Citrus Sinensis ID: 039963

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
MDIPALITVKPWSSCLLLGVLFIFAFVASLSHAEIQFHEFIEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQAVQSPPLDLPPC
cccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEECcccccccCEEEEEcccccccEEEEECccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccEEEEEECccccccEEEcccccccccccEEEEEEccccccccccccccccEEEEEEccccccHHHHHHHHHHccccccccccEEEcccccccccccccccEEEEEEcccEEEEEEEEEcccccEEEEEcccEEEEEEEccccccEEEEcCEEEccccEEEEEEEccccccccEEEEEEccccccccccccEEEEEEEccccccccccccccccccccccccccccHHHHccccccccccccccccccccccEEEEEccccccccccccccccccccEEEEEEEEEEEccccccHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEcccccccccccccccccccEEEECcccccccccccccccccccccccEEEcccccEEEEEEEccccEEcHHHHccHHHHHHccEEEEEEEccccccccccccccccccc
****ALITVKPWSSCLLLGVLFIFAFVASLSHAEIQFHEFIEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAP**************FPTLPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENG******VQSPPLDLPPC
xxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDIPALITVKPWSSCLLLGVLFIFAFVASLSHAEIQFHEFIEAKPVKRLCRTHNTVTVNGQFPGPTLQVRDGDTLIITTINRAQYNITLHWHGVNLKGNPWADGPEYVTQCPIQPGRSYTYQFTIEGQEGTLWWHAHSRWIRATVYGAIIIYPRIGSSYPFPVPNREIPILLGEWWDKNPMDVLMQAIFTGAAPNVSDAFTINGQPGDLYRCSRRETVRFQVEAGETVLLRIINAAMNQELFFGVANHNLTVVGVDTSYTKAFSTSVIMIAPGQTTNVLLTADQPPARYYMAARAYNSANVAFDNTTTTAILAYKSAPCNAKNGGSNSSAPVFPTLPGFNDTATATAYTAQIRSLHEVKVPTVIDEDLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNVSFEFPTGNSLMQAYFQDQPGVFTTDFPPVPPIKFDYTGNVSRVLWQPLKGTKLYKLKFGSSVQLVWQDTSIVTVEDHPMHLHGHEFYVVGSGFGNFNPSTDTPKFNLIDPPRRNTIGMPPGGWVAIRFVANNPGIWFMHCHLDSHLTWGLAMAFLVENGDEELQAVQSPPLDLPPC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Laccase-3 Lignin degradation and detoxification of lignin-derived products.confidentQ56YT0
Laccase-3 Lignin degradation and detoxification of lignin-derived products.probableQ941X2
Laccase-13 Lignin degradation and detoxification of lignin-derived products.probableQ9LYQ2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.10.-.-Acting on diphenols and related substances as donors.probable
1.10.3.-With oxygen as acceptor.probable
1.10.3.2Laccase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ZX1, chain A
Confidence level:very confident
Coverage over the Query: 31-207,218-319,332-335,351-407,453-560
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Template: 2J5W, chain A
Confidence level:very confident
Coverage over the Query: 34-319
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Template: 1ZPU, chain A
Confidence level:very confident
Coverage over the Query: 34-207,218-377,390-434,448-578
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Template: 3SQR, chain A
Confidence level:very confident
Coverage over the Query: 32-320,333-373,391-429,451-559
View the alignment between query and template
View the model in PyMOL
Template: 3FPX, chain A
Confidence level:confident
Coverage over the Query: 52-319,332-335,346-362,376-562
View the alignment between query and template
View the model in PyMOL