confidence 998754210 12222222234456788888888775333
No 68
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=96.75 E-value=0.13 Score=54.80 Aligned_cols=210 Identities=17% Similarity=0.211 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHhhcC----CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeece
Q 039959 83 HMAFVKAFEAACHHE----GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGL 158 (439)
Q Consensus 83 t~a~~~A~~~a~~~~----~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV 158 (439)
=.-||+||+++.... +.-+|+|.+|+|.= .+.+.- +|.+++|..+|. ...
T Consensus 235 f~TI~~Av~a~p~~~~~~~~r~vI~vk~G~Y~E-~V~i~~--~k~~i~l~G~g~-----------------------~~t 288 (538)
T PLN03043 235 FTTITDAIAAAPNNSKPEDGYFVIYAREGYYEE-YVVVPK--NKKNIMLIGDGI-----------------------NKT 288 (538)
T ss_pred CcCHHHHHHhccccCCCCcceEEEEEcCeeeEE-EEEeCC--CCCcEEEEecCC-----------------------CCe
Confidence 467999986554322 13589999999953 344421 156778777651 112
Q ss_pred EEecce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEE
Q 039959 159 VVTGSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNI 232 (439)
Q Consensus 159 ~I~G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i 232 (439)
.|+|.- ..|| |.. .+. +-.....+++..+|++|+|... -.+.+ ...+...+.+|.|
T Consensus 289 iIt~~~~~~dg-----~~T------------~~s-aT~~v~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~ 350 (538)
T PLN03043 289 IITGNHSVVDG-----WTT------------FNS-STFAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSF 350 (538)
T ss_pred EEEeCCccCCC-----Ccc------------ccc-eEEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEE
Confidence 222210 0111 110 111 2233356889999999998642 12322 3567889999999
Q ss_pred ECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ce-EEEeecCCCCCCCCEEEE
Q 039959 233 IAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HG-ISIGSLGKYTDEEDVVGI 305 (439)
Q Consensus 233 ~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~G-i~igs~g~~~~~~~v~nI 305 (439)
..-. |-+...+ ..-..++|+|...=|-| + |.-...++||.+.. + .+ |..- |+. +...-..+
T Consensus 351 ~gyQ-----DTLy~~~-~rq~y~~c~I~GtVDFI-F--G~a~avfq~c~i~~r~~~~~~~~~iTA~--~r~-~~~~~tG~ 418 (538)
T PLN03043 351 EGYQ-----DTLYVHS-LRQFYRECDIYGTVDFI-F--GNAAAIFQNCNLYARKPMANQKNAFTAQ--GRT-DPNQNTGI 418 (538)
T ss_pred eccC-----cccccCC-CcEEEEeeEEeeccceE-e--ecceeeeeccEEEEecCCCCCCceEEec--CCC-CCCCCceE
Confidence 9754 4444433 35688999998765544 2 34578889998742 1 12 3321 111 22334678
Q ss_pred EEEeEEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 306 NVRNCTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 306 ~v~n~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
.|.||++.....-. ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 419 ~~~~c~i~~~~~~~~~~~~~~~yLGRpW~~ysr~v~~~s~i~~~I~p 465 (538)
T PLN03043 419 SIINCTIEAAPDLAMDPNSTMNFLGRPWKPYSRTVYMQSYIGDLIQP 465 (538)
T ss_pred EEEecEEecCCcccccccccceeccCCCCCCceEEEEecccCCeecc
Confidence 89999998864210 11222222234457788888888775444
No 69
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=96.71 E-value=0.18 Score=54.87 Aligned_cols=142 Identities=17% Similarity=0.203 Sum_probs=87.1
Q ss_pred eeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCC
Q 039959 197 VEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRG 271 (439)
Q Consensus 197 ~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~g 271 (439)
...+++..+|++|+|... ..+.+ ...+...+.+|.|..-. |-+.... ..-.+++|+|...=|-| -|
T Consensus 334 v~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG 404 (670)
T PLN02217 334 IVGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQ-----DTLYAHS-HRQFYRDCTISGTIDFL---FG 404 (670)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeecc-----chhccCC-CcEEEEeCEEEEeccEE---ec
Confidence 347788899999998643 12222 45789999999999644 4444433 45688999999765544 23
Q ss_pred ceeEEEEeeEecCC-----ceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEE----EEecCCCCCcceeeEEEEeEEE
Q 039959 272 SSNVSVKKVTCGPG-----HGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVR----VKTWPGAPASHASNFMFTDIVM 342 (439)
Q Consensus 272 s~nV~I~n~~~~~~-----~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~----Iks~~g~~~g~v~nI~f~ni~~ 342 (439)
.-...++||.+..- ..-.|--.|+ .+...-..+.|.||++.+...-+. .+.+=|-....-..+.|.+..|
T Consensus 405 ~a~avfq~C~I~~r~~~~~~~~~ITAqgr-~~~~~~tGfvf~~C~i~~~~~~~~~~~~~~~yLGRPW~~ysrvVf~~t~l 483 (670)
T PLN02217 405 DAAAVFQNCTLLVRKPLLNQACPITAHGR-KDPRESTGFVLQGCTIVGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFI 483 (670)
T ss_pred CceEEEEccEEEEccCCCCCceeEecCCC-CCCCCCceEEEEeeEEecCccccccccccceeeccCCCCCceEEEEeccc
Confidence 45789999988521 1112211111 122345679999999998642111 1222222234567888888888
Q ss_pred eccCcc
Q 039959 343 INVSNP 348 (439)
Q Consensus 343 ~~~~~~ 348 (439)
.+.=.|
T Consensus 484 ~~~I~P 489 (670)
T PLN02217 484 PDFVPP 489 (670)
T ss_pred CCeEcC
Confidence 775433
No 70
>PLN02197 pectinesterase
Probab=96.69 E-value=0.23 Score=53.27 Aligned_cols=142 Identities=15% Similarity=0.181 Sum_probs=86.4
Q ss_pred eeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCC
Q 039959 197 VEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRG 271 (439)
Q Consensus 197 ~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~g 271 (439)
...+++..+|++|+|... ..+.+ ...+...+.+|.|..-. |-+.... ..-..++|+|...=|-| -|
T Consensus 361 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQ-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG 431 (588)
T PLN02197 361 VESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQ-----DTLYVNN-GRQFYRNIVVSGTVDFI---FG 431 (588)
T ss_pred EECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecC-----cceEecC-CCEEEEeeEEEeccccc---cc
Confidence 357889999999998542 12322 35788999999999744 4555443 45688999999865544 23
Q ss_pred ceeEEEEeeEecC---Cce--EEEeecCCCCC-CCCEEEEEEEeEEEeCCcce----EEEEecCCCCCcceeeEEEEeEE
Q 039959 272 SSNVSVKKVTCGP---GHG--ISIGSLGKYTD-EEDVVGINVRNCTITGTQNG----VRVKTWPGAPASHASNFMFTDIV 341 (439)
Q Consensus 272 s~nV~I~n~~~~~---~~G--i~igs~g~~~~-~~~v~nI~v~n~~~~~~~~g----i~Iks~~g~~~g~v~nI~f~ni~ 341 (439)
.....++||.+.. ..| -.|=-.|+. + ...-..+.|.||++.+...- ...+++=|-....-..+.|-+..
T Consensus 432 ~a~avfq~C~i~~r~~~~~~~~~iTAqgr~-~~~~~~tG~vf~~C~it~~~~~~~~~~~~~~yLGRPW~~ysrvV~~~s~ 510 (588)
T PLN02197 432 KSATVIQNSLIVVRKGSKGQYNTVTADGNE-KGLAMKIGIVLQNCRIVPDKKLTAERLTVASYLGRPWKKFSTTVIISTE 510 (588)
T ss_pred ceeeeeecCEEEEecCCCCCceeEECCCCC-CCCCCCcEEEEEccEEecCCcccccccccccccCCCCCCCceEEEEecc
Confidence 4468899998742 112 122111111 1 13346789999999986421 12233322223456788888888
Q ss_pred EeccCcc
Q 039959 342 MINVSNP 348 (439)
Q Consensus 342 ~~~~~~~ 348 (439)
|.+.=.|
T Consensus 511 ~~~~I~p 517 (588)
T PLN02197 511 IGDLIRP 517 (588)
T ss_pred cCCeecC
Confidence 8765444
No 71
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=96.63 E-value=0.32 Score=51.91 Aligned_cols=210 Identities=18% Similarity=0.210 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=..||+|++++.... ..-+|+|.+|+|.- .+.+.- ++++++|..+|. ..-.|+
T Consensus 248 f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E-~V~i~~--~k~~i~l~G~g~-----------------------~~TiIt 301 (548)
T PLN02301 248 YKTVKEAVASAPDNSKTRYVIYVKKGTYKE-NVEIGK--KKKNLMLVGDGM-----------------------DSTIIT 301 (548)
T ss_pred cccHHHHHHhhhhcCCceEEEEEeCceeeE-EEEecC--CCceEEEEecCC-----------------------CCcEEE
Confidence 467999987665432 23589999999963 344431 146777776652 111122
Q ss_pred cce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
|.. ..||.+ . .+. .-.....+++..+|++|+|... ..+.+ ...+...+.+|+|..-
T Consensus 302 ~~~~~~dg~~-T----------------~~S-aT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~ 363 (548)
T PLN02301 302 GSLNVIDGST-T----------------FRS-ATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAY 363 (548)
T ss_pred eCCccCCCCC-c----------------eee-EEEEEECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeec
Confidence 110 001110 0 011 2233356788889999998642 12222 3578899999999975
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC-----C-ce-EEEeecCCCCCCCCEEEEEEE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP-----G-HG-ISIGSLGKYTDEEDVVGINVR 308 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~-----~-~G-i~igs~g~~~~~~~v~nI~v~ 308 (439)
. |-+...+ ..-..++|+|...=|-| -|.-...++||++.. + .+ |..- |+. +...-..+.|.
T Consensus 364 Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI---FG~a~avfq~c~i~~~~~~~~~~~~iTAq--gr~-~~~~~tG~vf~ 431 (548)
T PLN02301 364 Q-----DTLYAHS-LRQFYRDSYITGTVDFI---FGNAAVVFQNCKIVARKPMAGQKNMVTAQ--GRT-DPNQNTGISIQ 431 (548)
T ss_pred c-----ccceecC-CcEEEEeeEEEecccee---cccceeEEeccEEEEecCCCCCCceEEec--CCC-CCCCCCEEEEE
Confidence 4 4444433 34688999999865544 344678899998742 1 12 2221 111 22345689999
Q ss_pred eEEEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 309 NCTITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 309 n~~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
||++.....-. ..+++=|-....-..+.|.+..|.+.=.|
T Consensus 432 ~c~i~~~~~~~~~~~~~~~yLGRPW~~ysr~V~~~s~l~~~I~p 475 (548)
T PLN02301 432 KCDIIASSDLEPVKGSFKTYLGRPWKEYSRTVVMQSYIDDHIDP 475 (548)
T ss_pred eeEEecCccccccccccceeeecCCCCCceEEEEecccCCeecc
Confidence 99999864211 11222221234457788888888775443
No 72
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=96.59 E-value=0.25 Score=53.27 Aligned_cols=212 Identities=19% Similarity=0.257 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
=.-||+|++++.... +.-+|+|.+|+|.= .+.+.- ++.+++|..+|. ....|+
T Consensus 287 f~TI~~Av~a~p~~~~~r~vI~ik~GvY~E-~V~i~~--~k~ni~l~Gdg~-----------------------~~TiIt 340 (587)
T PLN02313 287 FTTVAAAVAAAPEKSNKRFVIHIKAGVYRE-NVEVTK--KKKNIMFLGDGR-----------------------GKTIIT 340 (587)
T ss_pred CccHHHHHHhccccCCceEEEEEeCceeEE-EEEeCC--CCCeEEEEecCC-----------------------CccEEE
Confidence 467999987654322 33589999999963 333321 145677766652 112222
Q ss_pred cc-eEEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GS-GTFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~-GtIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
|. ...||.+ . .+. .-.....+++..+|++|+|... ..+.+ ...+...+.+|.|..-
T Consensus 341 ~~~~~~~g~~-t----------------~~s-at~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~ 402 (587)
T PLN02313 341 GSRNVVDGST-T----------------FHS-ATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAY 402 (587)
T ss_pred eCCcccCCCC-c----------------eee-EEEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecc
Confidence 21 0111110 0 011 1222346788888999988643 12222 3578889999999964
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC---Cce--EEEeecCCCCCCCCEEEEEEEeE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP---GHG--ISIGSLGKYTDEEDVVGINVRNC 310 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~---~~G--i~igs~g~~~~~~~v~nI~v~n~ 310 (439)
. |-+...+ ..-..++|+|...=|-| -|.-...++||.+.. ..| -.|--.|+. +...-..+.|.||
T Consensus 403 Q-----DTLy~~~-~rq~y~~c~I~GtvDFI---FG~a~avfq~c~i~~r~~~~~~~~~iTAqgr~-~~~~~tG~v~~~c 472 (587)
T PLN02313 403 Q-----DTLYVHS-NRQFFVKCHITGTVDFI---FGNAAAVLQDCDINARRPNSGQKNMVTAQGRS-DPNQNTGIVIQNC 472 (587)
T ss_pred c-----chhccCC-CcEEEEeeEEeecccee---ccceeEEEEccEEEEecCCCCCcceEEecCCC-CCCCCceEEEEec
Confidence 4 4444433 34588999999866654 244678899998742 111 112111211 2234568899999
Q ss_pred EEeCCcceE----EEEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 311 TITGTQNGV----RVKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 311 ~~~~~~~gi----~Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
++.....-. ..+++=|-....-..+.|-+..|.+.=.|
T Consensus 473 ~i~~~~~~~~~~~~~~~yLGRPW~~ysr~v~~~s~i~~~I~p 514 (587)
T PLN02313 473 RIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRP 514 (587)
T ss_pred EEecCCccccccccchhhccCCCCCCccEEEEecccCCeEcC
Confidence 998865311 12222222234456678888887765333
No 73
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=96.51 E-value=0.43 Score=51.25 Aligned_cols=213 Identities=18% Similarity=0.217 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHhhcC-CCcEEEEcCcEEEEeeEEeeCccCCCCeEEEEccEEEEeecCCCCCCCCceeEEEeeeeceEEe
Q 039959 83 HMAFVKAFEAACHHE-GKARLVIPRGTFVLGPVTFMGPCNNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVT 161 (439)
Q Consensus 83 t~a~~~A~~~a~~~~-~~~~v~~P~G~y~~~~i~l~g~~~~s~vtl~l~g~l~~~~~~~~~~~~~~~~I~~~~~~nV~I~ 161 (439)
-.-||+||+++.... ..-+|+|.+|+|.= .+.+.- ++.+++|..+|. ....|+
T Consensus 271 f~TIq~Av~a~p~~~~~r~vI~Ik~GvY~E-~V~i~~--~k~~i~l~G~g~-----------------------~~TiIt 324 (572)
T PLN02990 271 YKTINEALNAVPKANQKPFVIYIKQGVYNE-KVDVTK--KMTHVTFIGDGP-----------------------TKTKIT 324 (572)
T ss_pred CcCHHHHHhhCcccCCceEEEEEeCceeEE-EEEecC--CCCcEEEEecCC-----------------------CceEEE
Confidence 456999987654322 33579999999963 344421 156788877652 111111
Q ss_pred cce-EEeCCCCccccccCCCCCCCCCCcCCCceeEEeeeccEEEEeeEEecCCC----eeEEE-eceecEEEEeEEEECC
Q 039959 162 GSG-TFDGQGASCWKYRDTKNDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKG----FHYFI-TGCKNIRLYHLNIIAP 235 (439)
Q Consensus 162 G~G-tIDG~G~~~w~~~~~~~~~~~p~~~~p~~i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~n~~i~~~ 235 (439)
|.- .-+|. |. ..+.. -.....+++..+|++|+|... ..+.+ ...+...+.+|.|..-
T Consensus 325 ~~~~~~~g~----~~------------T~~sa-T~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~ 387 (572)
T PLN02990 325 GSLNFYIGK----VK------------TYLTA-TVAINGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGY 387 (572)
T ss_pred eccccCCCC----cc------------ceeee-EEEEEcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecc
Confidence 110 00010 00 00111 222346788889999988643 12222 3578899999999974
Q ss_pred CCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecC---Cce--EEEeecCCCCCCCCEEEEEEEeE
Q 039959 236 DESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGP---GHG--ISIGSLGKYTDEEDVVGINVRNC 310 (439)
Q Consensus 236 ~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~---~~G--i~igs~g~~~~~~~v~nI~v~n~ 310 (439)
. |-+...+ ..-..++|+|...=|-| + |.-...++||.+.. ..| -.|=--++. +...-..+.|.||
T Consensus 388 Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI-F--G~a~avf~~C~i~~~~~~~~~~~~iTAq~r~-~~~~~~G~vf~~C 457 (572)
T PLN02990 388 Q-----DTLYVHS-HRQFFRDCTVSGTVDFI-F--GDAKVVLQNCNIVVRKPMKGQSCMITAQGRS-DVRESTGLVLQNC 457 (572)
T ss_pred c-----chhccCC-CcEEEEeeEEecccceE-c--cCceEEEEccEEEEecCCCCCceEEEeCCCC-CCCCCceEEEEee
Confidence 4 4444333 45678999999865654 2 34578899998742 111 122111111 2233467899999
Q ss_pred EEeCCcceEE----EEecCCCCCcceeeEEEEeEEEeccCcc
Q 039959 311 TITGTQNGVR----VKTWPGAPASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 311 ~~~~~~~gi~----Iks~~g~~~g~v~nI~f~ni~~~~~~~~ 348 (439)
++.+.....- .+++=|-....-..+.|.+..|.+.=.|
T Consensus 458 ~it~~~~~~~~~~~~~~yLGRpW~~ysrvV~~~s~i~~~I~p 499 (572)
T PLN02990 458 HITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDP 499 (572)
T ss_pred EEecCccccccccccceEeecCCCCCceEEEEecccCCeecc
Confidence 9988642111 1122111234456788888888775333
No 74
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=96.13 E-value=1 Score=44.31 Aligned_cols=134 Identities=16% Similarity=0.204 Sum_probs=70.5
Q ss_pred eeccEEEEeeEEecCCCee---------EEEeceecEEEEeEEEECCCCCCCCCceeeeCc-----------eeEEEEee
Q 039959 198 EVSNAIVRGITSVNSKGFH---------YFITGCKNIRLYHLNIIAPDESPNTDGIHISQS-----------DVVKIAKS 257 (439)
Q Consensus 198 ~~~nv~I~~v~i~ns~~~~---------i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s-----------~nv~I~n~ 257 (439)
.-+++..++++++|.-..+ ......+.+.++|+++....+ -+-...+ -.-.++||
T Consensus 187 ~~ndf~~~nlT~en~~gd~~lagn~~AVaL~~dgDka~frnv~llg~Qd-----TlFv~~~~~~~~~~tn~~~R~yftNs 261 (405)
T COG4677 187 QNNDFQLQNLTIENTLGDGVLAGNHPAVALATDGDKAIFRNVNLLGNQD-----TLFVGNSGVQNRLETNRQPRTYFTNS 261 (405)
T ss_pred ecCCcccccceeecccCCccccCCceeEEEEecCCceeeeeeeEeeccc-----eEEecCCCCccccccCcchhhheecc
Confidence 3445555666666543221 223456788888888886432 2222221 24567888
Q ss_pred EEecCCceEEecCCceeEEEEeeEecC------CceEEE-eecCCCCCCCCEEEEEEEeEEEeCCcc-e-EEEE-ecCCC
Q 039959 258 YIGTGDDCVGMIRGSSNVSVKKVTCGP------GHGISI-GSLGKYTDEEDVVGINVRNCTITGTQN-G-VRVK-TWPGA 327 (439)
Q Consensus 258 ~i~~gDD~i~i~~gs~nV~I~n~~~~~------~~Gi~i-gs~g~~~~~~~v~nI~v~n~~~~~~~~-g-i~Ik-s~~g~ 327 (439)
+|+..-|-| .|+--+++.+|.+.. ..|.-+ -|. -.+.--...+-|+++....+ + +.++ .|..
T Consensus 262 yI~GdvDfI---fGsgtaVFd~c~i~~~d~r~~~~gYIfApST----~~~~~YGflalNsrfna~g~~~s~~LGRpwd~- 333 (405)
T COG4677 262 YIEGDVDFI---FGSGTAVFDNCEIQVVDSRTQQEGYIFAPST----LSGIPYGFLALNSRFNASGDAGSAQLGRPWDV- 333 (405)
T ss_pred eecccceEE---eccceEEeccceEEEeccCCCcceeEeccCC----CCCCceeEEEEeeeeecCCCCCeeeecCcccc-
Confidence 888644433 344456777776621 124222 221 12333566778888877654 2 3332 2321
Q ss_pred CCcceeeEEEEeEEEec
Q 039959 328 PASHASNFMFTDIVMIN 344 (439)
Q Consensus 328 ~~g~v~nI~f~ni~~~~ 344 (439)
.......+.|+|..|..
T Consensus 334 ~a~~nGQvVirds~m~e 350 (405)
T COG4677 334 DANTNGQVVIRDSVMGE 350 (405)
T ss_pred ccccCceEEEEeccccc
Confidence 12345567788777754
No 75
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=95.53 E-value=0.26 Score=48.53 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=58.4
Q ss_pred CCCceeEEeeeccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEe
Q 039959 189 RLPANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGM 268 (439)
Q Consensus 189 ~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i 268 (439)
.|...|++.+..+..|.+-.+..- ..+|..+.+++..+++-+++.- .-|.|...+++..|++...+...-+.++
T Consensus 148 ~rGnGI~vyNa~~a~V~~ndisy~-rDgIy~~~S~~~~~~gnr~~~~-----RygvHyM~t~~s~i~dn~s~~N~vG~AL 221 (408)
T COG3420 148 ERGNGIYVYNAPGALVVGNDISYG-RDGIYSDTSQHNVFKGNRFRDL-----RYGVHYMYTNDSRISDNSSRDNRVGYAL 221 (408)
T ss_pred hccCceEEEcCCCcEEEcCccccc-cceEEEcccccceecccchhhe-----eeeEEEEeccCcEeecccccCCcceEEE
Confidence 455567777777777666555322 2456666666666666665542 2366777777777777776666666666
Q ss_pred cCCceeEEEEeeEecC--CceEEE
Q 039959 269 IRGSSNVSVKKVTCGP--GHGISI 290 (439)
Q Consensus 269 ~~gs~nV~I~n~~~~~--~~Gi~i 290 (439)
-. ++.++|+++...+ .||+-+
T Consensus 222 My-s~~l~V~~nrS~Gnrd~Gill 244 (408)
T COG3420 222 MY-SDRLKVSDNRSSGNRDHGILL 244 (408)
T ss_pred EE-eccEEEEcCcccCccccceee
Confidence 55 6777777776543 355544
No 76
>PF03211 Pectate_lyase: Pectate lyase; InterPro: IPR004898 Pectate lyase is responsible for the maceration and soft-rotting of plant tissue. It catalyses the eliminative cleavage of pectate to produce oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. Pectate lyase is an extracellular enzyme and is induced by pectin. It is subject to self-catabolite repression, and has been implicated in plant disease. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail []. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization.; GO: 0030570 pectate lyase activity, 0005576 extracellular region; PDB: 3T9G_B 3B90_B 3B8Y_A 3B4N_B 1EE6_A.
Probab=95.17 E-value=0.68 Score=43.24 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=72.1
Q ss_pred cEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEec-CCceEEecCCceeEEEEeeEecCCce--EEEeecCCCCCCC
Q 039959 224 NIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGT-GDDCVGMIRGSSNVSVKKVTCGPGHG--ISIGSLGKYTDEE 300 (439)
Q Consensus 224 nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~-gDD~i~i~~gs~nV~I~n~~~~~~~G--i~igs~g~~~~~~ 300 (439)
..+++|+.|-. +..||||... +-+|+|++... +.|+++++..+..++|.+.-..+... |..-.
T Consensus 62 GatlkNvIiG~----~~~dGIHC~G--~Ctl~NVwwedVcEDA~T~kg~~~~~~I~ggga~~A~DKV~Q~Ng-------- 127 (215)
T PF03211_consen 62 GATLKNVIIGA----NQADGIHCKG--SCTLENVWWEDVCEDAATFKGDGGTVTIIGGGARNASDKVFQHNG-------- 127 (215)
T ss_dssp TEEEEEEEETS----S-TT-EEEES--CEEEEEEEESS-SSESEEEESSEEEEEEESTEEEEEEEEEEEE-S--------
T ss_pred CCEEEEEEEcC----CCcCceEEcC--CEEEEEEEecccceeeeEEcCCCceEEEeCCcccCCCccEEEecC--------
Confidence 55666666643 3458898887 67888888776 88999998855566666654443332 33321
Q ss_pred CEEEEEEEeEEEeCCcceEEEEecCCCC--CcceeeEEEEeEEEeccCccEEEEeeeCCCCCCCCCCCCCceeEEeEEEE
Q 039959 301 DVVGINVRNCTITGTQNGVRVKTWPGAP--ASHASNFMFTDIVMINVSNPIIIDQEYCPSNSCKSTSEPSLVKLSNIHFK 378 (439)
Q Consensus 301 ~v~nI~v~n~~~~~~~~gi~Iks~~g~~--~g~v~nI~f~ni~~~~~~~~i~I~~~y~~~~~~~~~~~~~~~~i~nI~f~ 378 (439)
. -.++|+|.+..+. |-...|..+.. ++.-|+|.+++........-+.|...|.+ ..+|+++.++
T Consensus 128 ~-Gtv~I~nF~a~d~--GKl~RSCGnC~~~~~~~r~v~v~~~~~~~~~~~~giN~N~gD-----------~ati~~~~~~ 193 (215)
T PF03211_consen 128 G-GTVTIKNFYAEDF--GKLYRSCGNCSNNGGPRRHVVVNNVVAGPGNSLVGINRNYGD-----------TATISNSCIK 193 (215)
T ss_dssp S-EEEEEEEEEEEEE--EEEEEE-TTETS----EEEEEEEEEEEEEEEEEEEEEEGGTT-----------TEEEEEEEEE
T ss_pred c-eeEEEEeEEEcCC--CEEEEeCCCCCCCCCcceEEEEeeEEecCCcEEEEEECCCCC-----------eEEEEEEEec
Confidence 1 2466777555543 43344432211 23456777777766544444566666543 3466666666
Q ss_pred e
Q 039959 379 N 379 (439)
Q Consensus 379 n 379 (439)
.
T Consensus 194 ~ 194 (215)
T PF03211_consen 194 G 194 (215)
T ss_dssp E
T ss_pred C
Confidence 5
No 77
>PF03211 Pectate_lyase: Pectate lyase; InterPro: IPR004898 Pectate lyase is responsible for the maceration and soft-rotting of plant tissue. It catalyses the eliminative cleavage of pectate to produce oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. Pectate lyase is an extracellular enzyme and is induced by pectin. It is subject to self-catabolite repression, and has been implicated in plant disease. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail []. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization.; GO: 0030570 pectate lyase activity, 0005576 extracellular region; PDB: 3T9G_B 3B90_B 3B8Y_A 3B4N_B 1EE6_A.
Probab=94.84 E-value=3.2 Score=38.80 Aligned_cols=133 Identities=15% Similarity=0.085 Sum_probs=86.2
Q ss_pred eccEEEEeeEEecCCCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCce-eEEEEeeEEecCCceEEecCCceeEEE
Q 039959 199 VSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSD-VVKIAKSYIGTGDDCVGMIRGSSNVSV 277 (439)
Q Consensus 199 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~-nv~I~n~~i~~gDD~i~i~~gs~nV~I 277 (439)
-+..+|+|+.|-.+...+||-.. +.+|+|+....-. .|.+.+.+.. .++|.+.-.+..+|-|-=..+.-.+.|
T Consensus 60 e~GatlkNvIiG~~~~dGIHC~G--~Ctl~NVwwedVc----EDA~T~kg~~~~~~I~ggga~~A~DKV~Q~Ng~Gtv~I 133 (215)
T PF03211_consen 60 EDGATLKNVIIGANQADGIHCKG--SCTLENVWWEDVC----EDAATFKGDGGTVTIIGGGARNASDKVFQHNGGGTVTI 133 (215)
T ss_dssp ETTEEEEEEEETSS-TT-EEEES--CEEEEEEEESS-S----SESEEEESSEEEEEEESTEEEEEEEEEEEE-SSEEEEE
T ss_pred cCCCEEEEEEEcCCCcCceEEcC--CEEEEEEEecccc----eeeeEEcCCCceEEEeCCcccCCCccEEEecCceeEEE
Confidence 46789999999777778999888 8889999998744 4889998877 888888888888887755556678999
Q ss_pred EeeEecCCceEEEeecCCCCCC-CCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEe
Q 039959 278 KKVTCGPGHGISIGSLGKYTDE-EDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTD 339 (439)
Q Consensus 278 ~n~~~~~~~Gi~igs~g~~~~~-~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~n 339 (439)
+|.+.. ..|--+-|.|.-... +.-+++.+++........-+.|....+ +...++++.+..
T Consensus 134 ~nF~a~-d~GKl~RSCGnC~~~~~~~r~v~v~~~~~~~~~~~~giN~N~g-D~ati~~~~~~~ 194 (215)
T PF03211_consen 134 KNFYAE-DFGKLYRSCGNCSNNGGPRRHVVVNNVVAGPGNSLVGINRNYG-DTATISNSCIKG 194 (215)
T ss_dssp EEEEEE-EEEEEEEE-TTETS----EEEEEEEEEEEEEEEEEEEEEEGGT-TTEEEEEEEEEE
T ss_pred EeEEEc-CCCEEEEeCCCCCCCCCcceEEEEeeEEecCCcEEEEEECCCC-CeEEEEEEEecC
Confidence 996554 335444555543332 244667777766544433345655553 345555555444
No 78
>PF12218 End_N_terminal: N terminal extension of bacteriophage endosialidase; InterPro: IPR024429 This entry represents the N-terminal extension domain of endosialidases which is approximately 70 amino acids in length. The two N-terminal domains (this domain and the beta propeller) assemble in the compact 'cap' whereas the C-terminal domain forms an extended tail-like structure. The very N-terminal part of the 'cap' region (residues 246 to 312) holds the only alpha-helix of the protein and is presumably the residual part of the deleted N-terminal head-binding domain [].; PDB: 3JU4_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=94.19 E-value=0.07 Score=39.07 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=21.7
Q ss_pred CcCCCcccccCCchhHHHHHHHHHHHhhcCCCcEEEEcCcEEEEeeE
Q 039959 68 AKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGPV 114 (439)
Q Consensus 68 a~~dg~~d~~~~~~~t~a~~~A~~~a~~~~~~~~v~~P~G~y~~~~i 114 (439)
|+|||++|| |+||.+|+.+. ..|.+|---.=||.++++
T Consensus 1 A~GDGvtdD------t~A~~a~l~a~---~~g~~IDg~GlTykVs~l 38 (67)
T PF12218_consen 1 AKGDGVTDD------TAAITAALEAS---PVGRKIDGAGLTYKVSSL 38 (67)
T ss_dssp ---CCCCE-------HHHHHHHHHHS----TTS-EE-TT-EEEESS-
T ss_pred CCCccccCc------HHHHHHHHhcc---CCCeEEecCCceEEEeeC
Confidence 789999999 99999997643 344455443337987754
No 79
>PLN02773 pectinesterase
Probab=93.38 E-value=2.2 Score=42.39 Aligned_cols=115 Identities=9% Similarity=0.126 Sum_probs=77.9
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
...++++..+|++|.|...........+. .++.+.+.+|.|....|.+.... ..-.++||++.+.-.+-+|+
T Consensus 98 ~v~a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~QDTL~~~~--gr~yf~~c~IeG~VDFIFG~----- 170 (317)
T PLN02773 98 IVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHY--GKQYLRDCYIEGSVDFIFGN----- 170 (317)
T ss_pred EEECCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeecccceeEeCC--CCEEEEeeEEeecccEEeec-----
Confidence 33568999999999986432222233332 36899999999999888887654 36889999998776777774
Q ss_pred CCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 298 DEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|++|++.....|. |-.........-....|.|++++...
T Consensus 171 -----g~a~Fe~c~i~s~~~g~-ITA~~r~~~~~~~GfvF~~c~it~~~ 213 (317)
T PLN02773 171 -----STALLEHCHIHCKSAGF-ITAQSRKSSQESTGYVFLRCVITGNG 213 (317)
T ss_pred -----cEEEEEeeEEEEccCcE-EECCCCCCCCCCceEEEEccEEecCC
Confidence 34789999998765553 32211000112245889999998754
No 80
>PLN02480 Probable pectinesterase
Probab=91.56 E-value=8.2 Score=38.86 Aligned_cols=113 Identities=10% Similarity=0.096 Sum_probs=75.7
Q ss_pred EeceecEEEEeEEEECCCC-----CCCCCceee-eCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEee
Q 039959 219 ITGCKNIRLYHLNIIAPDE-----SPNTDGIHI-SQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGS 292 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~-----~~n~DGI~i-~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs 292 (439)
....++++++|++|.+... .....++.+ ..++++.+.||.|....|.+-... ..-.++||++.+.-.+-+|.
T Consensus 128 tV~a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~QDTLy~~~--gR~yf~~C~IeG~VDFIFG~ 205 (343)
T PLN02480 128 TVEAPHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTHNTLFDYK--GRHYYHSCYIQGSIDFIFGR 205 (343)
T ss_pred EEECCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEecccceeEeCC--CCEEEEeCEEEeeeeEEccc
Confidence 3345899999999999632 112345555 357899999999999888775443 46788999998766666663
Q ss_pred cCCCCCCCCEEEEEEEeEEEeCCc------ceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 293 LGKYTDEEDVVGINVRNCTITGTQ------NGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 293 ~g~~~~~~~v~nI~v~n~~~~~~~------~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.... .|. |..+... ...-....|.|+++...
T Consensus 206 ----------g~a~fe~C~i~s~~~~~~~~~G~-ITA~~r~-~~~~~GfvF~~C~i~g~ 252 (343)
T PLN02480 206 ----------GRSIFHNCEIFVIADRRVKIYGS-ITAHNRE-SEDNSGFVFIKGKVYGI 252 (343)
T ss_pred ----------eeEEEEccEEEEecCCCCCCceE-EEcCCCC-CCCCCEEEEECCEEccc
Confidence 34679999988642 122 3222111 12335688999998763
No 81
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=90.35 E-value=0.37 Score=32.90 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=17.6
Q ss_pred EEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEe
Q 039959 217 YFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIG 260 (439)
Q Consensus 217 i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~ 260 (439)
|++..+.+.+|++.++.. +.|||++..+.+-+|++..+.
T Consensus 2 I~l~~s~~~~i~~N~i~~-----~~~GI~~~~s~~n~i~~N~~~ 40 (44)
T TIGR03804 2 IYLESSSNNTLENNTASN-----NSYGIYLTDSSNNTLSNNTAS 40 (44)
T ss_pred EEEEecCCCEEECcEEeC-----CCCEEEEEeCCCCEeECCEEE
Confidence 334444444455555443 223555554444444444443
No 82
>PF09251 PhageP22-tail: Salmonella phage P22 tail-spike; InterPro: IPR015331 This entry is represented by the Bacteriophage P22, Gp9, tailspike protein (TSP). The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The TSP C-terminal domain adopts a structure that consists of a single-stranded right-handed beta-helix, which in turn is made of parallel beta-strands and short turns. They are required for recognition of the 0-antigenic repeating units of the cell surface, and for subsequent infection of the bacterial cell by the phage []. ; PDB: 1QA3_A 1QRB_A 2XC1_C 1QA2_A 1TYX_A 2VFQ_A 2VFO_A 1TYU_A 2VFN_A 1QA1_A ....
Probab=90.34 E-value=9.4 Score=39.03 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=31.2
Q ss_pred ceeEEEEeeEec-CC-ceEEEeecCCC---------------CCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceee
Q 039959 272 SSNVSVKKVTCG-PG-HGISIGSLGKY---------------TDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASN 334 (439)
Q Consensus 272 s~nV~I~n~~~~-~~-~Gi~igs~g~~---------------~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~n 334 (439)
+.|+.++++..- +- +|+-+|+-... +...--.|=.|+|+...++. |+.+ |.++++++++|
T Consensus 263 nYnLqF~d~~~i~~~~DG~Dl~aDtg~~~~~dR~~D~~laqYp~~qLPtnHiidNi~~~~~l-GVG~--~~DG~~~yvsn 339 (549)
T PF09251_consen 263 NYNLQFRDSVTISPVWDGFDLGADTGMGPETDRPGDYPLAQYPWHQLPTNHIIDNILVRGSL-GVGI--GMDGKGGYVSN 339 (549)
T ss_dssp EBS-EEEEEEEES-SSESEEE-SS-SSSTTS--TTS--TTTS-TT------EEEEEEEES-S-SESC--EEECCS-EEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccc-eeee--eecCCCceEee
Confidence 467888887643 22 45666653220 01111245567777777765 6555 33455777777
Q ss_pred EEEEeEE
Q 039959 335 FMFTDIV 341 (439)
Q Consensus 335 I~f~ni~ 341 (439)
|+.+++.
T Consensus 340 i~~~d~~ 346 (549)
T PF09251_consen 340 ITVQDCA 346 (549)
T ss_dssp EEEES-S
T ss_pred EEeeccc
Confidence 7666543
No 83
>PF09251 PhageP22-tail: Salmonella phage P22 tail-spike; InterPro: IPR015331 This entry is represented by the Bacteriophage P22, Gp9, tailspike protein (TSP). The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The TSP C-terminal domain adopts a structure that consists of a single-stranded right-handed beta-helix, which in turn is made of parallel beta-strands and short turns. They are required for recognition of the 0-antigenic repeating units of the cell surface, and for subsequent infection of the bacterial cell by the phage []. ; PDB: 1QA3_A 1QRB_A 2XC1_C 1QA2_A 1TYX_A 2VFQ_A 2VFO_A 1TYU_A 2VFN_A 1QA1_A ....
Probab=88.93 E-value=2.3 Score=43.25 Aligned_cols=58 Identities=24% Similarity=0.440 Sum_probs=34.5
Q ss_pred eeEEEEeeEecCCceEEEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 273 SNVSVKKVTCGPGHGISIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 273 ~nV~I~n~~~~~~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
.|=.|+|+....++|+.+|.-| ..+.++||++++|. ..|+.++... =.|.||++-++.
T Consensus 311 tnHiidNi~~~~~lGVG~~~DG---~~~yvsni~~~d~~----g~G~~~~~~~---------~~ftNitvId~N 368 (549)
T PF09251_consen 311 TNHIIDNILVRGSLGVGIGMDG---KGGYVSNITVQDCA----GAGIFIRGTN---------KVFTNITVIDTN 368 (549)
T ss_dssp ---EEEEEEEES-SSESCEEEC---CS-EEEEEEEES-S----SESEEEECCS----------EEEEEEEES-S
T ss_pred hhhhhhhhheeccceeeeeecC---CCceEeeEEeeccc----CCceEEeecC---------CceeeeEEEecc
Confidence 5677888888888888877654 45678888877775 2356665432 357788776654
No 84
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=88.36 E-value=0.78 Score=31.24 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=29.3
Q ss_pred ceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEec
Q 039959 243 GIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCG 283 (439)
Q Consensus 243 GI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~ 283 (439)
||.+..|.+.+|+++.+....|+|.+.. +.+-+|+++++.
T Consensus 1 GI~l~~s~~~~i~~N~i~~~~~GI~~~~-s~~n~i~~N~~~ 40 (44)
T TIGR03804 1 GIYLESSSNNTLENNTASNNSYGIYLTD-SSNNTLSNNTAS 40 (44)
T ss_pred CEEEEecCCCEEECcEEeCCCCEEEEEe-CCCCEeECCEEE
Confidence 6777777788888888888777888877 456666666553
No 85
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=88.02 E-value=6.9 Score=40.38 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=7.9
Q ss_pred ceeEEeEEEEeEEEEe
Q 039959 369 LVKLSNIHFKNISGTY 384 (439)
Q Consensus 369 ~~~i~nI~f~nI~~~~ 384 (439)
...|.|=.|++++++.
T Consensus 272 ~H~I~nNY~~gl~g~~ 287 (425)
T PF14592_consen 272 GHTIYNNYFEGLTGTR 287 (425)
T ss_dssp S-EEES-EEEESSB-T
T ss_pred CcEEEcceeeccccce
Confidence 3466666666666554
No 86
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=86.81 E-value=15 Score=39.16 Aligned_cols=117 Identities=7% Similarity=0.074 Sum_probs=76.6
Q ss_pred EEeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCC
Q 039959 218 FITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKY 296 (439)
Q Consensus 218 ~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~ 296 (439)
.....+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-.+++|++.+.-.+-+|.
T Consensus 308 v~v~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~GyQDTLy~~~--~Rqyy~~C~I~GtVDFIFG~---- 381 (529)
T PLN02170 308 VAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGYQDSLYTHS--KRQFYRETDITGTVDFIFGN---- 381 (529)
T ss_pred EEEEcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEeccCCcceeCC--CCEEEEeeEEccccceeccc----
Confidence 344567899999999986532223333332 36889999999999888877655 34578999998776776764
Q ss_pred CCCCCEEEEEEEeEEEeCCcc---eEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 297 TDEEDVVGINVRNCTITGTQN---GVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 297 ~~~~~v~nI~v~n~~~~~~~~---gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-... .-.|..........-..+.|.|++++...
T Consensus 382 ------a~avFq~C~I~~~~~~~~~g~ITAq~R~~~~~~~Gfvf~~C~it~~~ 428 (529)
T PLN02170 382 ------SAVVFQSCNIAARKPSGDRNYVTAQGRSDPNQNTGISIHNCRITAES 428 (529)
T ss_pred ------ceEEEeccEEEEecCCCCceEEEecCCCCCCCCceEEEEeeEEecCC
Confidence 346788888876421 12232211111233457899999998743
No 87
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=86.63 E-value=6.2 Score=38.97 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=65.4
Q ss_pred eceecEEEEeEEEECCCCCC--CCCceeeeCceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESP--NTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~--n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
...+++.++|++|.+..... .+-.+.+ ..+.+.+.+|.|....|.+-... ....++||++.+.-.+-+|..
T Consensus 84 v~a~~f~~~nit~~Nt~g~~~~qAvAl~~-~~d~~~f~~c~~~g~QDTL~~~~--~r~y~~~c~IeG~vDFIfG~~---- 156 (298)
T PF01095_consen 84 VNADDFTAENITFENTAGPSGGQAVALRV-SGDRAAFYNCRFLGYQDTLYANG--GRQYFKNCYIEGNVDFIFGNG---- 156 (298)
T ss_dssp E-STT-EEEEEEEEEHCSGSG----SEEE-T-TSEEEEEEEEE-STT-EEE-S--SEEEEES-EEEESEEEEEESS----
T ss_pred ccccceeeeeeEEecCCCCcccceeeeee-cCCcEEEEEeEEccccceeeecc--ceeEEEeeEEEecCcEEECCe----
Confidence 34689999999999854211 2223343 35789999999999888887665 367889999987767777742
Q ss_pred CCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 298 DEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
...|+||++.-... +-.|-.........-....|.|++++..
T Consensus 157 ------~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vF~~c~i~~~ 202 (298)
T PF01095_consen 157 ------TAVFENCTIHSRRPGGGQGGYITAQGRTSPSQKSGFVFDNCTITGD 202 (298)
T ss_dssp ------EEEEES-EEEE--SSTSSTEEEEEE---CTTSS-EEEEES-EEEES
T ss_pred ------eEEeeeeEEEEeccccccceeEEeCCccccCCCeEEEEEEeEEecC
Confidence 35688888875321 2233221101112346789999999865
No 88
>PLN02916 pectinesterase family protein
Probab=86.27 E-value=16 Score=38.73 Aligned_cols=116 Identities=7% Similarity=0.018 Sum_probs=76.2
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
....+++..+|++|.|.........+.+. .++...+.+|.|....|-+...++ .-.+++|++.+.-.+-+|.
T Consensus 273 ~v~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~QDTLy~~~~--Rqyy~~C~I~GtVDFIFG~----- 345 (502)
T PLN02916 273 GVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGYQDTLFVHSL--RQFYRDCHIYGTIDFIFGD----- 345 (502)
T ss_pred EEECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccCceeEeCCC--CEEEEecEEecccceeccC-----
Confidence 34457889999999986533333344443 468899999999998888776653 4688999998776777764
Q ss_pred CCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 298 DEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-... .-.|..........-..+.|.|++++...
T Consensus 346 -----a~avFq~C~I~~~~~~~~~~g~ITAq~r~~~~~~tGfvf~~C~it~~~ 393 (502)
T PLN02916 346 -----AAVVFQNCDIFVRRPMDHQGNMITAQGRDDPHENTGISIQHSRVRASP 393 (502)
T ss_pred -----ceEEEecCEEEEecCCCCCcceEEecCCCCCCCCcEEEEEeeEEecCc
Confidence 346788888865321 12232211111233467899999998753
No 89
>PLN02665 pectinesterase family protein
Probab=85.91 E-value=22 Score=36.20 Aligned_cols=117 Identities=14% Similarity=0.088 Sum_probs=76.5
Q ss_pred EEeceecEEEEeEEEECCCCCC-----CCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEe
Q 039959 218 FITGCKNIRLYHLNIIAPDESP-----NTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIG 291 (439)
Q Consensus 218 ~~~~~~nv~i~n~~i~~~~~~~-----n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~ig 291 (439)
....++++..+|++|.|....+ ....+.+. ..+...+.||.|....|.+.... ..-.++||++.+.-.+-+|
T Consensus 149 v~v~a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~gDka~f~~C~f~G~QDTL~~~~--gr~yf~~CyIeG~VDFIFG 226 (366)
T PLN02665 149 LIVESDYFMAANIIIKNSAPRPDGKRKGAQAVAMRISGDKAAFYNCRFIGFQDTLCDDK--GRHFFKDCYIEGTVDFIFG 226 (366)
T ss_pred EEEECCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEcCCcEEEEcceeccccceeEeCC--CCEEEEeeEEeeccceecc
Confidence 3456789999999999964211 11222222 36889999999999888876554 3578899999877667676
Q ss_pred ecCCCCCCCCEEEEEEEeEEEeCCcce-EEEEecCC-CCCcceeeEEEEeEEEeccC
Q 039959 292 SLGKYTDEEDVVGINVRNCTITGTQNG-VRVKTWPG-APASHASNFMFTDIVMINVS 346 (439)
Q Consensus 292 s~g~~~~~~~v~nI~v~n~~~~~~~~g-i~Iks~~g-~~~g~v~nI~f~ni~~~~~~ 346 (439)
. -...|+||++.....+ ...-+.++ .....-....|.|++++...
T Consensus 227 ~----------g~a~fe~C~i~s~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~~ 273 (366)
T PLN02665 227 S----------GKSLYLNTELHVVGDGGLRVITAQARNSEAEDSGFSFVHCKVTGTG 273 (366)
T ss_pred c----------cceeeEccEEEEecCCCcEEEEcCCCCCCCCCceEEEEeeEEecCC
Confidence 4 2356888888865443 22222221 11123356789999998854
No 90
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=85.86 E-value=38 Score=36.24 Aligned_cols=115 Identities=6% Similarity=0.079 Sum_probs=73.9
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
....+++..+|++|.|.........+.+. .++...+.+|.|....|-+...++ .-.+++|++.+.-.+-+|.
T Consensus 301 ~v~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~--Rqyy~~C~IeGtVDFIFG~----- 373 (530)
T PLN02933 301 GVKGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGYQDTLYVHSA--KQFYRECDIYGTIDFIFGN----- 373 (530)
T ss_pred EEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEecccccccCCC--ceEEEeeEEecccceeccC-----
Confidence 34457889999999986532233344443 368899999999998887766553 4588999998776777764
Q ss_pred CCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 298 DEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-... .-.|..........-..+.|.|+++...
T Consensus 374 -----a~avFq~C~i~~~~~~~~~~~~iTAq~r~~~~~~tGfvf~~C~it~~ 420 (530)
T PLN02933 374 -----AAVVFQNCSLYARKPNPNHKIAFTAQSRNQSDQPTGISIISSRILAA 420 (530)
T ss_pred -----ceEEEeccEEEEeccCCCCceEEEecCCCCCCCCceEEEEeeEEecC
Confidence 235688888864321 1123222111112335789999999864
No 91
>PLN02682 pectinesterase family protein
Probab=85.60 E-value=19 Score=36.63 Aligned_cols=114 Identities=7% Similarity=0.034 Sum_probs=75.1
Q ss_pred EeceecEEEEeEEEECCCCC-----CCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEee
Q 039959 219 ITGCKNIRLYHLNIIAPDES-----PNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGS 292 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~-----~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs 292 (439)
....+++..+|++|.|.... .....+.+. ..+...+.+|.|....|.+.... ..-.++||++.+.-.+-+|.
T Consensus 159 ~v~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~--gRqyf~~C~IeG~VDFIFG~ 236 (369)
T PLN02682 159 AVNSPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCKFLGAQDTLYDHL--GRHYFKDCYIEGSVDFIFGN 236 (369)
T ss_pred EEECCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcceEeccccceEECC--CCEEEEeeEEcccccEEecC
Confidence 34567899999999986421 111223332 46899999999999888876554 35789999999776777764
Q ss_pred cCCCCCCCCEEEEEEEeEEEeCCcc--eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 293 LGKYTDEEDVVGINVRNCTITGTQN--GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 293 ~g~~~~~~~v~nI~v~n~~~~~~~~--gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|++|++....+ | .|..........-....|.|++++..
T Consensus 237 ----------g~a~Fe~C~I~s~~~~~G-~ITA~~r~~~~~~~GfvF~~C~itg~ 280 (369)
T PLN02682 237 ----------GLSLYEGCHLHAIARNFG-ALTAQKRQSVLEDTGFSFVNCKVTGS 280 (369)
T ss_pred ----------ceEEEEccEEEEecCCCe-EEecCCCCCCCCCceEEEEeeEecCC
Confidence 346799999875322 3 23221111112235788999999874
No 92
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=85.21 E-value=12 Score=40.09 Aligned_cols=116 Identities=9% Similarity=0.093 Sum_probs=75.6
Q ss_pred EEeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCC
Q 039959 218 FITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKY 296 (439)
Q Consensus 218 ~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~ 296 (439)
.....+++..+|++|.|.....+...+.+. .++.+.+.+|.|....|.+...+ ..-..+||++.+.-.+-+|.
T Consensus 314 ~~v~~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~QDTLy~~~--~rqyy~~C~I~GtVDFIFG~---- 387 (537)
T PLN02506 314 VAVSGRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQDTLYAHS--LRQFYRECEIYGTIDFIFGN---- 387 (537)
T ss_pred EEEEcCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeecccccceecC--CceEEEeeEEecccceEccC----
Confidence 345668899999999986532223334332 36889999999999888876655 34689999998776777764
Q ss_pred CCCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 297 TDEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 297 ~~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-... .-.|..........-..+.|.|++++..
T Consensus 388 ------a~avfq~C~i~~r~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~ 434 (537)
T PLN02506 388 ------GAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSYVLAT 434 (537)
T ss_pred ------ceeEEeccEEEEccCCCCCCceEEccCCCCCCCCcEEEEEcCEEccC
Confidence 236788988875321 1223221111112345688999998763
No 93
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=83.98 E-value=14 Score=40.61 Aligned_cols=113 Identities=9% Similarity=0.086 Sum_probs=75.7
Q ss_pred ceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCCC
Q 039959 221 GCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTDE 299 (439)
Q Consensus 221 ~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~~ 299 (439)
..+++..+|++|.|.........+.+. .++...+.+|.|....|-+.... ..-.+++|++.+.-.+-+|.
T Consensus 335 ~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~------- 405 (670)
T PLN02217 335 VGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQDTLYAHS--HRQFYRDCTISGTIDFLFGD------- 405 (670)
T ss_pred ECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeeccchhccCC--CcEEEEeCEEEEeccEEecC-------
Confidence 357889999999986542233444443 46899999999999888876655 45689999998766676763
Q ss_pred CCEEEEEEEeEEEeCCc----ceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 300 EDVVGINVRNCTITGTQ----NGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 300 ~~v~nI~v~n~~~~~~~----~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-.. ..-.|..........-..+.|.|+++...
T Consensus 406 ---a~avfq~C~I~~r~~~~~~~~~ITAqgr~~~~~~tGfvf~~C~i~~~ 452 (670)
T PLN02217 406 ---AAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGE 452 (670)
T ss_pred ---ceEEEEccEEEEccCCCCCceeEecCCCCCCCCCceEEEEeeEEecC
Confidence 33679999987531 11223221111123346799999999875
No 94
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=83.86 E-value=26 Score=37.33 Aligned_cols=115 Identities=7% Similarity=0.046 Sum_probs=74.4
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
....+++..+|++|.|.........+.+. .++...+.+|.|....|-+....+ .-..++|++.+.-.+-+|.
T Consensus 289 ~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~QDTLy~~~~--Rqyy~~C~I~GtVDFIFG~----- 361 (520)
T PLN02201 289 AVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQDTLYTHTM--RQFYRECRITGTVDFIFGD----- 361 (520)
T ss_pred EEECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeeccCCeeEeCCC--CEEEEeeEEeecccEEecC-----
Confidence 34567888999999986532233344443 368899999999998888776653 4577999998776777764
Q ss_pred CCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 298 DEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++..... .-.|..........-..+.|.|++++..
T Consensus 362 -----a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~Gfvf~~C~it~~ 408 (520)
T PLN02201 362 -----ATAVFQNCQILAKKGLPNQKNTITAQGRKDPNQPTGFSIQFSNISAD 408 (520)
T ss_pred -----ceEEEEccEEEEecCCCCCCceEEecCCCCCCCCcEEEEEeeEEecC
Confidence 346788988875310 1123222111123345688999999764
No 95
>PLN02634 probable pectinesterase
Probab=83.62 E-value=21 Score=36.18 Aligned_cols=112 Identities=7% Similarity=0.037 Sum_probs=72.4
Q ss_pred eecEEEEeEEEECCCCC-----CCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCC
Q 039959 222 CKNIRLYHLNIIAPDES-----PNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGK 295 (439)
Q Consensus 222 ~~nv~i~n~~i~~~~~~-----~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~ 295 (439)
.+++..+|++|.|.... .+...+.+. ..+...+.+|.|....|.+.... ..-.++||++.+.-.+-+|.
T Consensus 148 a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~QDTL~~~~--gR~yf~~CyIeG~VDFIFG~--- 222 (359)
T PLN02634 148 ANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGAQDTLCDDA--GRHYFKECYIEGSIDFIFGN--- 222 (359)
T ss_pred CCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEecccceeeeCC--CCEEEEeeEEcccccEEcCC---
Confidence 46788888888885421 122233332 36889999999999888876544 46889999998776776764
Q ss_pred CCCCCCEEEEEEEeEEEeCCcceEEEEecCC-CCCcceeeEEEEeEEEecc
Q 039959 296 YTDEEDVVGINVRNCTITGTQNGVRVKTWPG-APASHASNFMFTDIVMINV 345 (439)
Q Consensus 296 ~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g-~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.........-+.++ .....-....|.|++++..
T Consensus 223 -------g~a~Fe~C~I~s~~~~~g~ITA~~R~~~~~~~GfvF~~C~vtg~ 266 (359)
T PLN02634 223 -------GRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVTGT 266 (359)
T ss_pred -------ceEEEeccEEEEecCCCcEEEeCCCCCCCCCcEEEEEcCEEcCC
Confidence 235689999876432111222221 1112335689999999864
No 96
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=83.47 E-value=25 Score=37.37 Aligned_cols=141 Identities=15% Similarity=0.097 Sum_probs=76.5
Q ss_pred eeccEEEEeeEEecCCCe----eEE-EeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEecCCceEEecCCc
Q 039959 198 EVSNAIVRGITSVNSKGF----HYF-ITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGTGDDCVGMIRGS 272 (439)
Q Consensus 198 ~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~gDD~i~i~~gs 272 (439)
..+++..+|++|+|.... .+. ....+...+.+|.|..-. |-+.... ..-..++|+|...=|-| + |.
T Consensus 268 ~~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~Q-----DTLy~~~-~rqyy~~C~I~G~vDFI-F--G~ 338 (497)
T PLN02698 268 TGDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGYQ-----DTLYAAA-LRQFYRECDIYGTIDFI-F--GN 338 (497)
T ss_pred ECCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccc-----chheeCC-CcEEEEeeEEEeccceE-e--cc
Confidence 467888888888886431 122 234677888888888643 3444333 24577888888654544 2 33
Q ss_pred eeEEEEeeEecC---Cce--EEEeecCCCCCCCCEEEEEEEeEEEeCCcceEE----EEecCCCCCcceeeEEEEeEEEe
Q 039959 273 SNVSVKKVTCGP---GHG--ISIGSLGKYTDEEDVVGINVRNCTITGTQNGVR----VKTWPGAPASHASNFMFTDIVMI 343 (439)
Q Consensus 273 ~nV~I~n~~~~~---~~G--i~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~----Iks~~g~~~g~v~nI~f~ni~~~ 343 (439)
-...++||++.. ..| -.|=..++. +...-..+.|.||++........ .+++=|-....-..+.|.+..|.
T Consensus 339 a~avf~~C~i~~~~~~~~~~~~iTAq~r~-~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRPW~~ysr~vf~~s~l~ 417 (497)
T PLN02698 339 AAAVFQNCYLFLRRPHGKSYNVILANGRS-DPGQNTGFSLQSCRIRTSSDFSPVKHSYSSYLGRPWKKYSRAIVMESYID 417 (497)
T ss_pred cceeecccEEEEecCCCCCceEEEecCCC-CCCCCceEEEEeeEEecCCcccccccccceeccCCCCCCceEEEEecccC
Confidence 467788887742 111 111111111 22233577888888877542111 12222212344567777777777
Q ss_pred ccCcc
Q 039959 344 NVSNP 348 (439)
Q Consensus 344 ~~~~~ 348 (439)
+.=.|
T Consensus 418 ~~I~p 422 (497)
T PLN02698 418 DAIAE 422 (497)
T ss_pred CcccC
Confidence 65443
No 97
>PLN02432 putative pectinesterase
Probab=83.30 E-value=49 Score=32.60 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=74.1
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|... +....+.+. ..+...+.+|.|....|.+-... ..-.++||++.+.-.+-+|.
T Consensus 91 v~a~~f~a~nlt~~Nt~g-~~~QAvAl~v~gDr~~f~~c~~~G~QDTLy~~~--gr~yf~~c~I~G~VDFIFG~------ 161 (293)
T PLN02432 91 VLASDFVGRFLTIQNTFG-SSGKAVALRVAGDRAAFYGCRILSYQDTLLDDT--GRHYYRNCYIEGATDFICGN------ 161 (293)
T ss_pred EECCCeEEEeeEEEeCCC-CCCceEEEEEcCCcEEEEcceEecccceeEECC--CCEEEEeCEEEecccEEecC------
Confidence 345789999999998643 222333332 46899999999999888876554 35789999998776677764
Q ss_pred CCCEEEEEEEeEEEeCCc--ceEEEEecCCCCCcceeeEEEEeEEEec
Q 039959 299 EEDVVGINVRNCTITGTQ--NGVRVKTWPGAPASHASNFMFTDIVMIN 344 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~--~gi~Iks~~g~~~g~v~nI~f~ni~~~~ 344 (439)
-...|++|++.... .| .|..+.......-....|.|++++.
T Consensus 162 ----g~a~Fe~c~i~s~~~~~g-~itA~~r~~~~~~~Gfvf~~c~itg 204 (293)
T PLN02432 162 ----AASLFEKCHLHSLSPNNG-AITAQQRTSASENTGFTFLGCKLTG 204 (293)
T ss_pred ----ceEEEEeeEEEEecCCCC-eEEecCCCCCCCCceEEEEeeEEcc
Confidence 23678899886532 23 3332221111233468999999985
No 98
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=83.13 E-value=18 Score=38.73 Aligned_cols=113 Identities=9% Similarity=0.135 Sum_probs=72.9
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++.+.+.+|.|....|.+...+ ....+++|++.+.-.+-+|.
T Consensus 314 v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~------ 385 (541)
T PLN02416 314 VSGEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGYQDTLYVHS--FRQFYRECDIYGTIDYIFGN------ 385 (541)
T ss_pred EECCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEecccchhccCC--CceEEEeeEEeeccceeecc------
Confidence 3468899999999986543233333332 36889999999998888776554 35688999998776666764
Q ss_pred CCCEEEEEEEeEEEeCCcc--e--EEEEecCC-CCCcceeeEEEEeEEEecc
Q 039959 299 EEDVVGINVRNCTITGTQN--G--VRVKTWPG-APASHASNFMFTDIVMINV 345 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~--g--i~Iks~~g-~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-... | -.| +.++ .....-..+.|.|++++..
T Consensus 386 ----a~avfq~c~i~~~~~~~~~~~~i-TA~~r~~~~~~~G~vf~~c~i~~~ 432 (541)
T PLN02416 386 ----AAVVFQACNIVSKMPMPGQFTVI-TAQSRDTPDEDTGISIQNCSILAT 432 (541)
T ss_pred ----ceEEEeccEEEEecCCCCCceEE-ECCCCCCCCCCCEEEEEeeEEecC
Confidence 346688888865321 1 122 2221 1112345789999999764
No 99
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=82.82 E-value=22 Score=38.25 Aligned_cols=114 Identities=9% Similarity=0.058 Sum_probs=73.0
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-..+||++.+.-.+-+|.
T Consensus 320 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~------ 391 (548)
T PLN02301 320 AVGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAYQDTLYAHS--LRQFYRDSYITGTVDFIFGN------ 391 (548)
T ss_pred EECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeeccccceecC--CcEEEEeeEEEeccceeccc------
Confidence 3457888999999986432222334332 36889999999999888876655 34588999998776666764
Q ss_pred CCCEEEEEEEeEEEeCCcce----EEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 299 EEDVVGINVRNCTITGTQNG----VRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~g----i~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-.... -.|..........-..+.|.|+++...
T Consensus 392 ----a~avfq~c~i~~~~~~~~~~~~iTAqgr~~~~~~tG~vf~~c~i~~~ 438 (548)
T PLN02301 392 ----AAVVFQNCKIVARKPMAGQKNMVTAQGRTDPNQNTGISIQKCDIIAS 438 (548)
T ss_pred ----ceeEEeccEEEEecCCCCCCceEEecCCCCCCCCCEEEEEeeEEecC
Confidence 3466888888653210 122221111123345789999999864
No 100
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=82.71 E-value=19 Score=38.78 Aligned_cols=115 Identities=6% Similarity=0.070 Sum_probs=74.1
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-.++||++.+.-.+-+|.
T Consensus 342 v~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~--~rq~y~~C~I~GtvDFIFG~------ 413 (565)
T PLN02468 342 VFGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQDTLYAHA--QRQFYRECNIYGTVDFIFGN------ 413 (565)
T ss_pred EECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEeccchhccCC--CceEEEeeEEecccceeecc------
Confidence 3457899999999986532222333332 46889999999999888776655 34568999998776777764
Q ss_pred CCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 299 EEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-... .-.|..........-..+.|.|+++....
T Consensus 414 ----a~avfq~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~ 461 (565)
T PLN02468 414 ----SAVVFQNCNILPRRPMKGQQNTITAQGRTDPNQNTGISIQNCTILPLG 461 (565)
T ss_pred ----ceEEEeccEEEEecCCCCCCceEEecCCCCCCCCceEEEEccEEecCC
Confidence 346788888864311 11232211111233457899999998643
No 101
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=82.70 E-value=31 Score=36.53 Aligned_cols=115 Identities=10% Similarity=0.070 Sum_probs=77.0
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-.+++|++.+.-.+-+|.
T Consensus 281 v~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~GyQDTLy~~~--~RqyyrdC~I~GtVDFIFG~------ 352 (509)
T PLN02488 281 SNGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGYQDALYPHR--DRQFYRECFITGTVDFICGN------ 352 (509)
T ss_pred EEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccCcceeeCC--CCEEEEeeEEeeccceEecc------
Confidence 3457889999999986532233444443 46889999999999888876654 45789999998776777764
Q ss_pred CCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 299 EEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++..... .-.|..........-..+.|.|++++...
T Consensus 353 ----a~avFq~C~I~sr~~~~~~~~~ITAq~R~~~~~~tGfvf~~C~it~~~ 400 (509)
T PLN02488 353 ----AAAVFQFCQIVARQPMMGQSNVITAQSRESKDDNSGFSIQKCNITASS 400 (509)
T ss_pred ----eEEEEEccEEEEecCCCCCCEEEEeCCCCCCCCCcEEEEEeeEEecCC
Confidence 457799999876321 11343221111233456899999998754
No 102
>PRK10123 wcaM putative colanic acid biosynthesis protein; Provisional
Probab=82.30 E-value=5.4 Score=38.71 Aligned_cols=95 Identities=21% Similarity=0.289 Sum_probs=52.0
Q ss_pred ceeeeCceeEEEEeeEEecC----------Cc-eEEecCCceeEEEEeeEecCCceEEEeec---CCCCCCCCEEEEEEE
Q 039959 243 GIHISQSDVVKIAKSYIGTG----------DD-CVGMIRGSSNVSVKKVTCGPGHGISIGSL---GKYTDEEDVVGINVR 308 (439)
Q Consensus 243 GI~i~~s~nv~I~n~~i~~g----------DD-~i~i~~gs~nV~I~n~~~~~~~Gi~igs~---g~~~~~~~v~nI~v~ 308 (439)
=+|++..++..|+|..-.+= |. .++|. ||.|..|.|+.+.++.|+-||-. |.|. .--+|....
T Consensus 261 lvhvengkhfvirnvkaknitpdfskkagidnatvaiy-gcdnfvidni~mvnsagmligygvikg~yl--sipqnfkln 337 (464)
T PRK10123 261 LIHVENGKHFVIRNIKAKNITPDFSKKAGIDNATVAIY-GCDNFVIDNIEMINSAGMLIGYGVIKGKYL--SIPQNFKLN 337 (464)
T ss_pred eEEecCCcEEEEEeeeccccCCCchhhcCCCcceEEEE-cccceEEeccccccccccEEEeeeeeccEe--cccccceec
Confidence 35666667777777665541 11 23443 37888888887777666555421 1111 112455555
Q ss_pred eEEEeCC-----cceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 309 NCTITGT-----QNGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 309 n~~~~~~-----~~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
|+.+.++ .+||.|.+ |...+=|-+.|+.|+..
T Consensus 338 ~i~ldn~~l~yklrgiqiss-----gnatsfvaitn~~mkra 374 (464)
T PRK10123 338 NIQLDNTHLAYKLRGIQISA-----GNAVSFVALTNIEMKRA 374 (464)
T ss_pred eEeecccccceeeeeeEecc-----CCcceEEEEeeeehhhh
Confidence 5555554 46777743 33345556666666544
No 103
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=82.10 E-value=27 Score=37.89 Aligned_cols=114 Identities=10% Similarity=0.037 Sum_probs=72.7
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|-+.... ..-.+++|++.+.-.+-+|.
T Consensus 369 v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~------ 440 (596)
T PLN02745 369 ALGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQDTLYAQT--HRQFYRSCVITGTIDFIFGD------ 440 (596)
T ss_pred EEcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecccccccCC--CcEEEEeeEEEeeccEEecc------
Confidence 3567888899999986432222333332 36889999999998888776554 35688999988766666664
Q ss_pred CCCEEEEEEEeEEEeCCcc----eEEEEecCC-CCCcceeeEEEEeEEEeccC
Q 039959 299 EEDVVGINVRNCTITGTQN----GVRVKTWPG-APASHASNFMFTDIVMINVS 346 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~----gi~Iks~~g-~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-... .-.|. .++ .....-..+.|.|++++...
T Consensus 441 ----a~avf~~C~i~~~~~~~~~~~~iT-Aq~r~~~~~~~Gfvf~~c~i~~~~ 488 (596)
T PLN02745 441 ----AAAIFQNCLIFVRKPLPNQQNTVT-AQGRVDKFETTGIVLQNCRIAPDE 488 (596)
T ss_pred ----eeEEEEecEEEEecCCCCCCceEE-ecCCCCCCCCceEEEEeeEEecCc
Confidence 346788888865310 11232 221 11233467899999998743
No 104
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=82.01 E-value=27 Score=36.18 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=75.7
Q ss_pred EEeceecEEEEeEEEECCCCC----CCCCceeee-CceeEEEEeeEEecCCceEEecCC----------ceeEEEEeeEe
Q 039959 218 FITGCKNIRLYHLNIIAPDES----PNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRG----------SSNVSVKKVTC 282 (439)
Q Consensus 218 ~~~~~~nv~i~n~~i~~~~~~----~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~g----------s~nV~I~n~~~ 282 (439)
.....+++..+|++|.+.... .+...+-+. ..+.+.+.+|.|....|-+-..+. ...-.+++|++
T Consensus 201 v~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDra~fy~C~flG~QDTLy~~~~~~~~~~~~~~~gRqYf~~CyI 280 (422)
T PRK10531 201 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKVQIENVNILGRQDTFFVTNSGVQNRLETDRQPRTYVKNSYI 280 (422)
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCcEEEEeeEEecccceeeeccccccccccccccccEEEEeCEE
Confidence 345678999999999986431 112223332 468999999999998888776321 22588999999
Q ss_pred cCCceEEEeecCCCCCCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 283 GPGHGISIGSLGKYTDEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 283 ~~~~Gi~igs~g~~~~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
.+.-.+-+|. -...|+||++..... .-.|-. +......-....|.|++++...
T Consensus 281 eG~VDFIFG~----------g~AvFenC~I~s~~~~~~~~g~ITA-~~t~~~~~~GfvF~nCrit~~g 337 (422)
T PRK10531 281 EGDVDFVFGR----------GAVVFDNTEFRVVNSRTQQEAYVFA-PATLPNIYYGFLAINSRFNASG 337 (422)
T ss_pred eecccEEccC----------ceEEEEcCEEEEecCCCCCceEEEe-cCCCCCCCCEEEEECCEEecCC
Confidence 8776676764 246688888876421 122221 1111223356899999998743
No 105
>PLN02304 probable pectinesterase
Probab=81.51 E-value=34 Score=34.93 Aligned_cols=113 Identities=12% Similarity=0.074 Sum_probs=73.1
Q ss_pred eceecEEEEeEEEECCCCC-----CCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeec
Q 039959 220 TGCKNIRLYHLNIIAPDES-----PNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSL 293 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~-----~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~ 293 (439)
...+++..+|++|.|.... .....+.+. .++...+.+|.|....|.+.... ..-.++||++.+.-.+-+|.
T Consensus 159 v~a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~gDra~fy~C~f~G~QDTLy~~~--gR~Yf~~CyIeG~VDFIFG~- 235 (379)
T PLN02304 159 VFASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIAGDQAAFWGCGFFGAQDTLHDDR--GRHYFKDCYIQGSIDFIFGD- 235 (379)
T ss_pred EECCCeEEEeeEEEecCCCCCCCCCCccEEEEEecCCcEEEEeceEecccceeEeCC--CCEEEEeeEEcccccEEecc-
Confidence 3458899999999986421 122233332 46899999999999888876544 35779999999776777764
Q ss_pred CCCCCCCCEEEEEEEeEEEeCCcce---------EEEEecCCCCCcceeeEEEEeEEEec
Q 039959 294 GKYTDEEDVVGINVRNCTITGTQNG---------VRVKTWPGAPASHASNFMFTDIVMIN 344 (439)
Q Consensus 294 g~~~~~~~v~nI~v~n~~~~~~~~g---------i~Iks~~g~~~g~v~nI~f~ni~~~~ 344 (439)
-...|+||++....+. -.|..........-....|.|++++.
T Consensus 236 ---------g~A~Fe~C~I~s~~~~~~~g~~~~~G~ITA~~Rt~~~~~~GfvF~~C~itg 286 (379)
T PLN02304 236 ---------ARSLYENCRLISMANPVPPGSKSINGAVTAHGRTSKDENTGFSFVNCTIGG 286 (379)
T ss_pred ---------ceEEEEccEEEEecCCcccccccCceEEEecCCCCCCCCceEEEECCEEcc
Confidence 2357899888753211 12322111112233567799999876
No 106
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=81.35 E-value=9.5 Score=38.82 Aligned_cols=86 Identities=13% Similarity=0.200 Sum_probs=62.7
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEec-CCceEEecCCceeEEEEeeEecCCc-eEEEeecCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGT-GDDCVGMIRGSSNVSVKKVTCGPGH-GISIGSLGKY 296 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~-gDD~i~i~~gs~nV~I~n~~~~~~~-Gi~igs~g~~ 296 (439)
+.+=.+|++.|+.+...+ ...|+-+.+..++++++|.|.+ ...|+.... ...|+.|+|.+.+ |+.-
T Consensus 117 V~gM~~VtF~ni~F~~~~---~~~g~~f~~~t~~~~hgC~F~gf~g~cl~~~~---~~~VrGC~F~~C~~gi~~------ 184 (386)
T PF01696_consen 117 VVGMEGVTFVNIRFEGRD---TFSGVVFHANTNTLFHGCSFFGFHGTCLESWA---GGEVRGCTFYGCWKGIVS------ 184 (386)
T ss_pred EeeeeeeEEEEEEEecCC---ccceeEEEecceEEEEeeEEecCcceeEEEcC---CcEEeeeEEEEEEEEeec------
Confidence 334468999999999754 2457888889999999999988 445665544 7889999997553 4432
Q ss_pred CCCCCEEEEEEEeEEEeCCcceE
Q 039959 297 TDEEDVVGINVRNCTITGTQNGV 319 (439)
Q Consensus 297 ~~~~~v~nI~v~n~~~~~~~~gi 319 (439)
.+...+.|++|+|....-||
T Consensus 185 ---~~~~~lsVk~C~FekC~igi 204 (386)
T PF01696_consen 185 ---RGKSKLSVKKCVFEKCVIGI 204 (386)
T ss_pred ---CCcceEEeeheeeeheEEEE
Confidence 34467888999988876555
No 107
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=81.22 E-value=28 Score=37.68 Aligned_cols=114 Identities=8% Similarity=0.134 Sum_probs=72.1
Q ss_pred ceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCCC
Q 039959 221 GCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTDE 299 (439)
Q Consensus 221 ~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~~ 299 (439)
..+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-.+++|++.+.-.+-+|.
T Consensus 345 ~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~------- 415 (572)
T PLN02990 345 NGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGYQDTLYVHS--HRQFFRDCTVSGTVDFIFGD------- 415 (572)
T ss_pred EcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecccchhccCC--CcEEEEeeEEecccceEccC-------
Confidence 457888899999886532223334443 46788899999998888776554 35677999988776666664
Q ss_pred CCEEEEEEEeEEEeCCcc--e--EEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 300 EDVVGINVRNCTITGTQN--G--VRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 300 ~~v~nI~v~n~~~~~~~~--g--i~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-... + -.|..........-..+.|.|++++...
T Consensus 416 ---a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~C~it~~~ 463 (572)
T PLN02990 416 ---AKVVLQNCNIVVRKPMKGQSCMITAQGRSDVRESTGLVLQNCHITGEP 463 (572)
T ss_pred ---ceEEEEccEEEEecCCCCCceEEEeCCCCCCCCCceEEEEeeEEecCc
Confidence 236788888865211 1 2232211011123357899999998754
No 108
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=80.98 E-value=23 Score=38.04 Aligned_cols=113 Identities=10% Similarity=0.066 Sum_probs=70.4
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-.+++|++.+.-.+-+|.
T Consensus 309 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~------ 380 (539)
T PLN02995 309 IEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHS--QRQFYRECYIYGTVDFIFGN------ 380 (539)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEecccchhccCC--CceEEEeeEEeeccceEecc------
Confidence 3457888888888875432223344433 36788888898888777766554 34588888888766666663
Q ss_pred CCCEEEEEEEeEEEeCCcc----eEEEEecCC-CCCcceeeEEEEeEEEecc
Q 039959 299 EEDVVGINVRNCTITGTQN----GVRVKTWPG-APASHASNFMFTDIVMINV 345 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~----gi~Iks~~g-~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++..... .-.|. .++ .....-..+.|.|++++..
T Consensus 381 ----a~avf~~C~i~~~~~~~~~~~~iT-A~~r~~~~~~~G~vf~~c~i~~~ 427 (539)
T PLN02995 381 ----AAAVFQNCIILPRRPLKGQANVIT-AQGRADPFQNTGISIHNSRILPA 427 (539)
T ss_pred ----cceEEeccEEEEecCCCCCcceEe-cCCCCCCCCCceEEEEeeEEecC
Confidence 235688888765321 11232 221 1123346789999999874
No 109
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=80.48 E-value=64 Score=35.07 Aligned_cols=115 Identities=9% Similarity=0.083 Sum_probs=70.8
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...++ .-.+++|++.+.-.+-+|.
T Consensus 359 v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~QDTLy~~~~--rq~y~~c~I~GtvDFIFG~------ 430 (587)
T PLN02313 359 AVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSN--RQFFVKCHITGTVDFIFGN------ 430 (587)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecccchhccCCC--cEEEEeeEEeeccceeccc------
Confidence 3457888888888886432222333332 367888888888887787766552 4478888888766666653
Q ss_pred CCCEEEEEEEeEEEeCCcc--e--EEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 299 EEDVVGINVRNCTITGTQN--G--VRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~~--g--i~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-... | -.|..........-..+.|.|+++....
T Consensus 431 ----a~avfq~c~i~~r~~~~~~~~~iTAqgr~~~~~~tG~v~~~c~i~~~~ 478 (587)
T PLN02313 431 ----AAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTS 478 (587)
T ss_pred ----eeEEEEccEEEEecCCCCCcceEEecCCCCCCCCceEEEEecEEecCC
Confidence 346788888875321 1 1222211111233457889999997643
No 110
>PLN02497 probable pectinesterase
Probab=80.20 E-value=26 Score=35.15 Aligned_cols=114 Identities=12% Similarity=0.069 Sum_probs=73.2
Q ss_pred eceecEEEEeEEEECCCCCC-------CCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEe
Q 039959 220 TGCKNIRLYHLNIIAPDESP-------NTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIG 291 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~-------n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~ig 291 (439)
...+++..+|++|.|....+ ....+.+. ..+...+.+|.|....|.+-... ..-.++||++.+.-.+-+|
T Consensus 112 v~a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~QDTLy~~~--gRqyf~~C~IeG~VDFIFG 189 (331)
T PLN02497 112 TLADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQDTLWDSD--GRHYFKRCTIQGAVDFIFG 189 (331)
T ss_pred EecCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccccceeeCC--CcEEEEeCEEEecccEEcc
Confidence 34578999999999864311 11223322 36889999999999888875544 3578999999877667676
Q ss_pred ecCCCCCCCCEEEEEEEeEEEeCCcc------eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 292 SLGKYTDEEDVVGINVRNCTITGTQN------GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 292 s~g~~~~~~~v~nI~v~n~~~~~~~~------gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
. -...|+||++..... .-.|..........-....|.|++++..
T Consensus 190 ~----------g~a~Fe~C~I~s~~~~~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~ 239 (331)
T PLN02497 190 S----------GQSIYESCVIQVLGGQLEPGLAGFITAQGRTNPYDANGFVFKNCLVYGT 239 (331)
T ss_pred C----------ceEEEEccEEEEecCcCCCCCceEEEecCCCCCCCCceEEEEccEEccC
Confidence 4 246789998875321 1223221111122345678999999863
No 111
>PLN02176 putative pectinesterase
Probab=79.77 E-value=38 Score=34.08 Aligned_cols=113 Identities=17% Similarity=0.136 Sum_probs=73.7
Q ss_pred ceecEEEEeEEEECCCCC------CCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeec
Q 039959 221 GCKNIRLYHLNIIAPDES------PNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSL 293 (439)
Q Consensus 221 ~~~nv~i~n~~i~~~~~~------~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~ 293 (439)
.++++..+|++|.|.... .....+.+. ..+...+.+|.|....|.+-... ..-.+++|++.+.-.+-+|.
T Consensus 120 ~a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C~f~G~QDTLy~~~--gRqyf~~CyIeG~VDFIFG~- 196 (340)
T PLN02176 120 YASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDSSFDGFQDTLFDGK--GRHYYKRCVISGGIDFIFGY- 196 (340)
T ss_pred ECCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEccEEecccceeEeCC--cCEEEEecEEEecccEEecC-
Confidence 578999999999986431 112233332 36899999999999888876554 46889999998776676764
Q ss_pred CCCCCCCCEEEEEEEeEEEeCCc-----c--eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 294 GKYTDEEDVVGINVRNCTITGTQ-----N--GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 294 g~~~~~~~v~nI~v~n~~~~~~~-----~--gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.... . .-.|..........-....|.|++++..
T Consensus 197 ---------a~a~Fe~C~I~s~~~~~~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~ 246 (340)
T PLN02176 197 ---------AQSIFEGCTLKLTLGIYPPNEPYGTITAQGRPSPSDKGGFVFKDCTVTGV 246 (340)
T ss_pred ---------ceEEEeccEEEEecccCCCCCCcEEEEeCCCCCCCCCcEEEEECCEEccC
Confidence 34679999987431 1 1122221101112335688999999864
No 112
>PLN02314 pectinesterase
Probab=79.41 E-value=31 Score=37.48 Aligned_cols=113 Identities=10% Similarity=0.121 Sum_probs=72.9
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...++ .-..++|++.+.-.+-+|.
T Consensus 362 v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~QDTLy~~~~--rq~y~~C~I~GtvDFIFG~------ 433 (586)
T PLN02314 362 AAGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSN--RQFYRDCDITGTIDFIFGN------ 433 (586)
T ss_pred EEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEeccchheeCCC--CEEEEeeEEEeccceeccC------
Confidence 3557888999999986432222333332 467888999999988887766553 4588899988766666763
Q ss_pred CCCEEEEEEEeEEEeCCc-----ceEEEEecCC-CCCcceeeEEEEeEEEeccC
Q 039959 299 EEDVVGINVRNCTITGTQ-----NGVRVKTWPG-APASHASNFMFTDIVMINVS 346 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~-----~gi~Iks~~g-~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||.+.-.. .+ .|. .++ .....-..+.|.|++++...
T Consensus 434 ----a~avf~~c~i~~~~~~~~~~~-~iT-A~~r~~~~~~~G~vf~~c~i~~~~ 481 (586)
T PLN02314 434 ----AAVVFQNCNIQPRQPLPNQFN-TIT-AQGKKDPNQNTGISIQRCTISAFG 481 (586)
T ss_pred ----ceeeeeccEEEEecCCCCCCc-eEe-cCCCCCCCCCCEEEEEeeEEecCC
Confidence 34668888886531 12 232 221 11234467899999998754
No 113
>PLN02671 pectinesterase
Probab=78.75 E-value=42 Score=34.08 Aligned_cols=112 Identities=10% Similarity=0.094 Sum_probs=71.1
Q ss_pred ceecEEEEeEEEECCCC----CCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCC
Q 039959 221 GCKNIRLYHLNIIAPDE----SPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGK 295 (439)
Q Consensus 221 ~~~nv~i~n~~i~~~~~----~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~ 295 (439)
..+++..+|++|.|... ......+.+. ..+.+.+.+|.|....|.+-... ..-.++||++.+.-.+-+|.
T Consensus 152 ~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~gDra~f~~c~f~G~QDTLy~~~--gR~yf~~CyIeG~VDFIFG~--- 226 (359)
T PLN02671 152 ESDYFCATGITFENTVVAEPGGQGMQAVALRISGDKAFFYKVRVLGAQDTLLDET--GSHYFYQCYIQGSVDFIFGN--- 226 (359)
T ss_pred ECCceEEEeeEEEcCCCCCCCCCCccEEEEEEcCccEEEEcceEeccccccEeCC--CcEEEEecEEEEeccEEecc---
Confidence 34678888888887531 1122233332 36899999999999888876544 35689999998766666764
Q ss_pred CCCCCCEEEEEEEeEEEeCCc--ceEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 296 YTDEEDVVGINVRNCTITGTQ--NGVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 296 ~~~~~~v~nI~v~n~~~~~~~--~gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.... .| .|..........-....|.|++++..
T Consensus 227 -------g~A~Fe~C~I~s~~~~~G-~ITA~~r~~~~~~~GfvF~~C~itg~ 270 (359)
T PLN02671 227 -------AKSLYQDCVIQSTAKRSG-AIAAHHRDSPTEDTGFSFVNCVINGT 270 (359)
T ss_pred -------eeEEEeccEEEEecCCCe-EEEeeccCCCCCCccEEEEccEEccC
Confidence 24678999887542 13 23221100112235688999999863
No 114
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=77.89 E-value=67 Score=30.80 Aligned_cols=49 Identities=22% Similarity=0.250 Sum_probs=32.8
Q ss_pred EEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEeeEEec-CCceEE
Q 039959 217 YFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAKSYIGT-GDDCVG 267 (439)
Q Consensus 217 i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n~~i~~-gDD~i~ 267 (439)
+.+....+.+|++++|+++.. ...-|+.+.++ +.+|+||+|.. ..++|.
T Consensus 91 ~tI~~~~~~~i~GvtItN~n~-~~g~Gi~Iess-~~tI~Nntf~~~~~~GI~ 140 (246)
T PF07602_consen 91 VTIILANNATISGVTITNPNI-ARGTGIWIESS-SPTIANNTFTNNGREGIF 140 (246)
T ss_pred EEEEecCCCEEEEEEEEcCCC-CcceEEEEecC-CcEEEeeEEECCccccEE
Confidence 344456788999999999731 23457777776 77777777766 344543
No 115
>PLN02197 pectinesterase
Probab=77.57 E-value=38 Score=36.71 Aligned_cols=114 Identities=11% Similarity=0.105 Sum_probs=76.1
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCCC
Q 039959 220 TGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYTD 298 (439)
Q Consensus 220 ~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~~ 298 (439)
...+++..+|++|.|.........+.+. .++...+.+|.|....|.+...++ .-.+++|++.+.-.+-+|.
T Consensus 361 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQDTLy~~~~--Rqyy~~C~I~GtVDFIFG~------ 432 (588)
T PLN02197 361 VESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNG--RQFYRNIVVSGTVDFIFGK------ 432 (588)
T ss_pred EECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecCcceEecCC--CEEEEeeEEEecccccccc------
Confidence 3457889999999986532233444443 468999999999998888876653 4589999998776666764
Q ss_pred CCCEEEEEEEeEEEeCCc--ce--EEEEecCCCC--CcceeeEEEEeEEEeccC
Q 039959 299 EEDVVGINVRNCTITGTQ--NG--VRVKTWPGAP--ASHASNFMFTDIVMINVS 346 (439)
Q Consensus 299 ~~~v~nI~v~n~~~~~~~--~g--i~Iks~~g~~--~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-.. .| -.| +.++.. ...-..+.|.|++++...
T Consensus 433 ----a~avfq~C~i~~r~~~~~~~~~i-TAqgr~~~~~~~tG~vf~~C~it~~~ 481 (588)
T PLN02197 433 ----SATVIQNSLIVVRKGSKGQYNTV-TADGNEKGLAMKIGIVLQNCRIVPDK 481 (588)
T ss_pred ----eeeeeecCEEEEecCCCCCceeE-ECCCCCCCCCCCcEEEEEccEEecCC
Confidence 23679999886421 11 123 333211 133457899999998743
No 116
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=76.93 E-value=82 Score=34.00 Aligned_cols=115 Identities=12% Similarity=0.121 Sum_probs=77.3
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
....+++..+|++|.|.........+.+. .++.+.+.||.|....|.+-..+ ....+++|++.+.-.+-+|.
T Consensus 326 ~v~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~--~rq~y~~C~I~GtVDFIFG~----- 398 (553)
T PLN02708 326 GVLGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHS--LRQFYKSCRIQGNVDFIFGN----- 398 (553)
T ss_pred EEEcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeeccccceeCC--CceEEEeeEEeecCCEEecC-----
Confidence 34567999999999997542223444443 46899999999999888887665 34578999999777777764
Q ss_pred CCCCEEEEEEEeEEEeCC------cce--EEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 298 DEEDVVGINVRNCTITGT------QNG--VRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~------~~g--i~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-. ..| -.|..........-..+.|.|++++..
T Consensus 399 -----a~avfq~c~i~~~~~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~C~it~~ 449 (553)
T PLN02708 399 -----SAAVFQDCAILIAPRQLKPEKGENNAVTAHGRTDPAQSTGFVFQNCLINGT 449 (553)
T ss_pred -----ceEEEEccEEEEeccccCCCCCCceEEEeCCCCCCCCCceEEEEccEEecC
Confidence 3477999998732 111 123221111123345789999999764
No 117
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=74.76 E-value=96 Score=32.99 Aligned_cols=116 Identities=9% Similarity=0.029 Sum_probs=76.9
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
....+++..+|++|.|.........+.+. .++...+.+|.|....|.+....+ .-.+++|++.+.-.+-+|.
T Consensus 266 ~v~~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~QDTLy~~~~--rqyy~~C~I~G~vDFIFG~----- 338 (497)
T PLN02698 266 TITGDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGYQDTLYAAAL--RQFYRECDIYGTIDFIFGN----- 338 (497)
T ss_pred EEECCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecccchheeCCC--cEEEEeeEEEeccceEecc-----
Confidence 34568999999999986532222334432 368999999999998888776653 4588999999776777764
Q ss_pred CCCCEEEEEEEeEEEeCCcc--e--EEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 298 DEEDVVGINVRNCTITGTQN--G--VRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~--g--i~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++..... + -.|..........-..+.|.|++++...
T Consensus 339 -----a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~c~i~~~~ 386 (497)
T PLN02698 339 -----AAAVFQNCYLFLRRPHGKSYNVILANGRSDPGQNTGFSLQSCRIRTSS 386 (497)
T ss_pred -----cceeecccEEEEecCCCCCceEEEecCCCCCCCCceEEEEeeEEecCC
Confidence 235789998875321 1 1232211111234467999999998753
No 118
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=73.76 E-value=30 Score=31.50 Aligned_cols=14 Identities=14% Similarity=0.171 Sum_probs=6.7
Q ss_pred EEEEEEeEEEeCCc
Q 039959 303 VGINVRNCTITGTQ 316 (439)
Q Consensus 303 ~nI~v~n~~~~~~~ 316 (439)
.|.+|||+.|.+..
T Consensus 64 ~ntlIENNVfDG~y 77 (198)
T PF08480_consen 64 YNTLIENNVFDGVY 77 (198)
T ss_pred cccEEEeeeecccc
Confidence 44445555555443
No 119
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=70.48 E-value=79 Score=34.19 Aligned_cols=115 Identities=5% Similarity=0.027 Sum_probs=77.7
Q ss_pred EeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCCC
Q 039959 219 ITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKYT 297 (439)
Q Consensus 219 ~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~~ 297 (439)
....+++..+|++|.|.........+.+. .++...+.+|.|....|-+...+ ..-.+++|++.+.-.+-+|.
T Consensus 336 ~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~----- 408 (566)
T PLN02713 336 AVVGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAYQDTLYTHS--LRQFYRECDIYGTVDFIFGN----- 408 (566)
T ss_pred EEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccCCcceEECC--CCEEEEeeEEecccceeccc-----
Confidence 34558999999999996533333444443 46889999999999888887765 35689999998776777764
Q ss_pred CCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 298 DEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 298 ~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-.+.|+||.+..... .-.|..........-..+.|.|+++...
T Consensus 409 -----a~avfq~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~c~i~~~ 455 (566)
T PLN02713 409 -----AAVVFQNCNLYPRLPMQGQFNTITAQGRTDPNQNTGTSIQNCTIKAA 455 (566)
T ss_pred -----ceEEEeccEEEEecCCCCCcceeeecCCCCCCCCCEEEEEcCEEecC
Confidence 346799999865321 1123221111123346789999999864
No 120
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=64.62 E-value=1.5e+02 Score=32.29 Aligned_cols=117 Identities=8% Similarity=0.089 Sum_probs=78.4
Q ss_pred EEeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCC
Q 039959 218 FITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKY 296 (439)
Q Consensus 218 ~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~ 296 (439)
.....+++..+|++|.|.........+.+. .++...+.+|.|....|.+...+ ..-.+++|++.+.-.+-+|.
T Consensus 355 ~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~QDTLy~~~--~Rqyy~~C~I~GtVDFIFG~---- 428 (587)
T PLN02484 355 FAATGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHS--NRQFFRECDIYGTVDFIFGN---- 428 (587)
T ss_pred EEEEcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEeccCcccccCC--CcEEEEecEEEeccceeccc----
Confidence 344668999999999986542233444443 46899999999999888876655 35689999998776676764
Q ss_pred CCCCCEEEEEEEeEEEeCCc----ceEEEEecCCCCCcceeeEEEEeEEEeccC
Q 039959 297 TDEEDVVGINVRNCTITGTQ----NGVRVKTWPGAPASHASNFMFTDIVMINVS 346 (439)
Q Consensus 297 ~~~~~v~nI~v~n~~~~~~~----~gi~Iks~~g~~~g~v~nI~f~ni~~~~~~ 346 (439)
-...|+||++.-.. ..-.|..........-..+.|.|++++...
T Consensus 429 ------a~avfq~C~i~~~~~~~~~~~~ITAq~r~~~~~~~G~vf~~c~i~~~~ 476 (587)
T PLN02484 429 ------AAVVLQNCSIYARKPMAQQKNTITAQNRKDPNQNTGISIHACRILAAS 476 (587)
T ss_pred ------ceeEEeccEEEEecCCCCCceEEEecCCCCCCCCcEEEEEeeEEecCC
Confidence 34678999987531 112232211111234467999999998643
No 121
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=59.67 E-value=2.4e+02 Score=30.44 Aligned_cols=116 Identities=5% Similarity=0.062 Sum_probs=77.9
Q ss_pred EEeceecEEEEeEEEECCCCCCCCCceeee-CceeEEEEeeEEecCCceEEecCCceeEEEEeeEecCCceEEEeecCCC
Q 039959 218 FITGCKNIRLYHLNIIAPDESPNTDGIHIS-QSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISIGSLGKY 296 (439)
Q Consensus 218 ~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~-~s~nv~I~n~~i~~gDD~i~i~~gs~nV~I~n~~~~~~~Gi~igs~g~~ 296 (439)
.....+++..+|++|.|.........+.+. .++...+.+|.|....|-+...+ ..-..+||++.+.-.+-+|.
T Consensus 308 ~~v~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gyQDTLy~~~--~rq~y~~c~I~GtVDFIFG~---- 381 (538)
T PLN03043 308 FAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQDTLYVHS--LRQFYRECDIYGTVDFIFGN---- 381 (538)
T ss_pred EEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeccCcccccCC--CcEEEEeeEEeeccceEeec----
Confidence 344558999999999986532233444443 46889999999999888877665 35689999999776777774
Q ss_pred CCCCCEEEEEEEeEEEeCCcc----eEEEEecCCCCCcceeeEEEEeEEEecc
Q 039959 297 TDEEDVVGINVRNCTITGTQN----GVRVKTWPGAPASHASNFMFTDIVMINV 345 (439)
Q Consensus 297 ~~~~~v~nI~v~n~~~~~~~~----gi~Iks~~g~~~g~v~nI~f~ni~~~~~ 345 (439)
-...|+||++.-... .-.|..........-..+.|.|+++...
T Consensus 382 ------a~avfq~c~i~~r~~~~~~~~~iTA~~r~~~~~~tG~~~~~c~i~~~ 428 (538)
T PLN03043 382 ------AAAIFQNCNLYARKPMANQKNAFTAQGRTDPNQNTGISIINCTIEAA 428 (538)
T ss_pred ------ceeeeeccEEEEecCCCCCCceEEecCCCCCCCCceEEEEecEEecC
Confidence 346789998866310 1123222111123345789999999864
No 122
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=57.05 E-value=80 Score=28.87 Aligned_cols=78 Identities=18% Similarity=0.285 Sum_probs=48.1
Q ss_pred eeEEEEeeEecCC--ceE-EEeecCCCCCCCCEEEEEEEeEEEeCCcceEEEEecCCC-CCcceeeEEEEeEEEeccCcc
Q 039959 273 SNVSVKKVTCGPG--HGI-SIGSLGKYTDEEDVVGINVRNCTITGTQNGVRVKTWPGA-PASHASNFMFTDIVMINVSNP 348 (439)
Q Consensus 273 ~nV~I~n~~~~~~--~Gi-~igs~g~~~~~~~v~nI~v~n~~~~~~~~gi~Iks~~g~-~~g~v~nI~f~ni~~~~~~~~ 348 (439)
.+|.|-|+++... .|| -+|..+.+ +....+||+|+++.|.++..--.+. |.|+ -.....|-.+||..++++..+
T Consensus 2 ~dIEIYnN~I~~T~g~GIWl~gy~~~y-sk~~a~nVhIhhN~fY~tGtn~~~~-wvGGIv~sGF~ntlIENNVfDG~y~a 79 (198)
T PF08480_consen 2 DDIEIYNNTIYNTYGPGIWLFGYDGSY-SKDSAKNVHIHHNIFYDTGTNPNID-WVGGIVTSGFYNTLIENNVFDGVYHA 79 (198)
T ss_pred CceEEecceeecccCceEEEEecCCCC-CccccccEEEECcEeecCCcCCCCc-eeeeEEeccccccEEEeeeecccccc
Confidence 4678888888654 464 34554444 4455679999999999975322221 1110 012245779999999998765
Q ss_pred EEEE
Q 039959 349 IIID 352 (439)
Q Consensus 349 i~I~ 352 (439)
-.+.
T Consensus 80 ai~~ 83 (198)
T PF08480_consen 80 AIAQ 83 (198)
T ss_pred eEEE
Confidence 4443
No 123
>PTZ00459 mucin-associated surface protein (MASP); Provisional
Probab=51.03 E-value=10 Score=37.39 Aligned_cols=26 Identities=31% Similarity=0.528 Sum_probs=20.0
Q ss_pred ChhhhhHhHHHHHHHHHHHHHHHhhcccccCCc
Q 039959 1 MAIAKRACTSIAAISLLLCYSAVVSCEVTTGEA 33 (439)
Q Consensus 1 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 33 (439)
|+|++. .++||+|+|+++-|. ++|..
T Consensus 1 MaMmMT------GRVLLVCALCVLWCg-~gG~~ 26 (291)
T PTZ00459 1 MAMMMT------GRVLLVCALCVLWCG-AGGRC 26 (291)
T ss_pred Cccchh------chHHHHHHHHHHhcC-CCCCc
Confidence 777666 788888999888887 66643
No 124
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=47.55 E-value=96 Score=25.60 Aligned_cols=13 Identities=15% Similarity=0.250 Sum_probs=6.2
Q ss_pred HHHHHHhhccccc
Q 039959 18 LCYSAVVSCEVTT 30 (439)
Q Consensus 18 l~~~~~~~~~~~~ 30 (439)
++.++|.+|++..
T Consensus 12 ~~~l~LS~~s~~~ 24 (104)
T PRK14864 12 LLTLLLSACSALQ 24 (104)
T ss_pred HHHHHHhhhhhcc
Confidence 3444555665333
No 125
>smart00710 PbH1 Parallel beta-helix repeats. The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel beta strands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, in some homologues, can be recognised from sequence information alone. Conservation of asparagines might be connected with asparagine-ladders that contribute to the stability of the fold. Proteins containing these repeats most often are enzymes with polysaccharide substrates.
Probab=46.92 E-value=20 Score=20.21 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=11.8
Q ss_pred EEEEEeEEEeCCcc-eEEEE
Q 039959 304 GINVRNCTITGTQN-GVRVK 322 (439)
Q Consensus 304 nI~v~n~~~~~~~~-gi~Ik 322 (439)
+++|+++++.+... |+.+.
T Consensus 3 ~~~i~~n~i~~~~~~Gi~i~ 22 (26)
T smart00710 3 NVTIENNTIRNNGGDGIYIG 22 (26)
T ss_pred CEEEECCEEEeCCCCcEEEe
Confidence 46666666666655 66654
No 126
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=42.05 E-value=32 Score=24.15 Aligned_cols=14 Identities=21% Similarity=0.579 Sum_probs=7.1
Q ss_pred HHHHHHHHHHhhcc
Q 039959 14 ISLLLCYSAVVSCE 27 (439)
Q Consensus 14 ~~~~l~~~~~~~~~ 27 (439)
+++++++++++.|.
T Consensus 10 ~~~l~~~~~l~~Cn 23 (48)
T PRK10081 10 FSVLVLSTVLTACN 23 (48)
T ss_pred HHHHHHHHHHhhhh
Confidence 34444444556664
No 127
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=32.09 E-value=1.4e+02 Score=29.80 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=51.0
Q ss_pred eecEEEEeEEEECCCC-C---CCCCceee-eCceeEEEEeeEEecCCceEEecCC----------ceeEEEEeeEecCCc
Q 039959 222 CKNIRLYHLNIIAPDE-S---PNTDGIHI-SQSDVVKIAKSYIGTGDDCVGMIRG----------SSNVSVKKVTCGPGH 286 (439)
Q Consensus 222 ~~nv~i~n~~i~~~~~-~---~n~DGI~i-~~s~nv~I~n~~i~~gDD~i~i~~g----------s~nV~I~n~~~~~~~ 286 (439)
-++...+|+++.+... + .|.-.+.+ ..++.+.++||.+....|-+-.+.+ .-.-.++||++.+.-
T Consensus 188 ~ndf~~~nlT~en~~gd~~lagn~~AVaL~~dgDka~frnv~llg~QdTlFv~~~~~~~~~~tn~~~R~yftNsyI~Gdv 267 (405)
T COG4677 188 NNDFQLQNLTIENTLGDGVLAGNHPAVALATDGDKAIFRNVNLLGNQDTLFVGNSGVQNRLETNRQPRTYFTNSYIEGDV 267 (405)
T ss_pred cCCcccccceeecccCCccccCCceeEEEEecCCceeeeeeeEeeccceEEecCCCCccccccCcchhhheecceecccc
Confidence 3566777788877542 1 12222222 2367888999998887777766653 113356788887655
Q ss_pred eEEEeecCCCCCCCCEEEEEEEeEEEeCC
Q 039959 287 GISIGSLGKYTDEEDVVGINVRNCTITGT 315 (439)
Q Consensus 287 Gi~igs~g~~~~~~~v~nI~v~n~~~~~~ 315 (439)
.+-+|+. -.+|.+|.|.-.
T Consensus 268 DfIfGsg----------taVFd~c~i~~~ 286 (405)
T COG4677 268 DFIFGSG----------TAVFDNCEIQVV 286 (405)
T ss_pred eEEeccc----------eEEeccceEEEe
Confidence 6777652 145777776543
No 128
>COG4704 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.68 E-value=3e+02 Score=23.86 Aligned_cols=31 Identities=10% Similarity=0.170 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhhcCCCcEE-EEcCcEEEEee
Q 039959 83 HMAFVKAFEAACHHEGKARL-VIPRGTFVLGP 113 (439)
Q Consensus 83 t~a~~~A~~~a~~~~~~~~v-~~P~G~y~~~~ 113 (439)
+..||+|--......-..+. -+|||+|-+..
T Consensus 62 ~~~f~ractsit~dpv~~~f~~Lk~G~YAvaa 93 (151)
T COG4704 62 PSRFQRACTSITGDPVSKSFYGLKPGKYAVAA 93 (151)
T ss_pred chHHhhhcccccCCchhheeecCCCccEEEEE
Confidence 66777772111111111222 38999996654
No 129
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=29.41 E-value=1.9e+02 Score=23.94 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=43.1
Q ss_pred eeeccEEEEeeEEecC---CCeeEEEeceecEEEEeEEEECCCCCCCCCceeeeCceeEEEEe-eEEecCCceEE
Q 039959 197 VEVSNAIVRGITSVNS---KGFHYFITGCKNIRLYHLNIIAPDESPNTDGIHISQSDVVKIAK-SYIGTGDDCVG 267 (439)
Q Consensus 197 ~~~~nv~I~~v~i~ns---~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGI~i~~s~nv~I~n-~~i~~gDD~i~ 267 (439)
....+..|.+-.+.+. ..+++++..+.+..+.+-++. .. .. .+|+++..+.+..+.+ ..+....|++.
T Consensus 73 ~~~~~~~i~~N~~~~~~~~~~~Gi~~~~~~~~~~~~N~i~-~~-~~-g~G~~~~~~~~~~~~~~~~~~~~~~Gi~ 144 (146)
T smart00722 73 QNTGKNLIIDNVTINGTEGSGAGIVVTAGSEGLFIGNRII-TN-ND-GDGNYLSDSSGGDLIGNRIYDNGRDGIA 144 (146)
T ss_pred cCccccEEEcceecCCCccceEEEEEECCccceEecCeEE-ee-cC-CCCEEEeCCCCcEEEcceeEecCCCcEe
Confidence 4555666666555554 378888887766655555555 21 12 6889988888888777 55555556553
Done!