Query 039968
Match_columns 165
No_of_seqs 124 out of 1177
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 05:34:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_E T-complex protein 1 sub 100.0 8.2E-39 2.8E-43 283.0 16.7 154 7-165 322-488 (515)
2 1we3_A CPN60(groel); chaperoni 100.0 2.7E-38 9.2E-43 281.3 17.7 163 2-165 301-498 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 3.3E-39 1.1E-43 287.1 11.6 161 2-165 301-494 (546)
4 3iyg_Z T-complex protein 1 sub 100.0 1.5E-38 5.2E-43 281.4 15.7 153 7-165 327-490 (517)
5 3ruv_A Chaperonin, CPN; double 100.0 1.9E-38 6.5E-43 282.2 16.3 154 7-165 328-492 (543)
6 1kp8_A Groel protein; chaperon 100.0 2.9E-38 1E-42 281.2 16.5 161 3-165 303-496 (547)
7 3iyg_H T-complex protein 1 sub 100.0 3.2E-38 1.1E-42 279.3 16.5 154 7-165 324-487 (515)
8 1iok_A Chaperonin 60; chaperon 100.0 1.3E-38 4.4E-43 283.4 13.9 162 3-165 304-498 (545)
9 3ko1_A Chaperonin; 9-fold symm 100.0 2.9E-38 9.9E-43 281.6 14.6 154 7-165 342-506 (553)
10 3iyg_G T-complex protein 1 sub 100.0 5.4E-38 1.8E-42 277.8 15.9 154 7-165 322-487 (515)
11 3aq1_B Thermosome subunit; gro 100.0 1.2E-37 4.2E-42 274.7 17.9 154 7-165 286-449 (500)
12 3p9d_E T-complex protein 1 sub 100.0 3E-38 1E-42 281.9 14.0 154 7-165 365-531 (562)
13 3iyg_D T-complex protein 1 sub 100.0 8.6E-38 2.9E-42 276.7 16.5 154 7-165 326-491 (518)
14 3iyg_A T-complex protein 1 sub 100.0 6.8E-38 2.3E-42 277.9 15.9 152 9-165 332-501 (529)
15 3iyg_B T-complex protein 1 sub 100.0 7.7E-38 2.6E-42 276.7 15.8 154 7-165 321-484 (513)
16 3p9d_A T-complex protein 1 sub 100.0 6.5E-38 2.2E-42 279.6 15.4 156 5-165 343-521 (559)
17 3iyg_Q T-complex protein 1 sub 100.0 1.5E-37 5.1E-42 274.8 16.4 154 7-165 319-485 (512)
18 3p9d_F T-complex protein 1 sub 100.0 2.4E-38 8.2E-43 281.7 10.8 154 7-165 339-510 (546)
19 1a6d_B Thermosome (beta subuni 100.0 4.8E-37 1.7E-41 273.2 16.1 154 7-165 333-496 (543)
20 1q3q_A Thermosome alpha subuni 100.0 4.1E-37 1.4E-41 273.9 15.5 154 7-165 335-498 (548)
21 3p9d_C T-complex protein 1 sub 100.0 1.3E-37 4.4E-42 279.1 12.2 158 7-165 339-559 (590)
22 3p9d_B T-complex protein 1 sub 100.0 3.8E-38 1.3E-42 279.4 8.4 154 7-165 328-491 (527)
23 1a6d_A Thermosome (alpha subun 100.0 4.9E-37 1.7E-41 273.3 14.6 154 7-165 332-495 (545)
24 3p9d_G T-complex protein 1 sub 100.0 1.6E-37 5.5E-42 276.7 9.7 154 7-165 337-500 (550)
25 3p9d_D T-complex protein 1 sub 100.0 5.4E-37 1.8E-41 272.1 8.5 154 7-165 335-501 (528)
26 3p9d_H T-complex protein 1 sub 100.0 4.1E-37 1.4E-41 274.9 6.4 154 7-165 343-521 (568)
27 3osx_A 60 kDa chaperonin; alph 97.7 2.2E-05 7.6E-10 61.2 3.5 32 2-33 125-156 (201)
28 3m6c_A 60 kDa chaperonin 1; ch 97.7 2.7E-05 9.3E-10 60.5 3.5 32 2-33 118-149 (194)
29 1gml_A T-complex protein 1 sub 97.6 3.7E-05 1.3E-09 58.9 3.3 45 7-55 126-174 (178)
30 2f6m_A Suppressor protein STP2 32.4 93 0.0032 19.4 6.2 27 57-83 11-37 (65)
31 1cf7_B Protein (transcription 27.7 52 0.0018 22.2 3.1 22 53-74 53-74 (95)
32 2wh0_Q Pkcev3, protein kinase 24.3 66 0.0023 16.7 2.4 18 52-69 10-27 (31)
No 1
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.2e-39 Score=282.98 Aligned_cols=154 Identities=15% Similarity=0.253 Sum_probs=144.5
Q ss_pred CCCCCCcCCceeeeEEEE-----eecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cc
Q 039968 7 KIPDFDLEHIMSRFWVIV-----SKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-IL 80 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v-----~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vV 80 (165)
+++++++++||+|++|++ ++++|+||++|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 322 ~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~----tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 322 RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAV----TIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceE----EEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 578999999999999988 45899999999887778 999999999999999999999999999999999 99
Q ss_pred cCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc----CCCceeEeecCCce
Q 039968 81 PGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ----ENHDLACDATTERL 154 (165)
Q Consensus 81 pGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~----~~~~~G~d~~~~~~ 154 (165)
||| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++
T Consensus 398 pGG-Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~ 476 (515)
T 3iyg_E 398 YGG-GAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGT 476 (515)
T ss_pred CCC-cHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcc
Confidence 999 99999999999999876 89999999999999999999999999999999 9999873 35679999999999
Q ss_pred e-eccCccccCC
Q 039968 155 V-LKELRISDRA 165 (165)
Q Consensus 155 ~-~~~~gI~dp~ 165 (165)
. |++.|||||+
T Consensus 477 ~d~~~~gI~dp~ 488 (515)
T 3iyg_E 477 NDMKHQHVIETL 488 (515)
T ss_pred cchHhccCEEcH
Confidence 9 9999999995
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.7e-38 Score=281.26 Aligned_cols=163 Identities=34% Similarity=0.518 Sum_probs=147.6
Q ss_pred CCCCCCCCCCCcCCceeeeEEEEeecceEEEeccccce----------e-ecc-----------cc---------eEEEc
Q 039968 2 PTLWCKIPDFDLEHIMSRFWVIVSKNETIVLGRCLSMQ----------E-IEE-----------ER---------SGQVG 50 (165)
Q Consensus 2 ~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~----------~-~~~-----------er---------tI~vr 50 (165)
+++|++++++++++||+|++|++++++|+|+++|...+ . ++. || ||+||
T Consensus 301 ~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lr 380 (543)
T 1we3_A 301 EELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVG 380 (543)
T ss_dssp TTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeC
Confidence 35788999999999999999999999999998776542 1 110 12 79999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhcCcccCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCC
Q 039968 51 GSSKADVRKKKKIVTNALNAAKAAMEEGILPGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGV 129 (165)
Q Consensus 51 G~t~~~l~E~~~~i~Dal~~~~~al~~gvVpGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~ 129 (165)
|+|+++++|+||+++||||++|+++++|+|||| |++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+
T Consensus 381 G~te~~l~E~~r~i~DAl~~~r~av~~giVpGG-Ga~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~ 459 (543)
T 1we3_A 381 AATETELKEKKHRFEDALNATRAAVEEGIVPGG-GVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGY 459 (543)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETT-THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCc-cHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999999999 99999999999999875 8999999999999999999999999999
Q ss_pred ChHH-HHHHHhc-CCCceeEeecCCcee-eccCccccCC
Q 039968 130 AGSF-VGKLLAQ-ENHDLACDATTERLV-LKELRISDRA 165 (165)
Q Consensus 130 d~~~-v~~l~~~-~~~~~G~d~~~~~~~-~~~~gI~dp~ 165 (165)
|+.+ +.+|++. ++.++|||+.+|++. |++.|||||+
T Consensus 460 d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~ 498 (543)
T 1we3_A 460 EGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPA 498 (543)
T ss_dssp CHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEH
T ss_pred CHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccH
Confidence 9999 9999874 457899999999999 9999999994
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.3e-39 Score=287.13 Aligned_cols=161 Identities=28% Similarity=0.418 Sum_probs=146.3
Q ss_pred CCCCCCCCCCCcCCceeeeEEEEeecceEEEeccccceee-----------cc-----------cc---------eEEEc
Q 039968 2 PTLWCKIPDFDLEHIMSRFWVIVSKNETIVLGRCLSMQEI-----------EE-----------ER---------SGQVG 50 (165)
Q Consensus 2 ~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~~-----------~~-----------er---------tI~vr 50 (165)
+++|++++++++++||+|++|++++++|+||.+|...+.+ +. || ||+||
T Consensus 301 ~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vr 380 (546)
T 3rtk_A 301 EEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAG 380 (546)
T ss_dssp SSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECC
T ss_pred ccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeC
Confidence 3678899999999999999999999999999977654321 11 22 69999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhcCcccCCcchHHHHHHHHHHHHhccChhHHHHHHHHHHHHhHHHHHHHHhcCCC
Q 039968 51 GSSKADVRKKKKIVTNALNAAKAAMEEGILPGGGGISLLHASKELDELEITNSSQKIGVQIIQNALKMPVHAIASSAGVA 130 (165)
Q Consensus 51 G~t~~~l~E~~~~i~Dal~~~~~al~~gvVpGG~G~~e~~~~~~L~~~~~~~~~~~~g~~~~~~AL~~~~~~la~NaG~d 130 (165)
|+|+++++|+||+++||||++|+++++|+|||| |++|+++++.|++++ .++++|+|+++|++||+.||++||+|||+|
T Consensus 381 G~te~~l~E~er~l~DAl~a~r~av~~giVpGG-Ga~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d 458 (546)
T 3rtk_A 381 AATEVELKERKHRIEDAVRNAKAAVEEGIVAGG-GVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLE 458 (546)
T ss_dssp CCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETT-THHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCC-cHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999 999999999999887 788999999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCceeEeecCCcee-eccCccccCC
Q 039968 131 GSF-VGKLLAQENHDLACDATTERLV-LKELRISDRA 165 (165)
Q Consensus 131 ~~~-v~~l~~~~~~~~G~d~~~~~~~-~~~~gI~dp~ 165 (165)
+.+ +++|++. ..++|||+.+|++. |++.|||||+
T Consensus 459 ~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~ 494 (546)
T 3rtk_A 459 PGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPV 494 (546)
T ss_dssp HHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEH
T ss_pred HHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecH
Confidence 999 9999886 45699999999999 9999999994
No 4
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-38 Score=281.42 Aligned_cols=153 Identities=19% Similarity=0.306 Sum_probs=143.4
Q ss_pred CCCCCCcCC-ceeeeEE---EEeecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-ccc
Q 039968 7 KIPDFDLEH-IMSRFWV---IVSKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILP 81 (165)
Q Consensus 7 ~l~~~~~~~-LG~a~~v---~v~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVp 81 (165)
+++++++++ ||+|+ | .+.+++++||++|...+.+ ||+|||+|+++++|+||++|||||++|+++++| +||
T Consensus 327 ~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~----TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVp 401 (517)
T 3iyg_Z 327 SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSV----TLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVP 401 (517)
T ss_pred chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhh----eeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEec
Confidence 578899999 99999 9 4567899999999887777 999999999999999999999999999999999 999
Q ss_pred CCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-
Q 039968 82 GGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV- 155 (165)
Q Consensus 82 GG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~- 155 (165)
|| |++|++++++|++++.. ++++|+|+++|++||+.+|++||+|||+|+.+ +.+|++. ++.++|||+.+|++.
T Consensus 402 GG-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d 480 (517)
T 3iyg_Z 402 GA-GAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMV 480 (517)
T ss_pred Cc-cHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccc
Confidence 99 99999999999999876 89999999999999999999999999999999 9999874 456899999999999
Q ss_pred eccCccccCC
Q 039968 156 LKELRISDRA 165 (165)
Q Consensus 156 ~~~~gI~dp~ 165 (165)
|++.|||||+
T Consensus 481 ~~~~gI~dp~ 490 (517)
T 3iyg_Z 481 AAEAGIWDNY 490 (517)
T ss_pred hhhccCeecH
Confidence 9999999995
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.9e-38 Score=282.21 Aligned_cols=154 Identities=18% Similarity=0.260 Sum_probs=144.5
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|++|++. +++|+||.+|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +|||
T Consensus 328 ~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~----TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpG 403 (543)
T 3ruv_A 328 AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAV----TMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSG 403 (543)
T ss_dssp CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSE----EEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEET
T ss_pred ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCcee----EEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecC
Confidence 5788999999999999987 7889999999887778 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc----CCCceeEeecCCcee-
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ----ENHDLACDATTERLV- 155 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~----~~~~~G~d~~~~~~~- 155 (165)
| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++.
T Consensus 404 G-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d 482 (543)
T 3ruv_A 404 G-GSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVED 482 (543)
T ss_dssp T-THHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEE
T ss_pred C-cHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCcccc
Confidence 9 99999999999999876 89999999999999999999999999999999 9999873 346799999999999
Q ss_pred eccCccccCC
Q 039968 156 LKELRISDRA 165 (165)
Q Consensus 156 ~~~~gI~dp~ 165 (165)
|++.|||||+
T Consensus 483 m~~~gI~dp~ 492 (543)
T 3ruv_A 483 MCENGVVEPL 492 (543)
T ss_dssp TTTTTCEEEH
T ss_pred HHHcCCEecH
Confidence 9999999994
No 6
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.9e-38 Score=281.18 Aligned_cols=161 Identities=26% Similarity=0.450 Sum_probs=146.3
Q ss_pred CCCCCCCCCCcCCceeeeEEEEeecceEEEeccccce----------e-ecc-----------cc---------eEEEcC
Q 039968 3 TLWCKIPDFDLEHIMSRFWVIVSKNETIVLGRCLSMQ----------E-IEE-----------ER---------SGQVGG 51 (165)
Q Consensus 3 ~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~----------~-~~~-----------er---------tI~vrG 51 (165)
++|++++++++++||+|++|++++++|+||++|...+ . ++. || ||+|||
T Consensus 303 ~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG 382 (547)
T 1kp8_A 303 EIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGA 382 (547)
T ss_dssp GGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCC
T ss_pred cccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcC
Confidence 5788999999999999999999999999998776542 1 110 22 799999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCcccCCcchHHHHHHHHHHHHhccChhHHHHHHHHHHHHhHHHHHHHHhcCCCh
Q 039968 52 SSKADVRKKKKIVTNALNAAKAAMEEGILPGGGGISLLHASKELDELEITNSSQKIGVQIIQNALKMPVHAIASSAGVAG 131 (165)
Q Consensus 52 ~t~~~l~E~~~~i~Dal~~~~~al~~gvVpGG~G~~e~~~~~~L~~~~~~~~~~~~g~~~~~~AL~~~~~~la~NaG~d~ 131 (165)
+|+++++|+||+++||||++|+++++|+|||| |++|++++..|++++..++++|+|+++|++||+.||++||+|||+|+
T Consensus 383 ~te~~l~E~kr~i~DAl~~~r~av~~giVpGG-Ga~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~ 461 (547)
T 1kp8_A 383 ATEVEMKEKKARVEDALHATRAAVEEGVVAGG-GVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEP 461 (547)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHCEEETT-THHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred CcHhHHHHHHHHHHHHHHHHHHhccCCEEeCC-cHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999 99999999999988656789999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCceeEeecCCcee-eccCccccCC
Q 039968 132 SF-VGKLLAQENHDLACDATTERLV-LKELRISDRA 165 (165)
Q Consensus 132 ~~-v~~l~~~~~~~~G~d~~~~~~~-~~~~gI~dp~ 165 (165)
.+ +++|++. +.++|||+.+|++. |++.|||||+
T Consensus 462 ~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~ 496 (547)
T 1kp8_A 462 SVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPT 496 (547)
T ss_dssp HHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEH
T ss_pred HHHHHHHHhc-CCCEeEeCCCCccccchhcCceech
Confidence 99 9999876 57899999999999 9999999994
No 7
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.2e-38 Score=279.29 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=143.7
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhc-CcccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEE-GILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~-gvVpG 82 (165)
+++++++++||+|+.|++. +++|+||.+|...+.+ ||+|||+|+++++|+||+++||||++|+++++ ++|||
T Consensus 324 ~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~----tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpG 399 (515)
T 3iyg_H 324 SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTC----TIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAG 399 (515)
T ss_pred ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceE----EEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecC
Confidence 5788999999999999976 5899999999887767 99999999999999999999999999999998 59999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 400 G-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm 478 (515)
T 3iyg_H 400 G-GAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADN 478 (515)
T ss_pred C-cHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCccccc
Confidence 9 99999999999998776 89999999999999999999999999999999 9999874 346799999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 479 ~~~gI~dp~ 487 (515)
T 3iyg_H 479 FEAFVWEPA 487 (515)
T ss_pred HhccCEECH
Confidence 999999995
No 8
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.3e-38 Score=283.43 Aligned_cols=162 Identities=34% Similarity=0.521 Sum_probs=138.2
Q ss_pred CCCCCCCCCCcCCceeeeEEEEeecceEEEecccccee-----------ecc-----------cc---------eEEEcC
Q 039968 3 TLWCKIPDFDLEHIMSRFWVIVSKNETIVLGRCLSMQE-----------IEE-----------ER---------SGQVGG 51 (165)
Q Consensus 3 ~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~-----------~~~-----------er---------tI~vrG 51 (165)
++|++++++++++||+|++|++++++|+||++|...++ ++. || ||+|||
T Consensus 304 ~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG 383 (545)
T 1iok_A 304 DLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGG 383 (545)
T ss_dssp ----------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECC
T ss_pred cccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCC
Confidence 57889999999999999999999999999987765421 110 12 799999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCcccCCcchHHHHHHHHHHHHhccChhHHHHHHHHHHHHhHHHHHHHHhcCCCh
Q 039968 52 SSKADVRKKKKIVTNALNAAKAAMEEGILPGGGGISLLHASKELDELEITNSSQKIGVQIIQNALKMPVHAIASSAGVAG 131 (165)
Q Consensus 52 ~t~~~l~E~~~~i~Dal~~~~~al~~gvVpGG~G~~e~~~~~~L~~~~~~~~~~~~g~~~~~~AL~~~~~~la~NaG~d~ 131 (165)
+|+++++|+||+++||||++|+++++|+|||| |++|++++++|++++..++++|+|+++|++||+.||++||+|||+|+
T Consensus 384 ~te~~l~E~kr~i~DAl~~~r~av~~giVpGG-Ga~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~ 462 (545)
T 1iok_A 384 MTEIEVKERKDRVDDALNATRAAVQEGIVVGG-GVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDG 462 (545)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHCEEETT-THHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999 99999999999988656789999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCceeEeecCCcee-eccCccccCC
Q 039968 132 SF-VGKLLAQENHDLACDATTERLV-LKELRISDRA 165 (165)
Q Consensus 132 ~~-v~~l~~~~~~~~G~d~~~~~~~-~~~~gI~dp~ 165 (165)
.+ +.+|++.++.++|||+.+|++. |++.|||||+
T Consensus 463 ~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~ 498 (545)
T 1iok_A 463 AVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPA 498 (545)
T ss_dssp HHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEH
T ss_pred HHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEcc
Confidence 99 9999876567899999999999 9999999994
No 9
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.9e-38 Score=281.57 Aligned_cols=154 Identities=18% Similarity=0.232 Sum_probs=144.7
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|++|++. +++|+||.+|...+.+ ||+|||+|+++++|+||++|||||++|+++++| +|||
T Consensus 342 ~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~----TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpG 417 (553)
T 3ko1_A 342 NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSI----SILIRGGLERLVDETERALRDALGTVADVIKDGRAIAG 417 (553)
T ss_dssp CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCE----EEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEET
T ss_pred ccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceE----EEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecC
Confidence 4788999999999999986 7899999999887778 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CC-CceeEeecCCcee-
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---EN-HDLACDATTERLV- 155 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~-~~~G~d~~~~~~~- 155 (165)
| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++ .++|||+.+|++.
T Consensus 418 G-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d 496 (553)
T 3ko1_A 418 G-GAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVD 496 (553)
T ss_dssp T-THHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEE
T ss_pred C-ceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchH
Confidence 9 99999999999998876 89999999999999999999999999999999 9999875 23 5799999999999
Q ss_pred eccCccccCC
Q 039968 156 LKELRISDRA 165 (165)
Q Consensus 156 ~~~~gI~dp~ 165 (165)
|++.|||||+
T Consensus 497 ~~~~gI~dp~ 506 (553)
T 3ko1_A 497 MWQKGVIEPA 506 (553)
T ss_dssp SGGGSCEEET
T ss_pred HHHhCccchh
Confidence 9999999995
No 10
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.4e-38 Score=277.78 Aligned_cols=154 Identities=17% Similarity=0.255 Sum_probs=142.3
Q ss_pred CCCCCCcCCcee-eeEEEEee---cceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhc-Cccc
Q 039968 7 KIPDFDLEHIMS-RFWVIVSK---NETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEE-GILP 81 (165)
Q Consensus 7 ~l~~~~~~~LG~-a~~v~v~~---~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~-gvVp 81 (165)
+++++++++||+ |+.|++.+ ++|+||.+|...+.+ ||+|||+|+++++|+||++|||||++|+++++ ++||
T Consensus 322 ~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~----TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivp 397 (515)
T 3iyg_G 322 RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKAC----TILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVP 397 (515)
T ss_pred cccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeE----EEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence 478899999999 99998764 479999999887778 99999999999999999999999999999966 5999
Q ss_pred CCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc----CCCceeEeecCCcee
Q 039968 82 GGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ----ENHDLACDATTERLV 155 (165)
Q Consensus 82 GG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~----~~~~~G~d~~~~~~~ 155 (165)
|| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++.
T Consensus 398 GG-Ga~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 476 (515)
T 3iyg_G 398 GG-GASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLV 476 (515)
T ss_pred CC-CHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCccc
Confidence 99 99999999999998766 89999999999999999999999999999999 9999874 245799999999999
Q ss_pred -eccCccccCC
Q 039968 156 -LKELRISDRA 165 (165)
Q Consensus 156 -~~~~gI~dp~ 165 (165)
|++.|||||+
T Consensus 477 d~~~~gi~dp~ 487 (515)
T 3iyg_G 477 DMKELGIWEPL 487 (515)
T ss_pred ccHHcCCEEcH
Confidence 9999999994
No 11
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.2e-37 Score=274.69 Aligned_cols=154 Identities=19% Similarity=0.256 Sum_probs=144.7
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|++|++. +++|+||.+|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +|||
T Consensus 286 ~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpG 361 (500)
T 3aq1_B 286 DLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAV----TVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVG 361 (500)
T ss_dssp CTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTCCCE----EEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEET
T ss_pred ccccCCHhHCCCceEEEEEEecCeEEEEEECCCCCceE----EEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 6789999999999999987 7899999998877767 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 362 G-Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~ 440 (500)
T 3aq1_B 362 G-GSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDM 440 (500)
T ss_dssp T-THHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEET
T ss_pred C-cHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccch
Confidence 9 99999999999999875 88999999999999999999999999999999 9999863 346899999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 441 ~~~gI~dp~ 449 (500)
T 3aq1_B 441 WENDVIEPL 449 (500)
T ss_dssp TTTTCEEEH
T ss_pred HhcCCCCCH
Confidence 999999994
No 12
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3e-38 Score=281.95 Aligned_cols=154 Identities=15% Similarity=0.219 Sum_probs=144.4
Q ss_pred CCCCCCcCCceeeeEEEE-----eecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cc
Q 039968 7 KIPDFDLEHIMSRFWVIV-----SKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-IL 80 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v-----~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vV 80 (165)
+++++++++||+|++|++ ++++|+||.+|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 365 ~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~----TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iV 440 (562)
T 3p9d_E 365 RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTV----TCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVV 440 (562)
T ss_dssp SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCC----EEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEE
T ss_pred ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeE----EEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 578999999999999998 36899999999887777 999999999999999999999999999999999 99
Q ss_pred cCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc----CCCceeEeecCCce
Q 039968 81 PGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ----ENHDLACDATTERL 154 (165)
Q Consensus 81 pGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~----~~~~~G~d~~~~~~ 154 (165)
||| |++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++
T Consensus 441 pGG-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~ 519 (562)
T 3p9d_E 441 YGG-GAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGS 519 (562)
T ss_dssp ETT-THHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBC
T ss_pred CCC-cHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcc
Confidence 999 99999999999999776 89999999999999999999999999999999 9999873 45789999999999
Q ss_pred e-eccCccccCC
Q 039968 155 V-LKELRISDRA 165 (165)
Q Consensus 155 ~-~~~~gI~dp~ 165 (165)
. |++.|||||+
T Consensus 520 ~dm~~~gI~dp~ 531 (562)
T 3p9d_E 520 NDMKELFVVDPF 531 (562)
T ss_dssp CBTTTTTCEEEH
T ss_pred cchHhccCEEcH
Confidence 9 9999999994
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.6e-38 Score=276.67 Aligned_cols=154 Identities=16% Similarity=0.231 Sum_probs=142.0
Q ss_pred CCCCCCcCCceeeeEEEEee----cceEEEecccc-ceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cc
Q 039968 7 KIPDFDLEHIMSRFWVIVSK----NETIVLGRCLS-MQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-IL 80 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~~----~~~~~i~~~~~-~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vV 80 (165)
+++++++++||+|++|++.+ +++++|++|+. .+.+ ||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 326 ~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~----tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iV 401 (518)
T 3iyg_D 326 HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTV----TIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALI 401 (518)
T ss_pred ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceE----EEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEe
Confidence 47889999999999998753 46678988876 5557 999999999999999999999999999999999 99
Q ss_pred cCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee
Q 039968 81 PGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV 155 (165)
Q Consensus 81 pGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~ 155 (165)
||| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++.
T Consensus 402 pGG-Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~ 480 (518)
T 3iyg_D 402 AGG-GAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGIS 480 (518)
T ss_pred ecC-cHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCccc
Confidence 999 99999999999999776 89999999999999999999999999999999 9999873 456799999999999
Q ss_pred -eccCccccCC
Q 039968 156 -LKELRISDRA 165 (165)
Q Consensus 156 -~~~~gI~dp~ 165 (165)
|++.|||||+
T Consensus 481 d~~~~gI~dp~ 491 (518)
T 3iyg_D 481 NILEELVVQPL 491 (518)
T ss_pred chhhccCEEcH
Confidence 9999999994
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.8e-38 Score=277.90 Aligned_cols=152 Identities=17% Similarity=0.206 Sum_probs=141.5
Q ss_pred CCCCcCCceeeeEEE---EeecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCc
Q 039968 9 PDFDLEHIMSRFWVI---VSKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPGGG 84 (165)
Q Consensus 9 ~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpGG~ 84 (165)
+++++++||+|+.|+ +.+++|+||.+|...+.+ ||+|||+|+++++|+||++|||||++|+++++| +||||
T Consensus 332 e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGG- 406 (529)
T 3iyg_A 332 ETFEASMLGQAEEVVQERICDDELILIKNTKARTSA----SVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGG- 406 (529)
T ss_pred hccChhhCccceEEEEEEeCCceEEEEEcCCCCceE----EEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCC-
Confidence 557789999999998 567899999999887767 999999999999999999999999999999999 99999
Q ss_pred chHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CC--------CceeEeecC
Q 039968 85 GISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---EN--------HDLACDATT 151 (165)
Q Consensus 85 G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~--------~~~G~d~~~ 151 (165)
|++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++ .++|||+.+
T Consensus 407 Ga~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~ 486 (529)
T 3iyg_A 407 GAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVN 486 (529)
T ss_pred cHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCC
Confidence 99999999999999876 89999999999999999999999999999999 9999874 22 579999999
Q ss_pred Ccee-eccCccccCC
Q 039968 152 ERLV-LKELRISDRA 165 (165)
Q Consensus 152 ~~~~-~~~~gI~dp~ 165 (165)
|++. |++.|||||+
T Consensus 487 g~~~d~~~~gV~dp~ 501 (529)
T 3iyg_A 487 GKPRDNKQAGVFEPT 501 (529)
T ss_pred CCccChhhccCEecH
Confidence 9999 9999999995
No 15
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=7.7e-38 Score=276.69 Aligned_cols=154 Identities=16% Similarity=0.198 Sum_probs=143.4
Q ss_pred CCCCCCcCCceeeeEEE---EeecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhc-CcccC
Q 039968 7 KIPDFDLEHIMSRFWVI---VSKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEE-GILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~-gvVpG 82 (165)
+++++++++||+|++|+ +.++++++|.+|+..+.+ ||+|||+|+++++|+||+++||||++|+++++ ++|||
T Consensus 321 ~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpG 396 (513)
T 3iyg_B 321 TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEAC----TIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYG 396 (513)
T ss_pred ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceE----EEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeC
Confidence 57889999999999998 457889999998876667 99999999999999999999999999999998 69999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 397 G-Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~ 475 (513)
T 3iyg_B 397 G-GCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDM 475 (513)
T ss_pred C-cHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccch
Confidence 9 99999999999999876 89999999999999999999999999999999 9999874 456899999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 476 ~~~gI~dp~ 484 (513)
T 3iyg_B 476 SVLGITESF 484 (513)
T ss_pred HhccCEecH
Confidence 999999994
No 16
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.5e-38 Score=279.63 Aligned_cols=156 Identities=19% Similarity=0.214 Sum_probs=143.6
Q ss_pred CCCC-CCCCcCCceeeeEEEE---eecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-c
Q 039968 5 WCKI-PDFDLEHIMSRFWVIV---SKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-I 79 (165)
Q Consensus 5 ~~~l-~~~~~~~LG~a~~v~v---~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-v 79 (165)
++.+ +++++++||+|++|++ ++++|+||.+|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +
T Consensus 343 ~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~i 418 (559)
T 3p9d_A 343 NLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSS----SIILRGANDYSLDEMERSLHDSLSVVKRTLESGNV 418 (559)
T ss_dssp CSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCC----CEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCE
T ss_pred cccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEE----EEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCE
Confidence 4444 8899999999999984 67899999988876667 999999999999999999999999999999999 9
Q ss_pred ccCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCC-----------
Q 039968 80 LPGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENH----------- 143 (165)
Q Consensus 80 VpGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~----------- 143 (165)
|||| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.
T Consensus 419 VpGG-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~ 497 (559)
T 3p9d_A 419 VPGG-GCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSY 497 (559)
T ss_dssp ECTT-TTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCC
T ss_pred EeCc-cHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccc
Confidence 9999 99999999999999876 89999999999999999999999999999999 9999874 233
Q ss_pred -ceeEeecCCcee-eccCccccCC
Q 039968 144 -DLACDATTERLV-LKELRISDRA 165 (165)
Q Consensus 144 -~~G~d~~~~~~~-~~~~gI~dp~ 165 (165)
++|||+.+|++. |++.|||||+
T Consensus 498 ~~~G~d~~~g~~~dm~~~gI~dp~ 521 (559)
T 3p9d_A 498 RNYGLDLIRGKIVDEIHAGVLEPT 521 (559)
T ss_dssp CCEEECTTSSSEEESTTSSCCEEH
T ss_pred cceeEECCCCcEeehhhccCEecH
Confidence 699999999999 9999999994
No 17
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-37 Score=274.76 Aligned_cols=154 Identities=19% Similarity=0.243 Sum_probs=141.1
Q ss_pred CCCCCCcCCceeeeEEEEee---cceEEEecccc-ceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-ccc
Q 039968 7 KIPDFDLEHIMSRFWVIVSK---NETIVLGRCLS-MQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILP 81 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~~---~~~~~i~~~~~-~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVp 81 (165)
+++++++++||+|++|++.+ ++++++.+|+. .+.+ ||+|||+|+++++|+||+++||||++|+++++| +||
T Consensus 319 ~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~----tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVp 394 (512)
T 3iyg_Q 319 RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAIS----TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVP 394 (512)
T ss_pred ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceE----EEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEec
Confidence 57889999999999999864 47788888864 3446 899999999999999999999999999999999 999
Q ss_pred CCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCC--ce
Q 039968 82 GGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTE--RL 154 (165)
Q Consensus 82 GG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~--~~ 154 (165)
|| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.++ ++
T Consensus 395 GG-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~ 473 (512)
T 3iyg_Q 395 GG-GATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAV 473 (512)
T ss_pred CC-cHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcc
Confidence 99 99999999999999876 89999999999999999999999999999999 9999874 567899999965 99
Q ss_pred e-eccCccccCC
Q 039968 155 V-LKELRISDRA 165 (165)
Q Consensus 155 ~-~~~~gI~dp~ 165 (165)
. |++.|||||+
T Consensus 474 ~d~~~~gI~dp~ 485 (512)
T 3iyg_Q 474 KDMLEAGVLDTY 485 (512)
T ss_pred cchHhccCeEcH
Confidence 9 9999999995
No 18
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.4e-38 Score=281.73 Aligned_cols=154 Identities=15% Similarity=0.180 Sum_probs=142.9
Q ss_pred CCCCCCcCCceeeeEEE---EeecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVI---VSKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|+.|+ +.+++|+||.+|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +|||
T Consensus 339 ~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~----tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpG 414 (546)
T 3p9d_F 339 SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSC----TILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPG 414 (546)
T ss_dssp CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCE----EEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEET
T ss_pred chhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceE----EEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeC
Confidence 57899999999999994 568899999999887778 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHH---Hhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc--------CCCceeEee
Q 039968 83 GGGISLLHASKELDE---LEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ--------ENHDLACDA 149 (165)
Q Consensus 83 G~G~~e~~~~~~L~~---~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~--------~~~~~G~d~ 149 (165)
| |++|++++.+|++ +... ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+
T Consensus 415 G-Ga~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~ 493 (546)
T 3p9d_F 415 A-GAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDL 493 (546)
T ss_dssp T-THHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBT
T ss_pred C-CHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeC
Confidence 9 9999999999999 4555 89999999999999999999999999999999 9999863 446799999
Q ss_pred cCCcee-eccCccccCC
Q 039968 150 TTERLV-LKELRISDRA 165 (165)
Q Consensus 150 ~~~~~~-~~~~gI~dp~ 165 (165)
.+|++. |++.|||||+
T Consensus 494 ~~g~~~d~~~~gI~dp~ 510 (546)
T 3p9d_F 494 NIGDSCDPTIEGIWDSY 510 (546)
T ss_dssp TTTBCCCSGGGTCEEEH
T ss_pred CCCeecchHhccCEecH
Confidence 999999 9999999994
No 19
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=4.8e-37 Score=273.17 Aligned_cols=154 Identities=18% Similarity=0.237 Sum_probs=144.2
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|+.|++. +++|+||++|...+.+ ||+|||+|+++++|+||+++||||++|+++++| +|||
T Consensus 333 ~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpG 408 (543)
T 1a6d_B 333 TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAV----SILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAG 408 (543)
T ss_dssp CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCE----EEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEET
T ss_pred ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceE----EEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 5788999999999999986 7899999998877667 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 409 G-Ga~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~ 487 (543)
T 1a6d_B 409 G-GATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDM 487 (543)
T ss_dssp T-THHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEET
T ss_pred c-cHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccch
Confidence 9 99999999999999865 88999999999999999999999999999999 9999864 446899999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 488 ~~~gI~dp~ 496 (543)
T 1a6d_B 488 VKNGVIEPI 496 (543)
T ss_dssp TTTTCEEEH
T ss_pred hhcCceecH
Confidence 999999994
No 20
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.1e-37 Score=273.91 Aligned_cols=154 Identities=18% Similarity=0.302 Sum_probs=144.2
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|+.|++. +++|+||.+|...+.+ ||+|||+|+++++|+||++|||||++|+++++| +|||
T Consensus 335 ~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpG 410 (548)
T 1q3q_A 335 NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAV----TILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPA 410 (548)
T ss_dssp SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSE----EEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEC
T ss_pred ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeE----EEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 5788999999999999986 7899999998876667 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 411 G-Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~ 489 (548)
T 1q3q_A 411 G-GAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADM 489 (548)
T ss_dssp T-THHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEET
T ss_pred C-cHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccch
Confidence 9 99999999999999875 89999999999999999999999999999999 9999864 346799999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 490 ~~~gI~dp~ 498 (548)
T 1q3q_A 490 LEKGIIEPL 498 (548)
T ss_dssp TTTTCEEEH
T ss_pred hhcCCEecH
Confidence 999999994
No 21
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.3e-37 Score=279.05 Aligned_cols=158 Identities=18% Similarity=0.223 Sum_probs=137.7
Q ss_pred CCCCCCcCCcee-eeEEEE---eecceEEEecccccee------------------------------ecc---------
Q 039968 7 KIPDFDLEHIMS-RFWVIV---SKNETIVLGRCLSMQE------------------------------IEE--------- 43 (165)
Q Consensus 7 ~l~~~~~~~LG~-a~~v~v---~~~~~~~i~~~~~~~~------------------------------~~~--------- 43 (165)
+++++++++||+ |++|++ ++++|+||.+|...+. +++
T Consensus 339 ~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~ 418 (590)
T 3p9d_C 339 RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGS 418 (590)
T ss_dssp CSTTCCTTSCBCCCSEEECCEETTEECEEECC------------------------------------------------
T ss_pred cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccC
Confidence 578999999999 999974 5789999987765443 000
Q ss_pred ---c----------ceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhc-CcccCCcchHHHHHHHHHHHHhcc-ChhHHHH
Q 039968 44 ---E----------RSGQVGGSSKADVRKKKKIVTNALNAAKAAMEE-GILPGGGGISLLHASKELDELEIT-NSSQKIG 108 (165)
Q Consensus 44 ---e----------rtI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~-gvVpGG~G~~e~~~~~~L~~~~~~-~~~~~~g 108 (165)
+ .||+|||+|+++++|+||+++||||++|+++++ ++|||| |++|++++..|+++... ++++|+|
T Consensus 419 ~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGG-Ga~e~~~s~~L~~~~~~~~g~eq~~ 497 (590)
T 3p9d_C 419 GHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGG-GATEMAVSVKLAEKAKQLEGIQQWP 497 (590)
T ss_dssp ---------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTT-THHHHHHHHHHHHHHHHSCSTTHHH
T ss_pred CHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCc-cHHHHHHHHHHHHHhhcCChHHHHH
Confidence 0 179999999999999999999999999999999 599999 99999999999998765 8999999
Q ss_pred HHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-eccCccccCC
Q 039968 109 VQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-LKELRISDRA 165 (165)
Q Consensus 109 ~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~~~~gI~dp~ 165 (165)
+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |+++|||||+
T Consensus 498 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~ 559 (590)
T 3p9d_C 498 YQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPE 559 (590)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcH
Confidence 9999999999999999999999999 9999874 567899999999999 9999999994
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.8e-38 Score=279.37 Aligned_cols=154 Identities=16% Similarity=0.206 Sum_probs=143.6
Q ss_pred CCCCCCcCCceeeeEEEE---eecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIV---SKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v---~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|+.|++ .+++++++.+|+..+.+ ||+|||+|+++++|+||+++||||++|+++++| +|||
T Consensus 328 ~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpG 403 (527)
T 3p9d_B 328 TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEAC----TIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLG 403 (527)
T ss_dssp TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCE----ECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEET
T ss_pred chhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEE----EEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 578899999999999984 57899999988876667 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 404 G-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm 482 (527)
T 3p9d_B 404 G-GCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADM 482 (527)
T ss_dssp T-THHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCH
T ss_pred C-cHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcch
Confidence 9 99999999999998775 89999999999999999999999999999999 9999874 456899999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 483 ~~~gI~dp~ 491 (527)
T 3p9d_B 483 RQLGIVESY 491 (527)
T ss_dssp HHHTCEEET
T ss_pred HhccCEEcH
Confidence 999999995
No 23
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.9e-37 Score=273.28 Aligned_cols=154 Identities=16% Similarity=0.221 Sum_probs=144.1
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|+.|++. +++|+||++|...+.+ ||+|||+|+++++|+||++|||||++|+++++| +|||
T Consensus 332 ~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~----TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpG 407 (545)
T 1a6d_A 332 DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAV----SILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWG 407 (545)
T ss_dssp SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCE----EEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEET
T ss_pred ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceE----EEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeC
Confidence 5788999999999999986 5899999998876667 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 408 G-Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~ 486 (545)
T 1a6d_A 408 G-GAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDM 486 (545)
T ss_dssp T-THHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEH
T ss_pred c-CHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccc
Confidence 9 99999999999999875 89999999999999999999999999999999 9999863 346899999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
++.|||||+
T Consensus 487 ~~~gI~dp~ 495 (545)
T 1a6d_A 487 KAKGVVDPL 495 (545)
T ss_dssp HHHTCEEEH
T ss_pred hhcCccccH
Confidence 999999994
No 24
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.6e-37 Score=276.65 Aligned_cols=154 Identities=17% Similarity=0.188 Sum_probs=143.7
Q ss_pred CCCCCCcCCceeeeEEEE---eecceEEEeccccceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccC
Q 039968 7 KIPDFDLEHIMSRFWVIV---SKNETIVLGRCLSMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-ILPG 82 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v---~~~~~~~i~~~~~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-vVpG 82 (165)
+++++++++||+|+.|++ .++++++|.+|+..+.+ ||+|||+|+++++|+||+++||||++|+++++| +|||
T Consensus 337 ~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~----tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpG 412 (550)
T 3p9d_G 337 TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTC----TLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAG 412 (550)
T ss_dssp SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCC----CCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEET
T ss_pred chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCcee----EEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccC
Confidence 578899999999999987 46789999998876667 999999999999999999999999999999999 9999
Q ss_pred CcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCcee-e
Q 039968 83 GGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERLV-L 156 (165)
Q Consensus 83 G~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~~-~ 156 (165)
| |++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++. |
T Consensus 413 G-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm 491 (550)
T 3p9d_G 413 G-GATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDN 491 (550)
T ss_dssp T-THHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCH
T ss_pred C-CHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccch
Confidence 9 99999999999998766 89999999999999999999999999999999 9999874 456899999999999 9
Q ss_pred ccCccccCC
Q 039968 157 KELRISDRA 165 (165)
Q Consensus 157 ~~~gI~dp~ 165 (165)
+++|||||+
T Consensus 492 ~~~gI~dp~ 500 (550)
T 3p9d_G 492 FAKFVWEPA 500 (550)
T ss_dssp HHHTCEEEH
T ss_pred HhccCEecH
Confidence 999999994
No 25
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.4e-37 Score=272.11 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=140.0
Q ss_pred CCCCCCcCCceeeeEEEEe---ecceEEEeccc--c-ceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHhcC-c
Q 039968 7 KIPDFDLEHIMSRFWVIVS---KNETIVLGRCL--S-MQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAMEEG-I 79 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~--~-~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~~g-v 79 (165)
+++++++++||+|++|++. +++++++.+|+ . .+.+ ||+|||+|+++++|+||+++||||++|+++++| +
T Consensus 335 ~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~----tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~i 410 (528)
T 3p9d_D 335 DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTV----SVVIRGANNMIIDETERSLHDALCVIRCLVKERGL 410 (528)
T ss_dssp CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCC----EEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCE
T ss_pred ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceE----EEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4688999999999999875 34667777776 3 4446 899999999999999999999999999999999 9
Q ss_pred ccCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc---CCCceeEeecCCce
Q 039968 80 LPGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ---ENHDLACDATTERL 154 (165)
Q Consensus 80 VpGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~---~~~~~G~d~~~~~~ 154 (165)
|||| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++
T Consensus 411 VpGG-Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~ 489 (528)
T 3p9d_D 411 IAGG-GAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGT 489 (528)
T ss_dssp EETT-THHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSC
T ss_pred cCCC-CHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCc
Confidence 9999 99999999999998776 89999999999999999999999999999999 9999874 45679999999999
Q ss_pred e-eccCccccCC
Q 039968 155 V-LKELRISDRA 165 (165)
Q Consensus 155 ~-~~~~gI~dp~ 165 (165)
. |++.|||||+
T Consensus 490 ~dm~~~gI~dp~ 501 (528)
T 3p9d_D 490 TNTYEEHILQPV 501 (528)
T ss_dssp CCHHHHCCEEEH
T ss_pred cchHhccCeecH
Confidence 9 9999999994
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=4.1e-37 Score=274.88 Aligned_cols=154 Identities=14% Similarity=0.183 Sum_probs=140.7
Q ss_pred CCCCCCcCCceeeeEEEEee---cceEEEeccc--cceeecccceEEEcCCcHHHHHHHHHHHHHHHHHHHHHHh--c-C
Q 039968 7 KIPDFDLEHIMSRFWVIVSK---NETIVLGRCL--SMQEIEEERSGQVGGSSKADVRKKKKIVTNALNAAKAAME--E-G 78 (165)
Q Consensus 7 ~l~~~~~~~LG~a~~v~v~~---~~~~~i~~~~--~~~~~~~ertI~vrG~t~~~l~E~~~~i~Dal~~~~~al~--~-g 78 (165)
+++++++++||+|+.|++.+ ++++||.+|. ..+.+ ||+|||+|+++++|+||+++||||++|++++ + +
T Consensus 343 ~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~----TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~ 418 (568)
T 3p9d_H 343 RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTS----TIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGK 418 (568)
T ss_dssp SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSC----EEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCC
T ss_pred ccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeE----EEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence 47889999999999998765 7889998887 34446 9999999999999999999999999999999 5 5
Q ss_pred cccCCcchHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHHHHhcCCChHH-HHHHHhc-----------CCCce
Q 039968 79 ILPGGGGISLLHASKELDELEIT-NSSQKIGVQIIQNALKMPVHAIASSAGVAGSF-VGKLLAQ-----------ENHDL 145 (165)
Q Consensus 79 vVpGG~G~~e~~~~~~L~~~~~~-~~~~~~g~~~~~~AL~~~~~~la~NaG~d~~~-v~~l~~~-----------~~~~~ 145 (165)
+|||| |++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++
T Consensus 419 iVpGG-Ga~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~ 497 (568)
T 3p9d_H 419 LLPGA-GATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYK 497 (568)
T ss_dssp CCCTT-THHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSS
T ss_pred EEeCC-cHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCce
Confidence 99999 99999999999999776 89999999999999999999999999999999 9999885 23579
Q ss_pred eEeecCCc---ee-eccCccccCC
Q 039968 146 ACDATTER---LV-LKELRISDRA 165 (165)
Q Consensus 146 G~d~~~~~---~~-~~~~gI~dp~ 165 (165)
|||+.+|+ +. |++.|||||+
T Consensus 498 G~d~~~g~~~~~~d~~~~gI~dp~ 521 (568)
T 3p9d_H 498 GVDIDGESDEGVKDIREENIYDML 521 (568)
T ss_dssp CCCHHHHTCCCCHHHHHHHHHHHH
T ss_pred eEcccCCCcccccChHHccCEEcH
Confidence 99999997 99 9999999994
No 27
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=97.69 E-value=2.2e-05 Score=61.20 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCcCCceeeeEEEEeecceEEEe
Q 039968 2 PTLWCKIPDFDLEHIMSRFWVIVSKNETIVLG 33 (165)
Q Consensus 2 ~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~ 33 (165)
+|+|++|++++.++||+|++|++++|+|+|+.
T Consensus 125 ee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~ 156 (201)
T 3osx_A 125 EEIGLELEKATLEDLGQAKRVVINKDTTTIID 156 (201)
T ss_dssp GGGTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred cccCCccccCCHhhCCCccEEEEcCCceEEec
Confidence 57899999999999999999999999999886
No 28
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=97.66 E-value=2.7e-05 Score=60.48 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCcCCceeeeEEEEeecceEEEe
Q 039968 2 PTLWCKIPDFDLEHIMSRFWVIVSKNETIVLG 33 (165)
Q Consensus 2 ~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~ 33 (165)
+|+|++|++++.++||+|++|++++|+|+++.
T Consensus 118 ee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~ 149 (194)
T 3m6c_A 118 PDAGMVLREVGLEVLGSARRVVVSKDDTVIVD 149 (194)
T ss_dssp GGGTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred ccCCcccccCCHHHCCCccEEEEcCCceEEec
Confidence 57899999999999999999999999999886
No 29
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=97.58 E-value=3.7e-05 Score=58.89 Aligned_cols=45 Identities=7% Similarity=0.094 Sum_probs=35.8
Q ss_pred CCCCCCcCCcee-eeEEEEe---ecceEEEeccccceeecccceEEEcCCcHH
Q 039968 7 KIPDFDLEHIMS-RFWVIVS---KNETIVLGRCLSMQEIEEERSGQVGGSSKA 55 (165)
Q Consensus 7 ~l~~~~~~~LG~-a~~v~v~---~~~~~~i~~~~~~~~~~~ertI~vrG~t~~ 55 (165)
+++++++++||+ |+.|++. ++++++|.+|+..+.+ ||++||+|-+
T Consensus 126 ~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~~~~~~----TIllRG~~~~ 174 (178)
T 1gml_A 126 RPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKAC----TILLRGASHH 174 (178)
T ss_dssp CGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESSTTSC----EEEEEC----
T ss_pred ChhhCChhhhCCcccEEEEEEECCeEEEEEECCCCCCEE----EEEEECCCcc
Confidence 568899999999 9999864 5689999999887778 9999999864
No 30
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=32.36 E-value=93 Score=19.44 Aligned_cols=27 Identities=15% Similarity=0.310 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCC
Q 039968 57 VRKKKKIVTNALNAAKAAMEEGILPGG 83 (165)
Q Consensus 57 l~E~~~~i~Dal~~~~~al~~gvVpGG 83 (165)
+--.+.+|+|+|...-.|++.|.|+-.
T Consensus 11 l~Aed~AieDaiy~L~~aL~~g~I~l~ 37 (65)
T 2f6m_A 11 LVAQDYALTDTIEALSRMLHRGTIPLD 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 344578999999999999999988544
No 31
>1cf7_B Protein (transcription factor DP-2); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=27.73 E-value=52 Score=22.21 Aligned_cols=22 Identities=32% Similarity=0.309 Sum_probs=17.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH
Q 039968 53 SKADVRKKKKIVTNALNAAKAA 74 (165)
Q Consensus 53 t~~~l~E~~~~i~Dal~~~~~a 74 (165)
+....+-.+|++-|++|++.+.
T Consensus 53 ~~~d~~~~rRRvYD~~NVl~a~ 74 (95)
T 1cf7_B 53 SAYDQKNIRRRVYDALNVLMAM 74 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccccchhhHHHHHHHHHHh
Confidence 3455555999999999998743
No 32
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=24.35 E-value=66 Score=16.69 Aligned_cols=18 Identities=11% Similarity=0.346 Sum_probs=14.2
Q ss_pred CcHHHHHHHHHHHHHHHH
Q 039968 52 SSKADVRKKKKIVTNALN 69 (165)
Q Consensus 52 ~t~~~l~E~~~~i~Dal~ 69 (165)
+-+.+++|.+..|..||.
T Consensus 10 pcdqeikelennirkals 27 (31)
T 2wh0_Q 10 PCDQEIKELENNIRKALS 27 (31)
T ss_pred chHHHHHHHHHHHHHHhc
Confidence 457899999988887763
Done!