Query 039963
Match_columns 578
No_of_seqs 191 out of 1801
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:28:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.3E-96 4E-101 809.0 56.2 508 33-578 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1E-94 3.5E-99 787.2 49.4 461 32-559 64-543 (580)
3 1zpu_A Iron transport multicop 100.0 4.8E-91 1.6E-95 759.2 51.8 475 34-578 1-500 (534)
4 1v10_A Laccase; multicopper bl 100.0 1.6E-91 5.6E-96 762.1 47.6 474 29-578 17-508 (521)
5 3pxl_A Laccase; 4-copper prote 100.0 1.3E-90 4.4E-95 746.9 51.6 469 35-578 3-488 (499)
6 3t6v_A Laccase; beta barrel, o 100.0 2.9E-90 9.9E-95 744.2 50.4 467 36-578 5-488 (495)
7 2q9o_A Laccase-1; multicopper 100.0 1.7E-88 5.8E-93 743.7 49.1 483 30-578 28-540 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 7.6E-88 2.6E-92 730.8 47.0 464 36-578 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 8.9E-82 3.1E-86 673.0 38.2 403 32-559 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.7E-81 1.3E-85 669.0 32.5 404 35-562 18-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 2.3E-78 7.9E-83 658.1 39.3 420 34-562 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 1.9E-77 6.5E-82 650.8 40.6 428 35-560 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 2.7E-77 9.3E-82 639.0 40.7 414 31-560 46-481 (481)
14 3aw5_A Multicopper oxidase; be 100.0 7.3E-77 2.5E-81 634.8 32.6 384 56-559 28-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 2E-75 6.7E-80 652.6 38.5 460 33-561 30-592 (612)
16 3od3_A Blue copper oxidase CUE 100.0 2.6E-75 9E-80 623.2 34.6 425 34-558 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.8E-73 1.3E-77 621.3 43.2 453 33-560 30-591 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 3.5E-53 1.2E-57 494.2 37.0 268 29-319 15-359 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 1.1E-52 3.8E-57 428.4 29.2 270 34-318 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 4.3E-55 1.5E-59 490.9 10.9 238 41-298 53-316 (742)
21 2zwn_A Two-domain type laccase 100.0 4.1E-51 1.4E-55 421.5 31.7 270 34-318 2-279 (339)
22 2dv6_A Nitrite reductase; elec 100.0 5E-49 1.7E-53 422.5 27.6 400 31-563 24-436 (447)
23 1kbv_A ANIA, major outer membr 100.0 2.7E-47 9.2E-52 391.0 27.0 262 31-319 34-310 (327)
24 3gdc_A Multicopper oxidase; be 100.0 4.9E-47 1.7E-51 382.2 28.4 249 32-314 31-286 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 2.3E-46 7.8E-51 436.8 21.4 401 51-563 616-1061(1065)
26 3tas_A Small laccase, multi-co 100.0 1.7E-44 6E-49 367.6 23.6 241 29-318 7-273 (313)
27 3kw8_A Laccase, putative coppe 100.0 1.5E-44 5.2E-49 361.8 22.5 240 30-318 2-267 (276)
28 3t9w_A Small laccase, multi-co 100.0 4.7E-44 1.6E-48 361.6 22.9 241 30-318 24-289 (299)
29 2zoo_A Probable nitrite reduct 100.0 2E-43 6.9E-48 378.1 26.2 265 30-319 23-300 (442)
30 1mzy_A Copper-containing nitri 100.0 1.2E-42 4.1E-47 358.1 26.4 271 30-319 27-321 (333)
31 1oe1_A Dissimilatory copper-co 100.0 3.6E-41 1.2E-45 347.6 27.2 269 31-319 28-321 (336)
32 2bw4_A Copper-containing nitri 100.0 2.9E-41 1E-45 348.9 26.0 270 30-319 33-327 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 3.3E-40 1.1E-44 339.6 22.8 237 32-318 45-308 (343)
34 1sdd_B Coagulation factor V; c 100.0 4.6E-40 1.6E-44 367.6 25.6 264 31-316 2-327 (647)
35 1sdd_A Coagulation factor V; c 100.0 8.1E-42 2.8E-46 347.1 8.1 229 54-315 50-299 (306)
36 2dv6_A Nitrite reductase; elec 100.0 3.1E-38 1.1E-42 338.6 29.3 260 32-319 160-436 (447)
37 2r7e_B Coagulation factor VIII 100.0 6.4E-40 2.2E-44 368.4 9.1 248 31-296 129-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 7.5E-37 2.6E-41 343.1 5.8 217 61-298 448-698 (742)
39 3gdc_A Multicopper oxidase; be 100.0 1.4E-30 4.7E-35 262.1 17.1 233 198-560 55-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 7E-29 2.4E-33 252.7 16.6 248 198-562 23-278 (318)
41 3cg8_A Laccase; oxidoreductase 100.0 8.3E-29 2.8E-33 254.7 16.9 214 217-561 76-307 (343)
42 2zwn_A Two-domain type laccase 100.0 5.2E-28 1.8E-32 249.0 19.9 244 198-561 24-278 (339)
43 3kw8_A Laccase, putative coppe 100.0 4.7E-28 1.6E-32 242.1 17.6 217 217-562 35-267 (276)
44 3t9w_A Small laccase, multi-co 100.0 4.2E-28 1.4E-32 244.9 15.8 218 216-562 56-289 (299)
45 3tas_A Small laccase, multi-co 99.9 2.7E-27 9.4E-32 240.8 18.3 218 216-562 40-273 (313)
46 1sdd_A Coagulation factor V; c 99.9 4.9E-26 1.7E-30 230.9 0.5 236 200-561 52-301 (306)
47 1kbv_A ANIA, major outer membr 99.9 3.4E-22 1.2E-26 204.5 20.4 244 198-562 59-309 (327)
48 1sdd_B Coagulation factor V; c 99.9 1.6E-22 5.5E-27 225.8 18.9 240 217-560 68-327 (647)
49 2bw4_A Copper-containing nitri 99.9 2.3E-21 7.8E-26 199.9 22.8 247 198-563 60-327 (340)
50 1mzy_A Copper-containing nitri 99.9 1.7E-20 5.8E-25 192.7 21.7 93 454-562 225-320 (333)
51 2r7e_B Coagulation factor VIII 99.9 6.4E-23 2.2E-27 230.6 3.3 88 454-559 368-455 (770)
52 2zoo_A Probable nitrite reduct 99.8 8.4E-20 2.9E-24 195.0 19.6 245 198-563 49-300 (442)
53 1oe1_A Dissimilatory copper-co 99.8 1.1E-18 3.7E-23 179.6 24.2 248 198-563 54-321 (336)
54 2uxt_A Protein SUFI, SUFI; oxi 99.7 1.6E-16 5.6E-21 169.3 22.9 248 35-316 152-441 (451)
55 2xu9_A Laccase; oxidoreductase 99.7 1.8E-16 6.1E-21 168.7 21.7 214 51-297 175-426 (439)
56 1v10_A Laccase; multicopper bl 99.7 7.7E-15 2.6E-19 159.2 23.3 251 53-316 191-491 (521)
57 1hfu_A Laccase 1; oxidoreducta 99.6 9.5E-15 3.3E-19 157.9 22.2 270 37-316 143-470 (503)
58 3zx1_A Oxidoreductase, putativ 99.6 2.7E-14 9.4E-19 152.4 20.9 238 36-297 181-467 (481)
59 3t6v_A Laccase; beta barrel, o 99.6 9.8E-14 3.4E-18 149.0 22.6 237 52-296 167-456 (495)
60 1zpu_A Iron transport multicop 99.6 1.8E-13 6E-18 148.8 22.1 238 53-297 167-467 (534)
61 3pxl_A Laccase; 4-copper prote 99.5 4.1E-13 1.4E-17 144.2 23.0 237 52-296 165-456 (499)
62 1aoz_A Ascorbate oxidase; oxid 99.5 2.6E-13 8.8E-18 148.4 21.4 221 66-297 205-511 (552)
63 2q9o_A Laccase-1; multicopper 99.5 1.4E-12 4.6E-17 142.7 26.1 241 53-297 195-507 (559)
64 3od3_A Blue copper oxidase CUE 99.5 2.9E-13 9.8E-18 144.5 20.1 232 52-297 182-476 (488)
65 3aw5_A Multicopper oxidase; be 99.5 4.1E-13 1.4E-17 142.8 20.0 210 52-297 168-435 (448)
66 2g23_A PHS, phenoxazinone synt 99.5 7.1E-13 2.4E-17 145.1 21.8 244 53-315 254-590 (612)
67 2wsd_A Spore coat protein A; o 99.5 1.5E-13 5E-18 149.0 15.6 229 53-315 230-509 (513)
68 3cvb_A Plastocyanin; cupredoxi 99.5 8.4E-15 2.9E-19 123.8 4.2 89 61-153 15-105 (105)
69 3abg_A Bilirubin oxidase; clea 99.5 7.9E-13 2.7E-17 143.4 16.8 241 53-317 201-476 (534)
70 1iby_A Nitrosocyanin; RED copp 99.4 1.1E-12 3.9E-17 112.0 10.9 91 49-153 21-112 (112)
71 2cal_A Rusticyanin; iron respi 99.3 2.6E-12 8.9E-17 115.9 8.5 98 50-152 47-154 (154)
72 3sqr_A Laccase; multicopper ox 99.3 2.8E-10 9.6E-15 123.8 24.2 237 53-296 225-529 (580)
73 3gyr_A PHS, phenoxazinone synt 99.3 1.6E-10 5.4E-15 128.4 20.5 93 198-298 459-578 (612)
74 1fwx_A Nitrous oxide reductase 99.2 2.3E-11 7.7E-16 131.3 11.5 96 49-155 497-594 (595)
75 2ov0_A Amicyanin; beta-sandwic 99.1 1.7E-10 5.7E-15 97.2 10.3 79 59-152 27-105 (105)
76 2aan_A Auracyanin A; cupredoxi 99.1 4.5E-11 1.5E-15 106.2 6.6 95 454-559 35-139 (139)
77 3cvb_A Plastocyanin; cupredoxi 99.1 1.1E-10 3.8E-15 98.2 8.4 86 454-560 19-105 (105)
78 2gim_A Plastocyanin; beta shee 98.9 1.9E-09 6.7E-14 90.7 8.4 83 65-153 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 4.4E-09 1.5E-13 93.2 9.8 88 64-152 34-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 6.5E-09 2.2E-13 87.5 7.9 85 454-560 20-106 (106)
81 4hci_A Cupredoxin 1; structura 98.7 2.7E-08 9.4E-13 82.7 8.9 73 65-152 28-100 (100)
82 3c75_A Amicyanin; copper prote 98.7 3.1E-08 1.1E-12 86.7 9.2 77 61-152 56-132 (132)
83 2plt_A Plastocyanin; electron 98.7 5.2E-08 1.8E-12 80.6 9.0 80 65-152 18-98 (98)
84 1qhq_A Protein (auracyanin); e 98.7 4.5E-08 1.5E-12 86.8 8.7 99 454-559 33-139 (140)
85 1qhq_A Protein (auracyanin); e 98.6 2.2E-07 7.5E-12 82.3 12.1 88 65-153 33-140 (140)
86 1pcs_A Plastocyanin; electron 98.6 1.1E-07 3.8E-12 78.6 8.0 80 65-152 19-98 (98)
87 1pcs_A Plastocyanin; electron 98.6 1.5E-07 5.2E-12 77.8 8.5 79 454-559 19-98 (98)
88 1bxv_A Plastocyanin; copper pr 98.6 1.7E-07 5.7E-12 76.3 8.3 73 65-152 19-91 (91)
89 2plt_A Plastocyanin; electron 98.6 1.7E-07 5.6E-12 77.5 8.0 81 454-559 18-98 (98)
90 1bxv_A Plastocyanin; copper pr 98.5 3E-07 1E-11 74.7 7.8 73 454-559 19-91 (91)
91 1b3i_A PETE protein, protein ( 98.5 3.9E-07 1.3E-11 75.1 8.5 77 65-152 19-97 (97)
92 1kdj_A Plastocyanin; electron 98.5 3.2E-07 1.1E-11 76.4 8.0 77 65-152 17-102 (102)
93 1byp_A Protein (plastocyanin); 98.5 5.2E-07 1.8E-11 74.6 9.1 77 65-152 17-99 (99)
94 1plc_A Plastocyanin; electron 98.5 5.5E-07 1.9E-11 74.5 9.0 77 65-152 17-99 (99)
95 3tu6_A Pseudoazurin (blue copp 98.4 3.7E-07 1.3E-11 78.9 7.4 76 65-155 23-98 (127)
96 3erx_A Pseudoazurin; copper pr 98.4 5.3E-07 1.8E-11 77.5 8.1 75 65-154 21-95 (123)
97 3ef4_A Pseudoazurin, blue copp 98.4 5.4E-07 1.8E-11 77.4 7.9 75 65-154 22-96 (124)
98 1iby_A Nitrosocyanin; RED copp 98.4 8.1E-07 2.8E-11 75.3 9.0 75 454-560 38-112 (112)
99 1b3i_A PETE protein, protein ( 98.4 3.9E-07 1.3E-11 75.1 6.4 79 454-559 19-97 (97)
100 1cuo_A Protein (azurin ISO-2); 98.4 2.3E-06 7.8E-11 74.2 11.0 88 65-153 18-129 (129)
101 1byp_A Protein (plastocyanin); 98.3 1.1E-06 3.8E-11 72.6 8.0 83 454-559 17-99 (99)
102 1id2_A Amicyanin; beta barrel, 98.3 3.5E-06 1.2E-10 70.6 9.8 73 65-152 34-106 (106)
103 4hci_A Cupredoxin 1; structura 98.3 1.9E-06 6.6E-11 71.4 8.1 73 454-559 28-100 (100)
104 3ay2_A Lipid modified azurin p 98.3 2E-06 6.8E-11 77.7 8.6 89 65-153 58-167 (167)
105 1kdj_A Plastocyanin; electron 98.3 1.4E-06 4.7E-11 72.5 6.6 85 454-559 17-102 (102)
106 1iuz_A Plastocyanin; electron 98.2 5.3E-06 1.8E-10 68.4 8.9 77 65-152 18-98 (98)
107 2ccw_A Azurin II, AZN-2; elect 98.2 8.9E-06 3.1E-10 70.4 9.8 87 65-152 18-128 (129)
108 1paz_A Pseudoazurin precursor; 98.1 6.1E-06 2.1E-10 71.0 8.3 75 65-154 21-95 (123)
109 2iaa_C Azurin; quinoprotein, t 98.1 1.1E-05 3.9E-10 69.6 9.9 87 65-152 17-127 (128)
110 1pmy_A Pseudoazurin; electron 98.1 5.2E-06 1.8E-10 71.4 7.5 75 65-154 21-95 (123)
111 1plc_A Plastocyanin; electron 98.1 4.9E-06 1.7E-10 68.7 6.3 83 454-559 17-99 (99)
112 1nwp_A Azurin; electron transp 98.1 1.8E-05 6.1E-10 68.4 10.0 87 65-152 18-128 (128)
113 3sbq_A Nitrous-oxide reductase 98.0 2.1E-05 7.1E-10 83.3 11.4 88 53-154 546-638 (638)
114 2cal_A Rusticyanin; iron respi 98.0 1.6E-05 5.6E-10 71.2 9.1 85 454-559 61-154 (154)
115 2ux6_A Pseudoazurin; type-1 co 98.0 1.7E-05 5.9E-10 68.1 7.8 73 65-154 21-93 (122)
116 2ov0_A Amicyanin; beta-sandwic 97.9 2.5E-05 8.7E-10 65.1 8.3 73 454-559 33-105 (105)
117 1fwx_A Nitrous oxide reductase 97.9 3.8E-05 1.3E-09 83.0 10.5 78 453-560 512-592 (595)
118 3erx_A Pseudoazurin; copper pr 97.4 0.00027 9.1E-09 60.6 7.1 76 454-562 21-96 (123)
119 3fsa_A Azurin; copper, cupredo 97.3 0.0013 4.5E-08 55.9 10.3 84 65-152 18-125 (125)
120 3tu6_A Pseudoazurin (blue copp 97.3 0.00027 9.2E-09 60.9 6.1 76 454-562 23-98 (127)
121 3ef4_A Pseudoazurin, blue copp 97.3 0.0004 1.4E-08 59.4 6.7 76 454-562 22-97 (124)
122 1id2_A Amicyanin; beta barrel, 97.2 0.0013 4.3E-08 54.8 8.3 73 454-559 34-106 (106)
123 1iuz_A Plastocyanin; electron 97.1 0.0015 5E-08 53.5 8.0 81 454-559 18-98 (98)
124 3c75_A Amicyanin; copper prote 97.1 0.0016 5.4E-08 56.5 8.3 73 454-559 60-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.9 0.0054 1.8E-07 53.3 9.9 74 65-153 60-135 (135)
126 1paz_A Pseudoazurin precursor; 96.7 0.0034 1.2E-07 53.7 7.4 38 521-562 59-96 (123)
127 3s8f_B Cytochrome C oxidase su 96.6 0.011 3.7E-07 53.1 10.1 74 65-153 93-168 (168)
128 1pmy_A Pseudoazurin; electron 96.6 0.0035 1.2E-07 53.6 6.4 39 520-562 58-96 (123)
129 3sbq_A Nitrous-oxide reductase 96.4 0.012 4.1E-07 62.6 10.4 79 454-560 558-637 (638)
130 3ay2_A Lipid modified azurin p 96.4 0.012 4E-07 53.0 8.6 93 455-560 59-167 (167)
131 1cuo_A Protein (azurin ISO-2); 96.3 0.024 8.1E-07 48.7 9.9 92 454-560 18-129 (129)
132 2cua_A Protein (CUA); CUA cent 95.9 0.03 1E-06 48.5 8.8 72 455-560 61-135 (135)
133 2ux6_A Pseudoazurin; type-1 co 95.9 0.014 4.6E-07 49.8 6.3 75 454-563 21-95 (122)
134 2ccw_A Azurin II, AZN-2; elect 95.3 0.11 3.7E-06 44.5 9.8 93 454-560 18-129 (129)
135 2iaa_C Azurin; quinoprotein, t 95.0 0.12 4E-06 44.3 9.3 45 515-560 81-128 (128)
136 3fsa_A Azurin; copper, cupredo 94.9 0.13 4.5E-06 43.5 9.1 96 455-559 19-125 (125)
137 1nwp_A Azurin; electron transp 94.8 0.13 4.4E-06 44.0 8.9 99 454-559 18-128 (128)
138 3s8f_B Cytochrome C oxidase su 94.5 0.14 4.6E-06 46.0 8.7 74 455-560 94-168 (168)
139 3isy_A Bsupi, intracellular pr 86.8 5.2 0.00018 33.4 9.9 72 224-296 16-102 (120)
140 3isy_A Bsupi, intracellular pr 77.6 9.8 0.00034 31.7 8.2 37 101-137 59-100 (120)
141 1cyx_A CYOA; electron transpor 70.2 14 0.00048 33.9 7.9 59 219-296 42-100 (205)
142 3hb3_B Cytochrome C oxidase su 62.9 16 0.00055 35.6 7.3 77 453-561 188-265 (298)
143 1yew_A Particulate methane mon 62.1 17 0.00058 36.0 7.2 59 61-125 260-334 (382)
144 1cyx_A CYOA; electron transpor 59.8 18 0.00061 33.1 6.5 74 454-559 41-115 (205)
145 2gsm_B Cytochrome C oxidase su 57.2 34 0.0011 32.7 8.3 75 65-154 171-247 (262)
146 3rfr_A PMOB; membrane, oxidore 56.5 25 0.00086 35.2 7.3 57 61-125 294-366 (419)
147 3hb3_B Cytochrome C oxidase su 55.7 40 0.0014 32.8 8.7 76 65-155 189-266 (298)
148 2gsm_B Cytochrome C oxidase su 54.8 24 0.00082 33.7 6.9 77 453-561 170-247 (262)
149 2xzz_A Protein-glutamine gamma 46.8 26 0.00087 28.2 4.8 53 74-132 23-79 (102)
150 2p9r_A Alpha-2-M, alpha-2-macr 43.7 74 0.0025 25.0 7.3 69 221-295 12-84 (102)
151 1nep_A EPV20, BNPC2, epididyma 43.5 41 0.0014 28.2 5.9 69 56-125 18-94 (130)
152 1v54_B Cytochrome C oxidase po 42.9 35 0.0012 31.7 5.8 76 453-560 139-215 (227)
153 1xwv_A DER F II; beta sheets, 41.2 50 0.0017 27.6 6.0 68 57-125 17-92 (129)
154 1v54_B Cytochrome C oxidase po 38.6 81 0.0028 29.3 7.6 75 65-154 140-216 (227)
155 2r39_A FIXG-related protein; s 35.7 94 0.0032 25.3 6.8 46 227-282 34-81 (118)
156 2c34_A ICP, inhibitor of cyste 29.0 1.9E+02 0.0065 23.5 7.5 67 64-131 14-88 (116)
157 1fft_B Ubiquinol oxidase; elec 27.5 62 0.0021 31.7 4.9 58 219-295 152-209 (315)
158 1jer_A Cucumber stellacyanin; 26.8 77 0.0026 26.9 4.8 69 68-155 31-110 (138)
159 4ubp_B Protein (urease (chain 26.7 1.3E+02 0.0045 24.9 5.8 72 58-131 4-93 (126)
160 4ac7_B Urease subunit beta; hy 26.7 1.3E+02 0.0045 24.9 5.8 72 58-131 4-93 (126)
161 3kmh_A D-lyxose isomerase; cup 24.1 80 0.0027 29.4 4.6 50 65-121 129-184 (246)
162 2f1e_A Protein APAG; APAG prot 23.6 82 0.0028 26.3 4.3 46 76-122 34-85 (127)
163 1fft_B Ubiquinol oxidase; elec 23.1 51 0.0017 32.3 3.3 74 454-559 151-225 (315)
164 2wtp_A ORF131 protein, CZCE; m 22.6 32 0.0011 28.9 1.5 18 219-236 72-89 (131)
165 3kmh_A D-lyxose isomerase; cup 21.5 1.6E+02 0.0054 27.5 6.0 14 265-278 171-184 (246)
166 3e8v_A Possible transglutamina 21.0 2.5E+02 0.0085 21.4 6.1 45 249-293 4-48 (82)
167 2x3c_A Toxic extracellular end 20.9 2.8E+02 0.0095 27.3 8.3 69 225-295 37-127 (343)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.3e-96 Score=808.98 Aligned_cols=508 Identities=30% Similarity=0.584 Sum_probs=405.2
Q ss_pred cceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CceeEEecccccCCCCCCCCCCcccc
Q 039963 33 AEIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ-YNITLHWHGVNLKGNPWADGPEYVTQ 110 (578)
Q Consensus 33 ~~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~~~~ 110 (578)
+++|+|+| +++..+++||..+.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999 99999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHHHHHh
Q 039963 111 CPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAIF 189 (578)
Q Consensus 111 ~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~~ 189 (578)
|+|+||++|+|+|++ +++||||||||...+.. ||+|+|||++++....++ .+|+|++|+++||++.+..+.......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 89999999999988885 999999999987544454 347899999999999887765543322
Q ss_pred cC-CCCCCCceEEEcCcCCCCCCC-------------CCC-----ceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCcee
Q 039963 190 TG-AAPNVSDAFTINGQPGDLYRC-------------SRR-----ETVRFQVEAGETVLLRIINAAMNQELFFGVANHNL 250 (578)
Q Consensus 190 ~g-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~ 250 (578)
.. .....++.++|||+.. ++| +.. ..+.+++++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1113468999999985 333 211 23479999999999999999999999999999999
Q ss_pred EEEeecCcccceeEeeEEEEccCceEEEEEEe-CCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCC
Q 039963 251 TVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTA-DQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSS 329 (578)
Q Consensus 251 ~via~DG~~~~p~~~d~v~l~pger~dv~v~~-~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~ 329 (578)
+||++||.+++|+.++++.|+|||||||+|++ ++.+|+|+|+++... +. .+.....|+|+|.+..... .+
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~------~p 307 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSK------LP 307 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTS------CC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCC------CC
Confidence 99999999999999999999999999999999 455799999998754 21 2345789999998765311 11
Q ss_pred CCCCCCCCCCCCchhhhhhhcccccCC---CCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecC
Q 039963 330 APVFPTLPGFNDTATATAYTAQIRSLH---EVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEF 406 (578)
Q Consensus 330 ~~~~p~~p~~~~~~~~~~~~~~l~~l~---p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~ 406 (578)
....|..|.+++......+. ++.+. +...+.+.++++.+.+.++.. + ..+.|++||++|..
T Consensus 308 ~~~~p~~p~~~~~~~~~~~~--l~~l~~~~~~~~~~~~~~~~~l~~~~~~~-------------~-~~~~w~iNg~s~~~ 371 (552)
T 1aoz_A 308 TSPPPQTPAWDDFDRSKNFT--YRITAAMGSPKPPVKFNRRIFLLNTQNVI-------------N-GYVKWAINDVSLAL 371 (552)
T ss_dssp SSCCCCCCCTTCHHHHHHHH--TTCCBCTTCCCCCSSCSEEEEEEEEEEEE-------------T-TEEEEEETTEEECC
T ss_pred CCCCCCCCcccccccccccc--ccccccCCCCCCCCCCcEEEEEEEeeccC-------------C-CeEEEEECCCccCC
Confidence 12234445455443322221 33332 233456678888777654321 1 25689999999998
Q ss_pred CCcchhhhhhccCCCCcccCCCCCCCC-ccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCC---CCCCCcc
Q 039963 407 PTGNSLMQAYFQDQPGVFTTDFPPVPP-IKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVT---VEDHPMH 482 (578)
Q Consensus 407 p~~~~ll~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~---~~~HP~H 482 (578)
|+. |+|.+.+.+.+|.++.+++..++ ..|+.+.. ..+...+.++.++.++.|++|+|+|+|.+.+. ...||||
T Consensus 372 p~~-P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~H 448 (552)
T 1aoz_A 372 PPT-PYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTP--PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWH 448 (552)
T ss_dssp CSS-CHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSC--CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEE
T ss_pred CCC-CHHHHHhhcCccccccCCCccccccccccccc--cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEE
Confidence 877 66666666667777776654433 12443321 11112345677899999999999999976433 5679999
Q ss_pred ccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 483 LHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 483 lHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
||||+|+||+++.|.|++ .+...+|+.+|+|||||.|++++|++|||+|||||.|+|||||++|++.|||++|.|..
T Consensus 449 LHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-- 525 (552)
T 1aoz_A 449 LHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-- 525 (552)
T ss_dssp ETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG--
T ss_pred EcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc--
Confidence 999999999999999987 44567889999999999999999999999999999999999999999999999998643
Q ss_pred chhcccCCCCCCCCCC
Q 039963 563 EELQAVQSPPLDLPPC 578 (578)
Q Consensus 563 ~~~~~~~~~~~~~~~c 578 (578)
++++.+|.+++.|
T Consensus 526 ---~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 ---EKVGRIPTKALAC 538 (552)
T ss_dssp ---GGCCCCCHHHHSS
T ss_pred ---hhhccCCcchhhh
Confidence 3677789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1e-94 Score=787.23 Aligned_cols=461 Identities=28% Similarity=0.485 Sum_probs=373.5
Q ss_pred ccceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CceeEEecccccCCCCCCCCCCccc
Q 039963 32 HAEIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ-YNITLHWHGVNLKGNPWADGPEYVT 109 (578)
Q Consensus 32 ~~~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~~~ 109 (578)
.+++++|+| +++..+++||+.+++|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+.+.+++|+||+++++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999 99999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCCCCCCCCCCCce-eeeecccccCChHHHHHHH
Q 039963 110 QCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGSSYPFPVPNREI-PILLGEWWDKNPMDVLMQA 187 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~-~l~~~d~~~~~~~~~~~~~ 187 (578)
||+|+||++|+|+|++ .++||||||||...+++ ||+|+|||+++... .+|+|. +|+++||++....+.....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 69999999999988886 99999999987642 358887 8999999999887776655
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC---------CceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCc
Q 039963 188 IFTGAAPNVSDAFTINGQPGDLYRCSR---------RETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTS 258 (578)
Q Consensus 188 ~~~g~~~~~~~~~liNG~~~~~~~~~~---------~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~ 258 (578)
... .+..++.++|||+.. +.|+. ...+.+++++|++|||||||+|....+.|+|+||+|+||++||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 442 245678999999964 44542 34689999999999999999999999999999999999999999
Q ss_pred ccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCC
Q 039963 259 YTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPG 338 (578)
Q Consensus 259 ~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~ 338 (578)
+++|+.+++|.|+|||||||+|++++.+|+|+|++....++..........|||+|.++... .|..+.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~------------~P~~~~ 361 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA------------NPTSVG 361 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC------------CCCCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC------------CCCCCC
Confidence 99999999999999999999999998889999999876555322334468999999875431 111112
Q ss_pred CCCchhhhh-hhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecC-CCcchhhhhh
Q 039963 339 FNDTATATA-YTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEF-PTGNSLMQAY 416 (578)
Q Consensus 339 ~~~~~~~~~-~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~-p~~~~ll~~~ 416 (578)
+.....+.+ ....|.++.+..++...+.++.+.++ .+..+.|++||.+|.. ++.|.|++.
T Consensus 362 ~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~-----------------~~~~~~w~iN~~s~~~~~~~P~L~~~- 423 (580)
T 3sqr_A 362 TTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSA-----------------FTNYFTWTINSSSLLLDWSSPTTLKI- 423 (580)
T ss_dssp CCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE-----------------ESSSEEEEETTBCCCCCTTSCHHHHH-
T ss_pred CCccchhhcccccccccCCCCCCCCccceEEEEEec-----------------cCCceeEEECCEecccCCCCCchhhh-
Confidence 221111111 11235555455555444544444432 2246789999999974 466455543
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEe----eCCCEEEEEEEeCCCCCCCCCCccccCCceEEEE
Q 039963 417 FQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKL----KFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVG 492 (578)
Q Consensus 417 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~ 492 (578)
+. |. .+++ ...+++.+ +.|++|||+|+|.+.. ...||||||||+|+||+
T Consensus 424 ~~---g~--~~~~---------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~ 476 (580)
T 3sqr_A 424 FN---NE--TIFP---------------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVA 476 (580)
T ss_dssp HT---TC--CCCC---------------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEE
T ss_pred hc---CC--ccCC---------------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEe
Confidence 22 21 1221 12234455 4699999999997522 56899999999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEe
Q 039963 493 SGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 493 ~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.|.|.|+++.+...+|+.||++|||+.|+++||++|||++||||.|+|||||++|++.||+++|.++
T Consensus 477 ~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~ 543 (580)
T 3sqr_A 477 QETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVES 543 (580)
T ss_dssp EESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEES
T ss_pred cCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEEC
Confidence 9999999877777899999999999999999999999999999999999999999999999999863
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-91 Score=759.19 Aligned_cols=475 Identities=25% Similarity=0.412 Sum_probs=372.6
Q ss_pred ceeEEEE-EEEeeecCCc-eeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CceeEEecccccCCCCCCCCCCcccc
Q 039963 34 EIQFHEF-IEAKPVKRLC-RTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ-YNITLHWHGVNLKGNPWADGPEYVTQ 110 (578)
Q Consensus 34 ~~~~~~l-~~~~~~~~~g-~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~~~~ 110 (578)
++++|+| +++..+++|| ..+++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 4789999 9999999999 8999999999999999999999999999999998 99999999999998899999999999
Q ss_pred cccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHHHHHh
Q 039963 111 CPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAIF 189 (578)
Q Consensus 111 ~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~~ 189 (578)
|+|+||++|+|+|++.+++||||||||...+.. ||+|+|||+++.. |+ .+|+|++|+++||++....+....+..
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 999999999999998659999999999998885 9999999999863 23 568999999999999988776654432
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEee
Q 039963 190 T---GAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTS 266 (578)
Q Consensus 190 ~---g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 266 (578)
. ......++.++|||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|..++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12234679999999976 7899999999999999999999999999999999999999999999999
Q ss_pred EEEEccCceEEEEEEeCCC-CceeEEEEeecccccc---cCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCC-CCC
Q 039963 267 VIMIAPGQTTNVLLTADQP-PARYYMAARAYNSANV---AFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPG-FND 341 (578)
Q Consensus 267 ~v~l~pger~dv~v~~~~~-~G~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~-~~~ 341 (578)
++.|+|||||||+|++++. .|+|+|++.....+.. ........++|+|.+.... + .+......+. .++
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~--p-----~~~~~~~~~~~~~~ 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL--P-----TQNYVDSIDNFLDD 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB--C-----CCCCCSCSSCSCCG
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC--C-----CCCccccccccccc
Confidence 9999999999999999864 4789999886443211 1224467899999875431 0 0000111111 111
Q ss_pred chhhhhhhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCC
Q 039963 342 TATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQP 421 (578)
Q Consensus 342 ~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~ 421 (578)
..++++.+..++...++++.+.+.+... .++ ...|.+||++|..|+.|.|++....
T Consensus 300 --------~~l~p~~~~~~~~~~~~~~~l~~~~~~~------------~~~-~~~~~iNg~s~~~~~~P~L~~~~~~--- 355 (534)
T 1zpu_A 300 --------FYLQPYEKEAIYGEPDHVITVDVVMDNL------------KNG-VNYAFFNNITYTAPKVPTLMTVLSS--- 355 (534)
T ss_dssp --------GGCCBSSCCCCCCSCSEEEEEEEEEEEC------------TTS-CEEEEETTBCCCCCSSCHHHHHTTS---
T ss_pred --------ccceeCCCCCCCCCCCeEEEEEEEeecc------------CCc-eeEEEECCCcccCCCCCceeeeccc---
Confidence 1234443334445677887777655320 122 2458999999999988666665321
Q ss_pred CcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccC-----
Q 039963 422 GVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFG----- 496 (578)
Q Consensus 422 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g----- 496 (578)
|.+.. . +. ....++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 356 ~~~~~----~-~~-------------~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~ 414 (534)
T 1zpu_A 356 GDQAN----N-SE-------------IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDAL 414 (534)
T ss_dssp GGGTT----C-GG-------------GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGG
T ss_pred CcccC----C-Cc-------------ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccc
Confidence 11110 0 00 0122466889999999999999965 579999999999999999864
Q ss_pred -----CCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcchhcc---c
Q 039963 497 -----NFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQA---V 568 (578)
Q Consensus 497 -----~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~---~ 568 (578)
.|++.. ... .+.+|+|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|. +++..+ +
T Consensus 415 ~G~p~~~~~~~-~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~--~~~~~~~~~~ 490 (534)
T 1zpu_A 415 GEVPHSFDPDN-HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED--PFGIQDAHSQ 490 (534)
T ss_dssp TCCCCCCBTTB-CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC--HHHHHHCGGG
T ss_pred cCcccccCccc-ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC--cccccccccc
Confidence 444331 112 2568999999999999999999999999999999999999999999999864 334444 4
Q ss_pred CCCCCCCCCC
Q 039963 569 QSPPLDLPPC 578 (578)
Q Consensus 569 ~~~~~~~~~c 578 (578)
+.|+...+.|
T Consensus 491 ~~p~~~~~~C 500 (534)
T 1zpu_A 491 QLSENHLEVC 500 (534)
T ss_dssp SCCHHHHHHH
T ss_pred CCChhHhhhh
Confidence 4444444444
No 4
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.6e-91 Score=762.08 Aligned_cols=474 Identities=27% Similarity=0.455 Sum_probs=361.6
Q ss_pred cccccceeEEEE-EEEeeecCCce-eeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-----CceeEEecccccCCCCC
Q 039963 29 SLSHAEIQFHEF-IEAKPVKRLCR-THNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ-----YNITLHWHGVNLKGNPW 101 (578)
Q Consensus 29 ~~a~~~~~~~~l-~~~~~~~~~g~-~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~-----~~~siH~HG~~~~~~~~ 101 (578)
.++.+...+|+| +++..+++||+ .+.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|
T Consensus 17 ~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~ 96 (521)
T 1v10_A 17 SLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTE 96 (521)
T ss_dssp -----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGG
T ss_pred hhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCc
Confidence 455677789999 99999999999 999999999999999999999999999999999 99999999999998899
Q ss_pred CCCCCcccccccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCC-CCCCCCCCCceeeeecccccCC
Q 039963 102 ADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGS-SYPFPVPNREIPILLGEWWDKN 179 (578)
Q Consensus 102 ~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~d~e~~l~~~d~~~~~ 179 (578)
+||+++++||+|.||++++|+|++++++||||||||.+.+.. ||+|+|||+++.+. ..++...++|++|+++||+++.
T Consensus 97 ~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~ 176 (521)
T 1v10_A 97 MDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSL 176 (521)
T ss_dssp GSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSC
T ss_pred cCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCC
Confidence 999999999999999999999997789999999999998885 99999999987532 1223233479999999999987
Q ss_pred hHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCC--CCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecC
Q 039963 180 PMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCS--RRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDT 257 (578)
Q Consensus 180 ~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG 257 (578)
..+... ..+.....+++++|||+.. +.|. ..+.+.+++++|++|||||||+|..+.+.|+|+||+|+||++||
T Consensus 177 ~~~~~~---~~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG 251 (521)
T 1v10_A 177 STVLFP---NPNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDG 251 (521)
T ss_dssp CC----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETT
T ss_pred HHHHhh---ccCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCC
Confidence 665432 1112234578999999975 4554 33458999999999999999999999999999999999999999
Q ss_pred cccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 039963 258 SYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLP 337 (578)
Q Consensus 258 ~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p 337 (578)
.+++|+.++++.|+|||||||+|++++.+|+|+|+++....+. .+......++|+|.+.... .+ ... +.
T Consensus 252 ~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~-~p------~~~-~~-- 320 (521)
T 1v10_A 252 VSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVA-EP------TTS-QN-- 320 (521)
T ss_dssp EEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSC-CC------CCC-CC--
T ss_pred ccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCC-CC------CCC-CC--
Confidence 9999999999999999999999999977799999998754321 1222234699999876531 00 000 00
Q ss_pred CCCCchhhhhhhcccccCCCCCCC-----CccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchh
Q 039963 338 GFNDTATATAYTAQIRSLHEVKVP-----TVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSL 412 (578)
Q Consensus 338 ~~~~~~~~~~~~~~l~~l~p~~~p-----~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l 412 (578)
..... ...+++++.+...| ...+.++.+...+ ++..+.|+|||++|..++.|.|
T Consensus 321 ~~~~~-----~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~----------------~~~~~~~~iNg~~~~~~~~P~l 379 (521)
T 1v10_A 321 SGTAL-----NEANLIPLINPGAPGNPVPGGADINLNLRIGR----------------NATTADFTINGAPFIPPTVPVL 379 (521)
T ss_dssp CSCBC-----CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC----------------CSSSSCCEESSCCCCCCSSCHH
T ss_pred ccccc-----chhhcccCCcccCCCcccCCcceEEEEEEEec----------------CCceeEEEECCCcccCCCCchh
Confidence 00000 01224443222222 2334444333221 2223468999999998888555
Q ss_pred hhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEE
Q 039963 413 MQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVG 492 (578)
Q Consensus 413 l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~ 492 (578)
++.. . |..... ....+++++.++.|++|||+++| .+.||||||||+||||+
T Consensus 380 ~~~~-~---g~~~~~--------------------~~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~ 430 (521)
T 1v10_A 380 LQIL-S---GVTNPN--------------------DLLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVR 430 (521)
T ss_dssp HHHH-H---TCCCGG--------------------GSSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEE
T ss_pred hhhh-c---CCcccc--------------------cCCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEe
Confidence 5442 2 111000 01234678999999999999999 36899999999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceeEEe-CCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcchhcccCCC
Q 039963 493 SGFGNFNPSTDTPKFNLIDPPRRNTIGM-PPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQAVQSP 571 (578)
Q Consensus 493 ~g~g~~~~~~~~~~~~~~~p~~rDTv~v-pp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~ 571 (578)
++.+. .+++.+|+|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.. ++..++..+
T Consensus 431 ~~~~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~--~~~~~~~~~ 500 (521)
T 1v10_A 431 TPGSS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDI--PNIPIANAI 500 (521)
T ss_dssp CTTCS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESG--GGHHHHSCC
T ss_pred cCCCC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECC--cchhhccCC
Confidence 87542 367789999999999 8999999999999999999999999999999999999754 333445444
Q ss_pred C-CCCCCC
Q 039963 572 P-LDLPPC 578 (578)
Q Consensus 572 ~-~~~~~c 578 (578)
| .+.+.|
T Consensus 501 p~~~~~~C 508 (521)
T 1v10_A 501 SPAWDDLC 508 (521)
T ss_dssp CHHHHTHH
T ss_pred ChHHhhhc
Confidence 4 456666
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.3e-90 Score=746.87 Aligned_cols=469 Identities=29% Similarity=0.490 Sum_probs=364.6
Q ss_pred eeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-----ceeEEecccccCCCCCCCCCCcc
Q 039963 35 IQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-----NITLHWHGVNLKGNPWADGPEYV 108 (578)
Q Consensus 35 ~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-----~~siH~HG~~~~~~~~~DG~~~~ 108 (578)
-.+|+| +++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 368999 999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCC-CCCCCCCCCceeeeecccccCChHHHHHH
Q 039963 109 TQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGS-SYPFPVPNREIPILLGEWWDKNPMDVLMQ 186 (578)
Q Consensus 109 ~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~d~e~~l~~~d~~~~~~~~~~~~ 186 (578)
+||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+. ..++...++|++|+++||++.....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 99999999999999998778999999999988885 99999999987642 1123233567899999999876432
Q ss_pred HHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEee
Q 039963 187 AIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTS 266 (578)
Q Consensus 187 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 266 (578)
.+..+..+++++|||+.. ++.+.....+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 233445679999999853 3333445678999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhh
Q 039963 267 VIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATAT 346 (578)
Q Consensus 267 ~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 346 (578)
++.|+|||||||+|++++.+|+|+|++.....+. .+.+....|+|+|.+.... .+ ..+...... .
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~-~p-----------~~~~~~~~~--~ 299 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAV-EP-----------TTNQTTSVK--P 299 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS-CC-----------CCCCCCCSS--B
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCC-CC-----------CCCCCCCCc--c
Confidence 9999999999999999987799999998654332 2223345899999876431 10 000000000 0
Q ss_pred hhhcccccCCCCC-----CCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCC
Q 039963 347 AYTAQIRSLHEVK-----VPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQP 421 (578)
Q Consensus 347 ~~~~~l~~l~p~~-----~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~ 421 (578)
....+|+++.+.. .+..+|+++.+.+.+. + ..|+|||++|..|+.|.|++...
T Consensus 300 ~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~----------------~--~~w~iNg~s~~~~~~P~L~~~~~---- 357 (499)
T 3pxl_A 300 LNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFN----------------G--SNFFINGASFVPPTVPVLLQILS---- 357 (499)
T ss_dssp CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEC----------------S--SCEEETTBCCCCCSSCHHHHHHT----
T ss_pred cccccccccccccCCCcccCCCCcEEEEEEEEec----------------C--cEEEEcCEecCCCCCchhhhhhc----
Confidence 0122355543221 2234666666554431 1 26899999999888866666532
Q ss_pred CcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCC
Q 039963 422 GVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPS 501 (578)
Q Consensus 422 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~ 501 (578)
|..... .......++.++.|++|||+|+|.++.....||||||||+|+||+.+.
T Consensus 358 g~~~~~--------------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g------ 411 (499)
T 3pxl_A 358 GAQTAQ--------------------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG------ 411 (499)
T ss_dssp TCCSTT--------------------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT------
T ss_pred CCcccc--------------------ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC------
Confidence 211100 001234688999999999999964434578899999999999998642
Q ss_pred CCCCCCCCCCCCcceeEEeCC---CcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcchhcccCC-CCCCCCC
Q 039963 502 TDTPKFNLIDPPRRNTIGMPP---GGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQAVQS-PPLDLPP 577 (578)
Q Consensus 502 ~~~~~~~~~~p~~rDTv~vpp---~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~-~~~~~~~ 577 (578)
...+|+.+|++|||+.|++ ++|++|||++||||.|+|||||++|++.||+++|. ++++++.+... |+.....
T Consensus 412 --~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~--e~~~~~~~~~~~p~~~~~~ 487 (499)
T 3pxl_A 412 --STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA--EDTPDVKAVNPVPQAWSDL 487 (499)
T ss_dssp --CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE--ESGGGHHHHSCCCHHHHTH
T ss_pred --CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEE--EChhHhccccCCCHHHHHh
Confidence 3467889999999999997 99999999999999999999999999999999996 44555555433 3333454
Q ss_pred C
Q 039963 578 C 578 (578)
Q Consensus 578 c 578 (578)
|
T Consensus 488 C 488 (499)
T 3pxl_A 488 C 488 (499)
T ss_dssp H
T ss_pred h
Confidence 5
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.9e-90 Score=744.21 Aligned_cols=467 Identities=27% Similarity=0.472 Sum_probs=361.6
Q ss_pred eEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-----ceeEEecccccCCCCCCCCCCccc
Q 039963 36 QFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-----NITLHWHGVNLKGNPWADGPEYVT 109 (578)
Q Consensus 36 ~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-----~~siH~HG~~~~~~~~~DG~~~~~ 109 (578)
.+|+| +++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++|+||+++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 68999 999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCCC-CCCCCCCCceeeeecccccCChHHHHHHH
Q 039963 110 QCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGSS-YPFPVPNREIPILLGEWWDKNPMDVLMQA 187 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~-~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 187 (578)
||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+.. .++...++|++|+++||++......
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999998778999999999988885 999999999876421 2232335678999999999875431
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCC--CCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEe
Q 039963 188 IFTGAAPNVSDAFTINGQPGDLYRCS--RRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFST 265 (578)
Q Consensus 188 ~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~ 265 (578)
.+..+..+++++|||+.. +.|. ....+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.+
T Consensus 161 --~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 233445689999999953 2332 2456899999999999999999999999999999999999999999999999
Q ss_pred eEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhh
Q 039963 266 SVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATA 345 (578)
Q Consensus 266 d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 345 (578)
+++.|+|||||||+|++++.+|+|+|++.....+. .+.+....|+|+|.+.... .| ....+.. ...
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~-~p------~~~~~~~-~~~----- 302 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTA-DP------VTVASTV-HTK----- 302 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS-CC------CCCCCSS-CSS-----
T ss_pred eeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCC-CC------CCCCCCC-Ccc-----
Confidence 99999999999999999987799999998754332 2223345899999876431 11 0000000 000
Q ss_pred hhhhcccccCCCCC-----CCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCC
Q 039963 346 TAYTAQIRSLHEVK-----VPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQ 420 (578)
Q Consensus 346 ~~~~~~l~~l~p~~-----~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~ 420 (578)
.....+|+++.+.. .+..+|+++.+.+++. + ..|+|||++|..|+.|.|++...
T Consensus 303 ~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~----------------~--~~w~iNg~s~~~~~~P~L~~~~~--- 361 (495)
T 3t6v_A 303 CLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA----------------C--GNFVINGVSFTPPTVPVLLQICS--- 361 (495)
T ss_dssp BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE----------------T--TEEEETTBCCCCCSSCHHHHHHT---
T ss_pred ccccccccccccccCCCccCCCCCcEEEEEEEEec----------------C--cEEEEcCEecCCCCCcchhhhhc---
Confidence 00112345543221 2234566665544331 1 26899999999888866666532
Q ss_pred CCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCC
Q 039963 421 PGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNP 500 (578)
Q Consensus 421 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~ 500 (578)
|.+... .......++.++.|++|||+|+|. .....||||||||+|+||+.+.
T Consensus 362 -g~~~~~--------------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g----- 413 (495)
T 3t6v_A 362 -GANTAA--------------------DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS----- 413 (495)
T ss_dssp -TCCSST--------------------TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT-----
T ss_pred -CCcCcc--------------------cccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC-----
Confidence 211100 001234688999999999999841 2467999999999999998642
Q ss_pred CCCCCCCCCCCCCcceeEEeCC-CcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcchhcccCCCC-CCCCCC
Q 039963 501 STDTPKFNLIDPPRRNTIGMPP-GGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQAVQSPP-LDLPPC 578 (578)
Q Consensus 501 ~~~~~~~~~~~p~~rDTv~vpp-~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~~-~~~~~c 578 (578)
...+|+.+|++|||+.|++ |+|++|||++||||.|+|||||++|++.||+++|. +++++..+...+| ....+|
T Consensus 414 ---~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~--e~~~~~~~~~~~p~~~~~~C 488 (495)
T 3t6v_A 414 ---NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFA--EDIPNTASANPVPEAWSNLC 488 (495)
T ss_dssp ---CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEE--ETHHHHHHHCCCCHHHHHHH
T ss_pred ---CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE--EChhHhccccCCCHHHHHHh
Confidence 3457888999999999997 89999999999999999999999999999999997 4455555443333 333444
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.7e-88 Score=743.67 Aligned_cols=483 Identities=26% Similarity=0.439 Sum_probs=365.3
Q ss_pred ccccceeEEEE-EEEee--ecCCcee-eeEEEECCcCCCceEEEecCCEEEEEEEeCC-CCceeEEecccccCCCCCCCC
Q 039963 30 LSHAEIQFHEF-IEAKP--VKRLCRT-HNTVTVNGQFPGPTLQVRDGDTLIITTINRA-QYNITLHWHGVNLKGNPWADG 104 (578)
Q Consensus 30 ~a~~~~~~~~l-~~~~~--~~~~g~~-~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l-~~~~siH~HG~~~~~~~~~DG 104 (578)
.+.+++++|+| +++.. ++++|+. +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++.+++|+||
T Consensus 28 p~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG 107 (559)
T 2q9o_A 28 PDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDG 107 (559)
T ss_dssp CCCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC
T ss_pred CCCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCC
Confidence 34677899999 99988 8999999 9999999999999999999999999999999 689999999999998889999
Q ss_pred CCcccccccCC-CCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCCCCCCCCCCCce-eeeecccccCChH
Q 039963 105 PEYVTQCPIQP-GRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGSSYPFPVPNREI-PILLGEWWDKNPM 181 (578)
Q Consensus 105 ~~~~~~~~i~P-G~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~-~l~~~d~~~~~~~ 181 (578)
+++++||+|.| |++++|+|++ .++||||||||...+.. ||+|+|||++++.. .+|+|. +|+++||++....
T Consensus 108 ~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~ 181 (559)
T 2q9o_A 108 ANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAAD 181 (559)
T ss_dssp CBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHH
T ss_pred CCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHH
Confidence 99999999999 9999999997 78999999999988875 99999999987642 357887 9999999999877
Q ss_pred HHHHHHHhcCCCCCCCceEEEcCcCCCCCCCC-CCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCccc
Q 039963 182 DVLMQAIFTGAAPNVSDAFTINGQPGDLYRCS-RRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYT 260 (578)
Q Consensus 182 ~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~-~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~ 260 (578)
+...... +..+..+++++|||+... .|. .+..+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 182 ~~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 182 DLVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred HHhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 6653322 223446789999999853 343 23457899999999999999999999999999999999999999999
Q ss_pred ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEee--cccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCC
Q 039963 261 KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARA--YNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPG 338 (578)
Q Consensus 261 ~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~ 338 (578)
+|+.++++.|+|||||||+|++++.+|+|+|+... ...+ .........++|+|.+.... .| . .+..+.
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~~~ail~y~~~~~~-~P------~--~~~~~~ 327 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC-GGSLNPHPAAIFHYAGAPGG-LP------T--DEGTPP 327 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTT-CCBSSSCCEEEEEETTSCCS-CC------C--CCCCCC
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEecccccc-CCCCCCceeEEEEECCCCCC-CC------C--CCCCcC
Confidence 99999999999999999999999878999999987 3322 22234456899999875431 01 0 000000
Q ss_pred CCCchhhhhhhcccccCCCCCCCC-----ccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhh
Q 039963 339 FNDTATATAYTAQIRSLHEVKVPT-----VIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLM 413 (578)
Q Consensus 339 ~~~~~~~~~~~~~l~~l~p~~~p~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll 413 (578)
. +.. ..+ ...+.++.+..+|. ..+.++.+..... .+..+.|+|||++|..+...|+|
T Consensus 328 ~-~~~-~~~-~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~iNg~s~~~~~~~P~L 389 (559)
T 2q9o_A 328 V-DHQ-CLD-TLDVRPVVPRSVPVNSFVKRPDNTLPVALDLT---------------GTPLFVWKVNGSDINVDWGKPII 389 (559)
T ss_dssp C-CCT-TCC-CSCCCBSSCCBCCCTTCCCCGGGEEEEEEECS---------------SSSSCEEEETTBCCCCCTTSCHH
T ss_pred C-Ccc-ccc-ccccccCCCCCCCCcccccceeEEEEEEeecC---------------CCceEEEEECCEecccCCCCCcH
Confidence 0 000 000 01223322222221 1123343332210 22356799999999765332544
Q ss_pred hhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeC-CCEEEEEEEeCCC-CCCCCCCccccCCceEEE
Q 039963 414 QAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKF-GSSVQLVWQDTSI-VTVEDHPMHLHGHEFYVV 491 (578)
Q Consensus 414 ~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~l~N~~~-~~~~~HP~HlHG~~F~Vl 491 (578)
.....+. ++|+ .+.+++.++. +++++|+++|... ...+.||||||||+||||
T Consensus 390 ~~~~~g~-----~~~~---------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl 443 (559)
T 2q9o_A 390 DYILTGN-----TSYP---------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVL 443 (559)
T ss_dssp HHHHHTC-----CCCC---------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEE
T ss_pred hHhhcCC-----ccCC---------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEE
Confidence 4333221 1111 1345566654 5777888888431 015789999999999999
Q ss_pred Eecc---------CCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 492 GSGF---------GNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 492 ~~g~---------g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
+++. |.|++..+...+++.+|+|||||.|++++|++|||++||||.|||||||++|++.|||++|.|. +
T Consensus 444 ~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~--~ 521 (559)
T 2q9o_A 444 GRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLER--P 521 (559)
T ss_dssp EESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC--H
T ss_pred ecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEC--c
Confidence 9987 6666533335688899999999999999999999999999999999999999999999999874 3
Q ss_pred chhcccCCC--CC-CCCCC
Q 039963 563 EELQAVQSP--PL-DLPPC 578 (578)
Q Consensus 563 ~~~~~~~~~--~~-~~~~c 578 (578)
++..++..+ |. .++.|
T Consensus 522 ~~~~~~~~~~~p~~~~~~C 540 (559)
T 2q9o_A 522 ADLRQRISQEDEDDFNRVC 540 (559)
T ss_dssp HHHGGGCCHHHHHHHHHHH
T ss_pred chhhhccccCCchhhhhhc
Confidence 445555433 32 44555
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=7.6e-88 Score=730.80 Aligned_cols=464 Identities=30% Similarity=0.543 Sum_probs=358.1
Q ss_pred eEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-----CceeEEecccccCCCCCCCCCCccc
Q 039963 36 QFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ-----YNITLHWHGVNLKGNPWADGPEYVT 109 (578)
Q Consensus 36 ~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~-----~~~siH~HG~~~~~~~~~DG~~~~~ 109 (578)
.+|+| +++..+++||+.+++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 47999 9999999999999999999999 999999999999999999999 9999999999998889999999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCC-CCCCCCCCCceeeeecccccCChHHHHHHH
Q 039963 110 QCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGS-SYPFPVPNREIPILLGEWWDKNPMDVLMQA 187 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 187 (578)
||+|.||++++|+|++++++||||||||.+.+.. ||+|+|||+++.+. ..++...++|++|+++||++....+..
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 9999999999999997789999999999998886 99999999987532 122323347999999999998765421
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCC-CCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEee
Q 039963 188 IFTGAAPNVSDAFTINGQPGDLYRCS-RRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTS 266 (578)
Q Consensus 188 ~~~g~~~~~~~~~liNG~~~~~~~~~-~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 266 (578)
+ ...+++++|||+.. +.|. ....+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13468999999975 5564 33458999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCceEEEEEEeCCCCceeEEEEeecccccc---cCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 039963 267 VIMIAPGQTTNVLLTADQPPARYYMAARAYNSANV---AFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTA 343 (578)
Q Consensus 267 ~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~ 343 (578)
++.|+|||||||+|++++.+|+|+|++.....+.. .+......++|+|.+.... .+ .....+.....+
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-~p-----~~~~~~~~~~l~--- 304 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA-DP-----TTSANPNPAQLN--- 304 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSS-CC-----CCCCCSSCCBCC---
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCC-CC-----CCCCCCccCCCc---
Confidence 99999999999999999778999999987533221 1222234799999876531 00 000011111111
Q ss_pred hhhhhhcccccCCCCCCC-----CccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhcc
Q 039963 344 TATAYTAQIRSLHEVKVP-----TVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQ 418 (578)
Q Consensus 344 ~~~~~~~~l~~l~p~~~p-----~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~ 418 (578)
..+++++.+...| ...+.++.+..++ ++. .|+|||++|..++.|.|++.. .
T Consensus 305 -----~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~----------------~~~--~~~iNg~~~~~~~~P~l~~~~-~ 360 (503)
T 1hfu_A 305 -----EADLHALIDPAAPGIPTPGAADVNLRFQLGF----------------SGG--RFTINGTAYESPSVPTLLQIM-S 360 (503)
T ss_dssp -----GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE----------------ETT--EEEETTBCCCCCSSCHHHHHH-T
T ss_pred -----cccccccCccCCCCcccCCcceEEEEEEeec----------------cCc--eEEECCCccCCCCCcchhhhh-c
Confidence 1224443322222 2334444332221 122 689999999988885555542 1
Q ss_pred CCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCC
Q 039963 419 DQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNF 498 (578)
Q Consensus 419 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~ 498 (578)
|..... ....+++++.++.|++|||+++|.. ..+.||||||||+|+||+++.+.
T Consensus 361 ---g~~~~~--------------------~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~- 414 (503)
T 1hfu_A 361 ---GAQSAN--------------------DLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS- 414 (503)
T ss_dssp ---TCCSGG--------------------GSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC-
T ss_pred ---CCcccc--------------------cCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC-
Confidence 111000 0123467899999999999999532 25799999999999999987542
Q ss_pred CCCCCCCCCCCCCCCcceeEEe-CCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcchhcccCCCC-CCCC
Q 039963 499 NPSTDTPKFNLIDPPRRNTIGM-PPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQAVQSPP-LDLP 576 (578)
Q Consensus 499 ~~~~~~~~~~~~~p~~rDTv~v-pp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~~-~~~~ 576 (578)
.+++.+|+|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.. ++..++.++| .+.+
T Consensus 415 -------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~--~~~~~~~~~p~~~~~ 485 (503)
T 1hfu_A 415 -------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDM--ANTVDANNPPVEWAQ 485 (503)
T ss_dssp -------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECH--HHHHHHCCCCHHHHH
T ss_pred -------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECc--hhhhhccCCChHHhh
Confidence 457789999999999 9999999999999999999999999999999999999743 3344555444 4456
Q ss_pred CC
Q 039963 577 PC 578 (578)
Q Consensus 577 ~c 578 (578)
.|
T Consensus 486 ~C 487 (503)
T 1hfu_A 486 LC 487 (503)
T ss_dssp HH
T ss_pred hc
Confidence 66
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=8.9e-82 Score=673.01 Aligned_cols=403 Identities=23% Similarity=0.366 Sum_probs=320.5
Q ss_pred ccceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccc
Q 039963 32 HAEIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQ 110 (578)
Q Consensus 32 ~~~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~ 110 (578)
.+.+++|+| +++..++++|+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+ ++||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 456789999 9999999999999999999999999999999999999999999999999999999865 799985
Q ss_pred cccCCCCeEEEEEEec-CCCcceeEeccccc----cc-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHH--
Q 039963 111 CPIQPGRSYTYQFTIE-GQEGTLWWHAHSRW----IR-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMD-- 182 (578)
Q Consensus 111 ~~i~PG~~~~y~~~~~-~~~Gt~~YH~h~~~----~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~-- 182 (578)
+.|.||++++|+|+++ +++||||||||.++ +. +||+|+|||+++.+.. +...+++|++|+++||+++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 3599999999999973 48999999999875 33 4999999999875421 11135789999999998865210
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCccc-c
Q 039963 183 VLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYT-K 261 (578)
Q Consensus 183 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~-~ 261 (578)
........| ..+++++|||+.+ |.+++++| +|||||+|+|+.+.+.|+|+||+|+||+.||.++ +
T Consensus 166 ~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~ 231 (439)
T 2xu9_A 166 HTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEE 231 (439)
T ss_dssp CCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred CCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCC
Confidence 000001112 2358999999986 78999999 9999999999999999999999999999999997 8
Q ss_pred eeEeeEEEEccCceEEEEEEeCCCCceeEEEEeeccccccc--------------CCCcceEEEEEeccCCCCCCCCCCC
Q 039963 262 AFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVA--------------FDNTTTTAILAYKSAPCNAKNGGSN 327 (578)
Q Consensus 262 p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~~~ 327 (578)
|+.++++.|+|||||||+|++++ +|+|+|+++....+... .......++++|.+....
T Consensus 232 p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------- 303 (439)
T 2xu9_A 232 PLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP------- 303 (439)
T ss_dssp EEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC-------
T ss_pred ceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc-------
Confidence 99999999999999999999996 89999999865432110 112356889999765421
Q ss_pred CCCCCCCCCCCCCCchhhhhhhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCC
Q 039963 328 SSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFP 407 (578)
Q Consensus 328 ~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p 407 (578)
. .+|.. +.++.+...+ ..++++.+..+.. + ..|.+||++|..+
T Consensus 304 ~---~~p~~---------------l~~~~~l~~~-~~~r~~~l~~~~~----------------g--~~~~iNg~~~~~~ 346 (439)
T 2xu9_A 304 L---PLPKA---------------LSPFPTLPAP-VVTRRLVLTEDMM----------------A--ARFFINGQVFDHR 346 (439)
T ss_dssp C---CCCSC---------------CCCCCCCCCC-SEEEEEEEEEEGG----------------G--TEEEETTBCCCTT
T ss_pred c---cCccc---------------CCCcccCCCC-CcceEEEEEeecc----------------C--ceEeECCEECCCC
Confidence 0 01110 1111111111 1235555554321 1 2589999988633
Q ss_pred CcchhhhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCc
Q 039963 408 TGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHE 487 (578)
Q Consensus 408 ~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~ 487 (578)
+. .+.+++|++|+|+|.|.+ .+.||||||||+
T Consensus 347 ~~---------------------------------------------~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~ 378 (439)
T 2xu9_A 347 RV---------------------------------------------DLKGQAQTVEVWEVENQG---DMDHPFHLHVHP 378 (439)
T ss_dssp CC---------------------------------------------CEEECTTCEEEEEEEECS---SSCEEEEESSCC
T ss_pred CC---------------------------------------------ceecCCCCEEEEEEEcCC---CCCCCceeCCCc
Confidence 22 256799999999999965 579999999999
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEe
Q 039963 488 FYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 488 F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
||||+++.+.+ .+|.|||||.|+|+++++|||++||||.|+|||||++|++.|||++|+|+
T Consensus 379 F~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 379 FQVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp BEEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999975543 26899999999999999999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.7e-81 Score=668.99 Aligned_cols=404 Identities=17% Similarity=0.223 Sum_probs=316.1
Q ss_pred eeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccc
Q 039963 35 IQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCP 112 (578)
Q Consensus 35 ~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~ 112 (578)
.++|+| +++..+++ +|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.++ +||++ ||+
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~ 92 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARM 92 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGC
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCc
Confidence 578999 99999988 799999999999999999999999999999999999999999999999877 99997 899
Q ss_pred cCCCCeEEEEEEecCCCcceeEeccccccc-----ccceEEEEEecCCCCCCCCCC--CCCceeeeecccccCChHHHHH
Q 039963 113 IQPGRSYTYQFTIEGQEGTLWWHAHSRWIR-----ATVYGAIIIYPRIGSSYPFPV--PNREIPILLGEWWDKNPMDVLM 185 (578)
Q Consensus 113 i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~~~d~~~~~~~~~~~ 185 (578)
|.||++++|+|++++++||||||||.++.+ +||+|+|||+++++...+++. .++|++|+++||+++...+..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~- 171 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE- 171 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE-
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee-
Confidence 999999999999855699999999996533 499999999988654333433 478999999999886543221
Q ss_pred HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEE-eCceeEEEeecCccc-cee
Q 039963 186 QAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGV-ANHNLTVVGVDTSYT-KAF 263 (578)
Q Consensus 186 ~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p~ 263 (578)
....+.....+++++|||+.+ +.+++++| +|||||+|+|..+.+.|+| +||+|+||+.||.++ +|.
T Consensus 172 -~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~ 239 (451)
T 2uxt_A 172 -YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPV 239 (451)
T ss_dssp -CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEE
T ss_pred -cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCce
Confidence 111222345679999999987 68999999 9999999999999999999 899999999999987 899
Q ss_pred EeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccc-------cCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCC
Q 039963 264 STSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANV-------AFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTL 336 (578)
Q Consensus 264 ~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~ 336 (578)
.++++.|+|||||||+|++++ +|+|+|++.....+.+ ........++++|....... ... ..+
T Consensus 240 ~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~------~~~---~~~ 309 (451)
T 2uxt_A 240 SVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP------LVT---DSL 309 (451)
T ss_dssp EESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-------------CC
T ss_pred EeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc------Ccc---ccC
Confidence 999999999999999999994 6899999876433211 01223446788887654310 000 011
Q ss_pred CCCCCchhhhhhhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhh
Q 039963 337 PGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAY 416 (578)
Q Consensus 337 p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~ 416 (578)
|. .|.++.+...+...++++.+ + + .|+|||++|..++.
T Consensus 310 p~------------~L~~~~~~~~~~~~~~~~~l--~------------------~---~~~iNg~~f~~~~~------- 347 (451)
T 2uxt_A 310 PM------------RLLPTEIMAGSPIRSRDISL--G------------------D---DPGINGQLWDVNRI------- 347 (451)
T ss_dssp CS------------CSSSSCCCCCCCSEEEEEEE--C------------------S---SSSBTTBCCCTTCC-------
T ss_pred cc------------ccCCCCCCCCCCcceEEEEE--e------------------e---EEEECCEeCCCCCC-------
Confidence 10 12222221111222222222 1 1 37899998863321
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccC
Q 039963 417 FQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFG 496 (578)
Q Consensus 417 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g 496 (578)
.+.++.|++|+|+|+|. +.||||||||+||||+++..
T Consensus 348 --------------------------------------~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~ 384 (451)
T 2uxt_A 348 --------------------------------------DVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA 384 (451)
T ss_dssp --------------------------------------CEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB
T ss_pred --------------------------------------cEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc
Confidence 35779999999999994 48999999999999998632
Q ss_pred CCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCcee----EEEEeechhhHhccceEEEEEecCc
Q 039963 497 NFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGI----WFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 497 ~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
.+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|+|.+..
T Consensus 385 ---------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 385 ---------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp ---------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred ---------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 245568999999999 999999999999988 9999999999999999999997653
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.3e-78 Score=658.09 Aligned_cols=420 Identities=21% Similarity=0.263 Sum_probs=318.2
Q ss_pred ceeEEEE-EEEe--eecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccc
Q 039963 34 EIQFHEF-IEAK--PVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQ 110 (578)
Q Consensus 34 ~~~~~~l-~~~~--~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~ 110 (578)
..++|+| +++. .+.++|+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++... +||++ |
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---E 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---S
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---C
Confidence 3578999 8864 4678899999999999999999999999999999999999999999999998764 99974 7
Q ss_pred cccCCCCeEEEEEEecCCCcceeEeccccccc-----ccceEEEEEecCCCCCCCCCC--CCCceeeeecccccCChHHH
Q 039963 111 CPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIR-----ATVYGAIIIYPRIGSSYPFPV--PNREIPILLGEWWDKNPMDV 183 (578)
Q Consensus 111 ~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~~~d~~~~~~~~~ 183 (578)
|+|.||++++|+|++.+++||||||||.++++ +||+|+|||+++.+...+++. .++|++|+++||++....+.
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 99999999999998866689999999998754 499999999998876555544 26789999999987653321
Q ss_pred HHHHHhcC-CCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeC-------ceeEEEee
Q 039963 184 LMQAIFTG-AAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVAN-------HNLTVVGV 255 (578)
Q Consensus 184 ~~~~~~~g-~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~g-------h~~~via~ 255 (578)
.. ..+ .....++.++|||+.+ +.+.+++ ++|||||||+|+.+.+.|+|++ |+|+||++
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~ 255 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS 255 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE
T ss_pred ec---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe
Confidence 11 111 1233578999999987 5688888 5899999999999999999987 99999999
Q ss_pred cCccc-ceeEeeEEEEccCceEEEEEEeCCCCc-eeEEEEeeccc-ccc-cCCCcceEEEEEeccCCCCCCCCCCCCCCC
Q 039963 256 DTSYT-KAFSTSVIMIAPGQTTNVLLTADQPPA-RYYMAARAYNS-ANV-AFDNTTTTAILAYKSAPCNAKNGGSNSSAP 331 (578)
Q Consensus 256 DG~~~-~p~~~d~v~l~pger~dv~v~~~~~~G-~y~i~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~~~~ 331 (578)
||.++ +|+.++++.|+|||||||+|++++.+| +|+|+...... +.+ ........++++|........ ...
T Consensus 256 DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-----~~~- 329 (534)
T 3abg_A 256 DSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ-----PDT- 329 (534)
T ss_dssp TTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC-----SCC-
T ss_pred CCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC-----CCC-
Confidence 99864 899999999999999999999997677 69998754211 111 111223457888876443100 000
Q ss_pred CCCCCCCCCCchhhhhhhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcch
Q 039963 332 VFPTLPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNS 411 (578)
Q Consensus 332 ~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ 411 (578)
...| ..++.+.....+...++++.+ .. . ...|+|||++|..+..+
T Consensus 330 --~~~P------------~~L~~~~~p~~~~~~~~~~~~--~~----------------~--~~~w~iNG~~f~~~~~p- 374 (534)
T 3abg_A 330 --SVVP------------ANLRDVPFPSPTTNTPRQFRF--GR----------------T--GPTWTINGVAFADVQNR- 374 (534)
T ss_dssp --CCCC------------CCCCCCSCCCCCCCCCEEEEC--SC----------------C--CSTTCCCCBTTBCTTSC-
T ss_pred --CCCc------------cccccCCCCCCccccceEEEE--ec----------------c--CceeEECCcccCCCCCc-
Confidence 0011 012221111112223443322 11 1 12488999988643220
Q ss_pred hhhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEE
Q 039963 412 LMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVV 491 (578)
Q Consensus 412 ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl 491 (578)
....++.|++|+|+|+|.+ ..+.||||||||+||||
T Consensus 375 ------------------------------------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl 410 (534)
T 3abg_A 375 ------------------------------------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVI 410 (534)
T ss_dssp ------------------------------------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEE
T ss_pred ------------------------------------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEE
Confidence 1235689999999999965 24689999999999999
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEE-eCCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 492 GSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFV-ANNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 492 ~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
+++.|.+. ....++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.|...+
T Consensus 411 ~~~~g~~~----~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 411 SRTSGNNA----RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EESSCCSS----SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEcCCCCc----CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 99655432 11234455 8999999999999999999 8999999999999999999999999998654
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.9e-77 Score=650.83 Aligned_cols=428 Identities=18% Similarity=0.249 Sum_probs=313.9
Q ss_pred eeEEEE-EEEeeec--CCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC----------------------ceeE
Q 039963 35 IQFHEF-IEAKPVK--RLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY----------------------NITL 89 (578)
Q Consensus 35 ~~~~~l-~~~~~~~--~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~----------------------~~si 89 (578)
..+|+| +++.... +++..+.+|+|||++|||+||+++||+|+|+|+|+|+. +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 345888 8776654 45679999999999999999999999999999999975 8999
Q ss_pred EecccccCCCCCCCCCCc--ccccccCCCCeE---EEEEEecCCCcceeEecccccc----c-ccceEEEEEecCCCCCC
Q 039963 90 HWHGVNLKGNPWADGPEY--VTQCPIQPGRSY---TYQFTIEGQEGTLWWHAHSRWI----R-ATVYGAIIIYPRIGSSY 159 (578)
Q Consensus 90 H~HG~~~~~~~~~DG~~~--~~~~~i~PG~~~---~y~~~~~~~~Gt~~YH~h~~~~----~-~Gl~G~liV~~~~~~~~ 159 (578)
||||+++.+ ++||+++ ++||+|.||++| +|+|++++++||||||||.++. . +||+|+|||+++.+...
T Consensus 105 HwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 999999875 4999986 789999999555 9999876689999999999763 2 49999999999876555
Q ss_pred CCCCCCCceeeeecccccCChHHHHHHHH----------hcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEE
Q 039963 160 PFPVPNREIPILLGEWWDKNPMDVLMQAI----------FTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVL 229 (578)
Q Consensus 160 ~~~~~d~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~r 229 (578)
+++.+++|++|+++||+++...+...... ........+++++|||+.+ +.+.+++| +||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEE
Confidence 56677899999999998765432211000 0001234578999999987 67899885 899
Q ss_pred EEEEEcCCCCcEEEEEeCc-eeEEEeecCccc-ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcc
Q 039963 230 LRIINAAMNQELFFGVANH-NLTVVGVDTSYT-KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTT 307 (578)
Q Consensus 230 lrliN~~~~~~~~~~l~gh-~~~via~DG~~~-~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~ 307 (578)
|||||+|+.+.+.|+|+|| +|+||++||.++ +|+.++++.|+|||||||+|++++.+|++..... ...+........
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~-~~~~~~~~~~~~ 330 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILAN-SAGCGGDVNPET 330 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEE-CCCSSSSCCTTT
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEe-cccccccCCCCC
Confidence 9999999999999999999 999999999998 8999999999999999999999976787433222 112211112223
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCCCC-CCCccceEEEEEeecccccCCCCCCCC
Q 039963 308 TTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVK-VPTVIDEDLFFTVGLGLINCSNPNSPR 386 (578)
Q Consensus 308 ~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~ 386 (578)
..++++|........ ..... .|.. +..+...+ .....++++.+...+..
T Consensus 331 ~~~il~~~~~~~~~~-----~~~~~---~p~~------------l~~~~~~~~~~~~~~~~~~l~~~~~~---------- 380 (513)
T 2wsd_A 331 DANIMQFRVTKPLAQ-----KDESR---KPKY------------LASYPSVQHERIQNIRTLKLAGTQDE---------- 380 (513)
T ss_dssp TTEEEEEECCSCCSS-----CCCCC---CCSB------------CSCCGGGCCCCEEEEEEEEEEEEECT----------
T ss_pred CcceEEEEeccCccc-----CccCC---CCcc------------ccCCCCcccCCCcceEEEEEEeecCC----------
Confidence 457888876532110 00011 1110 11110000 11123444544433221
Q ss_pred ccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEE
Q 039963 387 CQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQL 466 (578)
Q Consensus 387 ~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 466 (578)
.+ ...|.+||++|..+. .+.++.|++|+|
T Consensus 381 ----~g-~~~~~iNg~~~~~~~----------------------------------------------~~~~~~g~~~~w 409 (513)
T 2wsd_A 381 ----YG-RPVLLLNNKRWHDPV----------------------------------------------TETPKVGTTEIW 409 (513)
T ss_dssp ----TS-CEEEEETTBCTTSCC----------------------------------------------CBCCBTTCEEEE
T ss_pred ----CC-CceEeECCccCCCcc----------------------------------------------cEecCCCCEEEE
Confidence 12 246789998875221 134688999999
Q ss_pred EEEeCCCCCCCCCCccccCCceEEEEeccC---CCCCCC------CCCCCCCCCCCcceeEEeCCCcEEEEEEEe-CCce
Q 039963 467 VWQDTSIVTVEDHPMHLHGHEFYVVGSGFG---NFNPST------DTPKFNLIDPPRRNTIGMPPGGWVAIRFVA-NNPG 536 (578)
Q Consensus 467 ~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vpp~~~~~irf~a-dnpG 536 (578)
+|.|.+ .+.||||||||+||||+++.. .|++.. ........++.|||||.|+|+++++|+|++ ||||
T Consensus 410 ~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG 486 (513)
T 2wsd_A 410 SIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG 486 (513)
T ss_dssp EEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE
T ss_pred EEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC
Confidence 999965 579999999999999998742 122110 000112224569999999999999999998 8999
Q ss_pred eEEEEeechhhHhccceEEEEEec
Q 039963 537 IWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 537 ~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
.|+|||||++|++.|||+.|+|.+
T Consensus 487 ~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 487 RYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CEEEEcCChhhhhcCCceeEEEeC
Confidence 999999999999999999999965
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.7e-77 Score=639.02 Aligned_cols=414 Identities=21% Similarity=0.342 Sum_probs=310.4
Q ss_pred cccceeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcc
Q 039963 31 SHAEIQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYV 108 (578)
Q Consensus 31 a~~~~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 108 (578)
+.+.+++|+| +++..++. +|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+ ++||++
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 5678899999 99999986 69999999999999999999999999999999999999999999999854 599985
Q ss_pred cccccCCCCeEEEEEEecCC-CcceeEecccccc----c-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHH
Q 039963 109 TQCPIQPGRSYTYQFTIEGQ-EGTLWWHAHSRWI----R-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMD 182 (578)
Q Consensus 109 ~~~~i~PG~~~~y~~~~~~~-~Gt~~YH~h~~~~----~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~ 182 (578)
||+|.||++++|+|+++++ +||||||||.++. . +||+|+|||+++++...++ ++++ |+++||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999998433 7999999998643 3 4999999999987654333 3455 9999998765332
Q ss_pred HHH---HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcc
Q 039963 183 VLM---QAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSY 259 (578)
Q Consensus 183 ~~~---~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~ 259 (578)
... .....| ..++.++|||+.+ |.+++++|+ ||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 197 ~~~~~~~~~~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 110 001112 3468999999987 789999998 9999999999999999999999999999887
Q ss_pred c-ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeeccccccc---CCCcceEEEEEeccCCCCCCCCCCCCCCCCCCC
Q 039963 260 T-KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVA---FDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPT 335 (578)
Q Consensus 260 ~-~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~ 335 (578)
+ +|+.++++.|+|||||||+|+++ .++.|.+.+......... .........+++.+... .+|.
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------------~lP~ 328 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENV------------ELPK 328 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCC------------CCCS
T ss_pred cCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCCCc------------cCCc
Confidence 6 89999999999999999999999 468899988654321111 11122334444433110 0111
Q ss_pred CCCCCCchhhhhhhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCC-----eeeEeecceeecCCCcc
Q 039963 336 LPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGT-----RFAASINNVSFEFPTGN 410 (578)
Q Consensus 336 ~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~iN~~~~~~p~~~ 410 (578)
.+..+.+...+ ..++++.++.... ... .......+. ...|+|||+.|...
T Consensus 329 ---------------~l~~~~~~~~~-~~~r~~~l~~~~~--~~~----~~~~~~~~~~~~~~~~~~~iNG~~~~~~--- 383 (481)
T 3zx1_A 329 ---------------NLKIFKPSEEP-KEFKEIIMSEDHM--QMH----GMMGKSEGELKIALASMFLINRKSYDLK--- 383 (481)
T ss_dssp ---------------CSCCCCCCCCC-CEEEEEEEEECCS--TTT----TGGGCCHHHHHHHHHTTEEETTBCCCTT---
T ss_pred ---------------cccCCCCCCCC-CcEEEEEEeccch--hcc----cccccccccccccccceeEECCEeCCCC---
Confidence 01111111111 2334454443211 000 000000000 01389999877521
Q ss_pred hhhhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEE
Q 039963 411 SLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYV 490 (578)
Q Consensus 411 ~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~V 490 (578)
.+.+.++.|++|+|+|.|.+ .+.||||||||.|+|
T Consensus 384 ------------------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~v 418 (481)
T 3zx1_A 384 ------------------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFEL 418 (481)
T ss_dssp ------------------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEE
T ss_pred ------------------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEE
Confidence 12467899999999999954 689999999999999
Q ss_pred EEe--ccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEec
Q 039963 491 VGS--GFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 491 l~~--g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
+++ +.... ...++.|||||.|+|+++++|+|++||||.|+|||||++|+|.|||+.|+|.|
T Consensus 419 l~~~~~g~~~---------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 419 ISSKLNGKVQ---------KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp EEEEETTEEE---------ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred EEecccCCCC---------CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 998 32111 12357899999999999999999999999999999999999999999999964
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=7.3e-77 Score=634.76 Aligned_cols=384 Identities=17% Similarity=0.301 Sum_probs=296.5
Q ss_pred EEECCc-CCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeE
Q 039963 56 VTVNGQ-FPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWW 134 (578)
Q Consensus 56 ~~~NG~-~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~Y 134 (578)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++.+ ++||+++ |+|.||++++|+|++++++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 999999 9999999999999999999999999999999999864 4999987 899999999999998558999999
Q ss_pred eccccc----cc-ccceEEEEEecCCCCCCCCCCCC-CceeeeecccccCChHHHHH----HHHhcCCCCCCCceEEEcC
Q 039963 135 HAHSRW----IR-ATVYGAIIIYPRIGSSYPFPVPN-REIPILLGEWWDKNPMDVLM----QAIFTGAAPNVSDAFTING 204 (578)
Q Consensus 135 H~h~~~----~~-~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~~~d~~~~~~~~~~~----~~~~~g~~~~~~~~~liNG 204 (578)
|||.++ +. +||+|+|||+++++. .+++ +| +|++|+++||+++. .+... ..... ...+++++|||
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~---~~~~~~~liNG 176 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIA---GFLGNAVLVNG 176 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHH---CCCCSEEEETT
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccccccccccc---CccccEEEECC
Confidence 999544 44 499999999998764 3333 45 89999999998865 32110 00111 23568999999
Q ss_pred cCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEE--eC---ceeEEEeecCcccc-eeEeeEEEEccCceEEE
Q 039963 205 QPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGV--AN---HNLTVVGVDTSYTK-AFSTSVIMIAPGQTTNV 278 (578)
Q Consensus 205 ~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l--~g---h~~~via~DG~~~~-p~~~d~v~l~pger~dv 278 (578)
+.+ +.+++++| +|||||||+|+.+.+.|+| +| |+|+||++||.+++ |..++++.|+|||||||
T Consensus 177 ~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 177 VKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp EET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred ccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 987 78999999 9999999999999999999 99 99999999999996 99999999999999999
Q ss_pred EEEeCCCCceeEEEEeecccccc----------cCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhh
Q 039963 279 LLTADQPPARYYMAARAYNSANV----------AFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAY 348 (578)
Q Consensus 279 ~v~~~~~~G~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~ 348 (578)
+|++++ +.|+|++.....+.+ ........++++|.+.... ..+..
T Consensus 246 lv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~---------------- 300 (448)
T 3aw5_A 246 VVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEA-------VPVEA---------------- 300 (448)
T ss_dssp EEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCC-------CCCCC----------------
T ss_pred EEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCC-------CCccc----------------
Confidence 999983 789999886543211 1122346788888765431 00000
Q ss_pred hcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCC
Q 039963 349 TAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDF 428 (578)
Q Consensus 349 ~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~ 428 (578)
|..+++..++...++++.+..+ ...|+|||++|..++.
T Consensus 301 ---L~~lp~~~~~~~~~~~~~l~~~--------------------~~~~~iNg~~~~~~~p------------------- 338 (448)
T 3aw5_A 301 ---LSDPPPEPPKPTRTRRFALSLS--------------------GMQWTINGMFWNASNP------------------- 338 (448)
T ss_dssp ---CSCCCCCCCCCSEEEEEEEEEE--------------------TTEEEETTBCCCTTCT-------------------
T ss_pred ---cCCCCCCCCCCCceEEEEEeCC--------------------CceeeECCCcCCCCCC-------------------
Confidence 1111111222334455554332 1259999998863211
Q ss_pred CCCCCccccCCCCCcccccccCCCceEEE-eeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCC
Q 039963 429 PPVPPIKFDYTGNVSRVLWQPLKGTKLYK-LKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKF 507 (578)
Q Consensus 429 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~ 507 (578)
.+. ++.|++|+|+|+|.+ ..+.||||||||+||||+++ |.+....+...+
T Consensus 339 --------------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~ 389 (448)
T 3aw5_A 339 --------------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVD 389 (448)
T ss_dssp --------------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCS
T ss_pred --------------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCccccccccc
Confidence 123 688999999999964 15789999999999999985 444211111222
Q ss_pred ----CCCCCCcceeEEeCCCcEEEEE--EE---eCCceeEEEEeechhhHhccceEEEEEe
Q 039963 508 ----NLIDPPRRNTIGMPPGGWVAIR--FV---ANNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 508 ----~~~~p~~rDTv~vpp~~~~~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
++.++.|||||.|+|+++++|+ |+ +||| |+|||||++|++.|||++|+|.
T Consensus 390 ~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 390 NRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp TTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 3345579999999999998665 98 8999 9999999999999999999983
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-75 Score=652.59 Aligned_cols=460 Identities=18% Similarity=0.223 Sum_probs=302.9
Q ss_pred cceeEEEE-EEEeee--cCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCc-----------------------
Q 039963 33 AEIQFHEF-IEAKPV--KRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYN----------------------- 86 (578)
Q Consensus 33 ~~~~~~~l-~~~~~~--~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~----------------------- 86 (578)
...+.|++ +++... .+++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 34566788 665554 5567788999999999999999999999999999999654
Q ss_pred ------------------eeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEecccccc----c-c
Q 039963 87 ------------------ITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWI----R-A 143 (578)
Q Consensus 87 ------------------~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~----~-~ 143 (578)
|+|||||+++.+ ++||++ ||+|.||++|+|+|++++++||||||+|.++. . +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678888888754 488864 99999999999999986678999999998653 3 4
Q ss_pred cceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHHHHH-------------h---cCCCCCCCceEEEcCcCC
Q 039963 144 TVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAI-------------F---TGAAPNVSDAFTINGQPG 207 (578)
Q Consensus 144 Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~-------------~---~g~~~~~~~~~liNG~~~ 207 (578)
||+|+|||+++.+..++++.+++|++|+++||++....+...... . .......++.+++||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999887766777788999999999997654322110000 0 001223468899999987
Q ss_pred CCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCc-------eeEEEeecCccc-ceeEe------eEEEEccC
Q 039963 208 DLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANH-------NLTVVGVDTSYT-KAFST------SVIMIAPG 273 (578)
Q Consensus 208 ~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~------d~v~l~pg 273 (578)
+.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.+ ++|.|+||
T Consensus 265 ----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 265 ----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 6777775 58999999999999999999998 499999999988 56655 48999999
Q ss_pred ceEEEEEEeCCCCceeEEEEeeccccc-c---cCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhh
Q 039963 274 QTTNVLLTADQPPARYYMAARAYNSAN-V---AFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYT 349 (578)
Q Consensus 274 er~dv~v~~~~~~G~y~i~~~~~~~~~-~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~ 349 (578)
|||||+|++++.+|.++.......... . .........++++....... .....+|........
T Consensus 334 eRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~------- 400 (612)
T 3gyr_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCE------EDSFALPEVLSGSFR------- 400 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSC------CCCCCCCSSCCSSCC-------
T ss_pred eEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCC------CCccccccccccccc-------
Confidence 999999999987676555443221111 1 11223345566665443211 011111111000000
Q ss_pred cccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceee----cCCCcchhhhhhccCCCCccc
Q 039963 350 AQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSF----EFPTGNSLMQAYFQDQPGVFT 425 (578)
Q Consensus 350 ~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~----~~p~~~~ll~~~~~~~~g~~~ 425 (578)
.. ....+ .............. ........+.++.... ..+.. +...
T Consensus 401 ----~~-~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 450 (612)
T 3gyr_A 401 ----RM-SHDIP-HGHRLIVLTPPGTK------------GSGGHPEIWEMAEVEDPADVQVPAE------------GVIQ 450 (612)
T ss_dssp ----CC-CTTSC-CEEEEEEEECTTCT------------TTTTCCEEEEEEECC-----CCSCT------------TEEE
T ss_pred ----cc-ccccc-cccccccccccccc------------ccccccccccccccccccccccccc------------ceee
Confidence 00 00000 00000100000000 0000011111111100 00000 0000
Q ss_pred CCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCC---
Q 039963 426 TDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPST--- 502 (578)
Q Consensus 426 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~--- 502 (578)
.......+..+..++ ....+...+.+++|++|+|+|+|.+ .+.||||||||+||||+++.+.++...
T Consensus 451 ~~~~~~~~~~~~~n~-------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~ 520 (612)
T 3gyr_A 451 VTGADGRTKTYRRTA-------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLAL 520 (612)
T ss_dssp EECTTSCEEEEEEEE-------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTT
T ss_pred eccCCCccccccccC-------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccccccc
Confidence 000000000010000 0112344578899999999999965 679999999999999998654332210
Q ss_pred ------------CCCCCCCCCCCcceeEEeCCCcEEEEEEE-eCCceeEEEEeechhhHhccceEEEEEecC
Q 039963 503 ------------DTPKFNLIDPPRRNTIGMPPGGWVAIRFV-ANNPGIWFMHCHLDSHLTWGLAMAFLVENG 561 (578)
Q Consensus 503 ------------~~~~~~~~~p~~rDTv~vpp~~~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 561 (578)
.....++.++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.++
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p 592 (612)
T 3gyr_A 521 GGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp TEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECH
T ss_pred cccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCC
Confidence 11235567788999999999999999998 799999999999999999999999999764
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.6e-75 Score=623.23 Aligned_cols=425 Identities=19% Similarity=0.300 Sum_probs=305.9
Q ss_pred ceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccc
Q 039963 34 EIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCP 112 (578)
Q Consensus 34 ~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~ 112 (578)
..+.|+| +++..++++|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.+. +||++ ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 4578999 99999999999999999999999999999999999999999999999999999998754 99986 899
Q ss_pred cCCCCeEEEEEEecCCCcceeEeccccccc-----ccceEEEEEecCCCCCCCCCC--CCCceeeeecccccCChHHHHH
Q 039963 113 IQPGRSYTYQFTIEGQEGTLWWHAHSRWIR-----ATVYGAIIIYPRIGSSYPFPV--PNREIPILLGEWWDKNPMDVLM 185 (578)
Q Consensus 113 i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~~~d~~~~~~~~~~~ 185 (578)
|.||++++|+|++.+++||||||||.++.+ +||+|+|||+++++...+++. ..+|++|+++||+++...+...
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 999999999999865689999999986533 499999999988754444443 2468999999998865332110
Q ss_pred H--HHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEE-eCceeEEEeecCccc-c
Q 039963 186 Q--AIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGV-ANHNLTVVGVDTSYT-K 261 (578)
Q Consensus 186 ~--~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l-~gh~~~via~DG~~~-~ 261 (578)
. ... ......++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||.++ +
T Consensus 171 ~~~~~~-~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 171 QLDVMT-AAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCSHHH-HHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred cccccc-cccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 0 000 00123468999999987 45555 6789999999999999999999 699999999999987 8
Q ss_pred eeEeeEEEEccCceEEEEEEeCCCCceeEEEEeeccccc---ccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCC
Q 039963 262 AFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSAN---VAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPG 338 (578)
Q Consensus 262 p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~ 338 (578)
|+.++++.|+|||||||+|++++ .+.|.+++....... ..+.. ...+++...... .....+|.
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--------~~~~~~P~--- 304 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDK--PHPVMRIQPIAI--------SASGALPD--- 304 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTS--CEEEEEEEEEEE--------ECCCCCCS---
T ss_pred ccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccC--ccceeEeccccc--------CCCCCCCc---
Confidence 99999999999999999999994 678999876533210 11221 222333322111 00001110
Q ss_pred CCCchhhhhhhcccccCCCC-CCCCccceEEEEEeecc--------------cccCCCC---------CCCCc-cCCCCC
Q 039963 339 FNDTATATAYTAQIRSLHEV-KVPTVIDEDLFFTVGLG--------------LINCSNP---------NSPRC-QGPNGT 393 (578)
Q Consensus 339 ~~~~~~~~~~~~~l~~l~p~-~~p~~~d~~~~~~~~~~--------------~~~~~~~---------~~~~~-~~~~g~ 393 (578)
.|..+++. .+....++++.+.+... ....... ....+ ....+.
T Consensus 305 ------------~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 372 (488)
T 3od3_A 305 ------------TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGG 372 (488)
T ss_dssp ------------CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCG
T ss_pred ------------ccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccc
Confidence 01111110 01112345555544210 0000000 00000 000111
Q ss_pred ee----eEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEE
Q 039963 394 RF----AASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQ 469 (578)
Q Consensus 394 ~~----~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~ 469 (578)
.+ .|.|||++|...+ ..+.++.|++|+|.|.
T Consensus 373 ~~~~~~~~~ING~~~~~~~---------------------------------------------~~~~~~~G~~e~w~l~ 407 (488)
T 3od3_A 373 KFDFHHANKINGQAFDMNK---------------------------------------------PMFAAAKGQYERWVIS 407 (488)
T ss_dssp GGCGGGCEEETTBCCCTTC---------------------------------------------CSEECCBSSCEEEEEE
T ss_pred cccccceeeECCeeCCCCC---------------------------------------------CceEcCCCCEEEEEEE
Confidence 12 3789998876221 1367899999999999
Q ss_pred eCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC----CceeEEEEeech
Q 039963 470 DTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN----NPGIWFMHCHLD 545 (578)
Q Consensus 470 N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad----npG~w~~HCHil 545 (578)
|.+ ..+.|||||||++|+|++.+..... ..++.|||||.|+ |+++.|+|+++ +||.|||||||+
T Consensus 408 N~~--~~~~Hp~HlHg~~F~Vl~~~g~~~~---------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 408 GVG--DMMLHPFHIHGTQFRILSENGKPPA---------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CTT--CCCCEEEEETTCCBEEEEBTTBCCC---------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred eCC--CCCCccEEEcCceEEEeccCCCccc---------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 965 2468999999999999998632221 2246799999999 99999999974 578999999999
Q ss_pred hhHhccceEEEEE
Q 039963 546 SHLTWGLAMAFLV 558 (578)
Q Consensus 546 ~H~d~GM~~~~~V 558 (578)
+|+|.|||+.|+|
T Consensus 476 ~Hed~GMm~~f~V 488 (488)
T 3od3_A 476 EHEDTGMMLGFTV 488 (488)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHhcCCcEEEEC
Confidence 9999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.8e-73 Score=621.31 Aligned_cols=453 Identities=18% Similarity=0.225 Sum_probs=312.5
Q ss_pred cceeEEEE-EEEeeecC--CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCc-----------------------
Q 039963 33 AEIQFHEF-IEAKPVKR--LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYN----------------------- 86 (578)
Q Consensus 33 ~~~~~~~l-~~~~~~~~--~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~----------------------- 86 (578)
...++|+| +++..+.. ++..+.+|+|||++|||+|++++||+|+|+++|+|+.+
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44678999 88877654 45789999999999999999999999999999999853
Q ss_pred ------------------eeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccc----cc-c
Q 039963 87 ------------------ITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW----IR-A 143 (578)
Q Consensus 87 ------------------~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~----~~-~ 143 (578)
++|||||+++.+. +||++ ||+|.||++++|+|++.+++||||||||.++ +. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999998765 89975 8999999999999988668999999999986 33 5
Q ss_pred cceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHH-HHH-HH------Hh----cCC----CCCCCceEEEcCcCC
Q 039963 144 TVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMD-VLM-QA------IF----TGA----APNVSDAFTINGQPG 207 (578)
Q Consensus 144 Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~----~~~~~~~~liNG~~~ 207 (578)
||+|+|||+++++...+++.+|+|++|+++||+++...+ .+. +. +. .+. .+..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987656666778999999999999864321 000 00 00 001 124579999999987
Q ss_pred CCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCc-------eeEEEeecCccc-ceeEee------EEEEccC
Q 039963 208 DLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANH-------NLTVVGVDTSYT-KAFSTS------VIMIAPG 273 (578)
Q Consensus 208 ~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~v~l~pg 273 (578)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 78999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCc-eeEEEEeecccccccC-----CCcceEEEEEeccCCCCCCCCCCCCCCCCCCC-CCC-CCCchhh
Q 039963 274 QTTNVLLTADQPPA-RYYMAARAYNSANVAF-----DNTTTTAILAYKSAPCNAKNGGSNSSAPVFPT-LPG-FNDTATA 345 (578)
Q Consensus 274 er~dv~v~~~~~~G-~y~i~~~~~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~-~p~-~~~~~~~ 345 (578)
|||||+|++++.+| +|.|+........+.. ........+++..... .....+|. +.. .......
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~--------~~~~~~P~~L~~~~~~l~~~ 405 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCE--------EDSFALPEVLSGSFRRMSHD 405 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSC--------CCCCCCCSSCCSSCCCCCTT
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCC--------CCCCCCChhhccccccCCcc
Confidence 99999999998776 5888765421111100 0111333444443321 00111111 000 0000000
Q ss_pred hhhhcccccC-CCCCCC-CccceEEEEEeeccccc--CCCCCCCC--ccCCCCCeeeEeecceeecCCCcchhhhhhccC
Q 039963 346 TAYTAQIRSL-HEVKVP-TVIDEDLFFTVGLGLIN--CSNPNSPR--CQGPNGTRFAASINNVSFEFPTGNSLMQAYFQD 419 (578)
Q Consensus 346 ~~~~~~l~~l-~p~~~p-~~~d~~~~~~~~~~~~~--~~~~~~~~--~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~ 419 (578)
......+..+ .+.... ....+.+.+........ .+ .... ....+|....|++||+.|.
T Consensus 406 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~iNG~~~~-------------- 469 (612)
T 2g23_A 406 IPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVP--AEGVIQVTGADGRTKTYRRTAATFN-------------- 469 (612)
T ss_dssp SCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCS--CTTEEEEECTTSCEEEEEEEECSTT--------------
T ss_pred cccceeEEeeccccccccccccceeeccccccccccccc--cccceeeeccCCceeEEEECCccCC--------------
Confidence 0000000000 000000 00000111110000000 00 0000 0011233344666666553
Q ss_pred CCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCC-
Q 039963 420 QPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNF- 498 (578)
Q Consensus 420 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~- 498 (578)
....++++.|++|+|+|.|.+ .+.||||||||.|+|++.+...+
T Consensus 470 --------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~ 514 (612)
T 2g23_A 470 --------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDAS 514 (612)
T ss_dssp --------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEECT
T ss_pred --------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCcccc
Confidence 123477899999999999975 67999999999999999753322
Q ss_pred --CCCCC------------CCCCCCCCCCcceeEEeCCCcEEEEEEEeC-CceeEEEEeechhhHhccceEEEEEec
Q 039963 499 --NPSTD------------TPKFNLIDPPRRNTIGMPPGGWVAIRFVAN-NPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 499 --~~~~~------------~~~~~~~~p~~rDTv~vpp~~~~~irf~ad-npG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
+...+ ....+..++.|||||.|+|+++++|+|+++ |||.|||||||++|+|.|||+.|+|..
T Consensus 515 ~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p 591 (612)
T 2g23_A 515 GFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMP 591 (612)
T ss_dssp TEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEEC
T ss_pred cccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECc
Confidence 11100 023445567899999999999999999999 999999999999999999999999964
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.5e-53 Score=494.22 Aligned_cols=268 Identities=16% Similarity=0.230 Sum_probs=208.6
Q ss_pred cccccceeEEEE-EEEeeecCC--c--------------------------eeeeEE-------EECCc--------CCC
Q 039963 29 SLSHAEIQFHEF-IEAKPVKRL--C--------------------------RTHNTV-------TVNGQ--------FPG 64 (578)
Q Consensus 29 ~~a~~~~~~~~l-~~~~~~~~~--g--------------------------~~~~~~-------~~NG~--------~Pg 64 (578)
..+.+++|+|.+ |++..|+.. + +.+.+. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 666788999999 999888654 2 223333 57877 999
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccC----CCCCCCCCCc--ccccccCCCCeEEEEEEecCC---------C
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLK----GNPWADGPEY--VTQCPIQPGRSYTYQFTIEGQ---------E 129 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~----~~~~~DG~~~--~~~~~i~PG~~~~y~~~~~~~---------~ 129 (578)
|+||+++||+|+|+|+|.|+++++|||||++++ +.+|+||+++ ++||+|+||++++|+|++.++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4578888888 899999999999999998544 4
Q ss_pred cceeEeccccccc---ccceEEEEEecCCCCCCCCC-CCCCceeeeec------ccccCChHHHHHHHHhcCCC------
Q 039963 130 GTLWWHAHSRWIR---ATVYGAIIIYPRIGSSYPFP-VPNREIPILLG------EWWDKNPMDVLMQAIFTGAA------ 193 (578)
Q Consensus 130 Gt~~YH~h~~~~~---~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~~~------d~~~~~~~~~~~~~~~~g~~------ 193 (578)
||||||||.+.++ +||+|+|||++++....|.+ .+|+|++|+++ +|++........ ...+..
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCcccccccccc
Confidence 9999999999876 59999999999876443332 46899999999 566542211110 000000
Q ss_pred -CCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCC-CcEEEEEeCceeEEEeecCcccceeEeeEEEEc
Q 039963 194 -PNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMN-QELFFGVANHNLTVVGVDTSYTKAFSTSVIMIA 271 (578)
Q Consensus 194 -~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~ 271 (578)
...++.++|||+.+ ...+.+++++|++|||||+|+|.. ..+.|||+||.|++ +|..+|++.|+
T Consensus 253 ~~~~~~~~~iNG~~~-------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~ 317 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTF-------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLF 317 (1065)
T ss_dssp HHHHTEEEEETTEET-------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEEC
T ss_pred ccccCcEEEECCccC-------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEEC
Confidence 00235899999975 234679999999999999999975 68999999999993 57899999999
Q ss_pred cCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 272 PGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 272 pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
||||+||+|++++ +|.|+|+||..... ..++.+.++|.+...
T Consensus 318 pGer~dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 318 PATLFDAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQECNK 359 (1065)
T ss_dssp BTCEEEEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECSCC
T ss_pred CCcEEEEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecCCC
Confidence 9999999999995 89999999975332 236788899876543
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.1e-52 Score=428.43 Aligned_cols=270 Identities=24% Similarity=0.406 Sum_probs=226.8
Q ss_pred ceeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCccccc
Q 039963 34 EIQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQC 111 (578)
Q Consensus 34 ~~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~ 111 (578)
++|+|+| +++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+.+....++||+++++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4789999 99998877 588999999999999999999999999999999999999999999999887789999999999
Q ss_pred ccCCCCeEEEEEEecCCCcceeEeccccccc----ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHHHH
Q 039963 112 PIQPGRSYTYQFTIEGQEGTLWWHAHSRWIR----ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQA 187 (578)
Q Consensus 112 ~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~----~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 187 (578)
+|.||++++|+|++ +++||||||||...+. +||+|+|||++++..+.+ ..+|+|++|+++||++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~-~~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIE-KTVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHH-HTCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccccc-ccccceeEEEEEeeccccccc----c
Confidence 99999999999997 7999999999997653 599999999987643211 145899999999998753211 0
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCccc-ceeEee
Q 039963 188 IFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYT-KAFSTS 266 (578)
Q Consensus 188 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 266 (578)
...+.....+++++|||+.++ ....+++++|++|||||+|++. ..+.||||||.|+|++.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGD-HVHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSS-SCEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCC-ceEEEEECCcEEEEEecCCcccCCCcccc
Confidence 111112235689999999863 2245899999999999999995 4789999999999999999988 799999
Q ss_pred EEEEccCceEEEEEEeCCCCceeEEEEeecccccc-cCCCcceEEEEEeccCC
Q 039963 267 VIMIAPGQTTNVLLTADQPPARYYMAARAYNSANV-AFDNTTTTAILAYKSAP 318 (578)
Q Consensus 267 ~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~ 318 (578)
++.|.||||+||+++++ +||.|++|||....... .....+..++|+|++..
T Consensus 227 tv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999999 68999999997543311 11235678999998854
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.3e-55 Score=490.91 Aligned_cols=238 Identities=16% Similarity=0.152 Sum_probs=181.2
Q ss_pred EEEeeecCC-ceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCC----CCCCCCCC--ccccccc
Q 039963 41 IEAKPVKRL-CRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKG----NPWADGPE--YVTQCPI 113 (578)
Q Consensus 41 ~~~~~~~~~-g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~----~~~~DG~~--~~~~~~i 113 (578)
++++..... |+.++.|+ ++|||+||+++||+|+|+|+|.+++++||||||+.+.. .+++||++ .++||+|
T Consensus 53 ~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I 129 (742)
T 2r7e_A 53 VEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKV 129 (742)
T ss_dssp CCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSC
T ss_pred EEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcccccccCcC
Confidence 555555554 66666664 89999999999999999999999999999999999764 33344443 2899999
Q ss_pred CCCCeEEEEEEecC---------CCcceeEecccccc--c-ccceEEEEEecCCCCCCCCCCCCCceeeeecc------c
Q 039963 114 QPGRSYTYQFTIEG---------QEGTLWWHAHSRWI--R-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGE------W 175 (578)
Q Consensus 114 ~PG~~~~y~~~~~~---------~~Gt~~YH~h~~~~--~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d------~ 175 (578)
+||++++|+|++.+ ++||||||||.+.. . +||+|+|||++++....+.....+|+++++++ |
T Consensus 130 ~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w 209 (742)
T 2r7e_A 130 FPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSW 209 (742)
T ss_dssp CTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSS
T ss_pred CCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccc
Confidence 99999999999843 46999999999874 3 49999999999865432222224888888753 5
Q ss_pred ccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCC-cEEEEEeCceeEEEe
Q 039963 176 WDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQ-ELFFGVANHNLTVVG 254 (578)
Q Consensus 176 ~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~-~~~~~l~gh~~~via 254 (578)
+........... .........+.++|||+.+ ...+.+++++|++|||||+|+++.. .|.||||||.|+|++
T Consensus 210 ~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~-------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg 281 (742)
T 2r7e_A 210 HSETKNSLMQDR-DAASARAWPKMHTVNGYVN-------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN 281 (742)
T ss_dssp CCCCCC--------CCSCCCCCCCCEETTBCT-------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT
T ss_pred cccccccccccC-CCccccccCceEEECCccC-------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe
Confidence 554432211111 1111222356789999975 2346789999999999999999765 789999999999985
Q ss_pred ecCcccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeeccc
Q 039963 255 VDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNS 298 (578)
Q Consensus 255 ~DG~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~ 298 (578)
..+|++.|.||++++|+++++ .||.|+++||....
T Consensus 282 --------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~~H 316 (742)
T 2r7e_A 282 --------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHISSH 316 (742)
T ss_dssp --------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSSSS
T ss_pred --------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCChhH
Confidence 257899999999999999999 68999999997543
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=4.1e-51 Score=421.47 Aligned_cols=270 Identities=26% Similarity=0.458 Sum_probs=225.3
Q ss_pred ceeEEEE-EEEeeecCC-ceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCccccc
Q 039963 34 EIQFHEF-IEAKPVKRL-CRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQC 111 (578)
Q Consensus 34 ~~~~~~l-~~~~~~~~~-g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~ 111 (578)
.+++|+| +++..++++ |+.+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+.+...+|+||+++++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 4689999 999998875 99999999999999999999999999999999999999999999999998899999999999
Q ss_pred ccCCCCeEEEEEEecCCCcceeEeccccc--c-c-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHHHH
Q 039963 112 PIQPGRSYTYQFTIEGQEGTLWWHAHSRW--I-R-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQA 187 (578)
Q Consensus 112 ~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 187 (578)
+|.||++++|+|++ .++||||||||... + . +||+|+|||+++.....+ ...|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999997 68999999999876 2 3 599999999987643211 135789999999998632110 0
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCccc-ceeEee
Q 039963 188 IFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYT-KAFSTS 266 (578)
Q Consensus 188 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 266 (578)
...+.....+++++|||+.++ ....+++++|++|||||+|++ ...+.|||+||.|+||+.||.++ .|..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~-~~~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAG-GGIHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECS-SSCEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCC-CceEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 001111124689999999863 224589999999999999999 45899999999999999999988 488999
Q ss_pred EEEEccCceEEEEEEeCCCCceeEEEEeeccccccc-CCCcceEEEEEeccCC
Q 039963 267 VIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVA-FDNTTTTAILAYKSAP 318 (578)
Q Consensus 267 ~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~-~~~~~~~ail~y~~~~ 318 (578)
++.|.||||+||+|+++ .||.|+++||........ ....+..++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 99999999999999998 589999999976532111 1334678999998754
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=5e-49 Score=422.49 Aligned_cols=400 Identities=15% Similarity=0.123 Sum_probs=261.2
Q ss_pred cccceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCccc
Q 039963 31 SHAEIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVT 109 (578)
Q Consensus 31 a~~~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~ 109 (578)
+.+.++++++ ++......+| .++++||++ ||+|+|++||+|+|+|+|.+...+++||||... .+
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~ 88 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RS 88 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------EC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------cc
Confidence 4456677777 6655555444 456999999 899999999999999999998889999998642 25
Q ss_pred ccccCCCCeEEEEEEecCCCcceeEecccccccc-cceEEEEEecCCCCCCCC-----CCCCCceeeeecccccCChHHH
Q 039963 110 QCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIYPRIGSSYPF-----PVPNREIPILLGEWWDKNPMDV 183 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~-----~~~d~e~~l~~~d~~~~~~~~~ 183 (578)
+|+|.||++++|+|++ .++||||||||..+++. ||+|.|+|+++....+.. .....+++..+ |+........
T Consensus 89 ~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 89 AIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred ceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 7899999999999997 57999999999987775 999999999876432210 00001111100 1100000000
Q ss_pred -HH-HHHhcCC-CCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCC-CCcEEEEEeCceeEEEeecCcc
Q 039963 184 -LM-QAIFTGA-APNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAM-NQELFFGVANHNLTVVGVDTSY 259 (578)
Q Consensus 184 -~~-~~~~~g~-~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~-~~~~~~~l~gh~~~via~DG~~ 259 (578)
+. ....... .....+.++|||+.- .|.+++++|++|||||+|.+. ...+.+|+||. ++.||.+
T Consensus 167 ~l~~~~~~~~~~~g~~~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~ 233 (447)
T 2dv6_A 167 DLETVEVKGQLDDNTTYTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA 233 (447)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG
T ss_pred EEEEEEEEEeccCCceeEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC
Confidence 00 0000000 011235789999851 278999999999999999985 35678888874 3678863
Q ss_pred cceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCC
Q 039963 260 TKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGF 339 (578)
Q Consensus 260 ~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~ 339 (578)
+++.|.||||++++++++ .+|+||+|||...... ....+..+.+.|.+... +| ..
T Consensus 234 ------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~--~~~~Gl~g~l~v~~~~~-------------~P---~~ 288 (447)
T 2dv6_A 234 ------AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPT--HITNGMYGLLLVEPEGG-------------LP---QV 288 (447)
T ss_dssp ------GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHH--HHHTTCEEEEEEECTTC-------------SC---CC
T ss_pred ------ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHH--HHhCCCEEEEEEeCCCC-------------CC---CC
Confidence 234599999999999998 4799999999521110 01234567777754321 11 11
Q ss_pred CCchhhhhhhcccccCC-CCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhcc
Q 039963 340 NDTATATAYTAQIRSLH-EVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQ 418 (578)
Q Consensus 340 ~~~~~~~~~~~~l~~l~-p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~ 418 (578)
+... . ..+.... +... ...... ...... .. ......|.+||+.+...
T Consensus 289 d~~~-~----~~~~~~~~~~~~--~~~g~~--~~~~~~----------~~--~~~~~~~~iNG~~~~~~----------- 336 (447)
T 2dv6_A 289 DREF-Y----VMQGEIYTVKSF--GTSGEQ--EMDYEK----------LI--NEKPEYFLFNGSVGSLT----------- 336 (447)
T ss_dssp SEEE-E----EEEEEECBSSCT--TCCEEC--CBBHHH----------HH--TTCCSEEEETTSTTCCC-----------
T ss_pred CeeE-E----EEecccccCCcc--cccccc--cCChHH----------hh--ccCCCEEEECCcccCCC-----------
Confidence 1000 0 0000000 0000 000000 000000 00 01123456776544210
Q ss_pred CCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCC
Q 039963 419 DQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNF 498 (578)
Q Consensus 419 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~ 498 (578)
....+.++.|++++|+|.|.+ ....||||||||+|+||+.+.+ +
T Consensus 337 ---------------------------------~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~-~ 380 (447)
T 2dv6_A 337 ---------------------------------RSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGS-V 380 (447)
T ss_dssp ---------------------------------CCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGC-S
T ss_pred ---------------------------------CCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCc-c
Confidence 113578899999999999976 2468999999999999998532 2
Q ss_pred CCCCCCCCCCCCCCC-cceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcc
Q 039963 499 NPSTDTPKFNLIDPP-RRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDE 563 (578)
Q Consensus 499 ~~~~~~~~~~~~~p~-~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 563 (578)
+..|. +|||+.|+||++++|+|+++|||.|++|||+++|++.||+++|.|++...
T Consensus 381 ----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 ----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp ----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 11333 69999999999999999999999999999999999999999999976543
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.7e-47 Score=391.01 Aligned_cols=262 Identities=22% Similarity=0.285 Sum_probs=218.7
Q ss_pred cccceeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC--CceeEEecccccCCCCCCCCCC
Q 039963 31 SHAEIQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ--YNITLHWHGVNLKGNPWADGPE 106 (578)
Q Consensus 31 a~~~~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DG~~ 106 (578)
+.+++++|+| +++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 4567899999 99999887 799999999999999999999999999999999986 589999999853 68876
Q ss_pred cccccccCCCCeEEEEEEecCCCcceeEeccccc---cc-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHH
Q 039963 107 YVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW---IR-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMD 182 (578)
Q Consensus 107 ~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~ 182 (578)
..+ .|.||++++|+|++ +++||||||||.++ +. +||+|+|||++++. ++.+|+|++++++||++.....
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 543 49999999999997 78999999999754 22 49999999998753 3457899999999999865210
Q ss_pred H-------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEee
Q 039963 183 V-------LMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGV 255 (578)
Q Consensus 183 ~-------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~ 255 (578)
. ..... + ..++.++|||+.++... .+.+++++||+|||||+|++....+.|||+||.|+||+.
T Consensus 182 ~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~ 251 (327)
T 1kbv_A 182 AQGLQPFDMDKAV--A---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYV 251 (327)
T ss_dssp CCEEECBCHHHHH--H---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred cccccccChhHhc--c---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEc
Confidence 0 01111 1 24589999999875321 257899999999999999998889999999999999999
Q ss_pred cCcccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 256 DTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 256 DG~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
||.+++|..++++.|+||||+||+|+++ .||.|+|+||..... ...+..|+++|++...
T Consensus 252 DG~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 252 EGGKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRA----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHH----HHSSCEEEEEEESCCC
T ss_pred CCCcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEEEecccccc----ccCCcEEEEEECCCCC
Confidence 9999999999999999999999999999 589999999975432 1246789999987653
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=4.9e-47 Score=382.15 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=209.9
Q ss_pred ccceeEEEE-EEEeeecCC-ceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCccc
Q 039963 32 HAEIQFHEF-IEAKPVKRL-CRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVT 109 (578)
Q Consensus 32 ~~~~~~~~l-~~~~~~~~~-g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~ 109 (578)
....++|+| +++..+... |+.+.+|+|||++|||+||+++||+|+|+|+|.++.+++|||||++. .++||+++++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 455789999 998887664 99999999999999999999999999999999999999999999973 4599999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeEeccccc---cc-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHH
Q 039963 110 QCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW---IR-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLM 185 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~ 185 (578)
|++|.||++++|+|++ +++||||||||... +. +||+|+|||++++.. +..|+|++|+++||+..+
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC------
Confidence 9999999999999997 89999999999974 22 499999999988753 245799999999998762
Q ss_pred HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCC-cEEEEEeCceeEEEeecCcccceeE
Q 039963 186 QAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQ-ELFFGVANHNLTVVGVDTSYTKAFS 264 (578)
Q Consensus 186 ~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~ 264 (578)
+ ..++.++|||+.+++ ....+++++|++|||||+|++... .|+|||+||.|+|++.++....+..
T Consensus 177 -----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~ 242 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEY 242 (288)
T ss_dssp -----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEE
T ss_pred -----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCce
Confidence 1 135799999998621 124689999999999999999544 6899999999999984443336789
Q ss_pred eeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEe
Q 039963 265 TSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAY 314 (578)
Q Consensus 265 ~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y 314 (578)
+|++.|.||||++|+++++ .||.|.++||..... ..++.+.+++
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~~H~-----~~GM~~~~~V 286 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFP-YPGKFMFHAHKTEFA-----ELGWMGFFEV 286 (288)
T ss_dssp ESEEEEETTCEEEEEECCC-SCEEEEEECSSHHHH-----TTTCEEEEEE
T ss_pred eeEEEeCCCceEEEEEECC-CCEEEEEEecChHHH-----hcCCCEEEEE
Confidence 9999999999999999999 789999999964322 2355555554
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.3e-46 Score=436.84 Aligned_cols=401 Identities=16% Similarity=0.198 Sum_probs=264.7
Q ss_pred eeeeEEEECCcCCC--ceEEEecCCEEEEEEEeCCCCceeEEecccccCC-CCCCCCCCcccccccCCCCeEEEEEEecC
Q 039963 51 RTHNTVTVNGQFPG--PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKG-NPWADGPEYVTQCPIQPGRSYTYQFTIEG 127 (578)
Q Consensus 51 ~~~~~~~~NG~~Pg--P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~~~~~~ 127 (578)
..+.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.|+||++..+ |+|.||.+++|.|++ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 57789999999999 889999999999999976 4459999999988 88999999998 999999999999987 6
Q ss_pred CCcceeEeccccccc-ccceEEEEEecCCCCCCCCCCCCCceeeee----cccccCChHHHHHHHH-hcCCCCCCCceEE
Q 039963 128 QEGTLWWHAHSRWIR-ATVYGAIIIYPRIGSSYPFPVPNREIPILL----GEWWDKNPMDVLMQAI-FTGAAPNVSDAFT 201 (578)
Q Consensus 128 ~~Gt~~YH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~l 201 (578)
++||||||||...++ +||.|.++|++......++..++.|.++++ +||++........+.. ..+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999877 599999999987654455557788888888 8999877665433221 11211 22222
Q ss_pred EcCcCCC----------------CCCC----------CCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEee
Q 039963 202 INGQPGD----------------LYRC----------SRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGV 255 (578)
Q Consensus 202 iNG~~~~----------------~~~~----------~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~ 255 (578)
+|+.... .+.- .+.+.|.|++++||++++|++|.. ...+.||.||.. +...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HGl~--~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ--TESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESSCB--CSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeecccc--ccCC
Confidence 3322110 0110 123458999999999999999996 566778887743 3222
Q ss_pred cCcccceeEeeEEEEccCceEEEEEEeCCC---------CceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCC
Q 039963 256 DTSYTKAFSTSVIMIAPGQTTNVLLTADQP---------PARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGS 326 (578)
Q Consensus 256 DG~~~~p~~~d~v~l~pger~dv~v~~~~~---------~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~ 326 (578)
| ...+.||++++..+.+.+. +|.|++++|... . ... ..+..+.|.+.....
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~-~-~q~-~~GL~G~liV~~~~~------- 904 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQ-V-KDL-YSGLIGPLIVCRRPY------- 904 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTH-H-HHH-HTTCEEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCCh-H-Hhh-hccccceeEecCccc-------
Confidence 2 1246799998888887642 259999998431 1 011 123444454443211
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhcccccCCCCCCCCccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecC
Q 039963 327 NSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEF 406 (578)
Q Consensus 327 ~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~ 406 (578)
. . +...+...|..+.+.. +.. +.. .....|+.+|..
T Consensus 905 -l-----~----------------------~~~~~~d~D~~l~~~~-~d~--------------~~~-~y~~~n~~~~~~ 940 (1065)
T 2j5w_A 905 -L-----K----------------------VFNPRRKLEFALLFLV-FDE--------------NES-WYLDDNIKTYSD 940 (1065)
T ss_dssp --------------------------------CCCCEEEEEEEEEE-EEG--------------GGS-TTHHHHHHHHCS
T ss_pred -c-----c----------------------ccCCCcceEEEEEEEe-ecC--------------Ccc-eeeccCcccccC
Confidence 0 0 0001111222222211 100 000 000112222220
Q ss_pred -CCcchhhhhhccCCCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccC
Q 039963 407 -PTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHG 485 (578)
Q Consensus 407 -p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG 485 (578)
|...+++...+.. .+..+..+|. .......+.++.|++|+|+|.|.+. ....|||||||
T Consensus 941 ~P~~v~~~~~~~~~------------~~~~~~iNG~-------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG 1000 (1065)
T 2j5w_A 941 HPEKVNKDDEEFIE------------SNKMHAINGR-------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHG 1000 (1065)
T ss_dssp CGGGCCTTCHHHHH------------HTEEEEETTB-------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESS
T ss_pred CccccCcchhhhhc------------cCceEEECCc-------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcc
Confidence 0000111100000 0000000110 0112345789999999999999752 25789999999
Q ss_pred CceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCcc
Q 039963 486 HEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDE 563 (578)
Q Consensus 486 ~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 563 (578)
|.|+|++.+ |.+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|+|.+...
T Consensus 1001 ~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1001 HSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp CCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred cEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 999998652 6799999999999999999999999999999999999999999999987543
No 26
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.7e-44 Score=367.65 Aligned_cols=241 Identities=18% Similarity=0.309 Sum_probs=201.0
Q ss_pred cccccceeEEEE-EEEeeecCCc-eeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCC
Q 039963 29 SLSHAEIQFHEF-IEAKPVKRLC-RTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPE 106 (578)
Q Consensus 29 ~~a~~~~~~~~l-~~~~~~~~~g-~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~ 106 (578)
..+.+.++.++| +++. ++| ..+.++.+||++|||+||+++||+|+|+|+|++++++||||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 455677888999 7643 455 4456678899999999999999999999999999999999999998654 89997
Q ss_pred cccccccCCCCeEEEEEEec------------CCCcceeEeccccccc-------ccceEEEEEecCCCCCCCCCCCCCc
Q 039963 107 YVTQCPIQPGRSYTYQFTIE------------GQEGTLWWHAHSRWIR-------ATVYGAIIIYPRIGSSYPFPVPNRE 167 (578)
Q Consensus 107 ~~~~~~i~PG~~~~y~~~~~------------~~~Gt~~YH~h~~~~~-------~Gl~G~liV~~~~~~~~~~~~~d~e 167 (578)
.+||+|.||++++|+|++. .++||||||||..++. +||+|+|||+++... .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5899999999999999762 3679999999987652 399999999998752 45899
Q ss_pred eeeeecccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeC
Q 039963 168 IPILLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVAN 247 (578)
Q Consensus 168 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~g 247 (578)
++|+++|| ++||+.+ ...+.+.++.||+|||||+|++ ...++|||+|
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~-------~~~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPA-------HTGPDFEATVGDRVEFVMITHG-EYYHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCT-------TCCCCEEEETTCEEEEEEEEES-SCCEEEEETT
T ss_pred ceeeccch-------------------------hcccCCc-------ccccccccccCCEEEEEEeccc-ccceeeeecC
Confidence 99999986 4677765 2346799999999999999999 5678999999
Q ss_pred ceeEEEeecCccc---ceeEeeEEEEccCceEEEEEEeCC--CCceeEEEEeecccccccCCCcceEEEEEeccCC
Q 039963 248 HNLTVVGVDTSYT---KAFSTSVIMIAPGQTTNVLLTADQ--PPARYYMAARAYNSANVAFDNTTTTAILAYKSAP 318 (578)
Q Consensus 248 h~~~via~DG~~~---~p~~~d~v~l~pger~dv~v~~~~--~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (578)
|.|++++.||... .+..+|++.|.||||++++|.+.+ +||.|++|||..... ..++.+++.+....
T Consensus 203 h~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~-----~~GM~~~f~V~~~d 273 (313)
T 3tas_A 203 HRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKKPD 273 (313)
T ss_dssp CCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECTT
T ss_pred CeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH-----HCCCeEEEEEECCC
Confidence 9999999998765 478899999999999999998764 589999999964332 24677777776543
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.5e-44 Score=361.78 Aligned_cols=240 Identities=18% Similarity=0.268 Sum_probs=200.2
Q ss_pred ccccceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcc
Q 039963 30 LSHAEIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYV 108 (578)
Q Consensus 30 ~a~~~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 108 (578)
.+.+.+|+|+| +++... +.....++++||++|||+||+++||+|+|+|+|.++.+++|||||+.+.. ++||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~~--~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLAD--GQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECTT--SCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CCcceEEEEEEEEEeCCC--CceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-C
Confidence 45788999999 998652 33445678899999999999999999999999999999999999999876 499999 8
Q ss_pred cccccCCCCeEEEEEEecC------------CCcceeEeccccc------cc-ccceEEEEEecCCCCCCCCCCCCCcee
Q 039963 109 TQCPIQPGRSYTYQFTIEG------------QEGTLWWHAHSRW------IR-ATVYGAIIIYPRIGSSYPFPVPNREIP 169 (578)
Q Consensus 109 ~~~~i~PG~~~~y~~~~~~------------~~Gt~~YH~h~~~------~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~ 169 (578)
+||+|.||++++|+|++.+ ++||||||||.++ +. +||+|+|||++++.. .+|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceE
Confidence 9999999999999999843 3799999999975 22 499999999998753 2389999
Q ss_pred eeecccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCce
Q 039963 170 ILLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHN 249 (578)
Q Consensus 170 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~ 249 (578)
+++++| +|||+.+ .+.+.++++.|++|||||+|.+. ..++||||||.
T Consensus 152 l~l~~~-------------------------~iNG~~~-------~~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFNDM-------------------------TINNRKP-------HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHR 198 (276)
T ss_dssp EEEETT-------------------------EETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred EEeccc-------------------------ccceecc-------cCCCCEEEecCCEEEEEEecCCC-cceeEEEccce
Confidence 988763 8999976 24578999999999999999995 68999999999
Q ss_pred eEEEeecCccc----ceeEeeEEEEccCceEEEEEEeCC--CCceeEEEEeecccccccCCCcceEEEEEeccCC
Q 039963 250 LTVVGVDTSYT----KAFSTSVIMIAPGQTTNVLLTADQ--PPARYYMAARAYNSANVAFDNTTTTAILAYKSAP 318 (578)
Q Consensus 250 ~~via~DG~~~----~p~~~d~v~l~pger~dv~v~~~~--~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (578)
|++++ ||... .+..+|++.|.|||++++++++++ +||.|++|||..... ..++.+.+++....
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~-----~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKKPD 267 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECTT
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHh-----hCCCeEEEEEeCCC
Confidence 99976 66543 246899999999999999999985 689999999964322 24667777776543
No 28
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=4.7e-44 Score=361.65 Aligned_cols=241 Identities=19% Similarity=0.317 Sum_probs=197.1
Q ss_pred ccccceeEEEE-EEEeeecCCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcc
Q 039963 30 LSHAEIQFHEF-IEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYV 108 (578)
Q Consensus 30 ~a~~~~~~~~l-~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 108 (578)
.+.+.+++++| +++..-. ...+.++.+||++|||+||+++||+|+|+|+|++++++||||||+.+... +||++ +
T Consensus 24 ~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~ 98 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDE--LYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-M 98 (299)
T ss_dssp ---CCEEEEEEEEEEEETT--EEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred ccCCCEEEEEEEEEecCCC--ceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-c
Confidence 45778899999 8865432 23445667799999999999999999999999999999999999987654 99996 8
Q ss_pred cccccCCCCeEEEEEEec------------CCCcceeEeccccccc-------ccceEEEEEecCCCCCCCCCCCCCcee
Q 039963 109 TQCPIQPGRSYTYQFTIE------------GQEGTLWWHAHSRWIR-------ATVYGAIIIYPRIGSSYPFPVPNREIP 169 (578)
Q Consensus 109 ~~~~i~PG~~~~y~~~~~------------~~~Gt~~YH~h~~~~~-------~Gl~G~liV~~~~~~~~~~~~~d~e~~ 169 (578)
+||+|+||++++|+|+++ .++||||||||..++. .||+|+|||+++... .+|+|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999873 2689999999987643 399999999988742 4589999
Q ss_pred eeecccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCce
Q 039963 170 ILLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHN 249 (578)
Q Consensus 170 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~ 249 (578)
+++++| .+||+.. .+.+.+.++.||+|||||+|++. ..++|||+||.
T Consensus 174 l~~~~~-------------------------~~Ng~~~-------~~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~ 220 (299)
T 3t9w_A 174 VVFNDM-------------------------MINNRAH-------HDAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHR 220 (299)
T ss_dssp EEEETT-------------------------EETTCCT-------TCCCEEEEETTCEEEEEEEEESS-CCCEEEETTCC
T ss_pred eeeeee-------------------------eecCccc-------cccccceecCCCEEEEEEEeccc-cceeeeEecce
Confidence 998765 3788765 35588999999999999999994 66899999999
Q ss_pred eEEEeecCccc---ceeEeeEEEEccCceEEEEEEeCC--CCceeEEEEeecccccccCCCcceEEEEEeccCC
Q 039963 250 LTVVGVDTSYT---KAFSTSVIMIAPGQTTNVLLTADQ--PPARYYMAARAYNSANVAFDNTTTTAILAYKSAP 318 (578)
Q Consensus 250 ~~via~DG~~~---~p~~~d~v~l~pger~dv~v~~~~--~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (578)
|+++..++... .+..+|++.|.||||++++|.+.+ +||.|+++||..... ..++.+++.+....
T Consensus 221 F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~-----~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 221 WLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHS-----DMGMAGMFLVRNAD 289 (299)
T ss_dssp EESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECTT
T ss_pred EEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHH-----hcCCeEEEEEECCC
Confidence 99999888765 345789999999999999987653 589999999964332 24667777776543
No 29
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2e-43 Score=378.11 Aligned_cols=265 Identities=20% Similarity=0.247 Sum_probs=219.2
Q ss_pred ccccceeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC--CceeEEecccccCCCCCCCCC
Q 039963 30 LSHAEIQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ--YNITLHWHGVNLKGNPWADGP 105 (578)
Q Consensus 30 ~a~~~~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DG~ 105 (578)
.+.+.+++|+| +++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 45678899999 99999884 899999999999999999999999999999999986 599999999874 6887
Q ss_pred CcccccccCCCCeEEEEEEecCCCcceeEeccccc---cc-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChH
Q 039963 106 EYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW---IR-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPM 181 (578)
Q Consensus 106 ~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~ 181 (578)
+..+ +|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++. .+.+|+|++|+++||++....
T Consensus 98 ~~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~----~~~~d~e~~l~l~d~~~~~~~ 170 (442)
T 2zoo_A 98 AESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG----LAPVDREYYLVQGDFYTKGEF 170 (442)
T ss_dssp GGGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCT
T ss_pred CccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC----CCCCCceEEEEeeeeeccCcc
Confidence 6543 69999999999997 78999999998643 33 49999999998753 235689999999999886531
Q ss_pred HH-----HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeec
Q 039963 182 DV-----LMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVD 256 (578)
Q Consensus 182 ~~-----~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~D 256 (578)
.. ....... ...+++++|||+.++.. ..+.+++++|++|||||+|+|....+.|||+||.|+||+.|
T Consensus 171 ~~~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 171 GEAGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp TCCEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cccccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 10 0000001 13568999999986321 12579999999999999999988899999999999999999
Q ss_pred CcccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 257 TSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 257 G~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
|.+++|..++++.|.||||+||+|+++ .+|.|+++|+.+... ...+..++++|.+...
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccc----cccCceEEEEecCCCC
Confidence 999999999999999999999999999 589999999965431 1346789999987654
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.2e-42 Score=358.14 Aligned_cols=271 Identities=18% Similarity=0.181 Sum_probs=208.3
Q ss_pred ccccceeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCc
Q 039963 30 LSHAEIQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEY 107 (578)
Q Consensus 30 ~a~~~~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~ 107 (578)
.+.+++++|+| +++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 44667899999 99998877 5999999999999999999999999999999999 5789999999876544555556
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeEeccccc-----cc-ccceEEEEEecCCCCCCC--C-CCCCCceeeeecccccC
Q 039963 108 VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW-----IR-ATVYGAIIIYPRIGSSYP--F-PVPNREIPILLGEWWDK 178 (578)
Q Consensus 108 ~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~-----~~-~Gl~G~liV~~~~~~~~~--~-~~~d~e~~l~~~d~~~~ 178 (578)
+++ |.||++++|+|++ .++||||||||.++ +. +||+|+|||++++..+.+ . ..+|+|++|+++||++.
T Consensus 104 ~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 104 LTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred eeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 664 9999999999997 78999999999974 44 499999999987542211 1 25689999999999883
Q ss_pred C--hH---------HHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeC
Q 039963 179 N--PM---------DVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVAN 247 (578)
Q Consensus 179 ~--~~---------~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~g 247 (578)
. .. ..+...... .....++.++|||+.+++. ..+.+++++||+||||++|++....+ ..+++
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~ 253 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIGG 253 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred ccccccccccccccccccchhHH-hhccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEECC
Confidence 1 11 000000000 0123568999999986321 13679999999988877766533222 34789
Q ss_pred ceeEEEeecCcccc-ee-EeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 248 HNLTVVGVDTSYTK-AF-STSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 248 h~~~via~DG~~~~-p~-~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
|.++|++ ||.+++ |. .+|++.|.||||+||+|+++ .||+|+++||..... ...++.++++|.+...
T Consensus 254 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~----~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 254 HGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEA----VHKGATAHVLVEGEWD 321 (333)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHH----HTTCCEEEEEEESCCC
T ss_pred CCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhH----hhCCCEEEEEEcCCCC
Confidence 9999999 999985 44 58999999999999999999 589999999975432 1357789999987543
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=3.6e-41 Score=347.65 Aligned_cols=269 Identities=23% Similarity=0.271 Sum_probs=201.5
Q ss_pred cccceeEEEE-EEEeeec--CCceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCc
Q 039963 31 SHAEIQFHEF-IEAKPVK--RLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEY 107 (578)
Q Consensus 31 a~~~~~~~~l-~~~~~~~--~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~ 107 (578)
+.+++++|+| +++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 3567899999 9887765 5699999999999999999999999999999999974 34455554444445667666
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeEecccccc----c-ccceEEEEEecCCCCCCCC---CCCCCceeeeecccccCC
Q 039963 108 VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWI----R-ATVYGAIIIYPRIGSSYPF---PVPNREIPILLGEWWDKN 179 (578)
Q Consensus 108 ~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~----~-~Gl~G~liV~~~~~~~~~~---~~~d~e~~l~~~d~~~~~ 179 (578)
+++ |.||++++|+|++ +++||||||||.++. . +||+|+|||++++....+. ..+|+|++|+++||++..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 665 9999999999998 789999999998753 3 4999999999876422111 246899999999998741
Q ss_pred h--HH---------HHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEE-EEeC
Q 039963 180 P--MD---------VLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFF-GVAN 247 (578)
Q Consensus 180 ~--~~---------~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~-~l~g 247 (578)
. .. ........ .....++.++|||+.+++. ..+.+++++|++||| +|++..+.+.+ .++|
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~g 253 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGG 253 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTC
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECC
Confidence 1 00 00000000 0113468999999986321 136799999997765 56665555544 4699
Q ss_pred ceeEEEeecCccccee--EeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 248 HNLTVVGVDTSYTKAF--STSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 248 h~~~via~DG~~~~p~--~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
|.|+|++ ||.+++|. .++++.|+||||+||+|++++ ||.|+++||..... ...++.|+++|.+...
T Consensus 254 h~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 254 HGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred cCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCCC
Confidence 9999997 99998653 478999999999999999995 89999999964321 1347789999987654
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2.9e-41 Score=348.92 Aligned_cols=270 Identities=19% Similarity=0.224 Sum_probs=204.0
Q ss_pred ccccceeEEEE-EEEeeecC--CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCC
Q 039963 30 LSHAEIQFHEF-IEAKPVKR--LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPE 106 (578)
Q Consensus 30 ~a~~~~~~~~l-~~~~~~~~--~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~ 106 (578)
.+.+++++|+| +++..++. ||+.+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 34677899999 99888774 59999999999999999999999999999999998 67899998876543344444
Q ss_pred cccccccCCCCeEEEEEEecCCCcceeEeccccc----cc-ccceEEEEEecCCCCC----CCCCCCCCceeeeeccccc
Q 039963 107 YVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW----IR-ATVYGAIIIYPRIGSS----YPFPVPNREIPILLGEWWD 177 (578)
Q Consensus 107 ~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~~~d~~~ 177 (578)
.+++ |.||++++|+|++ .++||||||||.++ +. +||+|+|||++++... .+. .+|+|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 5554 9999999999998 67999999999874 33 5999999999875311 122 468999999999987
Q ss_pred C--ChH---------HHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEe
Q 039963 178 K--NPM---------DVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVA 246 (578)
Q Consensus 178 ~--~~~---------~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~ 246 (578)
. ... ......... .....++.++|||+.+... ..+.+++++|+++||++.|.+. ..+..+++
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~r~Rl~n~~~~~-~~~~~~i~ 258 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALT-----GDHALTAAVGERVLVVHSQANR-DTRPHLIG 258 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSS-CBCEEEET
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCcc-----CCCceEcCCCCEEEEEECCCCC-ccceEEec
Confidence 3 111 011100000 0113468999999986321 1478999999988876666552 23344589
Q ss_pred CceeEEEeecCcccc-ee-EeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 247 NHNLTVVGVDTSYTK-AF-STSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 247 gh~~~via~DG~~~~-p~-~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
+|.|+|++ ||.++. |. .+|++.|.||||+||+|++++ ||+|+++||..... ...+..++++|.+...
T Consensus 259 gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 259 GHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred CcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCCc
Confidence 99999997 999874 43 589999999999999999995 89999999975211 1246778999987554
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=3.3e-40 Score=339.59 Aligned_cols=237 Identities=18% Similarity=0.280 Sum_probs=192.0
Q ss_pred ccceeEEEE-EEEeeecCCceeee-EEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCccc
Q 039963 32 HAEIQFHEF-IEAKPVKRLCRTHN-TVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVT 109 (578)
Q Consensus 32 ~~~~~~~~l-~~~~~~~~~g~~~~-~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~ 109 (578)
.+++++|+| +++.. +|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+.+. .++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~~---~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKLA---DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEECG---GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TT
T ss_pred CCeEEEEEEEEEEcc---CCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-cc
Confidence 356689999 88753 453221 1234899999999999999999999999999999999999986 3599998 88
Q ss_pred ccccCCCCeEEEEEEecC------------CCcceeEeccccc------cc-ccceEEEEEecCCCCCCCCCCCCCceee
Q 039963 110 QCPIQPGRSYTYQFTIEG------------QEGTLWWHAHSRW------IR-ATVYGAIIIYPRIGSSYPFPVPNREIPI 170 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~------------~~Gt~~YH~h~~~------~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l 170 (578)
||+|.||++++|+|++.. .+|+||||||..+ +. .||+|+|||+++... .+|+|+++
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEE
Confidence 999999999999998732 3599999999743 22 499999999988652 25799999
Q ss_pred eecccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCcee
Q 039963 171 LLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNL 250 (578)
Q Consensus 171 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~ 250 (578)
+++|| +|||+.+ .+.+.++++.||+|||||+|.+. ..|+||||||.|
T Consensus 194 ~~~d~-------------------------~iNG~~~-------~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f 240 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKP-------HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 240 (343)
T ss_dssp EEETT-------------------------EETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Ecccc-------------------------eecccCC-------CCCccEEeCCCCEEEEEEEcCCc-cccccEecCcEE
Confidence 88774 7999975 23468999999999999999994 789999999999
Q ss_pred EEEeecCcccc----eeEeeEEEEccCceEEEEEEeC--CCCceeEEEEeecccccccCCCcceEEEEEeccCC
Q 039963 251 TVVGVDTSYTK----AFSTSVIMIAPGQTTNVLLTAD--QPPARYYMAARAYNSANVAFDNTTTTAILAYKSAP 318 (578)
Q Consensus 251 ~via~DG~~~~----p~~~d~v~l~pger~dv~v~~~--~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (578)
++++ +|.+.. +..+|++.|.|||+++|+++++ +.||.|++|||..... ..+..+.+++....
T Consensus 241 ~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~-----~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 241 ADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKKPD 308 (343)
T ss_dssp ESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECTT
T ss_pred EEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHH-----hccCcEEEEEecCC
Confidence 9974 675442 4678999999999999999984 3789999999964322 34677888887543
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=4.6e-40 Score=367.59 Aligned_cols=264 Identities=16% Similarity=0.196 Sum_probs=192.5
Q ss_pred cccceeEEEE-EEEeeecCC--c------------eee--eEEEE----------------CCcCCCceEEEecCCEEEE
Q 039963 31 SHAEIQFHEF-IEAKPVKRL--C------------RTH--NTVTV----------------NGQFPGPTLQVRDGDTLII 77 (578)
Q Consensus 31 a~~~~~~~~l-~~~~~~~~~--g------------~~~--~~~~~----------------NG~~PgP~i~v~~Gd~v~v 77 (578)
+.+++|+|.+ |++..|... | +.+ ....| ++++|||+|++++||+|+|
T Consensus 2 ~~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v 81 (647)
T 1sdd_B 2 NTGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQV 81 (647)
T ss_dssp CCCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEE
T ss_pred CCCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEE
Confidence 3478899999 999998665 1 111 12334 3478999999999999999
Q ss_pred EEEeCCCCceeEEecccccCCCCCCCCCCccc--------ccccCCCCeEEEEEEecCC-----Cc----ceeEeccccc
Q 039963 78 TTINRAQYNITLHWHGVNLKGNPWADGPEYVT--------QCPIQPGRSYTYQFTIEGQ-----EG----TLWWHAHSRW 140 (578)
Q Consensus 78 ~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~--------~~~i~PG~~~~y~~~~~~~-----~G----t~~YH~h~~~ 140 (578)
+|+|.++.+++|||||+++.. ++||+++++ ||+|.||++++|+|+++++ +| |||||||.+.
T Consensus 82 ~~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~ 159 (647)
T 1sdd_B 82 RFKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNP 159 (647)
T ss_dssp EECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSH
T ss_pred EEEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCC
Confidence 999999999999999999865 499999876 9999999999999998554 57 9999999975
Q ss_pred c--c-ccceEEEEEecCCCCCC--CCCCCCCceeeeec------ccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCC
Q 039963 141 I--R-ATVYGAIIIYPRIGSSY--PFPVPNREIPILLG------EWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDL 209 (578)
Q Consensus 141 ~--~-~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~~~------d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~ 209 (578)
. . +||+|+|||++++.... ..+..++|++|+++ ||+++........... ......+++++|||+.++
T Consensus 160 ~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~iNG~~~~- 237 (647)
T 1sdd_B 160 EKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS-SEVKNSHEFHAINGMIYN- 237 (647)
T ss_dssp HHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSSC-
T ss_pred cccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-cchhhcCceeccCCEecC-
Confidence 3 3 49999999999865321 12334689999998 7887654321000000 111234689999999752
Q ss_pred CCCCCCceeEEEEecCcEEEEEEEEcCCCC-cEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCCCce
Q 039963 210 YRCSRRETVRFQVEAGETVLLRIINAAMNQ-ELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPAR 288 (578)
Q Consensus 210 ~~~~~~~~~~l~v~~G~~~rlrliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~~G~ 288 (578)
.+.+++++|++|||||+|++... .+.||+|||.|++++.|| ..+|++.|.||||+||+|+++ .||.
T Consensus 238 -------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG~ 304 (647)
T 1sdd_B 238 -------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPGW 304 (647)
T ss_dssp -------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSEE
T ss_pred -------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cceE
Confidence 36799999999999999999764 899999999999999886 478999999999999999999 5799
Q ss_pred eEEEEeecccccccCCCcceEEEEEecc
Q 039963 289 YYMAARAYNSANVAFDNTTTTAILAYKS 316 (578)
Q Consensus 289 y~i~~~~~~~~~~~~~~~~~~ail~y~~ 316 (578)
|++|||..... ..++.+.+.+..
T Consensus 305 w~~hch~~~h~-----~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 305 WLLDTEVGEIQ-----RAGMQTPFLIVD 327 (647)
T ss_dssp EEEECCCHHHH-----TTTCEEEEEEEC
T ss_pred eecccCccccc-----ccccccceeeec
Confidence 99999974332 235566666643
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=8.1e-42 Score=347.08 Aligned_cols=229 Identities=16% Similarity=0.239 Sum_probs=162.6
Q ss_pred eEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCC----CCCCCCCCccc--ccccCCCCeEEEEEEecC
Q 039963 54 NTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKG----NPWADGPEYVT--QCPIQPGRSYTYQFTIEG 127 (578)
Q Consensus 54 ~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~----~~~~DG~~~~~--~~~i~PG~~~~y~~~~~~ 127 (578)
+.+++| ++|||+|++++||+|+|+|+|.++.+++|||||+.... .++.||+++++ ||+|.||++++|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 445678 58999999999999999999999999999999999543 33344444444 799999999999999854
Q ss_pred C---------CcceeEeccccccc---ccceEEEEEecCCCCC-CC-CCCCCCceeeeecccccCChHHHHHHHHhcCCC
Q 039963 128 Q---------EGTLWWHAHSRWIR---ATVYGAIIIYPRIGSS-YP-FPVPNREIPILLGEWWDKNPMDVLMQAIFTGAA 193 (578)
Q Consensus 128 ~---------~Gt~~YH~h~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~~~d~~~~~~~~~~~~~~~~g~~ 193 (578)
+ +||||||||....+ +||+|+|||+++.... .+ ....|+|++|+++||..... ..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~-----------~~ 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS-----------WN 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS-----------SS
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc-----------cc
Confidence 4 37999999987633 4999999999875321 11 12458999999999742210 01
Q ss_pred CCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCC-CcEEEEEeCceeEEEeecCcccceeEeeEEEEcc
Q 039963 194 PNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMN-QELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAP 272 (578)
Q Consensus 194 ~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~p 272 (578)
...++.++|||+.+ ...+.+++++|+++||||+|++.. ..+.||+|||.|.+ || ..+|++.|.|
T Consensus 198 ~~~~~~~~ING~~~-------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~p 262 (306)
T 1sdd_A 198 QTSSLMYTVNGYVN-------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVS 262 (306)
T ss_dssp CCCCEEECSSSCCS-------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEET
T ss_pred cCCCcceeeCCEec-------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECC
Confidence 12357899999985 224678999999999999999976 56789999999986 77 3589999999
Q ss_pred CceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEec
Q 039963 273 GQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYK 315 (578)
Q Consensus 273 ger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~ 315 (578)
|||+||+|+++ .||.|+++||..... ..++.+.+++.
T Consensus 263 ger~~v~~~~~-~pG~~~~hch~~~H~-----~~GM~~~~~V~ 299 (306)
T 1sdd_A 263 ATSTTANMTVS-PEGRWTIASLIPRHF-----QAGMQAYIDIK 299 (306)
T ss_dssp TCCBC---------CCCCCBCCSTTTG-----GGTCBCCC---
T ss_pred CcEEEEEEEcC-CCeEEEEEeCChHHH-----hcCCeEEEEEe
Confidence 99999999998 689999999964332 23445555554
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.1e-38 Score=338.58 Aligned_cols=260 Identities=23% Similarity=0.292 Sum_probs=209.5
Q ss_pred ccceeEEEE-EEEeeecC-CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCC--CceeEEecccccCCCCCCCCCCc
Q 039963 32 HAEIQFHEF-IEAKPVKR-LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ--YNITLHWHGVNLKGNPWADGPEY 107 (578)
Q Consensus 32 ~~~~~~~~l-~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DG~~~ 107 (578)
.+.++.++| +++..... +|....+|+|||++|||+|++++||+++|+|.|.++ ..++|||||+.. +||++.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 345667888 77666655 688999999999999999999999999999999985 679999999853 688876
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeEeccccc---cc-ccceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHH
Q 039963 108 VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW---IR-ATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDV 183 (578)
Q Consensus 108 ~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~ 183 (578)
.++ |.|||+++|.|++ +++|+||||||... +. .||+|+|+|+++.. ++.+|+|+++++++|++......
T Consensus 235 ~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~ 307 (447)
T 2dv6_A 235 FTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGT 307 (447)
T ss_dssp GCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTC
T ss_pred cEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccc
Confidence 544 9999999999997 67899999999742 22 49999999998653 23568899999999986531100
Q ss_pred -------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeec
Q 039963 184 -------LMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVD 256 (578)
Q Consensus 184 -------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~D 256 (578)
..... + ..++.++|||+.++... ...+++++|++|||||+|++....|.|||+||.|+||+.|
T Consensus 308 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d 377 (447)
T 2dv6_A 308 SGEQEMDYEKLI--N---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL 377 (447)
T ss_dssp CEECCBBHHHHH--T---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG
T ss_pred cccccCChHHhh--c---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC
Confidence 01111 1 23578999999874311 1468999999999999999988899999999999999999
Q ss_pred Ccccc-ee-EeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCC
Q 039963 257 TSYTK-AF-STSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPC 319 (578)
Q Consensus 257 G~~~~-p~-~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (578)
|.++. |. .+|++.|.||||++|+|+++ +||.|+|+||..... ..+..++++|.+...
T Consensus 378 G~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 378 GSVVSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRL-----EHGLVGFLNVDGPKN 436 (447)
T ss_dssp GCSSSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGG-----GGTCCEEEEECSCSC
T ss_pred CcccCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCcc-----ccCCEEEEEEeCCCC
Confidence 99985 44 69999999999999999999 689999999975432 346789999987543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=6.4e-40 Score=368.40 Aligned_cols=248 Identities=10% Similarity=0.099 Sum_probs=195.3
Q ss_pred cccceeEEEE-EEEeee--cCCce---------------ee--eEEEE-----CC-----------cCCCceEEEecCCE
Q 039963 31 SHAEIQFHEF-IEAKPV--KRLCR---------------TH--NTVTV-----NG-----------QFPGPTLQVRDGDT 74 (578)
Q Consensus 31 a~~~~~~~~l-~~~~~~--~~~g~---------------~~--~~~~~-----NG-----------~~PgP~i~v~~Gd~ 74 (578)
..+.+|+|.| |++..+ +++|. .+ .++.| ++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 4678999999 999886 45543 12 22333 33 68999999999999
Q ss_pred EEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecC---------CCcceeEeccccccc---
Q 039963 75 LIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEG---------QEGTLWWHAHSRWIR--- 142 (578)
Q Consensus 75 v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~---------~~Gt~~YH~h~~~~~--- 142 (578)
|+|+|+|.++.+++|||||+.+..... ||+++ +||+|+||++++|+|++++ ++||||||||.+...
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 999999999999999999999988743 69988 8999999999999999854 899999999998743
Q ss_pred ccceEEEEEecCCCCCC--CCCCCCCceeeeecc------cccCChHHHHHHHHh-cC-------CCCCCCceEEEcCcC
Q 039963 143 ATVYGAIIIYPRIGSSY--PFPVPNREIPILLGE------WWDKNPMDVLMQAIF-TG-------AAPNVSDAFTINGQP 206 (578)
Q Consensus 143 ~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~~~d------~~~~~~~~~~~~~~~-~g-------~~~~~~~~~liNG~~ 206 (578)
+||+|+|||+++..... ..+..++|++|++++ |+++..... +.. .. ......+.++|||+.
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~---~~~~p~~~~~~d~~~~~~~~~~~ING~~ 363 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMER---NCRAPCNIQMEDPTFKENYRFHAINGYI 363 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSS---CSCCSSCCCSSSSSSTTTSCEECTTSCT
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhh---cccCccccccCCccccccCCccccCCcc
Confidence 49999999999865321 123457899888753 555422110 000 00 001124578999997
Q ss_pred CCCCCCCCCceeEEEEecCcEEEEEEEEcCCC-CcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCC
Q 039963 207 GDLYRCSRRETVRFQVEAGETVLLRIINAAMN-QELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQP 285 (578)
Q Consensus 207 ~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~ 285 (578)
+ ...+.+++++|++|||||+|++.. ..|+||||||.|+|++.||. .+|++.|.||||++|+|+++ .
T Consensus 364 ~-------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~ 430 (770)
T 2r7e_B 364 M-------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-K 430 (770)
T ss_dssp T-------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-S
T ss_pred C-------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-C
Confidence 5 234678999999999999999865 47899999999999999974 89999999999999999999 6
Q ss_pred CceeEEEEeec
Q 039963 286 PARYYMAARAY 296 (578)
Q Consensus 286 ~G~y~i~~~~~ 296 (578)
||.|+|+||..
T Consensus 431 pG~w~~hcH~~ 441 (770)
T 2r7e_B 431 AGIWRVECLIG 441 (770)
T ss_dssp CBCCCBCCCSH
T ss_pred CCceEEEeccc
Confidence 89999999974
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=7.5e-37 Score=343.10 Aligned_cols=217 Identities=18% Similarity=0.267 Sum_probs=169.5
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCC-----CCCcccccccCCCCeEEEEEEecCCCc-----
Q 039963 61 QFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWAD-----GPEYVTQCPIQPGRSYTYQFTIEGQEG----- 130 (578)
Q Consensus 61 ~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~D-----G~~~~~~~~i~PG~~~~y~~~~~~~~G----- 130 (578)
.+|||+||+++||+|+|+|+|.++.+++|||||+.+. .+|+| |+++++||+|.||++++|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5899999999999999999999999999999999974 45565 566788999999999999999865554
Q ss_pred ----ceeEeccccccc---ccceEEEEEecCCCCC-CC-CCCCCCceeeeecc------cccCChHHHHHHHHh-cCCC-
Q 039963 131 ----TLWWHAHSRWIR---ATVYGAIIIYPRIGSS-YP-FPVPNREIPILLGE------WWDKNPMDVLMQAIF-TGAA- 193 (578)
Q Consensus 131 ----t~~YH~h~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~~~d------~~~~~~~~~~~~~~~-~g~~- 193 (578)
|||||||.+.++ .||+|+|||+++.... .+ ....|+|++|++++ |++.... ..+.. ....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 999999998764 3999999999875421 11 12568999999864 5543211 11110 0000
Q ss_pred ------CCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCC-CcEEEEEeCceeEEEeecCcccceeEee
Q 039963 194 ------PNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMN-QELFFGVANHNLTVVGVDTSYTKAFSTS 266 (578)
Q Consensus 194 ------~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d 266 (578)
......++|||+.+. ..+ +.+++||+|||||+|+++. ..|.|||+||.|+|+ +..+|
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~-------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~D 667 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD-------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYED 667 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS-------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBC
T ss_pred cccccccccCceeeecCcCCC-------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cccee
Confidence 001135789999751 223 8999999999999998754 468999999999986 46899
Q ss_pred EEEEccCceEEEEEEeCCCCceeEEEEeeccc
Q 039963 267 VIMIAPGQTTNVLLTADQPPARYYMAARAYNS 298 (578)
Q Consensus 267 ~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~ 298 (578)
++.|.||||++|+|+++ .||.|+++||....
T Consensus 668 tv~l~Pg~~~~v~~~ad-~pG~w~~hcH~~~H 698 (742)
T 2r7e_A 668 TLTLFPFSGETVFMSME-NPGLWILGCHNSDF 698 (742)
T ss_dssp SSCCCCCSSEECCEECC-CCCCSCCEECCCST
T ss_pred EEEECCCcEEEEEEEcC-CCeEEEEEeCCchH
Confidence 99999999999999999 68999999997543
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=1.4e-30 Score=262.10 Aligned_cols=233 Identities=17% Similarity=0.161 Sum_probs=167.7
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEE
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTN 277 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~d 277 (578)
..+++||+.- .|.|++++|+++++++.|.. ...+.+|+||.. ..+.||.+. .+...|.||++++
T Consensus 55 ~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~-~~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~ 118 (288)
T 3gdc_A 55 KGWSYNGRIP---------GPTLWAREGDALRIHFTNAG-AHPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFT 118 (288)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEECS-SSCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEE
T ss_pred EEEEECCccC---------CCcEEEeCCCEEEEEEEeCC-CCcccEEecccc--ccccCCCCC----ccceeECCCCEEE
Confidence 5899999852 38999999999999999998 567899999975 457888753 2345689999999
Q ss_pred EEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCC
Q 039963 278 VLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHE 357 (578)
Q Consensus 278 v~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p 357 (578)
+.++++ .+|.||+|||....... ...+..+.+.+..... .+
T Consensus 119 y~f~~~-~~Gt~~yH~H~~~~~~~--~~~Gl~G~liV~~~~~----------------~~-------------------- 159 (288)
T 3gdc_A 119 YEFDAT-PFGTHLYHCHQSPLAPH--IAKGLYGGFIVEPKEG----------------RP-------------------- 159 (288)
T ss_dssp EEEECC-SCEEEEEECCCSSHHHH--HHTTCEEEEEEECSSC----------------CC--------------------
T ss_pred EEEEcC-CCccEEEEecCcchHHH--HhCcCeEEEEEeCCcc----------------CC--------------------
Confidence 999997 68999999996421000 1124444454443211 00
Q ss_pred CCCCCccceEEEEEee-cccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccc
Q 039963 358 VKVPTVIDEDLFFTVG-LGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKF 436 (578)
Q Consensus 358 ~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 436 (578)
..++.+.+.+. +.. + . +...-.|++||+.|...
T Consensus 160 -----~~d~e~~l~~~d~~~-------~---~--g~~~~~~~iNG~~~~~~----------------------------- 193 (288)
T 3gdc_A 160 -----PADDEMVMVMNGYNT-------D---G--GDDNEFYSVNGLPFHFM----------------------------- 193 (288)
T ss_dssp -----CCSEEEEEEEEEECC-------S---S--TTCCSEEEETTSTTHHH-----------------------------
T ss_pred -----CCcceEEEEEeeEec-------C---C--CCCcceEEECccccccc-----------------------------
Confidence 11233333322 211 0 0 11123478888755310
Q ss_pred cCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcce
Q 039963 437 DYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRN 516 (578)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rD 516 (578)
...+.++.|++|+|++.|.+ .....||||||||.|+|++.+.. +..+.++|
T Consensus 194 ----------------~~~l~v~~Ge~vr~~l~N~g-~~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~D 244 (288)
T 3gdc_A 194 ----------------DFPVKVKQHELVRIHLINVL-EYDPINSFHIHGNFFHYYPTGTM------------LTPSEYTD 244 (288)
T ss_dssp ----------------HSCEEEETTCCEEEEEEECC-CSSSEEEEEETTCCEEEEETTCC------------SSCSEEES
T ss_pred ----------------CcccccCCCCEEEEEEEeCC-CCCcceeEEEcCCEEEEEcCCCc------------cCCCceee
Confidence 12367899999999999976 11346999999999999875421 12457999
Q ss_pred eEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEec
Q 039963 517 TIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 517 Tv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
|+.|+||+++.|+|++++||.|+||||+++|++.|||+.|+|.+
T Consensus 245 tv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 245 TISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999863
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=7e-29 Score=252.75 Aligned_cols=248 Identities=19% Similarity=0.223 Sum_probs=167.7
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEE-EeecCcccceeEeeEEEEccCceE
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTV-VGVDTSYTKAFSTSVIMIAPGQTT 276 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~v-ia~DG~~~~p~~~d~v~l~pger~ 276 (578)
..+++||+. +.|.|++++|+++++|+.|.. ...+.+|+||....- .+.||.+. .....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCC-CCceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 589999985 238999999999999999998 566799999986543 36788753 223578999999
Q ss_pred EEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCC
Q 039963 277 NVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLH 356 (578)
Q Consensus 277 dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 356 (578)
+..++++ .+|+||+|||..... .....+..+.|.+..... . + .
T Consensus 89 ~y~f~~~-~~Gt~wYH~H~~~~~--~~~~~Gl~G~lIV~~~~~--------~-----~-~-------------------- 131 (318)
T 3g5w_A 89 TYKFKAE-PAGTMWYHCHVNVNE--HVTMRGMWGPLIVEPKNP--------L-----P-I-------------------- 131 (318)
T ss_dssp EEEEECC-SCEEEEEECCSSHHH--HHHHSCCEEEEEEECSSC--------C-----H-H--------------------
T ss_pred EEEEEcC-CCEEEEEEccCChhh--hhccCCCEEEEEEcCCCc--------c-----c-c--------------------
Confidence 9999998 689999999962110 000123444444433211 0 0 0
Q ss_pred CCCCCCccceEEEEEee-cccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCcc
Q 039963 357 EVKVPTVIDEDLFFTVG-LGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIK 435 (578)
Q Consensus 357 p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~ 435 (578)
+...++.+.+.+. ........ ...........-.|.|||+.|.
T Consensus 132 ----~~~~d~e~~l~l~dw~~~~~~~--~~~~~~~~~~~d~~~ING~~~~------------------------------ 175 (318)
T 3g5w_A 132 ----EKTVTKDYILMLSDWVSSWANK--PGEGGIPGDVFDYYTINAKSFP------------------------------ 175 (318)
T ss_dssp ----HHTCCEEEEEEEEEECGGGTTC--TTCCCCTTCCCCEEEETTBCBT------------------------------
T ss_pred ----cccccceeEEEEEeeccccccc--cccCCCCCCcCcEEEEcCcCCC------------------------------
Confidence 0011222222211 11100000 0000000011124678876542
Q ss_pred ccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 039963 436 FDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRR 515 (578)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~r 515 (578)
.+..+.++.|++|+|+|.|.+ ...||||||||.|+|++...+. +..|.++
T Consensus 176 ----------------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~~-----------~~~p~~~ 225 (318)
T 3g5w_A 176 ----------------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGFP-----------LDKPIKG 225 (318)
T ss_dssp ----------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTEE-----------EEEEEEE
T ss_pred ----------------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCcc-----------cCCCccc
Confidence 112468899999999999976 3579999999999999985321 1246789
Q ss_pred eeEEeCCCcEEEEEEEeCCceeEEEEeechhhHh------ccceEEEEEecCc
Q 039963 516 NTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLT------WGLAMAFLVENGD 562 (578)
Q Consensus 516 DTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 562 (578)
||+.|+||+++.|+|+++|||.|+||||+++|++ .|||..++|...+
T Consensus 226 dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 226 DTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp SEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999999999999999999998 6899999986543
No 41
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=8.3e-29 Score=254.68 Aligned_cols=214 Identities=18% Similarity=0.248 Sum_probs=154.9
Q ss_pred eeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCC-----------
Q 039963 217 TVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQP----------- 285 (578)
Q Consensus 217 ~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~----------- 285 (578)
.|.|++++|+++|+||+|.. ...+.||.||..+. .+.||.++ +...|.|||+++..+++++.
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l-~~~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECC-CCCeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 38899999999999999999 45567999998877 68999864 23468899999999998742
Q ss_pred -CceeEEEEeecccc---cccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCCCCCC
Q 039963 286 -PARYYMAARAYNSA---NVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVP 361 (578)
Q Consensus 286 -~G~y~i~~~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p 361 (578)
.|.|++++|..... ......+.+..+++..+ . + .
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~--~--------------~-------------------------~- 186 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG--D--------------V-------------------------L- 186 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT--C--------------C-------------------------C-
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCC--C--------------C-------------------------C-
Confidence 37899999853211 01111222333333211 1 0 0
Q ss_pred CccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccccCCCC
Q 039963 362 TVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGN 441 (578)
Q Consensus 362 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 441 (578)
.|+.+.+.++ .|.|||+.+.
T Consensus 187 --pd~e~~l~~~----------------------d~~iNG~~~~------------------------------------ 206 (343)
T 3cg8_A 187 --PDATHTIVFN----------------------DMTINNRKPH------------------------------------ 206 (343)
T ss_dssp --CSEEEEEEEE----------------------TTEETTCCTT------------------------------------
T ss_pred --CCceEEEEcc----------------------cceecccCCC------------------------------------
Confidence 1233333221 1578886542
Q ss_pred CcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeC
Q 039963 442 VSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMP 521 (578)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp 521 (578)
..+.+.++.|++|+|+|.|.+ ...||||||||.|+|+.. |.+.. ....+.++||+.|+
T Consensus 207 ----------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~ 264 (343)
T 3cg8_A 207 ----------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITG 264 (343)
T ss_dssp ----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEEC
T ss_pred ----------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeC
Confidence 123578999999999999976 479999999999999743 33221 01235789999999
Q ss_pred CCcEEEEEEEe---CCceeEEEEeechhhHhccceEEEEEecC
Q 039963 522 PGGWVAIRFVA---NNPGIWFMHCHLDSHLTWGLAMAFLVENG 561 (578)
Q Consensus 522 p~~~~~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 561 (578)
|++++.|+|++ +|||.|+||||+++|++.|||+.|.|.+.
T Consensus 265 PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 265 PADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 307 (343)
T ss_dssp TTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred CCCEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecC
Confidence 99999999995 89999999999999999999999999764
No 42
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=5.2e-28 Score=248.96 Aligned_cols=244 Identities=19% Similarity=0.208 Sum_probs=161.8
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEe---ecCcccceeEeeEEEEccCc
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVG---VDTSYTKAFSTSVIMIAPGQ 274 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via---~DG~~~~p~~~d~v~l~pge 274 (578)
..+++||+. +.|.|++++|+++|+||+|... ..+.||.||. .+.+ .||.+. +....|.|||
T Consensus 24 ~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HG~--~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTS-LPHTIHWHGV--HQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEEESS-SCBCCEEETC--CCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCcc---------CCCeEEEECCCEEEEEEEECCC-CCccEEeCCC--CcCCCcccCCCCc----cccCccCCCC
Confidence 589999994 1289999999999999999984 4556666664 4555 499752 2345689999
Q ss_pred eEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhccccc
Q 039963 275 TTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRS 354 (578)
Q Consensus 275 r~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 354 (578)
|+++.++++ .+|+||+|||..... .....+..+-+.+..... . + .+
T Consensus 88 ~~~y~f~~~-~~Gt~wyH~H~~~~~--q~~~~Gl~G~liV~p~~~--------~-----~-~~----------------- 133 (339)
T 2zwn_A 88 SYTYKFKAD-RIGTLWYHCHVNVNE--HVGVRGMWGPLIVDPKQP--------L-----P-IE----------------- 133 (339)
T ss_dssp EEEEEEECC-SCEEEEEECCSSHHH--HTTTSCCEEEEEEECSSC--------C-----T-TG-----------------
T ss_pred eEEEEEECC-CCEEEEEEecCCchh--hhhcCCceEeEEecCCCc--------c-----c-cc-----------------
Confidence 999999998 689999999953210 111023333333332111 0 0 00
Q ss_pred CCCCCCCCccceEEEEEee-cccccCCCCCCCCccCCCC-CeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCC
Q 039963 355 LHEVKVPTVIDEDLFFTVG-LGLINCSNPNSPRCQGPNG-TRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVP 432 (578)
Q Consensus 355 l~p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g-~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~ 432 (578)
...++.+.+.+. ........ .. ..+..+ ..-.|.+||+.+.
T Consensus 134 -------~~~d~e~~l~l~d~~~~~~~~-~~--~~g~~~~~~~~~~ING~~~~--------------------------- 176 (339)
T 2zwn_A 134 -------KRVTKDVIMMMSTWESAVADK-YG--EGGTPMNVADYFSVNAKSFP--------------------------- 176 (339)
T ss_dssp -------GGCSEEEEEEEEEECGGGTTC-TT--CCCSTTSCCCEEEETTBCTT---------------------------
T ss_pred -------ccCCceEEEEeeheecccccc-cC--CCCCCccccceEEEccccCC---------------------------
Confidence 011222222211 10000000 00 000000 1123567775432
Q ss_pred CccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCC
Q 039963 433 PIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDP 512 (578)
Q Consensus 433 p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 512 (578)
...++.++.|++++|+|.|.+ ...||||||||+|+|++..... +.+|
T Consensus 177 -------------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~~-----------~~~p 223 (339)
T 2zwn_A 177 -------------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGLP-----------LDSP 223 (339)
T ss_dssp -------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTEE-----------EEEE
T ss_pred -------------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCee-----------cCCC
Confidence 123478899999999999976 4589999999999999985321 1236
Q ss_pred CcceeEEeCCCcEEEEEEEeCCceeEEEEeechhh------HhccceEEEEEecC
Q 039963 513 PRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSH------LTWGLAMAFLVENG 561 (578)
Q Consensus 513 ~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~ 561 (578)
.++||+.|+||+++.|+|++++||.|++|||+++| ++.||++.+.|...
T Consensus 224 ~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 224 YYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred cEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 78999999999999999999999999999999999 88999999998653
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=4.7e-28 Score=242.11 Aligned_cols=217 Identities=17% Similarity=0.238 Sum_probs=158.5
Q ss_pred eeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCC------------
Q 039963 217 TVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQ------------ 284 (578)
Q Consensus 217 ~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~------------ 284 (578)
.|.|++++|+++++++.|.. ....++|.||..+.. ..||..+ ..-.|.||+++...+++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 48999999999999999997 677799999987654 5788752 2345889999999999975
Q ss_pred CCceeEEEEeeccccc-ccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCCCCCCCc
Q 039963 285 PPARYYMAARAYNSAN-VAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPTV 363 (578)
Q Consensus 285 ~~G~y~i~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~ 363 (578)
.+|.|++|||...... ......+..+-|.+..... . .
T Consensus 108 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----------------------------------------~--~ 145 (276)
T 3kw8_A 108 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----------------------------------------V--L 145 (276)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------------------------------C--C
T ss_pred CCEEEEEecCccccccchhhhhCccEEEEEEecCCC----------------------------------------c--c
Confidence 2589999999632110 0001123444444433211 0 0
Q ss_pred cceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccccCCCCCc
Q 039963 364 IDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVS 443 (578)
Q Consensus 364 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~ 443 (578)
.|+.+.+.++ .|.|||+.|.
T Consensus 146 ~drE~~l~l~----------------------~~~iNG~~~~-------------------------------------- 165 (276)
T 3kw8_A 146 PDATHTIVFN----------------------DMTINNRKPH-------------------------------------- 165 (276)
T ss_dssp CSEEEEEEEE----------------------TTEETTCCTT--------------------------------------
T ss_pred cccceEEEec----------------------ccccceeccc--------------------------------------
Confidence 1344443322 1578887553
Q ss_pred ccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCC
Q 039963 444 RVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPG 523 (578)
Q Consensus 444 ~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~ 523 (578)
..+.+.++.|++|+|+|.|.+ ...||||||||.|+|++. |.++.. ...+.++||+.|+|+
T Consensus 166 --------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v~pg 225 (276)
T 3kw8_A 166 --------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKITGPA 225 (276)
T ss_dssp --------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEECTT
T ss_pred --------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEecc--CccCCC-------cccccCCccEEeCCC
Confidence 123578899999999999976 469999999999999753 333211 113468999999999
Q ss_pred cEEEEEEEeC---CceeEEEEeechhhHhccceEEEEEecCc
Q 039963 524 GWVAIRFVAN---NPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 524 ~~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
+++.++|+++ |||.|+||||+++|++.|||+.|+|.+..
T Consensus 226 ~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 226 DSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp CEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred ceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 9999999997 89999999999999999999999998763
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=4.2e-28 Score=244.90 Aligned_cols=218 Identities=19% Similarity=0.280 Sum_probs=153.5
Q ss_pred ceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCC-----------
Q 039963 216 ETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQ----------- 284 (578)
Q Consensus 216 ~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~----------- 284 (578)
+.|.|++++|++++++|.|.. ....+||.||..+. -+.||..+. .-.|.|||+++..++++.
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l-~~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTT-DRVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECC-CCCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 348999999999999999998 56678999998665 367887541 124789999999998762
Q ss_pred -CCceeEEEEeeccccccc-CCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCCCCCCC
Q 039963 285 -PPARYYMAARAYNSANVA-FDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPT 362 (578)
Q Consensus 285 -~~G~y~i~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~ 362 (578)
.+|.||++||........ .-..+..+.|.+..... .
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~------------------------------------------~ 166 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD------------------------------------------L 166 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------------------------------------------C
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEecccc------------------------------------------c
Confidence 459999999853221100 00123444444432111 0
Q ss_pred ccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccccCCCCC
Q 039963 363 VIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNV 442 (578)
Q Consensus 363 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 442 (578)
..|+.+.+.++. |.+|++.+.
T Consensus 167 ~~d~e~~l~~~~----------------------~~~Ng~~~~------------------------------------- 187 (299)
T 3t9w_A 167 LPKRQFTVVFND----------------------MMINNRAHH------------------------------------- 187 (299)
T ss_dssp CCSEEEEEEEET----------------------TEETTCCTT-------------------------------------
T ss_pred Cccccceeeeee----------------------eeecCcccc-------------------------------------
Confidence 113444443321 456765331
Q ss_pred cccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCC
Q 039963 443 SRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPP 522 (578)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp 522 (578)
..+.+.++.|++|+|++.|.+ ...||||||||.|+|+..+... .....+.++||+.|.|
T Consensus 188 ---------~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~P 246 (299)
T 3t9w_A 188 ---------DAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNP 246 (299)
T ss_dssp ---------CCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCT
T ss_pred ---------ccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCC
Confidence 124578899999999999976 5689999999999998765322 1223456899999999
Q ss_pred CcEEEE---EEEeCCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 523 GGWVAI---RFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 523 ~~~~~i---rf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
++...+ +|+++|||.|+|||||++|++.|||+.|+|++.+
T Consensus 247 Ge~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 247 GVSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp TCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred ceeEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 987554 4456899999999999999999999999998753
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=2.7e-27 Score=240.76 Aligned_cols=218 Identities=17% Similarity=0.210 Sum_probs=153.9
Q ss_pred ceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCC-----------
Q 039963 216 ETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQ----------- 284 (578)
Q Consensus 216 ~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~----------- 284 (578)
+.|.|++++|++++++|.|.. ....+||.||..+.. +.||... ..-.|.||++++..+++..
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTM-DVPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 348899999999999999998 566789999986643 5788753 1123789999999987652
Q ss_pred -CCceeEEEEeeccccccc-CCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCCCCCCC
Q 039963 285 -PPARYYMAARAYNSANVA-FDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPT 362 (578)
Q Consensus 285 -~~G~y~i~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~ 362 (578)
..|.||+|||........ .-..+..+-|.+..... .
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~------------------------------------------~ 150 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD------------------------------------------V 150 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------------------------------------------B
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc------------------------------------------c
Confidence 348999999953211000 00123444444432111 0
Q ss_pred ccceEEEEEeecccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccccCCCCC
Q 039963 363 VIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNV 442 (578)
Q Consensus 363 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 442 (578)
..|+.+.+.++ .|.+|+..+.
T Consensus 151 ~~d~e~~l~~~----------------------d~t~Ng~~~~------------------------------------- 171 (313)
T 3tas_A 151 LPDRTHTIVFN----------------------DMTINNRPAH------------------------------------- 171 (313)
T ss_dssp CCSEEEEEEEE----------------------TTEETTCCTT-------------------------------------
T ss_pred cccccceeecc----------------------chhcccCCcc-------------------------------------
Confidence 12444444332 1466765332
Q ss_pred cccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCC
Q 039963 443 SRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPP 522 (578)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp 522 (578)
..+.+.++.|++|+|+|.|.+ ...||||||||.|+|+..+... .....+.++||+.|.|
T Consensus 172 ---------~~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~P 230 (313)
T 3tas_A 172 ---------TGPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGP 230 (313)
T ss_dssp ---------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECT
T ss_pred ---------cccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCC
Confidence 123467899999999999976 5689999999999998764221 1123577999999999
Q ss_pred CcEEEEEEEe---CCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 523 GGWVAIRFVA---NNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 523 ~~~~~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
++.+.+++.+ +|||.|+|||||++|++.|||+.|+|++.+
T Consensus 231 ger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 231 ADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp TCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 9998887764 589999999999999999999999998654
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.91 E-value=4.9e-26 Score=230.89 Aligned_cols=236 Identities=11% Similarity=0.073 Sum_probs=137.2
Q ss_pred EEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccc----eeEeeEEEEccCce
Q 039963 200 FTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTK----AFSTSVIMIAPGQT 275 (578)
Q Consensus 200 ~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~v~l~pger 275 (578)
.++||..+ |.|++++|+++++||.|.. ...+.||.||..+.. +.||.+.. +...+...|.|||+
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 35788776 7899999999999999987 577789999887433 57887641 12233567899999
Q ss_pred EEEEEEeCCCC---------ceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhh
Q 039963 276 TNVLLTADQPP---------ARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATAT 346 (578)
Q Consensus 276 ~dv~v~~~~~~---------G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 346 (578)
++..+++++.+ |+||+|+|..... .....+.+ ++|........ .. +..+..+
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~-q~~~GL~G-~liV~~~~~~~--------~~---~~~~~~d------ 180 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVE-DFNSGLIG-PLLICKKGTLT--------ED---GTQKMFE------ 180 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHH-HHHTTCCE-EEEEECTTCBC--------TT---SSBSSSC------
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchh-hhccCceE-EEEEccCCCCC--------cc---CCcCccc------
Confidence 99999997643 6999999952210 01122333 33333221110 00 0000000
Q ss_pred hhhcccccCCCCCCCCccceEEEEEee-cccccCCCCCCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCccc
Q 039963 347 AYTAQIRSLHEVKVPTVIDEDLFFTVG-LGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFT 425 (578)
Q Consensus 347 ~~~~~l~~l~p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~ 425 (578)
+.+.+.+. +.. +.... ......+.|||+.+..
T Consensus 181 -------------------~e~~l~~~d~d~-------~~~~~--~~~~~~~~ING~~~~~------------------- 213 (306)
T 1sdd_A 181 -------------------KQHVLMFAVFDE-------SKSWN--QTSSLMYTVNGYVNGT------------------- 213 (306)
T ss_dssp -------------------CCCCCBCCEEET-------TSSSS--CCCCEEECSSSCCSSC-------------------
T ss_pred -------------------ceEEEEEEeccc-------ccccc--cCCCcceeeCCEecCC-------------------
Confidence 00000000 000 00000 0011235677764420
Q ss_pred CCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCC
Q 039963 426 TDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTP 505 (578)
Q Consensus 426 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~ 505 (578)
.+.+.++.|++++|+|.|.+. ....||||+|||.|++ +|
T Consensus 214 ---------------------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG--------- 252 (306)
T 1sdd_A 214 ---------------------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH--------- 252 (306)
T ss_dssp ---------------------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT---------
T ss_pred ---------------------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC---------
Confidence 123567889999999999762 1357999999999986 11
Q ss_pred CCCCCCCCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecC
Q 039963 506 KFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENG 561 (578)
Q Consensus 506 ~~~~~~p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 561 (578)
..+||+.|.||+.+.|+|++++||.|+||||+++|++.|||+.|+|.+.
T Consensus 253 -------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 -------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp -------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred -------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 2589999999999999999999999999999999999999999999764
No 47
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.89 E-value=3.4e-22 Score=204.50 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=159.7
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCC-CcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceE
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMN-QELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTT 276 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~ 276 (578)
..+++||+. ..|.|++++|++++||++|.... ..+++|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 579999984 23889999999999999999753 57889999863 5788642 1248999999
Q ss_pred EEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCC
Q 039963 277 NVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLH 356 (578)
Q Consensus 277 dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 356 (578)
++.+++++ +|+||+|||........ ..+..+.+.+..... .|..
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~~~--~~Gl~G~~iV~~~~~----------------~p~~----------------- 163 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGMHI--ANGMYGLILVEPKEG----------------LPKV----------------- 163 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHH--HTTCEEEEEEECTTC----------------CCCC-----------------
T ss_pred EEEEECCC-CeEEEEEeCCCChhhhh--hcceEEEEEEecCCC----------------CCCC-----------------
Confidence 99999984 89999999953211111 123333333332111 0111
Q ss_pred CCCCCCccceEEEEEee-cccccCCC-CC--CCCcc-CCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCC
Q 039963 357 EVKVPTVIDEDLFFTVG-LGLINCSN-PN--SPRCQ-GPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPV 431 (578)
Q Consensus 357 p~~~p~~~d~~~~~~~~-~~~~~~~~-~~--~~~~~-~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~ 431 (578)
|+.+.+.++ ........ .. ..... ..+...-.+.+||+.+..
T Consensus 164 --------d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~------------------------- 210 (327)
T 1kbv_A 164 --------DKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGAL------------------------- 210 (327)
T ss_dssp --------SEEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTT-------------------------
T ss_pred --------ceEEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccCC-------------------------
Confidence 111111110 00000000 00 00000 000001123455543210
Q ss_pred CCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCC
Q 039963 432 PPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLID 511 (578)
Q Consensus 432 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 511 (578)
...+.+.++.|++++|+|.|.+ ....|+||||||.|+|++...+. ..
T Consensus 211 -------------------~~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~~------------~~ 257 (327)
T 1kbv_A 211 -------------------TGDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGGK------------LI 257 (327)
T ss_dssp -------------------SGGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CE
T ss_pred -------------------CCceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCCc------------CC
Confidence 0123578899999999999976 24689999999999999986432 23
Q ss_pred CCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhhH-hccceEEEEEecCc
Q 039963 512 PPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHL-TWGLAMAFLVENGD 562 (578)
Q Consensus 512 p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~ 562 (578)
|.++||+.|.||+++.|.|++++||.|++|||+.+|. ..||++.+.|+...
T Consensus 258 p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 258 NENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp ECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 6789999999999999999999999999999999995 89999999997654
No 48
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=1.6e-22 Score=225.81 Aligned_cols=240 Identities=13% Similarity=0.170 Sum_probs=144.2
Q ss_pred eeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccc---e-eEeeEEEEccCceEEEEEEeCCC-----Cc
Q 039963 217 TVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTK---A-FSTSVIMIAPGQTTNVLLTADQP-----PA 287 (578)
Q Consensus 217 ~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~---p-~~~d~v~l~pger~dv~v~~~~~-----~G 287 (578)
.|.|++++|+++++||.|.. .....||.||.... .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLA-SRPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCS-SSCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECC-CCceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 38999999999999999998 56678999998764 478997631 1 22345679999999999999864 57
Q ss_pred ----eeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCCCCCCCCc
Q 039963 288 ----RYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPTV 363 (578)
Q Consensus 288 ----~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~ 363 (578)
+||+|+|..... .... +..+-|.+...... ... +..|. . .
T Consensus 146 ~~c~T~wYHsH~~~~~-q~~~--GL~G~lIV~~~~~~-------~~~---~~~~~-~----------------------~ 189 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEK-DIHS--GLIGPLLICRKGTL-------DKE---TNMPV-D----------------------M 189 (647)
T ss_dssp CSEEEEEEECCSSHHH-HHTT--TCEEEEEEECTTSS-------CTT---SCCCS-S----------------------C
T ss_pred CCceEEEEccCCCCcc-cccc--cCccCEEEeeCCCc-------ccc---cCCCC-c----------------------c
Confidence 999999963111 0112 22333333222110 000 00000 0 0
Q ss_pred cceEEEEEeeccccc-CCCCCC------CCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCCCCccc
Q 039963 364 IDEDLFFTVGLGLIN-CSNPNS------PRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKF 436 (578)
Q Consensus 364 ~d~~~~~~~~~~~~~-~~~~~~------~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 436 (578)
.+..+.+. .+.... -..+.+ ............+.+||+.+.
T Consensus 190 ~e~~l~l~-~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~------------------------------- 237 (647)
T 1sdd_B 190 REFVLLFM-VFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYN------------------------------- 237 (647)
T ss_dssp CEEEEEEE-EEEGGGSSCCC---------------CCCEEEEETTBSSC-------------------------------
T ss_pred eeEEEEEE-eecCccccccccCcccccccCCcchhhcCceeccCCEecC-------------------------------
Confidence 01111111 000000 000000 000000001122345554321
Q ss_pred cCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcce
Q 039963 437 DYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRN 516 (578)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rD 516 (578)
.+.+.++.|++|+|+|.|.+. ....||||+|||.|+|++. ++.++|
T Consensus 238 ----------------~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d 283 (647)
T 1sdd_B 238 ----------------LPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLG 283 (647)
T ss_dssp ----------------CCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEES
T ss_pred ----------------CCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccc
Confidence 134678999999999999762 2358999999999999854 345899
Q ss_pred eEEeCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEec
Q 039963 517 TIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 517 Tv~vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
|+.|.||+++.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 284 ~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 284 VWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp SEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred eEEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 99999999999999999999999999999999999999999964
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=2.3e-21 Score=199.91 Aligned_cols=247 Identities=17% Similarity=0.174 Sum_probs=153.4
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCC-CCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceE
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAM-NQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTT 276 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~ 276 (578)
..+++||+. ..|.|++++|+++++|++|... ...|.+++++... +.||..+ . .|.|||++
T Consensus 60 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~~ 120 (340)
T 2bw4_A 60 HAMTFNGSV---------PGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEET 120 (340)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEEE
T ss_pred EEEEECCCC---------CCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCEE
Confidence 589999984 1289999999999999999973 3566778877542 2333322 1 39999999
Q ss_pred EEEEEeCCCCceeEEEEeecccc-cccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccC
Q 039963 277 NVLLTADQPPARYYMAARAYNSA-NVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSL 355 (578)
Q Consensus 277 dv~v~~~~~~G~y~i~~~~~~~~-~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l 355 (578)
++.+++++ +|+||+|||..... ..... +..+.+.+....... .. .+
T Consensus 121 ~y~~~~~~-~Gt~wyH~h~~~~~~~~~~~--Gl~G~~iV~~~~~~~------~~---~~--------------------- 167 (340)
T 2bw4_A 121 TLRFKATK-PGVFVYHCAPEGMVPWHVTS--GMNGAIMVLPRDGLK------DE---KG--------------------- 167 (340)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHHT--TCEEEEEEECTBCEE------CT---TS---------------------
T ss_pred EEEEECCC-CeEEEEEcCCCCchhhHHhC--cCEEEEEEccCcCcc------cc---cC---------------------
Confidence 99999995 89999999963210 00112 233333332211100 00 00
Q ss_pred CCCCCCCccceEEEEEe-ecccccCCCCCCCCccCC---------------CCCeeeEeecceeecCCCcchhhhhhccC
Q 039963 356 HEVKVPTVIDEDLFFTV-GLGLINCSNPNSPRCQGP---------------NGTRFAASINNVSFEFPTGNSLMQAYFQD 419 (578)
Q Consensus 356 ~p~~~p~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~---------------~g~~~~~~iN~~~~~~p~~~~ll~~~~~~ 419 (578)
.+...|+.+.+.+ +....... ....... ......|.+||+.|..
T Consensus 168 ----~p~~~d~e~~l~l~D~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~------------- 227 (340)
T 2bw4_A 168 ----QPLTYDKIYYVGEQDFYVPKDE---AGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL------------- 227 (340)
T ss_dssp ----CEECCSEEEEEEEEEECCCBCT---TSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT-------------
T ss_pred ----CCcCcceeEEEeeeeeeecccc---CCcccccccccccccchhhHhhcCCCCEEEECCccCCc-------------
Confidence 0011222222211 11100000 0000000 0001124455543210
Q ss_pred CCCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCC
Q 039963 420 QPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFN 499 (578)
Q Consensus 420 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~ 499 (578)
...+.+.++.|++++|++.|.+ ...|++|+|||.|+|+. +|.+
T Consensus 228 -------------------------------~~~~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~--dG~~- 270 (340)
T 2bw4_A 228 -------------------------------TGDHALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWA--TGKF- 270 (340)
T ss_dssp -------------------------------SGGGCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEET--TCCT-
T ss_pred -------------------------------cCCCceEcCCCCEEEEEECCCC---CccceEEecCcceEEeC--CCcc-
Confidence 0124678999999998887754 56789999999999985 3332
Q ss_pred CCCCCCCCCCCCCC--cceeEEeCCCcEEEEEEEeCCceeEEEEeech-hhHhccceEEEEEecCcc
Q 039963 500 PSTDTPKFNLIDPP--RRNTIGMPPGGWVAIRFVANNPGIWFMHCHLD-SHLTWGLAMAFLVENGDE 563 (578)
Q Consensus 500 ~~~~~~~~~~~~p~--~rDTv~vpp~~~~~irf~adnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~ 563 (578)
.+++ ++||+.|++|+.+.|.|++++||.|+||||++ +|++.|||+.|+|.+...
T Consensus 271 ----------~~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 271 ----------RNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp ----------TSCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred ----------cCCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 1233 47999999999999999999999999999999 599999999999986543
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.86 E-value=1.7e-20 Score=192.73 Aligned_cols=93 Identities=24% Similarity=0.239 Sum_probs=74.7
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCC--cceeEEeCCCcEEEEEEE
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPP--RRNTIGMPPGGWVAIRFV 531 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vpp~~~~~irf~ 531 (578)
+.+.++.|++++|++.|.+ ...|++++|+|.|+|++ +|.+- .++ ++||+.|.||+.+.|.|+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~--dG~~~-----------~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWE--TGKFH-----------NAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEET--TCCTT-----------SCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEe--CCccc-----------CCCccCcceEEECCCceEEEEEE
Confidence 3578899999998877744 33445557888888876 34331 222 589999999999999999
Q ss_pred eCCceeEEEEeechhhH-hccceEEEEEecCc
Q 039963 532 ANNPGIWFMHCHLDSHL-TWGLAMAFLVENGD 562 (578)
Q Consensus 532 adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~ 562 (578)
+++||.|+||||++.|+ +.|||+.|+|.+..
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999999999999997 99999999997643
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.86 E-value=6.4e-23 Score=230.57 Aligned_cols=88 Identities=20% Similarity=0.382 Sum_probs=78.2
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
+.+.++.|++|+|+|.|.+. ....||||||||.|+|++.+ +.++||+.|+||+++.|+|+++
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCS
T ss_pred CCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeC
Confidence 34678999999999999762 24589999999999998653 2389999999999999999999
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
+||.|+||||+++|++.|||+.|.|.
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCCceEEEeccccccccccccccccc
Confidence 99999999999999999999999984
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.83 E-value=8.4e-20 Score=194.99 Aligned_cols=245 Identities=15% Similarity=0.139 Sum_probs=161.4
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCC-CCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceE
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAM-NQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTT 276 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~ 276 (578)
..+++||+. +.|.|+++.|++++||+.|... ...+++|+||+. ..||... +..|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 579999985 1388999999999999999964 357899999975 4677542 2358999999
Q ss_pred EEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCC
Q 039963 277 NVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLH 356 (578)
Q Consensus 277 dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 356 (578)
++.++++ .+|.||+|||....... ...+..+.+.+..... .|.+
T Consensus 110 ~y~f~~~-~~Gt~~yH~H~~~~~~~--~~~Gl~G~~iv~~~~~----------------~~~~----------------- 153 (442)
T 2zoo_A 110 TFNFKAL-NPGLYIYHCATAPVGMH--IANGMYGLILVEPKEG----------------LAPV----------------- 153 (442)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHHH--HHTTCEEEEEEECTTC----------------CCCC-----------------
T ss_pred EEEEEcC-CCeEEEEecCCCChHHH--HhCccEEEEEEeCCCC----------------CCCC-----------------
Confidence 9999998 58999999984221111 1124455555543211 0111
Q ss_pred CCCCCCccceEEEEEee-cccccCCC-C---CCCCccCCCCCeeeEeecceeecCCCcchhhhhhccCCCCcccCCCCCC
Q 039963 357 EVKVPTVIDEDLFFTVG-LGLINCSN-P---NSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPV 431 (578)
Q Consensus 357 p~~~p~~~d~~~~~~~~-~~~~~~~~-~---~~~~~~~~~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~ 431 (578)
|+.+.+.+. ........ . ........+...-.+.|||+.+..
T Consensus 154 --------d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~------------------------- 200 (442)
T 2zoo_A 154 --------DREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGST------------------------- 200 (442)
T ss_dssp --------SEEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTT-------------------------
T ss_pred --------CceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCC-------------------------
Confidence 111111111 00000000 0 000000000011123455542210
Q ss_pred CCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCC
Q 039963 432 PPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLID 511 (578)
Q Consensus 432 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 511 (578)
...+.+.++.|++++|+|.|.+ ....|+||+|||.|.|++...+. ..
T Consensus 201 -------------------~~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~~------------~~ 247 (442)
T 2zoo_A 201 -------------------TDENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGGS------------LK 247 (442)
T ss_dssp -------------------SGGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CE
T ss_pred -------------------CCCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCcc------------CC
Confidence 0113578899999999999975 24689999999999999886332 13
Q ss_pred CCcceeEEeCCCcEEEEEEEeCCceeEEEEeechhh-HhccceEEEEEecCcc
Q 039963 512 PPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSH-LTWGLAMAFLVENGDE 563 (578)
Q Consensus 512 p~~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 563 (578)
|.+.|++.|.||+.+.|.|++++||.|++|||...| .+.||++.|.|.....
T Consensus 248 p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 248 NHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp ECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 668999999999999999999999999999999999 5999999999976543
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.82 E-value=1.1e-18 Score=179.57 Aligned_cols=248 Identities=18% Similarity=0.168 Sum_probs=152.1
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCC-CCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceE
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAM-NQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTT 276 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~ 276 (578)
..+++||+. ..|.|++++|+++++|+.|... ...|.++++|+.. +.||..+. .|.||+++
T Consensus 54 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSM---------PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPGEQA 114 (336)
T ss_dssp EEEEETTBS---------SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCCCEE
Confidence 579999984 2378999999999999999974 3667889998752 22332221 38999999
Q ss_pred EEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhhcccccCC
Q 039963 277 NVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLH 356 (578)
Q Consensus 277 dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 356 (578)
++.++++ .+|+||+|||..... ......+..+.+.+....... . +
T Consensus 115 ~y~f~~~-~~Gt~~yH~h~~~~~-~~~~~~Gl~G~liV~~~~~~~------~-----~---------------------- 159 (336)
T 1oe1_A 115 TLRFKAD-RSGTFVYHCAPEGMV-PWHVVSGMSGTLMVLPRDGLK------D-----P---------------------- 159 (336)
T ss_dssp EEEEECC-SCEEEEEECCCTTCH-HHHHHTTCEEEEEEECTTCCB------C-----T----------------------
T ss_pred EEEEECC-CCeEEEEecCCCCch-hHHHhCCCeEEEEEecCcCCc------c-----c----------------------
Confidence 9999998 489999999963210 000112333434333221100 0 0
Q ss_pred CCCCCCccceEEEEEee-cccccCCCCCCCCccCC---------------CCCeeeEeecceeecCCCcchhhhhhccCC
Q 039963 357 EVKVPTVIDEDLFFTVG-LGLINCSNPNSPRCQGP---------------NGTRFAASINNVSFEFPTGNSLMQAYFQDQ 420 (578)
Q Consensus 357 p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~g~~~~~~iN~~~~~~p~~~~ll~~~~~~~ 420 (578)
...+...|+.+.+.+. ....... ......+ ......+.+||+.+.
T Consensus 160 -~~~~~~~D~e~~l~~~D~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~--------------- 220 (336)
T 1oe1_A 160 -QGKPLHYDRAYTIGEFDLYIPKGP---DGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGA--------------- 220 (336)
T ss_dssp -TSCBCCCSEEEEEEEEEECCCBCT---TSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTT---------------
T ss_pred -ccCcccCCceeEeeeeeeeecccc---CCceeecccccccccchhhHhhcCCCCEEEECCeecc---------------
Confidence 0011123444433221 1100000 0000000 000011223332110
Q ss_pred CCcccCCCCCCCCccccCCCCCcccccccCCCceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCC
Q 039963 421 PGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNP 500 (578)
Q Consensus 421 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~ 500 (578)
..+.+.+.++.|++++|+..+.+ ...+++++|||.|.|+. +|.+
T Consensus 221 -----------------------------~~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-- 264 (336)
T 1oe1_A 221 -----------------------------LTGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-- 264 (336)
T ss_dssp -----------------------------TSGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT--
T ss_pred -----------------------------CCCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC--
Confidence 01125688999999998665543 34566668999999985 4432
Q ss_pred CCCCCCCCCCCCC--cceeEEeCCCcEEEEEEEeCCceeEEEEeechhhH-hccceEEEEEecCcc
Q 039963 501 STDTPKFNLIDPP--RRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHL-TWGLAMAFLVENGDE 563 (578)
Q Consensus 501 ~~~~~~~~~~~p~--~rDTv~vpp~~~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 563 (578)
..|+ +.||+.|++|+.+.+.+++++||.|+||||.+.|. +.||++.|.|.+..+
T Consensus 265 ---------~~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 265 ---------ANPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp ---------TSCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred ---------cCCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 1333 46999999999999999999999999999999986 999999999986544
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.73 E-value=1.6e-16 Score=169.28 Aligned_cols=248 Identities=14% Similarity=0.124 Sum_probs=158.3
Q ss_pred eeEEEE-EEEeeecCC-----------ceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEe-cccc--cCC
Q 039963 35 IQFHEF-IEAKPVKRL-----------CRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHW-HGVN--LKG 98 (578)
Q Consensus 35 ~~~~~l-~~~~~~~~~-----------g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~-HG~~--~~~ 98 (578)
.+++.| ++.-....+ |.....+++||+. .|+|+|++| ++++||.|.... ...+|+ ||.. +..
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 467777 665444333 3345789999985 699999999 999999999864 567888 7754 333
Q ss_pred CCCCCCCCc-----ccccccCCCCeEEEEEEecCCCcceeEecccccccccc-------------eEEEEEecCCCCCCC
Q 039963 99 NPWADGPEY-----VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRATV-------------YGAIIIYPRIGSSYP 160 (578)
Q Consensus 99 ~~~~DG~~~-----~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~Gl-------------~G~liV~~~~~~~~~ 160 (578)
.||.+- +....|.|||+++..++. .+.|+||++++......|+ ...+-.........+
T Consensus 230 ---~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 305 (451)
T 2uxt_A 230 ---GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV 305 (451)
T ss_dssp ---CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC--
T ss_pred ---eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc
Confidence 688532 456679999999999997 5679999998864322221 111122211100000
Q ss_pred CCCCCCceeeeecccccCCh-HHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCC
Q 039963 161 FPVPNREIPILLGEWWDKNP-MDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQ 239 (578)
Q Consensus 161 ~~~~d~e~~l~~~d~~~~~~-~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~ 239 (578)
..+.+..+..+..... .......... ..++|||+.+.. +.+.+.++.|++++|+|+|. .
T Consensus 306 ----~~~~p~~L~~~~~~~~~~~~~~~~~l~-------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~ 365 (451)
T 2uxt_A 306 ----TDSLPMRLLPTEIMAGSPIRSRDISLG-------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---E 365 (451)
T ss_dssp ------CCCSCSSSSCCCCCCCSEEEEEEEC-------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---E
T ss_pred ----cccCccccCCCCCCCCCCcceEEEEEe-------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---C
Confidence 0000000111000000 0000000000 046799998731 23568999999999999998 4
Q ss_pred cEEEEEeCceeEEEeecCccc---ceeEeeEEEEccCceEEEEEEeCCCCce----eEEEEeecccccccCCCcceEEEE
Q 039963 240 ELFFGVANHNLTVVGVDTSYT---KAFSTSVIMIAPGQTTNVLLTADQPPAR----YYMAARAYNSANVAFDNTTTTAIL 312 (578)
Q Consensus 240 ~~~~~l~gh~~~via~DG~~~---~p~~~d~v~l~pger~dv~v~~~~~~G~----y~i~~~~~~~~~~~~~~~~~~ail 312 (578)
.|+||||||.|+|++.||... .|.++|++.| |+++.|.|+++ +||. |++|||..... ..++.+.+
T Consensus 366 ~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil~H~-----d~GMm~~~ 437 (451)
T 2uxt_A 366 PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTLEMA-----DRGSIGQL 437 (451)
T ss_dssp EEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSHHHH-----HTTCEEEE
T ss_pred CcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCchhHH-----hCCCcEEE
Confidence 799999999999999999865 4789999999 99999999998 5666 99999975432 23566667
Q ss_pred Eecc
Q 039963 313 AYKS 316 (578)
Q Consensus 313 ~y~~ 316 (578)
.+..
T Consensus 438 ~v~~ 441 (451)
T 2uxt_A 438 LVNP 441 (451)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 7654
No 55
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.73 E-value=1.8e-16 Score=168.70 Aligned_cols=214 Identities=19% Similarity=0.220 Sum_probs=151.6
Q ss_pred eeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEecccccCCCCCCCCCCc-----ccccccCCCCeEEEEEE
Q 039963 51 RTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHWHGVNLKGNPWADGPEY-----VTQCPIQPGRSYTYQFT 124 (578)
Q Consensus 51 ~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DG~~~-----~~~~~i~PG~~~~y~~~ 124 (578)
.....+++||+. .|.|+|++| ++++||.|.... ...+|++|....-- ..||.+- +....|.|||+++..++
T Consensus 175 ~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi-~~DG~~~~~p~~~~~l~l~pgeR~dv~v~ 251 (439)
T 2xu9_A 175 KEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI-AADGGFLEEPLEVSELLLAPGERAEVLVR 251 (439)
T ss_dssp CCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred CCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE-ecCCCCCCCceEeceEEECCceeEEEEEE
Confidence 445689999986 699999999 999999999864 56788888642211 1588642 33456899999999998
Q ss_pred ecCCCcceeEeccccccc--c--cc--------------eEEEEEecCC-CCCCCCCCC------------CCceeeeec
Q 039963 125 IEGQEGTLWWHAHSRWIR--A--TV--------------YGAIIIYPRI-GSSYPFPVP------------NREIPILLG 173 (578)
Q Consensus 125 ~~~~~Gt~~YH~h~~~~~--~--Gl--------------~G~liV~~~~-~~~~~~~~~------------d~e~~l~~~ 173 (578)
. +++|.||++++..... + || ....+++-.. ....+++.. ++++.+.+.
T Consensus 252 ~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~~l~~~~~~r~~~l~~~ 330 (439)
T 2xu9_A 252 L-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTED 330 (439)
T ss_dssp C-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCCCCCCCSEEEEEEEEEE
T ss_pred c-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccCCCcccCCCCCcceEEEEEee
Confidence 7 5599999999743211 0 22 1122222111 111111110 011111110
Q ss_pred ccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEE
Q 039963 174 EWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVV 253 (578)
Q Consensus 174 d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~vi 253 (578)
. .+..++|||+.+.. ..+.+.++.|++++|+|.|.+ ...|+||||||.|+|+
T Consensus 331 ------------------~---~g~~~~iNg~~~~~------~~~~~~~~~g~~~~~~~~N~~-~~~HP~HLHG~~F~Vl 382 (439)
T 2xu9_A 331 ------------------M---MAARFFINGQVFDH------RRVDLKGQAQTVEVWEVENQG-DMDHPFHLHVHPFQVL 382 (439)
T ss_dssp ------------------G---GGTEEEETTBCCCT------TCCCEEECTTCEEEEEEEECS-SSCEEEEESSCCBEEE
T ss_pred ------------------c---cCceEeECCEECCC------CCCceecCCCCEEEEEEEcCC-CCCCCceeCCCcEEEE
Confidence 0 01378999998731 224588999999999999997 5779999999999999
Q ss_pred eecCccc-ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecc
Q 039963 254 GVDTSYT-KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYN 297 (578)
Q Consensus 254 a~DG~~~-~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~ 297 (578)
+.+|... .|.++|++.|.||+++.|.++++ +||.|.+|||...
T Consensus 383 ~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil~ 426 (439)
T 2xu9_A 383 SVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIVE 426 (439)
T ss_dssp EETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSHH
T ss_pred eeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcch
Confidence 9999865 68899999999999999999987 7999999999653
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.65 E-value=7.7e-15 Score=159.23 Aligned_cols=251 Identities=17% Similarity=0.217 Sum_probs=159.1
Q ss_pred eeEEEECCcCC---------CceEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCCCCCCCCCc----ccccccCCC
Q 039963 53 HNTVTVNGQFP---------GPTLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGNPWADGPEY----VTQCPIQPG 116 (578)
Q Consensus 53 ~~~~~~NG~~P---------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~~~~DG~~~----~~~~~i~PG 116 (578)
...+++||+.. -|+|+|++|+++++||.|.... ...+|++|.. +.. .||.+- +....|.||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~---~DG~~~~p~~~~~l~l~pg 267 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE---VDGVSHQPLTVDSLTIFAG 267 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE---ETTEEEEEEEESBEEECTT
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe---cCCccccceeeeeEEEccc
Confidence 45789999743 1899999999999999999864 5678887764 332 588532 334568999
Q ss_pred CeEEEEEEecCCCcceeEecccccc----cccceEEEEEecCCCCCCCCCCC-C----Cceeee-e--cccccCChH-HH
Q 039963 117 RSYTYQFTIEGQEGTLWWHAHSRWI----RATVYGAIIIYPRIGSSYPFPVP-N----REIPIL-L--GEWWDKNPM-DV 183 (578)
Q Consensus 117 ~~~~y~~~~~~~~Gt~~YH~h~~~~----~~Gl~G~liV~~~~~~~~~~~~~-d----~e~~l~-~--~d~~~~~~~-~~ 183 (578)
|+++..++++..+|.||.+++.... ..|+..+++.........|.... . .+.-+. + ......... ..
T Consensus 268 qR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 268 QRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp CEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred ceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcc
Confidence 9999999985557999999875421 12454555554322211111000 0 000000 0 000000000 00
Q ss_pred HHHH-HhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeC
Q 039963 184 LMQA-IFTGAAPNVSDAFTINGQPGDLYRC-------------S--RRETVRFQVEAGETVLLRIINAAMNQELFFGVAN 247 (578)
Q Consensus 184 ~~~~-~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~g 247 (578)
.... ...+.. .....|+|||+.+....- . ......+.++.|++++++|+| ...|+|||||
T Consensus 348 ~~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 0000 000000 011267899998742110 0 012357899999999999999 4678999999
Q ss_pred ceeEEEeecCcc----cceeEeeEEEE-ccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEecc
Q 039963 248 HNLTVVGVDTSY----TKAFSTSVIMI-APGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKS 316 (578)
Q Consensus 248 h~~~via~DG~~----~~p~~~d~v~l-~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 316 (578)
|.|+|++.+|.. ..|.++|++.| .+|+++.|.|+++ +||.|.+|||..... ..+..+.+.+..
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H~-----~~GM~~~~~v~~ 491 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWHL-----EAGLAVVFAEDI 491 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHHH-----TTTCEEEEEESG
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHHH-----hCCCeEEEEECC
Confidence 999999999865 26889999999 7999999999998 799999999964332 235555565543
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.64 E-value=9.5e-15 Score=157.90 Aligned_cols=270 Identities=15% Similarity=0.170 Sum_probs=166.3
Q ss_pred EEEE-EEEeeecCCce-----eeeEEEECCcCC--------CceEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCC
Q 039963 37 FHEF-IEAKPVKRLCR-----THNTVTVNGQFP--------GPTLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGN 99 (578)
Q Consensus 37 ~~~l-~~~~~~~~~g~-----~~~~~~~NG~~P--------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~ 99 (578)
++.| ++.-....++. ....+++||+.. .|+|+|++|+++++||.|.... ...+|++|.. +..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4555 55433333332 246789999753 2899999999999999999864 5677777754 332
Q ss_pred CCCCCCCc----ccccccCCCCeEEEEEEecCCCcceeEeccccc--------ccccceEEEEEecCCCCCCCCCCCCCc
Q 039963 100 PWADGPEY----VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW--------IRATVYGAIIIYPRIGSSYPFPVPNRE 167 (578)
Q Consensus 100 ~~~DG~~~----~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~--------~~~Gl~G~liV~~~~~~~~~~~~~d~e 167 (578)
.||.+- +....|.|||+++..++++..+|.||.+++... ...++..+++.........|.......
T Consensus 222 --~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~ 299 (503)
T 1hfu_A 222 --VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN 299 (503)
T ss_dssp --ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS
T ss_pred --ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc
Confidence 588531 234458999999999998555799999987531 112444455544322111110000000
Q ss_pred -eeeeeccccc---CC-hH---H-HHHHHHhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeEEEEe
Q 039963 168 -IPILLGEWWD---KN-PM---D-VLMQAIFTGAAPNVSDAFTINGQPGDLYRC-------------S--RRETVRFQVE 223 (578)
Q Consensus 168 -~~l~~~d~~~---~~-~~---~-~~~~~~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~ 223 (578)
..+-..+... .. .. . ........... .....|+|||+.+....- . ......+.++
T Consensus 300 ~~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~ 378 (503)
T 1hfu_A 300 PAQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELP 378 (503)
T ss_dssp CCBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEEC
T ss_pred cCCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEcc
Confidence 0000000000 00 00 0 00000000000 011268899998742110 0 0123578999
Q ss_pred cCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCccc----ceeEeeEEEE-ccCceEEEEEEeCCCCceeEEEEeeccc
Q 039963 224 AGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYT----KAFSTSVIMI-APGQTTNVLLTADQPPARYYMAARAYNS 298 (578)
Q Consensus 224 ~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~----~p~~~d~v~l-~pger~dv~v~~~~~~G~y~i~~~~~~~ 298 (578)
.|++++++|+|......|+||||||.|+|++.+|... .|.++|++.| .||+++.|.|+++ +||.|++|||....
T Consensus 379 ~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil~H 457 (503)
T 1hfu_A 379 RNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIEFH 457 (503)
T ss_dssp SSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSHHH
T ss_pred CCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCchhH
Confidence 9999999999654467899999999999999998752 5889999999 8999999999998 79999999996433
Q ss_pred ccccCCCcceEEEEEecc
Q 039963 299 ANVAFDNTTTTAILAYKS 316 (578)
Q Consensus 299 ~~~~~~~~~~~ail~y~~ 316 (578)
. ..++.+.+.+..
T Consensus 458 ~-----~~GM~~~~~v~~ 470 (503)
T 1hfu_A 458 L-----MNGLAIVFAEDM 470 (503)
T ss_dssp H-----HTTCEEEEEECH
T ss_pred h-----hCCCeEEEEECc
Confidence 2 234555565543
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.60 E-value=2.7e-14 Score=152.39 Aligned_cols=238 Identities=15% Similarity=0.179 Sum_probs=156.6
Q ss_pred eEEEE-EEEeeecCCce-------------eeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CceeEEecccc--cCC
Q 039963 36 QFHEF-IEAKPVKRLCR-------------THNTVTVNGQFPGPTLQVRDGDTLIITTINRAQ-YNITLHWHGVN--LKG 98 (578)
Q Consensus 36 ~~~~l-~~~~~~~~~g~-------------~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~--~~~ 98 (578)
.+| | ++......+|. ....+++||+. .|+|.|++|+ ++||.|... ....+|++|.. +..
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 445 6 66655554443 34688999986 5999999999 999999985 45678888764 232
Q ss_pred CCCCCCCC-----cccccccCCCCeEEEEEEecCCCcceeEeccccccc-------c--cceEEEEEecCCC-CC-----
Q 039963 99 NPWADGPE-----YVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIR-------A--TVYGAIIIYPRIG-SS----- 158 (578)
Q Consensus 99 ~~~~DG~~-----~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~-------~--Gl~G~liV~~~~~-~~----- 158 (578)
.||.. .+....|.|||+++..++. .+.|+|...++..... . ....-+.+..... .+
T Consensus 257 ---~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 257 ---TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp ---ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred ---cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 57632 1345569999999999987 5677776665432211 0 0111122222110 00
Q ss_pred -CCCCCCCCceeeeecccccC------ChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEE
Q 039963 159 -YPFPVPNREIPILLGEWWDK------NPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLR 231 (578)
Q Consensus 159 -~~~~~~d~e~~l~~~d~~~~------~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlr 231 (578)
.+++..++...+.++..... .........+ ...++|||+.+. .+.+.++++.|++++|+
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~ 398 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL--------ASMFLINRKSYD------LKRIDLSSKLGVVEDWI 398 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH--------HTTEEETTBCCC------TTCCCEEEETTCCEEEE
T ss_pred CCCCCCCCcEEEEEEeccchhcccccccccccccccc--------cceeEECCEeCC------CCCceEEeCCCCEEEEE
Confidence 01111222333333221100 0000000000 125899999872 23467999999999999
Q ss_pred EEEcCCCCcEEEEEeCceeEEEee--cCccc---ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecc
Q 039963 232 IINAAMNQELFFGVANHNLTVVGV--DTSYT---KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYN 297 (578)
Q Consensus 232 liN~~~~~~~~~~l~gh~~~via~--DG~~~---~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~ 297 (578)
|+|.+ ...|+||||||.|+|++. +|... ++.++|++.|.||+++.|.++++ .||.|++|||...
T Consensus 399 l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil~ 467 (481)
T 3zx1_A 399 VINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHILE 467 (481)
T ss_dssp EEECS-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSHH
T ss_pred EEcCC-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCChH
Confidence 99976 778999999999999999 99865 35789999999999999999997 7999999999643
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.58 E-value=9.8e-14 Score=149.04 Aligned_cols=237 Identities=16% Similarity=0.209 Sum_probs=151.2
Q ss_pred eeeEEEECCcC---------CCceEEEecCCEEEEEEEeCCC-CceeEEecccc--cCCCCCCCCCCc----ccccccCC
Q 039963 52 THNTVTVNGQF---------PGPTLQVRDGDTLIITTINRAQ-YNITLHWHGVN--LKGNPWADGPEY----VTQCPIQP 115 (578)
Q Consensus 52 ~~~~~~~NG~~---------PgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~--~~~~~~~DG~~~----~~~~~i~P 115 (578)
....+++||+. +-|.|+|++|+++++||.|... ....++++|.. +.. .||.+- +....|.|
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via---~DG~~~~P~~~~~l~i~p 243 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE---TDGVDSQELTVDEIQIFA 243 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE---ETTEEEEEEEESBEEECT
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE---eCCcccCCEEeeeEEEcC
Confidence 35689999963 3379999999999999999875 34567777654 333 588532 23456899
Q ss_pred CCeEEEEEEecCCCcceeEecccccc----cccceEEEEEecCCCCCCCCCCCCC-ceeeeecccccCCh------H---
Q 039963 116 GRSYTYQFTIEGQEGTLWWHAHSRWI----RATVYGAIIIYPRIGSSYPFPVPNR-EIPILLGEWWDKNP------M--- 181 (578)
Q Consensus 116 G~~~~y~~~~~~~~Gt~~YH~h~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~~~d~~~~~~------~--- 181 (578)
||+++..++++..+|.||..+..... ..|...+++.........|...... ... .+.+...... .
T Consensus 244 GqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~ 322 (495)
T 3t6v_A 244 AQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPH 322 (495)
T ss_dssp TCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSS
T ss_pred ceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccC
Confidence 99999999986556999998764311 1244445555543221111100000 000 0000000000 0
Q ss_pred --HHHHHH-HhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeEEEEecCcEEEEEEEEcCCCCcEEE
Q 039963 182 --DVLMQA-IFTGAAPNVSDAFTINGQPGDLYRC-------------S--RRETVRFQVEAGETVLLRIINAAMNQELFF 243 (578)
Q Consensus 182 --~~~~~~-~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~~G~~~rlrliN~~~~~~~~~ 243 (578)
...... ...+ .....|+|||+.+....- . ......+.++.|++|+|.|.|......|+|
T Consensus 323 ~~~~d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~ 399 (495)
T 3t6v_A 323 QGGADCNLNLSLG---FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPF 399 (495)
T ss_dssp TTCSSEEEECCEE---EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEE
T ss_pred CCCCcEEEEEEEE---ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcce
Confidence 000000 0000 012368899998632110 0 012346899999999999984344677999
Q ss_pred EEeCceeEEEeecCccc----ceeEeeEEEEcc-CceEEEEEEeCCCCceeEEEEeec
Q 039963 244 GVANHNLTVVGVDTSYT----KAFSTSVIMIAP-GQTTNVLLTADQPPARYYMAARAY 296 (578)
Q Consensus 244 ~l~gh~~~via~DG~~~----~p~~~d~v~l~p-ger~dv~v~~~~~~G~y~i~~~~~ 296 (578)
|||||.|+|++.+|... .|..+|++.|.+ |+.+.|.|+++ +||.|.+|||..
T Consensus 400 HLHGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 400 HLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp EETTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred eecCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 99999999999988653 588999999997 99999999999 799999999964
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.8e-13 Score=148.76 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=147.5
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCCCCCCCCCc----ccccccCCCCeEEEEEEe
Q 039963 53 HNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGNPWADGPEY----VTQCPIQPGRSYTYQFTI 125 (578)
Q Consensus 53 ~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~~~~DG~~~----~~~~~i~PG~~~~y~~~~ 125 (578)
...+++||+. .|+|+|++|+++++||.|.... ...++++|.. +.. .||.+- +....|.|||+++..+++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~---~DG~~~~P~~~~~l~l~~gqR~dvlv~~ 242 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE---IDGITTEKNVTDMLYITVAQRYTVLVHT 242 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE---ETTEEEEEEEESCEEECTTCEEEEEEEC
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe---ccCcCccccEeceEEECccceEEEEEEc
Confidence 4688999986 5999999999999999999864 4566776653 333 588532 234458999999999988
Q ss_pred cCC-CcceeEeccccccc-----c--cce-EEEEEecCCCCCCCCCCCCCceeeeecccccC-----Ch-HHHHHHH-Hh
Q 039963 126 EGQ-EGTLWWHAHSRWIR-----A--TVY-GAIIIYPRIGSSYPFPVPNREIPILLGEWWDK-----NP-MDVLMQA-IF 189 (578)
Q Consensus 126 ~~~-~Gt~~YH~h~~~~~-----~--Gl~-G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~-----~~-~~~~~~~-~~ 189 (578)
+.. .|.||......... . ... .+++...... ..+.+....++...+.+.... .. ....... ..
T Consensus 243 ~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~-~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~ 321 (534)
T 1zpu_A 243 KNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTA-ALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVD 321 (534)
T ss_dssp CSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTS-CBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEE
T ss_pred CCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCC-CCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEE
Confidence 433 47899887643211 0 111 2333322211 001000000000000000000 00 0000000 00
Q ss_pred --cCCCCCCCceEEEcCcCCCCCCC--------------C----CCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCce
Q 039963 190 --TGAAPNVSDAFTINGQPGDLYRC--------------S----RRETVRFQVEAGETVLLRIINAAMNQELFFGVANHN 249 (578)
Q Consensus 190 --~g~~~~~~~~~liNG~~~~~~~~--------------~----~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~ 249 (578)
.........+++|||+.+....- + ......+.++.|++++|.|.|.+ ...|+||||||.
T Consensus 322 ~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHGh~ 400 (534)
T 1zpu_A 322 VVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD-TGTHPFHLHGHA 400 (534)
T ss_dssp EEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS-SSCEEEEETTCC
T ss_pred EEeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC-CCCCCeEecCCc
Confidence 00001122478999997632110 0 01135689999999999999987 567999999999
Q ss_pred eEEEeecCc-----------c---------cceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecc
Q 039963 250 LTVVGVDTS-----------Y---------TKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYN 297 (578)
Q Consensus 250 ~~via~DG~-----------~---------~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~ 297 (578)
|+|++.++. + ..|.++|++.|.||+.+.|.|+++ +||.|.+|||...
T Consensus 401 F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~~ 467 (534)
T 1zpu_A 401 FQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIEW 467 (534)
T ss_dssp EEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCHH
T ss_pred eEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCchh
Confidence 999998853 1 247899999999999999999998 7999999999643
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.54 E-value=4.1e-13 Score=144.23 Aligned_cols=237 Identities=14% Similarity=0.163 Sum_probs=149.2
Q ss_pred eeeEEEECCcC--------CCceEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCCCCCCCCCc----ccccccCCC
Q 039963 52 THNTVTVNGQF--------PGPTLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGNPWADGPEY----VTQCPIQPG 116 (578)
Q Consensus 52 ~~~~~~~NG~~--------PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~~~~DG~~~----~~~~~i~PG 116 (578)
....+++||+. +-|.|+|++|+++++||.|.... ...+|++|.. +.. .||.+- +....|.||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via---~DG~~~~P~~~~~l~i~pG 241 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE---VDSVNSQPLEVDSIQIFAA 241 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE---ETTEEEEEEEESBEEECTT
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE---ECCcccCceEeeeEEECCC
Confidence 35688999973 34799999999999999998754 4677777754 332 588532 234468999
Q ss_pred CeEEEEEEecCCCcceeEecccccc----cccceEEEEEecCCCCCCCCCCCCCceeeeecccccCCh------H-----
Q 039963 117 RSYTYQFTIEGQEGTLWWHAHSRWI----RATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNP------M----- 181 (578)
Q Consensus 117 ~~~~y~~~~~~~~Gt~~YH~h~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~------~----- 181 (578)
|+++..++++..+|.||-.+..... ..+..-+++.........|........ ..+.+...... .
T Consensus 242 qR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~ 320 (499)
T 3pxl_A 242 QRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSG 320 (499)
T ss_dssp CEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTT
T ss_pred cEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCC
Confidence 9999999986566999988754211 113323444443322111110000000 00000000000 0
Q ss_pred HHHHHH-HhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeEEEEecCcEEEEEEEEc--CCCCcEEE
Q 039963 182 DVLMQA-IFTGAAPNVSDAFTINGQPGDLYRC-------------S--RRETVRFQVEAGETVLLRIINA--AMNQELFF 243 (578)
Q Consensus 182 ~~~~~~-~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~~G~~~rlrliN~--~~~~~~~~ 243 (578)
...... ...+ .....|+|||+.+....- . ......+.++.|++|+|.|.|. .....|+|
T Consensus 321 ~~d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~ 397 (499)
T 3pxl_A 321 GVDKAINMAFN---FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPF 397 (499)
T ss_dssp CSSEEEECCEE---ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEE
T ss_pred CCcEEEEEEEE---ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccc
Confidence 000000 0000 012368899998632110 0 0123578999999999999942 23567899
Q ss_pred EEeCceeEEEeecCccc----ceeEeeEEEEcc---CceEEEEEEeCCCCceeEEEEeec
Q 039963 244 GVANHNLTVVGVDTSYT----KAFSTSVIMIAP---GQTTNVLLTADQPPARYYMAARAY 296 (578)
Q Consensus 244 ~l~gh~~~via~DG~~~----~p~~~d~v~l~p---ger~dv~v~~~~~~G~y~i~~~~~ 296 (578)
|||||.|+|++.+|... .|..+|++.|.+ |+.+.|.|+++ +||.|.+|||..
T Consensus 398 HLHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 398 HLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp EETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred eecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 99999999999888643 588999999986 99999999999 899999999964
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.54 E-value=2.6e-13 Score=148.43 Aligned_cols=221 Identities=18% Similarity=0.202 Sum_probs=137.7
Q ss_pred eEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCCCCCCCCC----cccccccCCCCeEEEEEEe-cCCCcceeEecc
Q 039963 66 TLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGNPWADGPE----YVTQCPIQPGRSYTYQFTI-EGQEGTLWWHAH 137 (578)
Q Consensus 66 ~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~~~~DG~~----~~~~~~i~PG~~~~y~~~~-~~~~Gt~~YH~h 137 (578)
+|+|++|+++++||.|.... ...+|++|.. +.. .||.+ .+....|.|||+++..+++ +..+|.||-+++
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~---~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~ 281 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE---ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVG 281 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE---ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE---ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEE
Confidence 89999999999999999764 5577777754 332 58853 1334568999999999987 345899999888
Q ss_pred ccccc-c--cceEEEEEecCCCCCCCCCCCCCceeeeecccccCChHHHHHHHHh------c---------------CC-
Q 039963 138 SRWIR-A--TVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAIF------T---------------GA- 192 (578)
Q Consensus 138 ~~~~~-~--Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~~------~---------------g~- 192 (578)
..... . ...+.|-.........+... ..... .| .+.......... . +.
T Consensus 282 ~~~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~--~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~ 354 (552)
T 1aoz_A 282 TRARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AW--DDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQN 354 (552)
T ss_dssp EESSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CT--TCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEE
T ss_pred cccCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----cc--ccccccccccccccccCCCCCCCCCCcEEEEEEEeec
Confidence 65311 1 12233333222210000000 00000 00 000000000000 0 00
Q ss_pred CCCCCceEEEcCcCCCCC-----------------------------CCCC--------CceeEEEEecCcEEEEEEEEc
Q 039963 193 APNVSDAFTINGQPGDLY-----------------------------RCSR--------RETVRFQVEAGETVLLRIINA 235 (578)
Q Consensus 193 ~~~~~~~~liNG~~~~~~-----------------------------~~~~--------~~~~~l~v~~G~~~rlrliN~ 235 (578)
.......++|||+.+... +... .....+.++.|++++|.|.|.
T Consensus 355 ~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~ 434 (552)
T 1aoz_A 355 VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNA 434 (552)
T ss_dssp EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEEC
T ss_pred cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCC
Confidence 000012578898854210 0000 012358899999999999998
Q ss_pred CC-----CCcEEEEEeCceeEEEee-cCcc----------cceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecc
Q 039963 236 AM-----NQELFFGVANHNLTVVGV-DTSY----------TKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYN 297 (578)
Q Consensus 236 ~~-----~~~~~~~l~gh~~~via~-DG~~----------~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~ 297 (578)
+. ...|+||||||.|+|++. +|.+ ..|..+|++.|.+|+.+.|.|+++ +||.|.+|||...
T Consensus 435 ~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~~ 511 (552)
T 1aoz_A 435 NMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIEP 511 (552)
T ss_dssp CCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSHH
T ss_pred cccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeehh
Confidence 74 346999999999999998 4653 257899999999999999999998 7999999999743
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.53 E-value=1.4e-12 Score=142.66 Aligned_cols=241 Identities=12% Similarity=0.100 Sum_probs=146.1
Q ss_pred eeEEEECCcCC--------CceEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCCCCCCCCCc----ccccccCCCC
Q 039963 53 HNTVTVNGQFP--------GPTLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGNPWADGPEY----VTQCPIQPGR 117 (578)
Q Consensus 53 ~~~~~~NG~~P--------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~~~~DG~~~----~~~~~i~PG~ 117 (578)
...+++||+.. -|+|+|++|+++++||.|.... ...+|++|.. +.. .||.+- +....|.|||
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~---~DG~~~~p~~~~~l~l~pge 271 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA---ADMVPVNAMTVDSLFLAVGQ 271 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE---ETTEEEEEEEESCEEECTTC
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe---cCCcccCceEeCeEEEccEE
Confidence 45789999863 3799999999999999999865 5678887764 333 588642 3345689999
Q ss_pred eEEEEEEecCCCcceeEeccc--ccc---c-ccceEEEEEecCCCCCCCCCC----CC----Cc---eeeeecccccCC-
Q 039963 118 SYTYQFTIEGQEGTLWWHAHS--RWI---R-ATVYGAIIIYPRIGSSYPFPV----PN----RE---IPILLGEWWDKN- 179 (578)
Q Consensus 118 ~~~y~~~~~~~~Gt~~YH~h~--~~~---~-~Gl~G~liV~~~~~~~~~~~~----~d----~e---~~l~~~d~~~~~- 179 (578)
+++..++.+..+|.||..... ... . .....+++.........|... .+ .+ .++.-.......
T Consensus 272 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 272 RYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTC
T ss_pred EEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccc
Confidence 999999985567999988765 211 1 111123333322111111100 00 00 000000000000
Q ss_pred hHHHHHHHH-hcCCCCCCCceEEEcCcCCCCCCCC-------------CCceeEEEEecCcEEEEEEEEcCC----CCcE
Q 039963 180 PMDVLMQAI-FTGAAPNVSDAFTINGQPGDLYRCS-------------RRETVRFQVEAGETVLLRIINAAM----NQEL 241 (578)
Q Consensus 180 ~~~~~~~~~-~~g~~~~~~~~~liNG~~~~~~~~~-------------~~~~~~l~v~~G~~~rlrliN~~~----~~~~ 241 (578)
......... ...........++|||+.+....-. ......+.++.++.+++.++|... ...|
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~H 431 (559)
T 2q9o_A 352 VKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 431 (559)
T ss_dssp CCCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCE
T ss_pred ccceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCC
Confidence 000000000 0000011224789999986321000 001235778777667666666643 5789
Q ss_pred EEEEeCceeEEEeecC---------c-c-----------cceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecc
Q 039963 242 FFGVANHNLTVVGVDT---------S-Y-----------TKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYN 297 (578)
Q Consensus 242 ~~~l~gh~~~via~DG---------~-~-----------~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~ 297 (578)
+||||||.|+|++.++ . + ..|.++|++.|.+|+.+.|.|+++ +||.|++|||...
T Consensus 432 P~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil~ 507 (559)
T 2q9o_A 432 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIAW 507 (559)
T ss_dssp EEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCHH
T ss_pred cEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecchh
Confidence 9999999999999986 2 2 146799999999999999999998 7999999999754
No 64
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.53 E-value=2.9e-13 Score=144.50 Aligned_cols=232 Identities=14% Similarity=0.129 Sum_probs=145.7
Q ss_pred eeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEe-ccc--ccCCCCCCCCCC-----cccccccCCCCeEEEE
Q 039963 52 THNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHW-HGV--NLKGNPWADGPE-----YVTQCPIQPGRSYTYQ 122 (578)
Q Consensus 52 ~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~-HG~--~~~~~~~~DG~~-----~~~~~~i~PG~~~~y~ 122 (578)
....+++||+. .|.+.+ +|+++|+||.|.... ...+++ +|. .+.. .||.. .+....|.|||+++..
T Consensus 182 ~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa---~DG~~l~~P~~~~~l~l~pGeR~dvl 256 (488)
T 3od3_A 182 FGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIA---SDGGLLPEPVKVSELPVLMGERFEVL 256 (488)
T ss_dssp CCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEE---ETTEEEEEEEEESCEEECTTCEEEEE
T ss_pred CCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEE---eCCCcccCccEeceEEECCCCEEEEE
Confidence 34679999985 488876 677999999999754 556776 454 3444 68842 1345569999999999
Q ss_pred EEecCCCcceeEecccccccccc--------eEEEEEec-----CCCCCC---C---CCC----CCCceeeeecc-cccC
Q 039963 123 FTIEGQEGTLWWHAHSRWIRATV--------YGAIIIYP-----RIGSSY---P---FPV----PNREIPILLGE-WWDK 178 (578)
Q Consensus 123 ~~~~~~~Gt~~YH~h~~~~~~Gl--------~G~liV~~-----~~~~~~---~---~~~----~d~e~~l~~~d-~~~~ 178 (578)
+++ .+.++|+.-...... .|+ .-.+-|.+ ....+. + .+. ..+++.+.+.. +...
T Consensus 257 v~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~ 334 (488)
T 3od3_A 257 VEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMM 334 (488)
T ss_dssp EEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHH
T ss_pred EEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccc
Confidence 998 456777665432211 111 01222221 111110 0 011 11333343321 0000
Q ss_pred ChHHHHHH----HHh------------cCCC-C-------CCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEE
Q 039963 179 NPMDVLMQ----AIF------------TGAA-P-------NVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIIN 234 (578)
Q Consensus 179 ~~~~~~~~----~~~------------~g~~-~-------~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN 234 (578)
.....+.. .+. .|.. . .....++|||+.+. .+.+.++++.|++++|+|+|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~------~~~~~~~~~~G~~e~w~l~N 408 (488)
T 3od3_A 335 GMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFD------MNKPMFAAAKGQYERWVISG 408 (488)
T ss_dssp HHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCC------TTCCSEECCBSSCEEEEEEC
T ss_pred ccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCC------CCCCceEcCCCCEEEEEEEe
Confidence 00000000 000 0100 0 00124799999873 23466899999999999999
Q ss_pred cCCCCcEEEEEeCceeEEEeecCcccc---eeEeeEEEEccCceEEEEEEeCC---CCceeEEEEeecc
Q 039963 235 AAMNQELFFGVANHNLTVVGVDTSYTK---AFSTSVIMIAPGQTTNVLLTADQ---PPARYYMAARAYN 297 (578)
Q Consensus 235 ~~~~~~~~~~l~gh~~~via~DG~~~~---p~~~d~v~l~pger~dv~v~~~~---~~G~y~i~~~~~~ 297 (578)
.+....|+||||||+|+|++.||.... +.++|++.|. |+++.|++++++ .+|.|++|||...
T Consensus 409 ~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~ 476 (488)
T 3od3_A 409 VGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLE 476 (488)
T ss_dssp TTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHH
T ss_pred CCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchH
Confidence 986678999999999999999998763 3589999999 999999999974 3579999999643
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.51 E-value=4.1e-13 Score=142.84 Aligned_cols=210 Identities=16% Similarity=0.154 Sum_probs=141.4
Q ss_pred eeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEe--cc-----cccCCCCCCCCCCc-----ccccccCCCCe
Q 039963 52 THNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHW--HG-----VNLKGNPWADGPEY-----VTQCPIQPGRS 118 (578)
Q Consensus 52 ~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~--HG-----~~~~~~~~~DG~~~-----~~~~~i~PG~~ 118 (578)
....+++||+. .|+|+|++| ++++||.|.... ...+|+ +| +.+.. .||.+- +....|.|||+
T Consensus 168 ~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via---~DG~~~~~P~~~~~l~l~pgeR 242 (448)
T 3aw5_A 168 LGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA---VDQGFLARPIEVRALFLAPAER 242 (448)
T ss_dssp CCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE---ETTEEEEEEEEESCEEECTTCE
T ss_pred cccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE---eCCCccCCceEeceEEECCcce
Confidence 45688999986 599999999 999999999864 567888 65 34443 588531 23456899999
Q ss_pred EEEEEEecCCCcceeEeccccccc-c---cc----------eE--EEEEecCCCCCCC--CCC-------CCCceeeeec
Q 039963 119 YTYQFTIEGQEGTLWWHAHSRWIR-A---TV----------YG--AIIIYPRIGSSYP--FPV-------PNREIPILLG 173 (578)
Q Consensus 119 ~~y~~~~~~~~Gt~~YH~h~~~~~-~---Gl----------~G--~liV~~~~~~~~~--~~~-------~d~e~~l~~~ 173 (578)
++..++.+ .+.||..++..... . ++ .. .|.+......+.| +.. ...+..+.+.
T Consensus 243 ~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~ 320 (448)
T 3aw5_A 243 AEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS 320 (448)
T ss_dssp EEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE
T ss_pred EEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe
Confidence 99999874 47888877643210 0 01 11 1222221111000 000 0011111111
Q ss_pred ccccCChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEE-EecCcEEEEEEEEcCCCCcEEEEEeCceeEE
Q 039963 174 EWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQ-VEAGETVLLRIINAAMNQELFFGVANHNLTV 252 (578)
Q Consensus 174 d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~-v~~G~~~rlrliN~~~~~~~~~~l~gh~~~v 252 (578)
. + ...|+|||+.+.. +.+.+. ++.|++++|+|.|.+....|+||||||.|+|
T Consensus 321 ~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~V 373 (448)
T 3aw5_A 321 L----------------S-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWI 373 (448)
T ss_dssp E----------------E-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEE
T ss_pred C----------------C-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEE
Confidence 0 0 1258999998732 224456 8999999999999875667999999999999
Q ss_pred EeecCccc------------ce---eEeeEEEEccCceEEEEEEeC----CCCceeEEEEeecc
Q 039963 253 VGVDTSYT------------KA---FSTSVIMIAPGQTTNVLLTAD----QPPARYYMAARAYN 297 (578)
Q Consensus 253 ia~DG~~~------------~p---~~~d~v~l~pger~dv~v~~~----~~~G~y~i~~~~~~ 297 (578)
++.+|... .| .++|++.|.||+++.|.+++. +.| |.+|||...
T Consensus 374 l~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~ 435 (448)
T 3aw5_A 374 IERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLE 435 (448)
T ss_dssp EEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHH
T ss_pred EEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChH
Confidence 99999764 23 589999999999999996664 255 999999643
No 66
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.51 E-value=7.1e-13 Score=145.14 Aligned_cols=244 Identities=15% Similarity=0.133 Sum_probs=150.6
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEeccc---------ccCCCCCCCCCCc-----cc------cc
Q 039963 53 HNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHWHGV---------NLKGNPWADGPEY-----VT------QC 111 (578)
Q Consensus 53 ~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~---------~~~~~~~~DG~~~-----~~------~~ 111 (578)
...+++||+. .|.|.|++| ++++||.|.... ...+++.|. .+.+ .||.+- +. ..
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~l 328 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPVL 328 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSSE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccEE
Confidence 4678999985 599999999 999999999863 445666543 3333 588532 22 45
Q ss_pred ccCCCCeEEEEEEecCCCcc-eeEeccccccccc-----------ceEEEEEecCCC-CCCCCCCC----------C---
Q 039963 112 PIQPGRSYTYQFTIEGQEGT-LWWHAHSRWIRAT-----------VYGAIIIYPRIG-SSYPFPVP----------N--- 165 (578)
Q Consensus 112 ~i~PG~~~~y~~~~~~~~Gt-~~YH~h~~~~~~G-----------l~G~liV~~~~~-~~~~~~~~----------d--- 165 (578)
.|.|||+++..++....+|+ ++..........| ..--|.|..+.. .....+.. +
T Consensus 329 ~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~ 408 (612)
T 2g23_A 329 SAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPH 408 (612)
T ss_dssp EECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCC
T ss_pred EECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccc
Confidence 78999999999998655675 5544432111101 112244543321 11111110 0
Q ss_pred Cceeeeec------------ccccCChHHHHHHHH--hcC-----CCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCc
Q 039963 166 REIPILLG------------EWWDKNPMDVLMQAI--FTG-----AAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGE 226 (578)
Q Consensus 166 ~e~~l~~~------------d~~~~~~~~~~~~~~--~~g-----~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~ 226 (578)
....+++. -|....... ..... ..+ ........++|||+.+ .+.+.++++.|+
T Consensus 409 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~-------~~~~~~~v~~G~ 480 (612)
T 2g23_A 409 GHRLIVLTPPGTKGSGGHPEIWEMAEVED-PADVQVPAEGVIQVTGADGRTKTYRRTAATF-------NDGLGFTIGEGT 480 (612)
T ss_dssp EEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETTC
T ss_pred ceeEEeeccccccccccccceeecccccc-ccccccccccceeeeccCCceeEEEECCccC-------CCCCceEecCCC
Confidence 00111110 010000000 00000 000 0001124689999987 345789999999
Q ss_pred EEEEEEEEcCCCCcEEEEEeCceeEEEeecCc------------------------cc---ceeEeeEEEEccCceEEEE
Q 039963 227 TVLLRIINAAMNQELFFGVANHNLTVVGVDTS------------------------YT---KAFSTSVIMIAPGQTTNVL 279 (578)
Q Consensus 227 ~~rlrliN~~~~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~d~v~l~pger~dv~ 279 (578)
+++|+|+|.+ ...|+||||||.|+|++.+|. .. ++.++|++.|.||+++.|.
T Consensus 481 ~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~ 559 (612)
T 2g23_A 481 HEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEE
Confidence 9999999998 678999999999999987532 11 2347999999999999999
Q ss_pred EEeCCCCceeEEEEeecccccccCCCcceEEEEEec
Q 039963 280 LTADQPPARYYMAARAYNSANVAFDNTTTTAILAYK 315 (578)
Q Consensus 280 v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~ 315 (578)
++++..||.|++|||..... ..++.+.+.+.
T Consensus 560 ~~~~~~pG~w~~HCHil~He-----d~GMm~~f~V~ 590 (612)
T 2g23_A 560 GKFDGAYGRFMYHCHLLEHE-----DMGMMRPFVVM 590 (612)
T ss_dssp EECCSCCEEEEEEESSHHHH-----TTTCEEEEEEE
T ss_pred EEeCCCCccEEEEeCchhHh-----hcCCceEEEEC
Confidence 99997789999999965432 23455555554
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.50 E-value=1.5e-13 Score=148.97 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=146.3
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEeccc---ccCCCCCCCCCCc-----ccccccCCCCeEEEEE
Q 039963 53 HNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHWHGV---NLKGNPWADGPEY-----VTQCPIQPGRSYTYQF 123 (578)
Q Consensus 53 ~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~---~~~~~~~~DG~~~-----~~~~~i~PG~~~~y~~ 123 (578)
...+++||+. .|.|.++.| ++++||.|.... ...+|+.|. .+.. .||..- +....|.|||+++..+
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via---~DG~~~~~P~~~~~l~l~pgeR~dvlv 304 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG---SDGGLLPRSVKLNSFSLAPAERYDIII 304 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE---ETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc---cCCCcccCceEeCeEEECCeeeEEEEE
Confidence 4678999986 699999885 999999999865 467888665 3333 688421 3445689999999999
Q ss_pred EecCCCcceeEe-cccc--ccc-ccc-eEEEEEecCC--CC--CCCCCCCCC------------ceeeeecccccCChHH
Q 039963 124 TIEGQEGTLWWH-AHSR--WIR-ATV-YGAIIIYPRI--GS--SYPFPVPNR------------EIPILLGEWWDKNPMD 182 (578)
Q Consensus 124 ~~~~~~Gt~~YH-~h~~--~~~-~Gl-~G~liV~~~~--~~--~~~~~~~d~------------e~~l~~~d~~~~~~~~ 182 (578)
+.+..+|.++.- .... ... ... ...+...... .. ....+.... +..+.+..
T Consensus 305 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~-------- 376 (513)
T 2wsd_A 305 DFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG-------- 376 (513)
T ss_dssp ECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE--------
T ss_pred ECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe--------
Confidence 885556874321 1110 000 011 1222222211 00 000110000 01111110
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCc----
Q 039963 183 VLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTS---- 258 (578)
Q Consensus 183 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~---- 258 (578)
.........++|||+.+. +...+.++.|++++|+|.|.+ ...|+||||||.|+|++.+|.
T Consensus 377 --------~~~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~-~~~HP~HlHG~~F~Vl~~~~~~~~~ 440 (513)
T 2wsd_A 377 --------TQDEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPT-RGTHPIHLHLVSFRVLDRRPFDIAR 440 (513)
T ss_dssp --------EECTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEBCHHH
T ss_pred --------ecCCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCC-CCCcCEeEeCceEEEEEecCccccc
Confidence 000111235789999872 334578999999999999988 568999999999999998751
Q ss_pred ------------c-----cceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEec
Q 039963 259 ------------Y-----TKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYK 315 (578)
Q Consensus 259 ------------~-----~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~ 315 (578)
. .++.++|++.|.||+++.|.+++++.||.|.+|||..... ..++.+.+++.
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~-----~~GMm~~~~V~ 509 (513)
T 2wsd_A 441 YQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHE-----DYDMMRPMDIT 509 (513)
T ss_dssp HHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHH-----TTTCEEEEEEB
T ss_pred ccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhh-----hcCCceeEEEe
Confidence 0 0235899999999999999999966899999999975332 23555566654
No 68
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.50 E-value=8.4e-15 Score=123.84 Aligned_cols=89 Identities=24% Similarity=0.303 Sum_probs=68.7
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCC--CCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccc
Q 039963 61 QFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNP--WADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHS 138 (578)
Q Consensus 61 ~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~--~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~ 138 (578)
++++|+|++++||+|+ |+|.+..++++||||...+... .+||.+ .++..|.||++++|+|.+++++|+||||||.
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 5778999999999975 6799989999999998654210 022221 2456799999999999754689999999993
Q ss_pred ccccccceEEEEEec
Q 039963 139 RWIRATVYGAIIIYP 153 (578)
Q Consensus 139 ~~~~~Gl~G~liV~~ 153 (578)
+ ..+||.|.|+|++
T Consensus 92 H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 92 H-RGAGMVGKITVEG 105 (105)
T ss_dssp T-GGGTCEEEEEECC
T ss_pred c-hhcCCEEEEEEcC
Confidence 3 2459999999964
No 69
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.45 E-value=7.9e-13 Score=143.44 Aligned_cols=241 Identities=15% Similarity=0.115 Sum_probs=147.7
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-ceeEEecc---------cccCCCCCCCCCC-----cccccccCCCC
Q 039963 53 HNTVTVNGQFPGPTLQVRDGDTLIITTINRAQY-NITLHWHG---------VNLKGNPWADGPE-----YVTQCPIQPGR 117 (578)
Q Consensus 53 ~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG---------~~~~~~~~~DG~~-----~~~~~~i~PG~ 117 (578)
...+++||+. .|.|.|+.| ++|+||.|.... ...++++| +.+.. .||.. .+....|.|||
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa---~DG~~~~~P~~~~~l~l~pge 275 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA---SDSGLLEHPADTSLLYISMAE 275 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE---ETTEEEEEEEEESCEEECTTC
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE---eCCCcccCceEeceEEECCcc
Confidence 4688999984 699999985 999999999864 45788755 34443 58742 13455689999
Q ss_pred eEEEEEEecCCCc-ceeEeccccccc--------ccceEEEEEecCCCC----CCCCCCCCCceeeeecccccCChHHHH
Q 039963 118 SYTYQFTIEGQEG-TLWWHAHSRWIR--------ATVYGAIIIYPRIGS----SYPFPVPNREIPILLGEWWDKNPMDVL 184 (578)
Q Consensus 118 ~~~y~~~~~~~~G-t~~YH~h~~~~~--------~Gl~G~liV~~~~~~----~~~~~~~d~e~~l~~~d~~~~~~~~~~ 184 (578)
+++..++....+| +||......... ....+.+-....... ....+....... ...-.....
T Consensus 276 R~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~~~~~~~---- 349 (534)
T 3abg_A 276 RYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPSPTTNTP---- 349 (534)
T ss_dssp EEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCCCCCCCC----
T ss_pred EEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCCCccccc----
Confidence 9999998855578 577654321100 011122222211110 000000000000 000000000
Q ss_pred HHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEee-cCc---cc
Q 039963 185 MQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGV-DTS---YT 260 (578)
Q Consensus 185 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~-DG~---~~ 260 (578)
... ..+ .....|+|||+.+... .....+.++.|++++|.|.|.+....|+||||||.|+|++. +|. ..
T Consensus 350 ~~~-~~~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~ 421 (534)
T 3abg_A 350 RQF-RFG---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTV 421 (534)
T ss_dssp EEE-ECS---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCC
T ss_pred eEE-EEe---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcC
Confidence 000 000 0112578999987311 11234689999999999999986668999999999999998 663 11
Q ss_pred ---ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeecccccccCCCcceEEEEEeccC
Q 039963 261 ---KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSA 317 (578)
Q Consensus 261 ---~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (578)
+..++|++.|.||+++.|.+.+.++||.|.+|||..... ..++.+.+++...
T Consensus 422 ~~~~~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~-----d~GMm~~~~V~~~ 476 (534)
T 3abg_A 422 MPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHE-----DHDMMAAFNATVL 476 (534)
T ss_dssp CSGGGSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHH-----HTTCEEEEEECSS
T ss_pred CccccCCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHH-----hcCCceEEEEEec
Confidence 115799999999999999999444899999999975432 2355666666543
No 70
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=1.1e-12 Score=112.03 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=72.9
Q ss_pred CceeeeE-EEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecC
Q 039963 49 LCRTHNT-VTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEG 127 (578)
Q Consensus 49 ~g~~~~~-~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~ 127 (578)
+|..... .+||++++.+.|++++||+|+++++|.... +||+..... |. +..+.||++++|.|++ +
T Consensus 21 ~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~----~~~i~pG~~~~~~f~~-~ 86 (112)
T 1iby_A 21 EGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV----QEVIKAGETKTISFTA-D 86 (112)
T ss_dssp TTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE----EEEECTTCEEEEEEEC-C
T ss_pred ccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc----eeEeCCCCEEEEEEEC-C
Confidence 4555555 488988998999999999999999999866 455443321 21 3469999999999986 7
Q ss_pred CCcceeEecccccccccceEEEEEec
Q 039963 128 QEGTLWWHAHSRWIRATVYGAIIIYP 153 (578)
Q Consensus 128 ~~Gt~~YH~h~~~~~~Gl~G~liV~~ 153 (578)
++|+||||||.+...++|.|.|+|.+
T Consensus 87 ~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred CCEEEEEECCCCCchHHCEEEEEEeC
Confidence 99999999998876667999999964
No 71
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.32 E-value=2.6e-12 Score=115.88 Aligned_cols=98 Identities=21% Similarity=0.306 Sum_probs=70.2
Q ss_pred ceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCC------Cccc-ccccCCCC--eEE
Q 039963 50 CRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGP------EYVT-QCPIQPGR--SYT 120 (578)
Q Consensus 50 g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~------~~~~-~~~i~PG~--~~~ 120 (578)
|...+...++|. ++|+|+|++||+|+|+++|... ...|.+.+...+.++.+.. ++.. ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 455556667776 6799999999999999999743 3356655554443332210 0000 01689999 999
Q ss_pred EEEEecCCCcceeEecccccccc-cceEEEEEe
Q 039963 121 YQFTIEGQEGTLWWHAHSRWIRA-TVYGAIIIY 152 (578)
Q Consensus 121 y~~~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~ 152 (578)
|+|++ ++|+||||||..++.. ||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99974 8999999999877775 999999984
No 72
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.30 E-value=2.8e-10 Score=123.83 Aligned_cols=237 Identities=14% Similarity=0.075 Sum_probs=143.6
Q ss_pred eeEEEECCcCC----------------CceEEEecCCEEEEEEEeCCCC-ceeEEecccc--cCCCCCCCCCCc----cc
Q 039963 53 HNTVTVNGQFP----------------GPTLQVRDGDTLIITTINRAQY-NITLHWHGVN--LKGNPWADGPEY----VT 109 (578)
Q Consensus 53 ~~~~~~NG~~P----------------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~--~~~~~~~DG~~~----~~ 109 (578)
-...++||+.. .++|+|++|+++++||.|.... ...++.+|.. +.. .||.+- +.
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa---~DG~~v~P~~~~ 301 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA---NDLVPIVPYTTD 301 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE---ETTEEEEEEEES
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE---eCCccCCceEee
Confidence 35678999742 3799999999999999999864 4567777754 333 588641 23
Q ss_pred ccccCCCCeEEEEEEecCCCcceeEecccccc-----cccceEEEEEecCCCCCCCCCCCCCcee-eeecc--cccCC--
Q 039963 110 QCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWI-----RATVYGAIIIYPRIGSSYPFPVPNREIP-ILLGE--WWDKN-- 179 (578)
Q Consensus 110 ~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~-----~~Gl~G~liV~~~~~~~~~~~~~d~e~~-l~~~d--~~~~~-- 179 (578)
...|.|||+++..++++..+|.||-....... ..+..-+|+.........|.... .+.. ..+.+ .....
T Consensus 302 ~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~ 380 (580)
T 3sqr_A 302 TLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHL 380 (580)
T ss_dssp SEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSS
T ss_pred EEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCC
Confidence 44589999999999986668999988765321 11223344444322211111000 0000 00000 00000
Q ss_pred hHHHHHHH-----HhcCCCCCCCceEEEcCcCCCCC-C---------CCC---CceeEEEE----ecCcEEEEEEEEcC-
Q 039963 180 PMDVLMQA-----IFTGAAPNVSDAFTINGQPGDLY-R---------CSR---RETVRFQV----EAGETVLLRIINAA- 236 (578)
Q Consensus 180 ~~~~~~~~-----~~~g~~~~~~~~~liNG~~~~~~-~---------~~~---~~~~~l~v----~~G~~~rlrliN~~- 236 (578)
........ ...+ ....-.+.|||..+... . ... ...-.+.+ +.|++|.|.|-|.+
T Consensus 381 ~~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~ 458 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTG 458 (580)
T ss_dssp CCBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSS
T ss_pred CCCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCc
Confidence 00000000 0000 01123578999876310 0 000 01112334 45999999999986
Q ss_pred CCCcEEEEEeCceeEEEeecC-c-----------ccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeec
Q 039963 237 MNQELFFGVANHNLTVVGVDT-S-----------YTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAY 296 (578)
Q Consensus 237 ~~~~~~~~l~gh~~~via~DG-~-----------~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~ 296 (578)
....|+||||||.|+|++... . +..|..+|++.|.|++.+.|.++++ +||.|.+|||..
T Consensus 459 ~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 459 FGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp SCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred cccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 235799999999999999842 1 2357899999999999999999999 899999999964
No 73
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.26 E-value=1.6e-10 Score=128.39 Aligned_cols=93 Identities=12% Similarity=0.126 Sum_probs=76.3
Q ss_pred ceEEEcCcCCCCCCCCCCceeEEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCccc-----------------
Q 039963 198 DAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYT----------------- 260 (578)
Q Consensus 198 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~----------------- 260 (578)
..+.+|++.+ .+...+.++.|++++|.|+|.+ ...|+||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~-------~~~~~~~~~~g~~~~w~i~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~ 530 (612)
T 3gyr_A 459 KTYRRTARTF-------NDGLGFTIGEGTHEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLD 530 (612)
T ss_dssp EEEEEEECST-------TSCCCEEEETTCEEEEEEEECS-SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEE
T ss_pred ccccccCccC-------CCCcceEeCCCCEEEEEEEcCC-CCCcCEeECCCcEEEEeecCCcCccccccccccccccccc
Confidence 4577888865 2446689999999999999998 56799999999999998766321
Q ss_pred ----------ceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeeccc
Q 039963 261 ----------KAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNS 298 (578)
Q Consensus 261 ----------~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~~~ 298 (578)
++-++|++.|.+|+.+.|.+++.++||.|++|||....
T Consensus 531 ~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~H 578 (612)
T 3gyr_A 531 PDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEH 578 (612)
T ss_dssp EEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHH
T ss_pred cccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHH
Confidence 12358999999999999999976689999999997543
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=2.3e-11 Score=131.33 Aligned_cols=96 Identities=17% Similarity=0.294 Sum_probs=74.8
Q ss_pred CceeeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCC
Q 039963 49 LCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQ 128 (578)
Q Consensus 49 ~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~ 128 (578)
+++...+|++|+++++|+|++++||+|+++|+|.+...-. +||+.+.. .|+ +..+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4678889999999999999999999999999998653111 35554432 122 2479999999999987 89
Q ss_pred CcceeEeccccc--ccccceEEEEEecCC
Q 039963 129 EGTLWWHAHSRW--IRATVYGAIIIYPRI 155 (578)
Q Consensus 129 ~Gt~~YH~h~~~--~~~Gl~G~liV~~~~ 155 (578)
+|+||||||... ...||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999422 123999999999764
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.15 E-value=1.7e-10 Score=97.20 Aligned_cols=79 Identities=22% Similarity=0.362 Sum_probs=62.5
Q ss_pred CCcCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccc
Q 039963 59 NGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHS 138 (578)
Q Consensus 59 NG~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~ 138 (578)
+..+..+.|++++||+|++ .|..+.++++|+++. .||.....+..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3345568999999999655 699888999999852 2454434444689999999988 579999999998
Q ss_pred ccccccceEEEEEe
Q 039963 139 RWIRATVYGAIIIY 152 (578)
Q Consensus 139 ~~~~~Gl~G~liV~ 152 (578)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999984
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.14 E-value=4.5e-11 Score=106.23 Aligned_cols=95 Identities=16% Similarity=0.206 Sum_probs=71.8
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCC-CCCccccCCceEEEE--------ec-cCCCCCCCCCCCCCCCCCCcceeEEeCCC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVE-DHPMHLHGHEFYVVG--------SG-FGNFNPSTDTPKFNLIDPPRRNTIGMPPG 523 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~-~HP~HlHG~~F~Vl~--------~g-~g~~~~~~~~~~~~~~~p~~rDTv~vpp~ 523 (578)
..++++.|++|+|+|.|.+ .. .|.||+|+....+.. .+ ...|.+.. ....++||..|.|+
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCC
Confidence 3578999999999999965 45 799999876531110 00 00121110 12347899999999
Q ss_pred cEEEEEEEeCCceeEEEEeechhhHhccceEEEEEe
Q 039963 524 GWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 524 ~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
+...|.|++++||.|.||||+..|.. ||++.|+|+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999983
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.13 E-value=1.1e-10 Score=98.24 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=66.3
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe-
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVA- 532 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~a- 532 (578)
+.++++.|++|+|+ |.+ ...|++|+||..+... .|. + .+....++..|.||+...++|++
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~---~g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA---SKE-L----------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG---CHH-H----------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc---ccc-c----------cccccccccccCCCCeEEEEEecC
Confidence 46789999999864 644 4689999999876331 000 0 00112578999999999999998
Q ss_pred CCceeEEEEeechhhHhccceEEEEEec
Q 039963 533 NNPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 533 dnpG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
+.||.|.|||| .|...||++.+.|+|
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 79999999999 799999999999864
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.94 E-value=1.9e-09 Score=90.75 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=60.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCC----cccccccCCCCeEEEEEEecCCCcceeEeccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPE----YVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW 140 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~ 140 (578)
+.|++++||+|++ .|....++++|.|+...+. .+|.. ......+.||++++|.|+.+.++|+|||||+ ..
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 7999999998755 5887788999988764321 12210 0112358999999999964468999999999 22
Q ss_pred ccccceEEEEEec
Q 039963 141 IRATVYGAIIIYP 153 (578)
Q Consensus 141 ~~~Gl~G~liV~~ 153 (578)
..+||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3359999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.91 E-value=4.4e-09 Score=93.24 Aligned_cols=88 Identities=13% Similarity=0.078 Sum_probs=64.4
Q ss_pred CceEEEecCCEEEEEEEeCCCC-ceeEEecccccC--------------CCCCC-CCCCc--ccccccCCCCeEEEEEEe
Q 039963 64 GPTLQVRDGDTLIITTINRAQY-NITLHWHGVNLK--------------GNPWA-DGPEY--VTQCPIQPGRSYTYQFTI 125 (578)
Q Consensus 64 gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~--------------~~~~~-DG~~~--~~~~~i~PG~~~~y~~~~ 125 (578)
-+.|++++||+|+++|+|.... +++++.++.... ...+. ++.+. .....|.||+++++.|++
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~ 113 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA 113 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC
Confidence 3789999999999999999877 888888874210 00000 01000 011248999999999986
Q ss_pred cCCCcceeEecccccccccceEEEEEe
Q 039963 126 EGQEGTLWWHAHSRWIRATVYGAIIIY 152 (578)
Q Consensus 126 ~~~~Gt~~YH~h~~~~~~Gl~G~liV~ 152 (578)
+++|+|+||||..++.+||.|.|+|.
T Consensus 114 -~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 114 -PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp -CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred -CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 68999999999876655999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.84 E-value=6.5e-09 Score=87.49 Aligned_cols=85 Identities=18% Similarity=0.258 Sum_probs=63.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCC-CcceeEEeCCCcEEEEEEEe
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDP-PRRNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p-~~rDTv~vpp~~~~~irf~a 532 (578)
..++++.|++|+|+ |.+ ...|++|+|+..+.. . .|. ..+ ..+|++.+.||+...+.|++
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~------------~~~~~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD------------LAKSLSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH------------HHHHHCBCSCCCSTTCEEEEECCT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc------------cchhccccceeeCCCCEEEEEEec
Confidence 35789999999886 643 467999999764410 0 000 000 01467889999999999988
Q ss_pred -CCceeEEEEeechhhHhccceEEEEEec
Q 039963 533 -NNPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 533 -dnpG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
+.||.|.|||| .|.+.||.+.+.|++
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVAG 106 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEcC
Confidence 79999999999 899999999999863
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.75 E-value=2.7e-08 Score=82.71 Aligned_cols=73 Identities=10% Similarity=0.146 Sum_probs=60.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
..|++++||+|++.++|....++++...+.... ..+.||++.++.|+. +++|+|.|+|..|. ..|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~H~-~~g 92 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRYHL-LKG 92 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcccc-CCC
Confidence 689999999999999999888888777665421 248999999999975 89999999997432 249
Q ss_pred ceEEEEEe
Q 039963 145 VYGAIIIY 152 (578)
Q Consensus 145 l~G~liV~ 152 (578)
|.|.|+|+
T Consensus 93 M~G~i~Ve 100 (100)
T 4hci_A 93 MEGKVIVK 100 (100)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999995
No 82
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.73 E-value=3.1e-08 Score=86.74 Aligned_cols=77 Identities=13% Similarity=0.269 Sum_probs=56.4
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccc
Q 039963 61 QFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW 140 (578)
Q Consensus 61 ~~PgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~ 140 (578)
.+--+.|++++||+|++ .|....+|++++.... +|........+.||++++|.| +++|+|+|+|..|.
T Consensus 56 ~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~ 123 (132)
T 3c75_A 56 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 123 (132)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc
Confidence 33337999999999865 5988778888775422 121112222589999999998 47899999998754
Q ss_pred ccccceEEEEEe
Q 039963 141 IRATVYGAIIIY 152 (578)
Q Consensus 141 ~~~Gl~G~liV~ 152 (578)
||.|.|+|+
T Consensus 124 ---gM~G~I~V~ 132 (132)
T 3c75_A 124 ---FMRGKVIVE 132 (132)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.69 E-value=5.2e-08 Score=80.60 Aligned_cols=80 Identities=18% Similarity=0.306 Sum_probs=57.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCC-CCcccccccCCCCeEEEEEEecCCCcceeEecccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADG-PEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRA 143 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG-~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~ 143 (578)
+.|++++||+|+ ++|....++++|+++...+.. .|. ........+.||++++++| .++|+|+|||+. ...+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~-H~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEP-HQGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGG-GGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEe---CCCeEEEEEcCC-cccc
Confidence 689999999876 589988899999998643211 110 0001123589999999988 378999999993 2335
Q ss_pred cceEEEEEe
Q 039963 144 TVYGAIIIY 152 (578)
Q Consensus 144 Gl~G~liV~ 152 (578)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.68 E-value=4.5e-08 Score=86.80 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=71.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCC--ceEEEE-e----c-cCCCCCCCCCCCCCCCCCCcceeEEeCCCcE
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGH--EFYVVG-S----G-FGNFNPSTDTPKFNLIDPPRRNTIGMPPGGW 525 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~--~F~Vl~-~----g-~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~ 525 (578)
..++++.|++|+|+|.|.+. ....|.||++.. ++.-+. . + ...|-+..+ ....+++|..|.||..
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~t~~l~pG~~ 105 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPD------TPNALAWTAMLNAGES 105 (140)
T ss_dssp SEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTT------CTTEEEECCCBCTTEE
T ss_pred CeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCccc------cccccccceeeCCCce
Confidence 35789999999999999421 257899999843 121000 0 0 001111000 0234688999999999
Q ss_pred EEEEEEeCCceeEEEEeechhhHhccceEEEEEe
Q 039963 526 VAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 526 ~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
..+.|+++.||.|.|||++..|...||.+.+.|.
T Consensus 106 ~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 106 GSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999999985
No 85
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.65 E-value=2.2e-07 Score=82.30 Aligned_cols=88 Identities=13% Similarity=0.127 Sum_probs=63.1
Q ss_pred ceEEEecCCEEEEEEEe--CCCCceeEEecccc------------cC-CCCC---CCCCCc-ccccccCCCCeEEEEEEe
Q 039963 65 PTLQVRDGDTLIITTIN--RAQYNITLHWHGVN------------LK-GNPW---ADGPEY-VTQCPIQPGRSYTYQFTI 125 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N--~l~~~~siH~HG~~------------~~-~~~~---~DG~~~-~~~~~i~PG~~~~y~~~~ 125 (578)
+.|++++||+|+++|+| ....+++++.+... .. ...+ .|.... .....|.||++.++.|++
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~ 112 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRT 112 (140)
T ss_dssp SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEEe
Confidence 79999999999999999 66778888877311 00 0000 010000 001248999999999987
Q ss_pred cCCCcceeEecccccccc-cceEEEEEec
Q 039963 126 EGQEGTLWWHAHSRWIRA-TVYGAIIIYP 153 (578)
Q Consensus 126 ~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~ 153 (578)
+.+|+|+|||+..+... ||.|.|+|.|
T Consensus 113 -~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 113 -PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp -CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred -CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 78999999999876664 9999999974
No 86
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.59 E-value=1.1e-07 Score=78.61 Aligned_cols=80 Identities=15% Similarity=0.255 Sum_probs=56.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
+.|++++||+|++ .|....+++++.++...++.. .++.. .....+.||+++++.| +++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 588778899998875321000 00000 1123589999999988 4799999999932 2359
Q ss_pred ceEEEEEe
Q 039963 145 VYGAIIIY 152 (578)
Q Consensus 145 l~G~liV~ 152 (578)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.58 E-value=1.5e-07 Score=77.77 Aligned_cols=79 Identities=18% Similarity=0.307 Sum_probs=59.7
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCc-ceeEEeCCCcEEEEEEEe
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPR-RNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~~~~~irf~a 532 (578)
..++++.|++|+|+ |.+ ...|.+|+++..+- +. ..+.+ .|+..+.||+...+.|
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--
Confidence 35789999999987 533 46799999864321 00 00111 5788999999988876
Q ss_pred CCceeEEEEeechhhHhccceEEEEEe
Q 039963 533 NNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 533 dnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
+.||.|.|||+ .|...||.+.+.|+
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 79999999999 79999999999984
No 88
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.57 E-value=1.7e-07 Score=76.32 Aligned_cols=73 Identities=19% Similarity=0.318 Sum_probs=54.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
+.|++++||+|++ .|....+++++.++..- + +.....+.||+++++.| +++|+|+|||+.+ ..+|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~-----~~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----L-----SHKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGAG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----G-----CEEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----c-----CcccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccCC
Confidence 6899999999865 58877889999887210 0 01123589999998887 5799999999933 2349
Q ss_pred ceEEEEEe
Q 039963 145 VYGAIIIY 152 (578)
Q Consensus 145 l~G~liV~ 152 (578)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 89
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.55 E-value=1.7e-07 Score=77.54 Aligned_cols=81 Identities=19% Similarity=0.294 Sum_probs=60.3
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+| .|.+ ...|.+|+|+..+ ...++. ...++|+..+.||+...++| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~------p~~~~~----------~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNA---GFPHNIVFDEDAI------PSGVNA----------DAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECS---SCCEEEEECGGGS------CTTCCH----------HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCC------CCcccc----------ccccccceecCCCCEEEEEe--C
Confidence 3578999999988 5643 4689999987422 000000 01246889999999988866 5
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||| .|.+.||.+.+.|+
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999883
No 90
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.48 E-value=3e-07 Score=74.75 Aligned_cols=73 Identities=21% Similarity=0.441 Sum_probs=57.7
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|+ |.+ ...|.+|+++.. +...++..+.||+...+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--C
Confidence 35789999999886 533 357999988620 0125778899999887766 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||+ .|...||.+.+.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999884
No 91
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.48 E-value=3.9e-07 Score=75.10 Aligned_cols=77 Identities=21% Similarity=0.287 Sum_probs=55.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCc--ccccccCCCCeEEEEEEecCCCcceeEeccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEY--VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIR 142 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~--~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~ 142 (578)
+.|++++||+| ++.|....+++++.++...+ +|..+ .....+.||+++++.| .++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999986 55688767888888765421 11100 0112589999999988 5799999999922 23
Q ss_pred ccceEEEEEe
Q 039963 143 ATVYGAIIIY 152 (578)
Q Consensus 143 ~Gl~G~liV~ 152 (578)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 4999999984
No 92
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.48 E-value=3.2e-07 Score=76.40 Aligned_cols=77 Identities=10% Similarity=0.105 Sum_probs=54.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCC-------CCCcc--cccccCCCCeEEEEEEecCCCcceeEe
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWAD-------GPEYV--TQCPIQPGRSYTYQFTIEGQEGTLWWH 135 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~D-------G~~~~--~~~~i~PG~~~~y~~~~~~~~Gt~~YH 135 (578)
+.|++++||+|+ |.|....+++++.+.-. . .+ ..++. ....+.||+++++.| .++|+|+||
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~ 86 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPA---G--APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFY 86 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCT---T--CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcc---c--ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEE
Confidence 789999999976 56887778888876311 0 10 00011 122489999999988 579999999
Q ss_pred cccccccccceEEEEEe
Q 039963 136 AHSRWIRATVYGAIIIY 152 (578)
Q Consensus 136 ~h~~~~~~Gl~G~liV~ 152 (578)
|+ ....+||.|.|+|+
T Consensus 87 C~-~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 87 CT-PHKSANMKGTLTVK 102 (102)
T ss_dssp CS-TTGGGTCEEEEEEC
T ss_pred eC-CCcccCCeEEEEEC
Confidence 99 32335999999984
No 93
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.47 E-value=5.2e-07 Score=74.63 Aligned_cols=77 Identities=17% Similarity=0.283 Sum_probs=55.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCc------ccccccCCCCeEEEEEEecCCCcceeEeccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEY------VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHS 138 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~ 138 (578)
+.|++++||+| +++|....+++++.++...+ +|... .....+.||+++++.| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 58999999986 45898877888888874321 22110 1112579999999988 379999999992
Q ss_pred ccccccceEEEEEe
Q 039963 139 RWIRATVYGAIIIY 152 (578)
Q Consensus 139 ~~~~~Gl~G~liV~ 152 (578)
...+||.|.|+|+
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2335999999984
No 94
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.47 E-value=5.5e-07 Score=74.52 Aligned_cols=77 Identities=10% Similarity=0.248 Sum_probs=55.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCc------ccccccCCCCeEEEEEEecCCCcceeEeccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEY------VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHS 138 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~ 138 (578)
+.|++++||+|+ |+|....+++++.++...+ +|... .....+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 689999999765 5898877888888764321 12100 1112479999999988 379999999993
Q ss_pred ccccccceEEEEEe
Q 039963 139 RWIRATVYGAIIIY 152 (578)
Q Consensus 139 ~~~~~Gl~G~liV~ 152 (578)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 235999999984
No 95
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.44 E-value=3.7e-07 Score=78.95 Aligned_cols=76 Identities=13% Similarity=0.214 Sum_probs=52.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
+.|++++||+|++.+.|. +|++..+... +-+|.. ...+.||++++|+| +.+|+|||||..| ...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999987666553 4444443211 122221 12457999999988 5789999999854 3469
Q ss_pred ceEEEEEecCC
Q 039963 145 VYGAIIIYPRI 155 (578)
Q Consensus 145 l~G~liV~~~~ 155 (578)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999998754
No 96
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.43 E-value=5.3e-07 Score=77.52 Aligned_cols=75 Identities=11% Similarity=0.105 Sum_probs=52.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
..|++++||+|++.++| .+|++..+.. .+-+|. ....+.||++++++| +.+|+|||+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 69999999998887776 2444444321 112332 112367999999999 5789999999943 2359
Q ss_pred ceEEEEEecC
Q 039963 145 VYGAIIIYPR 154 (578)
Q Consensus 145 l~G~liV~~~ 154 (578)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.42 E-value=5.4e-07 Score=77.39 Aligned_cols=75 Identities=9% Similarity=0.021 Sum_probs=53.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
..|++++||+|++. |.. .+|++..+.... -+|. ....+.||++++++| +.+|+|+|||..| ..+|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 69999999997654 554 567766653211 1222 112467999999998 4789999999733 2359
Q ss_pred ceEEEEEecC
Q 039963 145 VYGAIIIYPR 154 (578)
Q Consensus 145 l~G~liV~~~ 154 (578)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999864
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.41 E-value=8.1e-07 Score=75.35 Aligned_cols=75 Identities=19% Similarity=0.258 Sum_probs=58.1
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
+.++++.|+.|+|++.|.+ ...|-|++... .-+..+.||+...+.|+++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKS---PISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECC---CCeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 4688999999999999964 22333332210 1256789999999999999
Q ss_pred CceeEEEEeechhhHhccceEEEEEec
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
.||.|.||||+..|... |.+.++|+|
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887554 999999864
No 99
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.40 E-value=3.9e-07 Score=75.14 Aligned_cols=79 Identities=19% Similarity=0.378 Sum_probs=58.6
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|+ |.+ ...|.+++++..+ +.. . ....+++..+.||+...+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----------~~~-~------~~~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----------GES-A------PALSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----------TSC-H------HHHCBCCCCCSCSCCEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----------ccc-c------ccccccceecCCCCEEEEEe--C
Confidence 35789999999887 543 4579998886543 000 0 00014677888998888766 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||+ .|.+.||.+.+.|+
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 89999999999884
No 100
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.38 E-value=2.3e-06 Score=74.19 Aligned_cols=88 Identities=8% Similarity=0.049 Sum_probs=60.0
Q ss_pred ceEEEecC-CEEEEEEEeCCCCc-----eeE--Eeccccc----------CCCCC---CCC-CCcccccccCCCCeEEEE
Q 039963 65 PTLQVRDG-DTLIITTINRAQYN-----ITL--HWHGVNL----------KGNPW---ADG-PEYVTQCPIQPGRSYTYQ 122 (578)
Q Consensus 65 P~i~v~~G-d~v~v~l~N~l~~~-----~si--H~HG~~~----------~~~~~---~DG-~~~~~~~~i~PG~~~~y~ 122 (578)
..|.|++| |+|+|+|+|....+ |++ --+|... ...++ .|. +... ...|.||++.++.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~-t~~l~pGet~svt 96 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAF-TPIIGGGEKTSVK 96 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEE-CCCBCTTCEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceee-eeEECCCCEEEEE
Confidence 58999999 99999999987543 443 3333110 00000 111 1011 1248999999999
Q ss_pred EEec--CCCcceeEecccccccccceEEEEEec
Q 039963 123 FTIE--GQEGTLWWHAHSRWIRATVYGAIIIYP 153 (578)
Q Consensus 123 ~~~~--~~~Gt~~YH~h~~~~~~Gl~G~liV~~ 153 (578)
|+++ .++|+|||.|...++.+||.|.|+|.+
T Consensus 97 f~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9863 289999999998877779999999963
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.34 E-value=1.1e-06 Score=72.61 Aligned_cols=83 Identities=12% Similarity=0.174 Sum_probs=59.3
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+| .|.+ ...|.+|+++..|. ..++... ....+|++.+.||+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p------~g~~~~~--------~~~~~~~~~~~~G~~~~~~f--~ 75 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNA---GFPHNDLFDKKEVP------AGVDVTK--------ISMPEEDLLNAPGEEYSVTL--T 75 (99)
T ss_dssp SEEEECTTEEEEE--EECS---SCCBCCEECTTSSC------TTCCHHH--------HSCCTTCCBCSTTCEEEEEE--C
T ss_pred CEEEECCCCEEEE--EECC---CCcceEEEeCCCCc------ccccccc--------ccccccceeeCCCCEEEEEe--C
Confidence 3578999999888 4643 46899999975430 0000000 01125667889999888866 5
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||+ .|.+.||.+.+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999 79999999999883
No 102
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.29 E-value=3.5e-06 Score=70.62 Aligned_cols=73 Identities=14% Similarity=0.290 Sum_probs=52.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
..|++++||+|++ .|....++++....... |........+.||+++++.| +++|+|+|+|-.|. |
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---~ 98 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---F 98 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---T
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---C
Confidence 6999999999865 58877677766644221 11011112478999999988 47899999998764 9
Q ss_pred ceEEEEEe
Q 039963 145 VYGAIIIY 152 (578)
Q Consensus 145 l~G~liV~ 152 (578)
|.|.|+|+
T Consensus 99 M~G~I~V~ 106 (106)
T 1id2_A 99 MRGKVIVE 106 (106)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 103
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.28 E-value=1.9e-06 Score=71.38 Aligned_cols=73 Identities=15% Similarity=0.289 Sum_probs=58.0
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|++.|.+ ...|.|.+.+.. -...+.||....+.|+++
T Consensus 28 ~~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~----------------------------~~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKG---KSEHTFTIKKLG----------------------------IDVVVESGKEKNITVKPK 76 (100)
T ss_dssp SEEEECTTSCEEEEEEECS---SSCEEEEEGGGT----------------------------EEEEECTTCEEEEEECCC
T ss_pred CEEEECCCCEEEEEEEcCC---CceEEEEEecCC----------------------------cceeecCCcceeEEEecc
Confidence 3588999999999999964 344555443322 224577889999999999
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|+|. .|...||.+.+.|+
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCceEEEECc--cccCCCCEEEEEEC
Confidence 9999999996 59999999999984
No 104
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.28 E-value=2e-06 Score=77.69 Aligned_cols=89 Identities=12% Similarity=0.039 Sum_probs=59.6
Q ss_pred ceEEE-ecCCEEEEEEEeCCCCc-----eeEE--eccccc---------CCCCC---CCCCCcccccccCCCCeEEEEEE
Q 039963 65 PTLQV-RDGDTLIITTINRAQYN-----ITLH--WHGVNL---------KGNPW---ADGPEYVTQCPIQPGRSYTYQFT 124 (578)
Q Consensus 65 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH--~HG~~~---------~~~~~---~DG~~~~~~~~i~PG~~~~y~~~ 124 (578)
..|.| ++||+|+|+|+|....+ |++- -+|... ...++ .|.-.-.....|.||++.++.|+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~ 137 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLD 137 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEe
Confidence 48999 99999999999997653 4432 233100 00000 11100000124899999999997
Q ss_pred ec-CCCcceeEecccccccccceEEEEEec
Q 039963 125 IE-GQEGTLWWHAHSRWIRATVYGAIIIYP 153 (578)
Q Consensus 125 ~~-~~~Gt~~YH~h~~~~~~Gl~G~liV~~ 153 (578)
.+ -++|+|||+|...++..||.|-|+|.+
T Consensus 138 ~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 138 PAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp GGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred cCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 62 279999999998777779999999963
No 105
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.25 E-value=1.4e-06 Score=72.48 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=57.8
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCc-ceeEEeCCCcEEEEEEEe
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPR-RNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~~~~~irf~a 532 (578)
..++++.|++|+|+ |.+ ...|.++++.- +.++...... ...+.+ .+++.+.||+...+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIP---------AGAPGTVASE---LKAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCC---------TTCCHHHHHH---HHHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCc---------ccccccccch---hhcccccccceecCCCCEEEEEe--
Confidence 35789999999986 643 45799888721 0010000000 000112 4677889999888866
Q ss_pred CCceeEEEEeechhhHhccceEEEEEe
Q 039963 533 NNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 533 dnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
+.||.|.|||+ .|.+.||.+.+.|+
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999984
No 106
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.20 E-value=5.3e-06 Score=68.37 Aligned_cols=77 Identities=12% Similarity=0.160 Sum_probs=54.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCc----ccccccCCCCeEEEEEEecCCCcceeEeccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEY----VTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRW 140 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~ 140 (578)
+.|++++||+|++ .|....++++....-.. -+|... .....+.||+++++.| +++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 6999999999665 58877788887764211 122210 0112489999999988 57999999998632
Q ss_pred ccccceEEEEEe
Q 039963 141 IRATVYGAIIIY 152 (578)
Q Consensus 141 ~~~Gl~G~liV~ 152 (578)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 24999999984
No 107
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.16 E-value=8.9e-06 Score=70.44 Aligned_cols=87 Identities=11% Similarity=0.094 Sum_probs=58.3
Q ss_pred ceEEE-ecCCEEEEEEEeCCCCc-----eeEEe--ccccc----------CCCCC---CCCCCcccccccCCCCeEEEEE
Q 039963 65 PTLQV-RDGDTLIITTINRAQYN-----ITLHW--HGVNL----------KGNPW---ADGPEYVTQCPIQPGRSYTYQF 123 (578)
Q Consensus 65 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~----------~~~~~---~DG~~~~~~~~i~PG~~~~y~~ 123 (578)
..|.| ++||+|+|+|+|....+ |++-+ +|... ...++ .|.-.-.....|.||++.+..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 48999 99999999999997653 44332 22100 00000 1110000112479999999999
Q ss_pred EecC--CCcc-eeEecccccccccceEEEEEe
Q 039963 124 TIEG--QEGT-LWWHAHSRWIRATVYGAIIIY 152 (578)
Q Consensus 124 ~~~~--~~Gt-~~YH~h~~~~~~Gl~G~liV~ 152 (578)
+. . .+|+ |||.|...++.+||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 98 DV-SKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EG-GGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred ec-cccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 86 4 5665 999999888878999999995
No 108
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.14 E-value=6.1e-06 Score=70.98 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=49.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
+.|++++||+|++ .|... +|++..+. ....+|... ....||+++++.| +.+|+|+|+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPH-YAMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCc-ccCC
Confidence 7999999999765 55533 44444431 111223211 2356999988888 4799999999742 2259
Q ss_pred ceEEEEEecC
Q 039963 145 VYGAIIIYPR 154 (578)
Q Consensus 145 l~G~liV~~~ 154 (578)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 109
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.13 E-value=1.1e-05 Score=69.62 Aligned_cols=87 Identities=13% Similarity=0.143 Sum_probs=59.1
Q ss_pred ceEEE-ecCCEEEEEEEeCCCCc-----eeEEecc-----------ccc-CCCCC---CCCCCcccccccCCCCeEEEEE
Q 039963 65 PTLQV-RDGDTLIITTINRAQYN-----ITLHWHG-----------VNL-KGNPW---ADGPEYVTQCPIQPGRSYTYQF 123 (578)
Q Consensus 65 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH~HG-----------~~~-~~~~~---~DG~~~~~~~~i~PG~~~~y~~ 123 (578)
..|.| +.|++|+|+|+|....+ |++-+-. +.. ...++ .|.-.-.....|.||++.++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 58999 99999999999997654 5544321 000 00000 1110000012479999999999
Q ss_pred EecC--CCcc-eeEecccccccccceEEEEEe
Q 039963 124 TIEG--QEGT-LWWHAHSRWIRATVYGAIIIY 152 (578)
Q Consensus 124 ~~~~--~~Gt-~~YH~h~~~~~~Gl~G~liV~ 152 (578)
+. . ++|+ |+|.|...++.+||.|.|+|.
T Consensus 97 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 127 (128)
T 2iaa_C 97 DV-SKLKEGEDYAFFCSFPGHWSIMKGTIELG 127 (128)
T ss_dssp ES-SCCCTTCCEEEECCSTTCTTTSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEe
Confidence 86 4 6885 999999888888999999995
No 110
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.12 E-value=5.2e-06 Score=71.39 Aligned_cols=75 Identities=11% Similarity=0.214 Sum_probs=50.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
+.|++++||+|+ |.|... +|++..+. ..+.||.. ...+.||+++++.| +.+|+|+|+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPH-YMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTT-TTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCc-cccC
Confidence 799999999965 555543 44444431 11123321 12357999988888 4789999999742 2259
Q ss_pred ceEEEEEecC
Q 039963 145 VYGAIIIYPR 154 (578)
Q Consensus 145 l~G~liV~~~ 154 (578)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 111
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.08 E-value=4.9e-06 Score=68.72 Aligned_cols=83 Identities=12% Similarity=0.186 Sum_probs=58.0
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+| .|.+ ...|.++++...+- .+ .+ ... ....++.+.+.||+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p-----~~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP-----SG-VD------ASK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC-----TT-CC------HHH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc-----cc-cc------ccc--cccccCccccCCCCEEEEEE--C
Confidence 4678999999988 5643 46899998864320 00 00 000 00124556788999887766 6
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||+ .|...||.+.+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999883
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.07 E-value=1.8e-05 Score=68.39 Aligned_cols=87 Identities=8% Similarity=0.108 Sum_probs=58.4
Q ss_pred ceEEE-ecCCEEEEEEEeCCCCc-----eeEEe--ccccc------CCC----CC--CCCCCcc-cccccCCCCeEEEEE
Q 039963 65 PTLQV-RDGDTLIITTINRAQYN-----ITLHW--HGVNL------KGN----PW--ADGPEYV-TQCPIQPGRSYTYQF 123 (578)
Q Consensus 65 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~------~~~----~~--~DG~~~~-~~~~i~PG~~~~y~~ 123 (578)
..|.| ++||+|+|+|+|....+ |++-. .|... ... ++ .|..-.+ ....|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 58999 99999999999997653 55443 22110 000 00 0110000 011489999999999
Q ss_pred EecC--CCcc-eeEecccccccccceEEEEEe
Q 039963 124 TIEG--QEGT-LWWHAHSRWIRATVYGAIIIY 152 (578)
Q Consensus 124 ~~~~--~~Gt-~~YH~h~~~~~~Gl~G~liV~ 152 (578)
+. . .+|+ |+|.|...++.+||.|-|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 98 DV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 86 4 6777 999999888777999999983
No 113
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.03 E-value=2.1e-05 Score=83.30 Aligned_cols=88 Identities=17% Similarity=0.279 Sum_probs=63.0
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeCC---CCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCC
Q 039963 53 HNTVTVNGQFPGPTLQVRDGDTLIITTINRA---QYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQE 129 (578)
Q Consensus 53 ~~~~~~NG~~PgP~i~v~~Gd~v~v~l~N~l---~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~ 129 (578)
..+...+-.+--+.|+|++||+|++.|+|.. +..|++...++ | + ..-+.||++.++.|++ +++
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------G---I-K~DaiPGrtnsvtFta-dkP 611 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------G---V-SMEISPQQTSSITFVA-DKP 611 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------T---E-EEEECTTCEEEEEEEC-CSC
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------C---c-eeeeCCCCeEEEEEEc-CCC
Confidence 3344444455557999999999999999974 33444333221 1 1 1258999999999986 899
Q ss_pred cceeEeccccccc--ccceEEEEEecC
Q 039963 130 GTLWWHAHSRWIR--ATVYGAIIIYPR 154 (578)
Q Consensus 130 Gt~~YH~h~~~~~--~Gl~G~liV~~~ 154 (578)
|+|||+|...... .+|.|.|+|+|+
T Consensus 612 GvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 612 GLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEEECCCcCCCCcccceEEEEEecC
Confidence 9999999864322 489999999874
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.02 E-value=1.6e-05 Score=71.16 Aligned_cols=85 Identities=13% Similarity=0.271 Sum_probs=60.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCccee-------EEeCCCc--
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNT-------IGMPPGG-- 524 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDT-------v~vpp~~-- 524 (578)
+.++++.|++|++++.|.+ ....|-+-++. .+ ..+... |.-.+. ..|.||+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~-------~~-~~~~~~----------~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITK-------KG-PPYAVM----------PVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEES-------CC-SCCCSS----------CCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEee-------cC-cchhcc----------ccccccccccccccccCCCCce
Confidence 4689999999999999963 13445544442 11 111100 001121 2678999
Q ss_pred EEEEEEEeCCceeEEEEeechhhHhccceEEEEEe
Q 039963 525 WVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 525 ~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
...+.|++ .||.|.||||+..|...||-+.+.|+
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999873
No 115
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.97 E-value=1.7e-05 Score=68.05 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=50.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccccccccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRAT 144 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~~~~~G 144 (578)
+.|++++||+|++ .|... +++++...- .+.+|.. ...+.||+++++.| +++|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 7999999998665 56644 555544331 1122221 12457999999998 478999999987654
Q ss_pred ceEEEEEecC
Q 039963 145 VYGAIIIYPR 154 (578)
Q Consensus 145 l~G~liV~~~ 154 (578)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.95 E-value=2.5e-05 Score=65.14 Aligned_cols=73 Identities=19% Similarity=0.288 Sum_probs=51.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|+ |.+ ...|.+|+|... .|. ..+ +.-.+.||+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--C
Confidence 46889999999885 644 457998887521 010 001 122467888766665 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||++ |. ||.+.+.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999999873
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.89 E-value=3.8e-05 Score=83.01 Aligned_cols=78 Identities=21% Similarity=0.371 Sum_probs=63.1
Q ss_pred ceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe
Q 039963 453 TKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 453 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~a 532 (578)
.+.++++.|++|+|++.|.....+..|.|+++++.+. ..+.||....++|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 3568899999999999996432345788888765321 457889999999999
Q ss_pred CCceeEEEEee---chhhHhccceEEEEEec
Q 039963 533 NNPGIWFMHCH---LDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 533 dnpG~w~~HCH---il~H~d~GM~~~~~V~~ 560 (578)
+.||.|.|||| ...|. ||.+.++|++
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 99999999999 45675 9999999975
No 118
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.43 E-value=0.00027 Score=60.56 Aligned_cols=76 Identities=14% Similarity=0.287 Sum_probs=52.2
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|++.|. .|-+..+.. .+ |.. . +...+.|++...+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~~------~H~v~~~~~----------~~-P~g-~-----------~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK------SHNVEAIKE----------IL-PEG-V-----------ESFKSKINESYTLTV--T 69 (123)
T ss_dssp SEEEECTTEEEEEEESST------TCCCEECTT----------SS-CTT-C-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECCC------CceEEEcCC----------cC-CCC-c-----------cceecCCCCEEEEEe--C
Confidence 367899999999998761 355544321 01 110 0 111234677666665 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEecCc
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
.||.|.|+|- .|...||.+.+.|++++
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGDAP 96 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESSSC
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECCCC
Confidence 9999999999 89999999999998744
No 119
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.35 E-value=0.0013 Score=55.86 Aligned_cols=84 Identities=10% Similarity=0.112 Sum_probs=53.5
Q ss_pred ceEEEec-CCEEEEEEEeCCCCc-----eeEEec-----------ccccC-CCCC---CCC-CCcccccccCCCCeEEEE
Q 039963 65 PTLQVRD-GDTLIITTINRAQYN-----ITLHWH-----------GVNLK-GNPW---ADG-PEYVTQCPIQPGRSYTYQ 122 (578)
Q Consensus 65 P~i~v~~-Gd~v~v~l~N~l~~~-----~siH~H-----------G~~~~-~~~~---~DG-~~~~~~~~i~PG~~~~y~ 122 (578)
..|.|+. |++|+|+|+|....+ |++-.- |+... ..++ .|. +-.-+ ..|.||++.+..
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t-~~l~pGes~~vt 96 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHT-KLIGSGEKDSVT 96 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEEC-CCBCTTCEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceecc-ceeCCCcEEEEE
Confidence 6899986 999999999998543 443221 11100 0011 111 10011 237999999999
Q ss_pred EEec--CCCcceeEecccccccccceEEEEEe
Q 039963 123 FTIE--GQEGTLWWHAHSRWIRATVYGAIIIY 152 (578)
Q Consensus 123 ~~~~--~~~Gt~~YH~h~~~~~~Gl~G~liV~ 152 (578)
|+.+ ..+|+|.|.|. ++. ||.|.|+|.
T Consensus 97 f~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 9874 27899999999 445 999999983
No 120
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.34 E-value=0.00027 Score=60.86 Aligned_cols=76 Identities=20% Similarity=0.355 Sum_probs=51.0
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|++.|. .|-+..+.. .+ |.. . ..+.+.||+...+.| +
T Consensus 23 ~~i~V~~GDtVtf~n~~~------~H~v~~~~~----------~~-P~g-~-----------~~f~s~pGet~s~TF--~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK------GHNSALMKG----------GA-PEG-A-----------ETWKGKINEEITVTL--S 71 (127)
T ss_dssp SEEEECTTCEEEEECSSS------SCCCEECTT----------CS-CTT-C-----------CCCBCCTTCCCEEEC--C
T ss_pred CEEEECCCCEEEEEECCC------CceEEEccC----------cC-CCC-c-----------cceecCCCCEEEEEe--C
Confidence 467899999999987651 354444311 01 110 0 111224676655554 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEecCc
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
.||.|.|||- .|...||.+.+.|++++
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999999865
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.31 E-value=0.0004 Score=59.42 Aligned_cols=76 Identities=16% Similarity=0.236 Sum_probs=52.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|++.+ ..|-+..+.. .+... .+...+.+|....+.| +
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~ 70 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--E 70 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--C
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--C
Confidence 35789999999998553 3566655421 11100 1122345777666655 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEecCc
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
.||.|.|||- .|...||.+.+.|+++.
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 9999999995 89999999999998853
No 122
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.18 E-value=0.0013 Score=54.80 Aligned_cols=73 Identities=23% Similarity=0.225 Sum_probs=49.6
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..+.++.|++|+|+ |.+ ...|.+++.... .+ . . .-++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~----~---~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VG----E---D--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SS----S---S--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CC----c---c--------cccccccCCCCEEEEEe--C
Confidence 46789999999987 643 345666554311 00 0 0 01333567888777766 7
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|+|-+ |. ||.+.+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999999873
No 123
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.11 E-value=0.0015 Score=53.47 Aligned_cols=81 Identities=17% Similarity=0.311 Sum_probs=53.8
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|+ |.+ ...|-+.+... .+ |+ .++. .....+...+.||....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~----------~~-p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDED----------AV-PA----GVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTT----------SS-CT----TCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCC----------CC-cc----cccc-ccccccccccCCCCEEEEEc--C
Confidence 36789999999986 533 34665554421 11 00 0000 00013456788999887766 7
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|+|-+ |...||.+.+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999883
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.08 E-value=0.0016 Score=56.54 Aligned_cols=73 Identities=23% Similarity=0.225 Sum_probs=50.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|+|+ |.+ ...|-+++.... .| . . .-++-.+.||+...+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g----~----------~-~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VG----E----------D-AFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SS----S----------S-CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CC----c----------c-cccccccCCCCEEEEEc--C
Confidence 46789999999986 643 346766654311 00 0 0 11333567888877776 7
Q ss_pred CceeEEEEeechhhHhccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.||.|.|||-+ |. ||.+.+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999987 76 999999884
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.88 E-value=0.0054 Score=53.27 Aligned_cols=74 Identities=16% Similarity=0.360 Sum_probs=53.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEecccc--ccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSR--WIR 142 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~--~~~ 142 (578)
..|.++.|++|++.++|.. .. |++..+.. |. ..-+.||+..++.|+. +++|+|.|+|... ...
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 33433221 11 1247899999999976 8999999999642 222
Q ss_pred ccceEEEEEec
Q 039963 143 ATVYGAIIIYP 153 (578)
Q Consensus 143 ~Gl~G~liV~~ 153 (578)
++|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 58999998863
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.74 E-value=0.0034 Score=53.66 Aligned_cols=38 Identities=16% Similarity=0.403 Sum_probs=30.7
Q ss_pred CCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 521 PPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 521 pp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
.+|....+ +++.||.|.|+|- .|...||.+.+.|.+++
T Consensus 59 ~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~~ 96 (123)
T 1paz_A 59 KINENYVL--TVTQPGAYLVKCT--PHYAMGMIALIAVGDSP 96 (123)
T ss_dssp CTTCCEEE--ECCSCEEEEEECT--TTGGGTCEEEEEESSSC
T ss_pred CCCCEEEE--EeCCCEEEEEEeC--CcccCCCEEEEEEcCCC
Confidence 46765544 4589999999997 59999999999998743
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.61 E-value=0.011 Score=53.15 Aligned_cols=74 Identities=14% Similarity=0.332 Sum_probs=54.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEeccc--cccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHS--RWIR 142 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~--~~~~ 142 (578)
..|.++.|++|++.++|. +..++. ..+.. | + +.-+.||+..++.|.. +++|+|++.|.. +...
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf-----~IP~l----g---i-k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGF-----HVEGT----N---I-NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEE-----EETTS----S---C-EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEE-----EECCC----C---e-EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 444333 32221 1 1 1246799999999986 899999999984 3333
Q ss_pred ccceEEEEEec
Q 039963 143 ATVYGAIIIYP 153 (578)
Q Consensus 143 ~Gl~G~liV~~ 153 (578)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 59999999863
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.59 E-value=0.0035 Score=53.58 Aligned_cols=39 Identities=18% Similarity=0.460 Sum_probs=31.5
Q ss_pred eCCCcEEEEEEEeCCceeEEEEeechhhHhccceEEEEEecCc
Q 039963 520 MPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGD 562 (578)
Q Consensus 520 vpp~~~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 562 (578)
+.+|....+.| +.||.|.|+|- .|...||.+.+.|.+.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGDKR 96 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESSCC
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcCCC
Confidence 35777655544 79999999997 59999999999998744
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.43 E-value=0.012 Score=62.56 Aligned_cols=79 Identities=20% Similarity=0.362 Sum_probs=61.4
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|+.|+|++.|.....+..|.|.+.+.... +.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 467899999999999996422356777776654321 2567888999999999
Q ss_pred CceeEEEEeechhhH-hccceEEEEEec
Q 039963 534 NPGIWFMHCHLDSHL-TWGLAMAFLVEN 560 (578)
Q Consensus 534 npG~w~~HCHil~H~-d~GM~~~~~V~~ 560 (578)
.||.|.++|...-|. +.+|.+.+.|+.
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986654 468999999863
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.37 E-value=0.012 Score=52.97 Aligned_cols=93 Identities=11% Similarity=0.097 Sum_probs=62.8
Q ss_pred EEEe-eCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEecc-----------C--CCCCCCCCCCCCCCCCCcceeEEe
Q 039963 455 LYKL-KFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGF-----------G--NFNPSTDTPKFNLIDPPRRNTIGM 520 (578)
Q Consensus 455 ~~~~-~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~-----------g--~~~~~~~~~~~~~~~p~~rDTv~v 520 (578)
-+++ +.|+.|.|+|.|.+.. |-=-=+|.|-+...+. + .|-+.. ..-.+..+..|
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~-----p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t~~l 126 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQ-----PKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHTKLI 126 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCS-----CHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEECCCB
T ss_pred eEEEecCCCEEEEEEEECCCC-----ccccccceEEeccCcchhhhHHHhhhcccccccccc-------ccchhccceee
Confidence 5788 8999999999997621 1000023454443321 0 111100 01123456678
Q ss_pred CCCcEEEEEEEeC--CceeEEEEeechhhHhccceEEEEEec
Q 039963 521 PPGGWVAIRFVAN--NPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 521 pp~~~~~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
.||+...|.|.++ .||.|-|+|-+--|.. ||-+.++|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999987 8999999999999998 9999999864
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.30 E-value=0.024 Score=48.74 Aligned_cols=92 Identities=13% Similarity=0.187 Sum_probs=63.7
Q ss_pred eEEEeeCC-CEEEEEEEeCCCCC--CCCCCccccCCceEEEEecc-----------C---CCCCCCCCCCCCCCCCCcce
Q 039963 454 KLYKLKFG-SSVQLVWQDTSIVT--VEDHPMHLHGHEFYVVGSGF-----------G---NFNPSTDTPKFNLIDPPRRN 516 (578)
Q Consensus 454 ~~~~~~~g-~~v~~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~~~~~p~~rD 516 (578)
.-++++.| +.|.++|.|.+... .+ +|.|-+...+. + .|-+.. ..-.+..
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m-------~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~-------~~~~~~~ 83 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGM-------GHNWVLAKSADVGDVAKEGAHAGADNNFVTPG-------DKRVIAF 83 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHH-------CBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTT-------CTTCSEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCccccc-------ccceEEecCcchhhhHHHhhhccccccccccc-------cccceee
Confidence 35789999 99999999975221 12 34454444321 0 111100 0112345
Q ss_pred eEEeCCCcEEEEEEEeC---CceeEEEEeechhhHhccceEEEEEec
Q 039963 517 TIGMPPGGWVAIRFVAN---NPGIWFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 517 Tv~vpp~~~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
+..|.||+...+.|+++ .||.|-|.|-+--|.. ||-+.+.|.+
T Consensus 84 t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 84 TPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred eeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 66789999999999987 9999999999999988 8999999864
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.92 E-value=0.03 Score=48.48 Aligned_cols=72 Identities=18% Similarity=0.328 Sum_probs=52.8
Q ss_pred EEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCC
Q 039963 455 LYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANN 534 (578)
Q Consensus 455 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adn 534 (578)
.+.++.|+.|+|++.|.+ ..|. |.|-+. .--+.+.||....+.|+++.
T Consensus 61 ~l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~---------------------~~k~d~~PG~~~~~~~~~~~ 108 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD----VIHG-------FHVEGT---------------------NINVEVLPGEVSTVRYTFKR 108 (135)
T ss_dssp SEEEETTSEEEEEEEBSS----SCEE-------EEETTS---------------------SCEEEECBTBCEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEeCC----ccce-------EEecCC---------------------CceeEeCCCCcEEEEEEcCC
Confidence 378899999999999843 3343 444111 01144567887889999999
Q ss_pred ceeEEEEeec---hhhHhccceEEEEEec
Q 039963 535 PGIWFMHCHL---DSHLTWGLAMAFLVEN 560 (578)
Q Consensus 535 pG~w~~HCHi---l~H~d~GM~~~~~V~~ 560 (578)
||.|.++|.. ..| .+|-+.++|.+
T Consensus 109 ~G~y~~~C~e~CG~~H--~~M~g~v~V~~ 135 (135)
T 2cua_A 109 PGEYRIICNQYCGLGH--QNMFGTIVVKE 135 (135)
T ss_dssp CEEEEEECCSCCSTTS--TTCEEEEEEEC
T ss_pred CEEEEEECcccCCCCc--CCCEEEEEEEC
Confidence 9999999987 666 59999998853
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.89 E-value=0.014 Score=49.78 Aligned_cols=75 Identities=16% Similarity=0.253 Sum_probs=47.9
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
..++++.|++|.|+..+ ..|-+++.. +.+... . ..+.+.+|+...+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~----------~~~p~~--~-----------~~~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIK----------GMIPDG--A-----------EAFKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECT----------TCSCTT--C-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEcc----------cccCCC--c-----------ceeecCCCCEEEEEe--C
Confidence 46789999999987432 145555543 111100 0 011234677665555 8
Q ss_pred CceeEEEEeechhhHhccceEEEEEecCcc
Q 039963 534 NPGIWFMHCHLDSHLTWGLAMAFLVENGDE 563 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GM~~~~~V~~~~~ 563 (578)
.||.|.|+|-+ |.. |.+.+.|.+.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~p~ 95 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDAPA 95 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSSCT
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCCCC
Confidence 99999999987 666 999999987443
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.27 E-value=0.11 Score=44.54 Aligned_cols=93 Identities=12% Similarity=0.127 Sum_probs=61.5
Q ss_pred eEEEe-eCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEecc--------------CCCCCCCCCCCCCCCCC-Cccee
Q 039963 454 KLYKL-KFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGF--------------GNFNPSTDTPKFNLIDP-PRRNT 517 (578)
Q Consensus 454 ~~~~~-~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~--------------g~~~~~~~~~~~~~~~p-~~rDT 517 (578)
.-+++ +.|+.|.++|.|.+.. |---=+|.|.+...+. ..|-+. .++ ....|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~-----p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~t 84 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKM-----AKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKA--------GDTRVIAHT 84 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCC-----CHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCT--------TCTTEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCc-----ccccCcceEEEcCccchhhhHHHhhhhccccccccc--------ccccceeee
Confidence 35788 8899999999997621 1000023454443320 011110 011 12356
Q ss_pred EEeCCCcEEEEEEEeC--Ccee-EEEEeechhhHhccceEEEEEec
Q 039963 518 IGMPPGGWVAIRFVAN--NPGI-WFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 518 v~vpp~~~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
..|.||+...|.|.++ .||. |-|.|-+--|.. ||-+.+.|.+
T Consensus 85 ~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 85 KVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp CCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 6789999999999998 7866 999999999998 8999999853
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.04 E-value=0.12 Score=44.27 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=39.6
Q ss_pred ceeEEeCCCcEEEEEEEeC--Ccee-EEEEeechhhHhccceEEEEEec
Q 039963 515 RNTIGMPPGGWVAIRFVAN--NPGI-WFMHCHLDSHLTWGLAMAFLVEN 560 (578)
Q Consensus 515 rDTv~vpp~~~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~~ 560 (578)
..|..|.||+...+.|.+. .||. |-|.|-+--|.. ||-+.+.|.+
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 4566789999999999988 8995 999999999998 9999999863
No 136
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.93 E-value=0.13 Score=43.51 Aligned_cols=96 Identities=8% Similarity=0.121 Sum_probs=60.3
Q ss_pred EEEeeC-CCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCC-CC-C--CCC-CCCCC-C-CCCCcceeEEeCCCcEE
Q 039963 455 LYKLKF-GSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGN-FN-P--STD-TPKFN-L-IDPPRRNTIGMPPGGWV 526 (578)
Q Consensus 455 ~~~~~~-g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~-~~-~--~~~-~~~~~-~-~~p~~rDTv~vpp~~~~ 526 (578)
-+.++. |++|+++|.|.+.+ |--.=||.|.+...++-. .. . ... ...|- . .......|..|.||+..
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 477865 99999999997622 222224556555322100 00 0 000 00111 0 12356678889999999
Q ss_pred EEEEEeC---CceeEEEEeechhhHhccceEEEEEe
Q 039963 527 AIRFVAN---NPGIWFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 527 ~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 559 (578)
.|.|.+. .+|.|-|-|- -|. ||-+.+.|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999987 8999999999 888 999999873
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.80 E-value=0.13 Score=44.00 Aligned_cols=99 Identities=12% Similarity=0.177 Sum_probs=60.9
Q ss_pred eEEEe-eCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccC------CCCCCCCCCCCCC-CCC-CcceeEEeCCCc
Q 039963 454 KLYKL-KFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFG------NFNPSTDTPKFNL-IDP-PRRNTIGMPPGG 524 (578)
Q Consensus 454 ~~~~~-~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g------~~~~~~~~~~~~~-~~p-~~rDTv~vpp~~ 524 (578)
.-+++ +.|++|.++|.|.+.. |---=+|.|.+...+.- ...... ...|-. .++ ....|-.|.||+
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~-----p~~~m~H~~vi~~~~~~~~~~~~~m~~~~-~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSL-----PKNVMGHNLVISKEADMQPIATDGLSAGI-DKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSC-----CHHHHCBCCEEEEGGGHHHHHHHHTTTCG-GGTTSCTTCTTEEEECCCBCTTC
T ss_pred CEEEEecCCCEEEEEEEECCCC-----cccCCCceEEEccccchhhHHHHHhhccc-cccccccccchhheeeeeeCCCC
Confidence 35788 8999999999997621 10001234444332210 000000 000000 111 233555799999
Q ss_pred EEEEEEEeC--Ccee-EEEEeechhhHhccceEEEEEe
Q 039963 525 WVAIRFVAN--NPGI-WFMHCHLDSHLTWGLAMAFLVE 559 (578)
Q Consensus 525 ~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 559 (578)
...|.|.+. .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 999999987 7886 999999999999 899999873
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.52 E-value=0.14 Score=45.98 Aligned_cols=74 Identities=15% Similarity=0.278 Sum_probs=55.7
Q ss_pred EEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeCC
Q 039963 455 LYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANN 534 (578)
Q Consensus 455 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~adn 534 (578)
-+.++.|+.|++.+.|. +..|.|-+=.... -+.+.||....+.|+++.
T Consensus 94 ~l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~k 141 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKR 141 (168)
T ss_dssp SEEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCS
T ss_pred EEEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCC
Confidence 36789999999999984 3556654432211 123457887889999999
Q ss_pred ceeEEEEeec-hhhHhccceEEEEEec
Q 039963 535 PGIWFMHCHL-DSHLTWGLAMAFLVEN 560 (578)
Q Consensus 535 pG~w~~HCHi-l~H~d~GM~~~~~V~~ 560 (578)
||.|.+.|.. --+-+.+|.+.+.|+|
T Consensus 142 pG~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 142 PGEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred CEEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 9999999985 4466789999999864
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=86.80 E-value=5.2 Score=33.39 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=51.4
Q ss_pred cCcE--EEEEEEEcCCCCcEEEEEe-CceeE--EEeecCcccc--------eeEeeEEEEccCceEEEEEEeCC--CCce
Q 039963 224 AGET--VLLRIINAAMNQELFFGVA-NHNLT--VVGVDTSYTK--------AFSTSVIMIAPGQTTNVLLTADQ--PPAR 288 (578)
Q Consensus 224 ~G~~--~rlrliN~~~~~~~~~~l~-gh~~~--via~DG~~~~--------p~~~d~v~l~pger~dv~v~~~~--~~G~ 288 (578)
.|+. +.|.+.|.+ ...+.+.+. |+.+. |...+|..+- .+......|.|||...+....++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s-~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQS-ERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECS-SSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCC-CCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 4444 467788998 566677775 66544 4444576541 34567899999999999999884 5799
Q ss_pred eEEEEeec
Q 039963 289 YYMAARAY 296 (578)
Q Consensus 289 y~i~~~~~ 296 (578)
|.+..-..
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99998753
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=77.64 E-value=9.8 Score=31.71 Aligned_cols=37 Identities=11% Similarity=0.283 Sum_probs=25.6
Q ss_pred CCCCCCc---ccccccCCCCeEEEEEEecC--CCcceeEecc
Q 039963 101 WADGPEY---VTQCPIQPGRSYTYQFTIEG--QEGTLWWHAH 137 (578)
Q Consensus 101 ~~DG~~~---~~~~~i~PG~~~~y~~~~~~--~~Gt~~YH~h 137 (578)
|+||-.. .....|+||++.+|....++ .+|+|..+.-
T Consensus 59 wS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 59 YSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp TTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred ccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 4555332 33446999999999999853 5799876543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=70.25 E-value=14 Score=33.86 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=43.4
Q ss_pred EEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEeec
Q 039963 219 RFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAY 296 (578)
Q Consensus 219 ~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~~ 296 (578)
.+.+..|+.+||+|.+.. -.|.|.+.....++ .+-||..-.+.+.++ .+|.|...|.-+
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG~y~g~CsE~ 100 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGICAEI 100 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSEEEEEEECSC
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeC-CCeEEEEEcccc
Confidence 589999999999998875 34455555333332 344788888888888 689999999843
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=62.88 E-value=16 Score=35.59 Aligned_cols=77 Identities=13% Similarity=0.149 Sum_probs=55.7
Q ss_pred ceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe
Q 039963 453 TKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 453 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~a 532 (578)
.+-+.++.|+.|++.+.+.+ ..|.|.+-....+ +.+-||....+.|.+
T Consensus 188 dN~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~k----------------------------~daiPG~~n~~~~~~ 235 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTATD----VIHAWTIPAFAVK----------------------------QDAVPGRIAQLWFSV 235 (298)
T ss_dssp SSCEEEESSSEEEEEEEESS----SCEEEEEGGGTEE----------------------------EEECTTCCEEEEEEC
T ss_pred cceEEEEcCCEEEEEEEeCC----ccceeeEcccCce----------------------------EEecCCceEEEEEEe
Confidence 35678999999999999854 5566555332221 223467777899999
Q ss_pred CCceeEEEEeechh-hHhccceEEEEEecC
Q 039963 533 NNPGIWFMHCHLDS-HLTWGLAMAFLVENG 561 (578)
Q Consensus 533 dnpG~w~~HCHil~-H~d~GM~~~~~V~~~ 561 (578)
+.||.|...|.-.- .-+..|-..++|.+.
T Consensus 236 ~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 236 DQEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 99999999998655 446777778887654
No 143
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=62.12 E-value=17 Score=36.00 Aligned_cols=59 Identities=19% Similarity=0.419 Sum_probs=34.6
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCcee--------EEeccccc--CCCCCCC------CCCcccccccCCCCeEEEEEE
Q 039963 61 QFPGPTLQVRDGDTLIITTINRAQYNIT--------LHWHGVNL--KGNPWAD------GPEYVTQCPIQPGRSYTYQFT 124 (578)
Q Consensus 61 ~~PgP~i~v~~Gd~v~v~l~N~l~~~~s--------iH~HG~~~--~~~~~~D------G~~~~~~~~i~PG~~~~y~~~ 124 (578)
.+||-++ ++.++++|+.+.+.. ++|---.+ ....+.| |..-..+.||+|||+.+...+
T Consensus 260 ~vpgR~l------~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~ 333 (382)
T 1yew_A 260 RVPGRAM------RMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVT 333 (382)
T ss_dssp ESSCSEE------EEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEE
T ss_pred ecCCcEE------EEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEE
Confidence 4888888 456888999876533 33322111 1111111 221123567999999999998
Q ss_pred e
Q 039963 125 I 125 (578)
Q Consensus 125 ~ 125 (578)
+
T Consensus 334 a 334 (382)
T 1yew_A 334 A 334 (382)
T ss_dssp E
T ss_pred e
Confidence 7
No 144
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=59.80 E-value=18 Score=33.13 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=52.8
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
+-+.++.|+.|++.+.+.+ ..|.|-+=....+ +.+-||....+.|.++
T Consensus 41 n~l~lP~g~~V~~~lTS~D----ViHSF~IP~lgvK----------------------------~daiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS----VMHSFFIPRLGSQ----------------------------IYAMAGMQTRLHLIAN 88 (205)
T ss_dssp SEEEEETTSCEEEEEEESS----SCEEEEEGGGTEE----------------------------EEECTTCCEEEEECCS
T ss_pred ceEEEeCCCEEEEEEecCC----ceeeEEecccCcE----------------------------EEecCCceEEEEEEeC
Confidence 4578999999999999854 4555444322211 2233677788899999
Q ss_pred CceeEEEEeechhhH-hccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHL-TWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~-d~GM~~~~~V~ 559 (578)
.||.|...|-..-.. ...|-..++|.
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CCeEEEEEcccccccchhhceEEEEEE
Confidence 999999999876655 45666777776
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=57.25 E-value=34 Score=32.67 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=51.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEecccc--ccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSR--WIR 142 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~--~~~ 142 (578)
..|.+..|+.|++.+++. +.- ||..++.- ++ +.-+-||..-+..|.+ +++|+|+..|..- ...
T Consensus 171 n~l~lP~g~~v~~~~tS~-DVi-----Hsf~ip~l-------~~-k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVI-----HSWTVPAF-------GV-KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSC-----EEEEEGGG-------TE-EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC-ccc-----ceeeeccc-------Cc-eEEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 369999999999999987 332 33332211 11 1235689999999976 8999999998742 222
Q ss_pred ccceEEEEEecC
Q 039963 143 ATVYGAIIIYPR 154 (578)
Q Consensus 143 ~Gl~G~liV~~~ 154 (578)
+.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 478888877654
No 146
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=56.46 E-value=25 Score=35.22 Aligned_cols=57 Identities=21% Similarity=0.332 Sum_probs=35.3
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCcee--------EEeccccc--CCCCC------CCCCCcccccccCCCCeEEEEEE
Q 039963 61 QFPGPTLQVRDGDTLIITTINRAQYNIT--------LHWHGVNL--KGNPW------ADGPEYVTQCPIQPGRSYTYQFT 124 (578)
Q Consensus 61 ~~PgP~i~v~~Gd~v~v~l~N~l~~~~s--------iH~HG~~~--~~~~~------~DG~~~~~~~~i~PG~~~~y~~~ 124 (578)
+.||-++ ++.++++|+.+.+.. ++|-.-.. ....+ .+|.. ++.||+|||+.+.+.+
T Consensus 294 ~vpgR~l------~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~--s~~pI~PGETrt~~V~ 365 (419)
T 3rfr_A 294 KVPGREL------TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS--NDDVIAPGESKEIVVK 365 (419)
T ss_dssp ESSSSEE------EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC--CCCCBCTTCEEEEEEE
T ss_pred ecCCcEE------EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC--CCCCcCCCcceEEEEE
Confidence 4788888 456889999876533 33322111 11111 12544 4449999999999998
Q ss_pred e
Q 039963 125 I 125 (578)
Q Consensus 125 ~ 125 (578)
+
T Consensus 366 a 366 (419)
T 3rfr_A 366 I 366 (419)
T ss_dssp E
T ss_pred e
Confidence 7
No 147
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=55.71 E-value=40 Score=32.79 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=52.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEecccc--ccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSR--WIR 142 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~--~~~ 142 (578)
..|.+..|+.|++.+++.. .-|+ ..++.- ++ +.-+-||...+..|.+ +++|+|...|..- ...
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHs-----f~iP~l-------g~-k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHA-----WTIPAF-------AV-KQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEE-----EEEGGG-------TE-EEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC-ccce-----eeEccc-------Cc-eEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999963 2222 222211 11 1235689999999976 8999999999842 223
Q ss_pred ccceEEEEEecCC
Q 039963 143 ATVYGAIIIYPRI 155 (578)
Q Consensus 143 ~Gl~G~liV~~~~ 155 (578)
+.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 4788888887654
No 148
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=54.80 E-value=24 Score=33.71 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=54.2
Q ss_pred ceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe
Q 039963 453 TKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 453 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~a 532 (578)
.+.+.++.|+.|++.+.+.+ ..|.|-+-....+ .| +-||....+.|++
T Consensus 170 dn~l~lP~g~~v~~~~tS~D----ViHsf~ip~l~~k-------------------------~d---a~PG~~n~~~~~~ 217 (262)
T 2gsm_B 170 DTAMVVPVNKTVVVQVTGAD----VIHSWTVPAFGVK-------------------------QD---AVPGRLAQLWFRA 217 (262)
T ss_dssp SSCEEEETTSEEEEEEEESS----SCEEEEEGGGTEE-------------------------EE---ECBTCCEEEEEEC
T ss_pred cceEEEecCCEEEEEEEECc----ccceeeecccCce-------------------------EE---ecCCceeEEEEec
Confidence 34578999999999999854 5565554332221 23 3366677889999
Q ss_pred CCceeEEEEeechhhH-hccceEEEEEecC
Q 039963 533 NNPGIWFMHCHLDSHL-TWGLAMAFLVENG 561 (578)
Q Consensus 533 dnpG~w~~HCHil~H~-d~GM~~~~~V~~~ 561 (578)
+.||.|...|--.--. +..|-..++|.+.
T Consensus 218 ~~~G~y~g~Cse~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 218 EREGIFFGQCSELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp CSCEEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred CCcEEEEEEChHhcccCcccCeEEEEEEcH
Confidence 9999999999866544 5567777777653
No 149
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=46.79 E-value=26 Score=28.21 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=33.9
Q ss_pred EEEEEEEeCCCCce---eEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEe-cCCCcce
Q 039963 74 TLIITTINRAQYNI---TLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTI-EGQEGTL 132 (578)
Q Consensus 74 ~v~v~l~N~l~~~~---siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~-~~~~Gt~ 132 (578)
.++|.|+|-|+.+. .++.-|.-.. .+ -......|.||++.++++.. +..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 67899999998653 4555453221 11 01112359999999999988 5667753
No 150
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=43.73 E-value=74 Score=24.99 Aligned_cols=69 Identities=10% Similarity=0.078 Sum_probs=38.8
Q ss_pred EEecCcEEEEEEEEcCCCCcEEEEEeC--ceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCC--CceeEEEEee
Q 039963 221 QVEAGETVLLRIINAAMNQELFFGVAN--HNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQP--PARYYMAARA 295 (578)
Q Consensus 221 ~v~~G~~~rlrliN~~~~~~~~~~l~g--h~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~--~G~y~i~~~~ 295 (578)
.-++||++++|++--... .... .+ -.+++...+|+.+. .-.........+...+..++. .|.|.|+...
T Consensus 12 iYrPGetV~~~~~~~~~~-~~p~--~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDEN-FHPL--NELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGG-GCBC--CCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCC-CcCC--CCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 368999999998755421 1111 11 13455555665331 112222344566677777643 4999999874
No 151
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=43.46 E-value=41 Score=28.16 Aligned_cols=69 Identities=22% Similarity=0.381 Sum_probs=39.9
Q ss_pred EEECCcCCCceEEEecCCEEEEEEE---eCCCCceeEEec----ccccCC-CCCCCCCCcccccccCCCCeEEEEEEe
Q 039963 56 VTVNGQFPGPTLQVRDGDTLIITTI---NRAQYNITLHWH----GVNLKG-NPWADGPEYVTQCPIQPGRSYTYQFTI 125 (578)
Q Consensus 56 ~~~NG~~PgP~i~v~~Gd~v~v~l~---N~l~~~~siH~H----G~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~~~~ 125 (578)
..++|- +.+.=.++.|..+.|.+. |..........| |+..+- ....|+-.....|||.+|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 345542 235567788888887776 222222222233 444321 122455432357999999999999877
No 152
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=42.85 E-value=35 Score=31.74 Aligned_cols=76 Identities=9% Similarity=0.179 Sum_probs=53.0
Q ss_pred ceEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe
Q 039963 453 TKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVA 532 (578)
Q Consensus 453 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~a 532 (578)
.+.+.++.|+.|++.+.+.+ ..|.|-+=....+ .|. -||..-.+.|++
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D----ViHsf~vP~lg~K-------------------------~Da---iPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED----VLHSWAVPSLGLK-------------------------TDA---IPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS----SCEEEEEGGGTEE-------------------------EEE---CTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEeCc----ccceeeecccCcE-------------------------EEe---cCCceEEEEEec
Confidence 35678999999999999854 5565554332221 232 356667788999
Q ss_pred CCceeEEEEeechhhH-hccceEEEEEec
Q 039963 533 NNPGIWFMHCHLDSHL-TWGLAMAFLVEN 560 (578)
Q Consensus 533 dnpG~w~~HCHil~H~-d~GM~~~~~V~~ 560 (578)
+.||.|...|.-.-.. +.-|-..++|.+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEEc
Confidence 9999999999866544 455666777654
No 153
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=41.21 E-value=50 Score=27.60 Aligned_cols=68 Identities=16% Similarity=0.359 Sum_probs=39.1
Q ss_pred EECCcCCCceEEEecCCEEEEEEEeCC---CCc--eeEEe--cccccCC-CCCCCCCCcccccccCCCCeEEEEEEe
Q 039963 57 TVNGQFPGPTLQVRDGDTLIITTINRA---QYN--ITLHW--HGVNLKG-NPWADGPEYVTQCPIQPGRSYTYQFTI 125 (578)
Q Consensus 57 ~~NG~~PgP~i~v~~Gd~v~v~l~N~l---~~~--~siH~--HG~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~~~~ 125 (578)
.++|--+.+.=.++.|..+.|.+.=.. ... +.+|+ .|+..+- ....|+-.+ ..|||.+|+.++|.+.+
T Consensus 17 ~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 17 MVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 444421334566788888887776222 122 22332 3444332 112455433 67999999999999776
No 154
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=38.58 E-value=81 Score=29.26 Aligned_cols=75 Identities=8% Similarity=-0.013 Sum_probs=49.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeEecccc--ccc
Q 039963 65 PTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSR--WIR 142 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h~~--~~~ 142 (578)
..+.+..|..|++.++.. +.-|+ ..++.- ++. .-.-||..-+..|.+ +++|+|+..|..- ...
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHs-----f~vP~l-------g~K-~DaiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHS-----WAVPSL-------GLK-TDAIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEE-----EEEGGG-------TEE-EEECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeC-cccce-----eeeccc-------CcE-EEecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 579999999999999986 33333 222211 111 135679888888975 8999999988742 222
Q ss_pred ccceEEEEEecC
Q 039963 143 ATVYGAIIIYPR 154 (578)
Q Consensus 143 ~Gl~G~liV~~~ 154 (578)
+-|.+.+.|.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 367777776654
No 155
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=35.69 E-value=94 Score=25.29 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=29.6
Q ss_pred EEEEEEEEcCCCCc-EEEEEeCc-eeEEEeecCcccceeEeeEEEEccCceEEEEEEe
Q 039963 227 TVLLRIINAAMNQE-LFFGVANH-NLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTA 282 (578)
Q Consensus 227 ~~rlrliN~~~~~~-~~~~l~gh-~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~ 282 (578)
.|+|+|+|.+.... +.+.+.|. .+.+++ + ..+.|.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 68999999994433 45666553 233322 1 14999999977766554
No 156
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=28.98 E-value=1.9e+02 Score=23.49 Aligned_cols=67 Identities=15% Similarity=0.045 Sum_probs=35.8
Q ss_pred CceEEEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCC----cc----cccccCCCCeEEEEEEecCCCcc
Q 039963 64 GPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPE----YV----TQCPIQPGRSYTYQFTIEGQEGT 131 (578)
Q Consensus 64 gP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~----~~----~~~~i~PG~~~~y~~~~~~~~Gt 131 (578)
|-+|.++.||++.|.|.-+.....+=......-...--.+|.. +. ....+..|.+..+.|++ ..+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCce
Confidence 4579999999999999976544333333221000000011110 00 00124557788888886 67776
No 157
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=27.51 E-value=62 Score=31.70 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=41.7
Q ss_pred EEEEecCcEEEEEEEEcCCCCcEEEEEeCceeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCCCceeEEEEee
Q 039963 219 RFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARA 295 (578)
Q Consensus 219 ~l~v~~G~~~rlrliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~~~ 295 (578)
.+.+..|+.+||++.... -.|.|.+.....++ ..-||..-.+.+.++ .||.|...|.-
T Consensus 152 ~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~-~~G~y~g~CsE 209 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS--VMNSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGISAS 209 (315)
T ss_dssp BCCCCSSSEEEEEECBSS--SCEEEEEGGGTEEE----------------EECBTSCEEEEEECC-SCBCCEEBCCS
T ss_pred eEEEeCCCEEEEEEEeCC--ccceeeecccCcEE----------------eecCCcceeeEEecC-CCeEEEEeccc
Confidence 578999999999887554 34455554333322 344788888888888 78999999984
No 158
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=26.84 E-value=77 Score=26.91 Aligned_cols=69 Identities=10% Similarity=-0.069 Sum_probs=0.0
Q ss_pred EEecCCEEEEEEEeCCCCceeEEecccccCCCCCCCCCCcc----------cccccCCCCeEEEEEEecCCCcceeEecc
Q 039963 68 QVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYV----------TQCPIQPGRSYTYQFTIEGQEGTLWWHAH 137 (578)
Q Consensus 68 ~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~----------~~~~i~PG~~~~y~~~~~~~~Gt~~YH~h 137 (578)
+++.||+|+.+..+. .+.|..+ ...++..-.+-...|++-+.+|++||-|-
T Consensus 31 ~F~vGD~LvF~y~~~-------------------~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~~~G~~YFicg 91 (138)
T 1jer_A 31 TFRVGDSLQFNFPAN-------------------AHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCT 91 (138)
T ss_dssp CEETTCEEEECCCTT-------------------TCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECCSSEEEEEECC
T ss_pred cCcCCCEEEEeecCC-------------------CceEEEeCchhhcCccCCCCccccccCCCeEEEeccCCcCEEEEcC
Q ss_pred cccccc-cceEEEEEecCC
Q 039963 138 SRWIRA-TVYGAIIIYPRI 155 (578)
Q Consensus 138 ~~~~~~-Gl~G~liV~~~~ 155 (578)
..++=. ||..+|.|....
T Consensus 92 ~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 92 VGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp STTTGGGTCEEEEEEECCC
T ss_pred CCCccccCCEEEEEEcCCC
No 159
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=26.66 E-value=1.3e+02 Score=24.87 Aligned_cols=72 Identities=22% Similarity=0.303 Sum_probs=41.4
Q ss_pred ECCcCCCc------eEEEecC-CEEEEEEEeCCCCcee--EEecccccCCCCCCC-----C----CCcccccccCCCCeE
Q 039963 58 VNGQFPGP------TLQVRDG-DTLIITTINRAQYNIT--LHWHGVNLKGNPWAD-----G----PEYVTQCPIQPGRSY 119 (578)
Q Consensus 58 ~NG~~PgP------~i~v~~G-d~v~v~l~N~l~~~~s--iH~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~ 119 (578)
.+..+||- .|.+++| .+++|.+.|..+.|.- -|+|=....+.-..| | .|.-|..-..||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ubp_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 34456662 5777787 5899999999987765 455544332211111 1 112223346788888
Q ss_pred EEEEEecCCCcc
Q 039963 120 TYQFTIEGQEGT 131 (578)
Q Consensus 120 ~y~~~~~~~~Gt 131 (578)
+-+. + .-.|.
T Consensus 84 ~V~L-V-~~~G~ 93 (126)
T 4ubp_B 84 EVEL-T-ELGGN 93 (126)
T ss_dssp EEEE-E-ECCTT
T ss_pred EEEE-E-EccCC
Confidence 8777 4 34454
No 160
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=26.66 E-value=1.3e+02 Score=24.87 Aligned_cols=72 Identities=22% Similarity=0.303 Sum_probs=41.4
Q ss_pred ECCcCCCc------eEEEecC-CEEEEEEEeCCCCcee--EEecccccCCCCCCC-----C----CCcccccccCCCCeE
Q 039963 58 VNGQFPGP------TLQVRDG-DTLIITTINRAQYNIT--LHWHGVNLKGNPWAD-----G----PEYVTQCPIQPGRSY 119 (578)
Q Consensus 58 ~NG~~PgP------~i~v~~G-d~v~v~l~N~l~~~~s--iH~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~ 119 (578)
.+..+||- .|.+++| .+++|.+.|..+.|.- -|+|=....+.-..| | .|.-|..-..||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ac7_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 34456662 5777787 5899999999987765 455544332211111 1 112223346788888
Q ss_pred EEEEEecCCCcc
Q 039963 120 TYQFTIEGQEGT 131 (578)
Q Consensus 120 ~y~~~~~~~~Gt 131 (578)
+-+. + .-.|.
T Consensus 84 ~V~L-V-~~~G~ 93 (126)
T 4ac7_B 84 EVEL-T-ELGGN 93 (126)
T ss_dssp EEEE-E-ECCTT
T ss_pred EEEE-E-EccCC
Confidence 8777 4 34454
No 161
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=24.10 E-value=80 Score=29.43 Aligned_cols=50 Identities=26% Similarity=0.327 Sum_probs=33.4
Q ss_pred ceEEEecCCEEEEEEEeCCC------CceeEEecccccCCCCCCCCCCcccccccCCCCeEEE
Q 039963 65 PTLQVRDGDTLIITTINRAQ------YNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTY 121 (578)
Q Consensus 65 P~i~v~~Gd~v~v~l~N~l~------~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 121 (578)
-+|+.+-|-++.|.|.|..+ .+.++...|....-+ .-++.-+.|||++|.
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-------aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-------AGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-------TTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-------CCCEEEECCCCeEec
Confidence 36888888888999999863 356677766653322 112345899998764
No 162
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=23.58 E-value=82 Score=26.33 Aligned_cols=46 Identities=20% Similarity=0.351 Sum_probs=0.0
Q ss_pred EEEEEeCCCCc---eeEEecccccCCCCC---CCCCCcccccccCCCCeEEEE
Q 039963 76 IITTINRAQYN---ITLHWHGVNLKGNPW---ADGPEYVTQCPIQPGRSYTYQ 122 (578)
Q Consensus 76 ~v~l~N~l~~~---~siH~HG~~~~~~~~---~DG~~~~~~~~i~PG~~~~y~ 122 (578)
+|++.|....+ .+-||.=....+.-. .+||-|-.. -|.||++|+|.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP-~L~PGe~f~Yt 85 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQP-WLRPGEAFHYT 85 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCC-EECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCC-cCCCCCceEEe
No 163
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=23.10 E-value=51 Score=32.34 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=51.9
Q ss_pred eEEEeeCCCEEEEEEEeCCCCCCCCCCccccCCceEEEEeccCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEeC
Q 039963 454 KLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVAN 533 (578)
Q Consensus 454 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~~~~~irf~ad 533 (578)
+-+.++.|+.|++.+... +..|.|.+=....+ .| +-||-...+.|+++
T Consensus 151 n~l~lP~g~~V~~~lTS~----DViHsf~IP~lg~k-------------------------~D---aiPGr~n~~~~~~~ 198 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN----SVMNSFFIPRLGSQ-------------------------IY---AMAGMQTRLHLIAN 198 (315)
T ss_dssp SBCCCCSSSEEEEEECBS----SSCEEEEEGGGTEE-------------------------EE---ECBTSCEEEEEECC
T ss_pred ceEEEeCCCEEEEEEEeC----CccceeeecccCcE-------------------------Ee---ecCCcceeeEEecC
Confidence 456789999999999874 35565554432221 23 23666778899999
Q ss_pred CceeEEEEeechhhH-hccceEEEEEe
Q 039963 534 NPGIWFMHCHLDSHL-TWGLAMAFLVE 559 (578)
Q Consensus 534 npG~w~~HCHil~H~-d~GM~~~~~V~ 559 (578)
.||.|...|--.--. +..|-..++|.
T Consensus 199 ~~G~y~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 199 EPGTYDGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp SCBCCEEBCCSCCSTTTTTCCEECCBC
T ss_pred CCeEEEEeccccchhhHHhccceEEEe
Confidence 999999999866644 45666777776
No 164
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=22.61 E-value=32 Score=28.89 Aligned_cols=18 Identities=33% Similarity=0.412 Sum_probs=15.6
Q ss_pred EEEEecCcEEEEEEEEcC
Q 039963 219 RFQVEAGETVLLRIINAA 236 (578)
Q Consensus 219 ~l~v~~G~~~rlrliN~~ 236 (578)
-++|+.||+|||.+.|-+
T Consensus 72 ~InV~~GETVrF~v~nkt 89 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKI 89 (131)
T ss_dssp EEEEETTCEEEEEETTEE
T ss_pred EEEecCCCEEEEEeCCcE
Confidence 389999999999888765
No 165
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=21.50 E-value=1.6e+02 Score=27.46 Aligned_cols=14 Identities=21% Similarity=0.510 Sum_probs=11.6
Q ss_pred eeEEEEccCceEEE
Q 039963 265 TSVIMIAPGQTTNV 278 (578)
Q Consensus 265 ~d~v~l~pger~dv 278 (578)
...|.|.|||++.+
T Consensus 171 G~~i~L~PGESiTl 184 (246)
T 3kmh_A 171 GSQLRLSPGESICL 184 (246)
T ss_dssp TCEEEECTTCEEEE
T ss_pred CCEEEECCCCeEec
Confidence 46889999999875
No 166
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=20.98 E-value=2.5e+02 Score=21.42 Aligned_cols=45 Identities=7% Similarity=0.002 Sum_probs=31.9
Q ss_pred eeEEEeecCcccceeEeeEEEEccCceEEEEEEeCCCCceeEEEE
Q 039963 249 NLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAA 293 (578)
Q Consensus 249 ~~~via~DG~~~~p~~~d~v~l~pger~dv~v~~~~~~G~y~i~~ 293 (578)
.++|+..||.+++-..++-=...-+|-+.+.....+.-|.+.+.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 467888899888766666666666777777776665567666655
No 167
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=20.86 E-value=2.8e+02 Score=27.34 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=44.1
Q ss_pred CcEEEEEEEEcCCCCcEEE-E---EeC---ceeEEEeecCcccc----------eeEeeEEEEccCceEEEEEEeCC---
Q 039963 225 GETVLLRIINAAMNQELFF-G---VAN---HNLTVVGVDTSYTK----------AFSTSVIMIAPGQTTNVLLTADQ--- 284 (578)
Q Consensus 225 G~~~rlrliN~~~~~~~~~-~---l~g---h~~~via~DG~~~~----------p~~~d~v~l~pger~dv~v~~~~--- 284 (578)
+-.+..-|-|.|... +.| + +++ ..|.| ..||..++ |...+-+.|.|||++++.++...
T Consensus 37 ~~~vk~tvtN~g~~~-~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKP-IRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSC-EEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCc-eEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccc
Confidence 345667777777433 332 1 222 24555 46775541 22346899999999999999864
Q ss_pred --CCceeEEEEee
Q 039963 285 --PPARYYMAARA 295 (578)
Q Consensus 285 --~~G~y~i~~~~ 295 (578)
.+|+|.+....
T Consensus 115 Ls~gG~y~v~~~g 127 (343)
T 2x3c_A 115 MSAQGQYSIRYQL 127 (343)
T ss_dssp CCSCEEEEEEEC-
T ss_pred cCCCceEEEEEee
Confidence 35899998864
Done!