Your job contains 1 sequence.
>039972
MEYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG
TKMDTASMLDEAINYVKFLKAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPESL
YSSINNLAAAPVPQQDSMQASETQPFQDFNVFQGEESETLMHLDGFMKY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039972
(169 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 286 5.7e-24 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 234 1.2e-19 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 210 2.4e-19 2
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 231 4.3e-19 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 227 6.5e-19 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 210 4.1e-17 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 210 4.1e-17 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 210 4.1e-17 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 206 6.7e-16 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 198 7.7e-16 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 199 2.2e-15 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 186 1.4e-14 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 192 1.5e-14 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 169 9.1e-13 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 170 1.7e-12 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 167 3.2e-12 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 164 3.2e-12 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 169 3.3e-12 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 167 3.4e-12 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 164 6.9e-12 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 164 7.8e-12 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 161 1.4e-11 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 158 3.8e-11 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 159 4.2e-11 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 153 5.1e-11 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 114 1.6e-10 2
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 143 2.1e-10 2
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 149 3.9e-10 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 149 7.2e-10 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 146 7.4e-10 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 150 9.0e-10 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 140 1.1e-09 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 144 1.2e-09 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 120 3.4e-09 2
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 140 3.9e-09 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 139 4.7e-09 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 135 9.0e-09 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 136 9.3e-09 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 121 1.5e-08 2
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 119 2.8e-08 2
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 131 3.7e-08 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 121 3.8e-08 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 134 4.1e-08 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 128 5.7e-08 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 118 6.7e-08 2
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 126 8.7e-08 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 127 8.7e-08 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 125 1.2e-07 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 127 1.2e-07 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 127 1.8e-07 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 126 2.4e-07 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 122 2.5e-07 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 124 3.1e-07 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 121 3.2e-07 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 111 3.6e-07 2
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 125 3.6e-07 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 123 3.6e-07 1
TAIR|locus:2044762 - symbol:AT2G34820 "AT2G34820" species... 121 4.2e-07 1
TAIR|locus:2204569 - symbol:AT1G30670 "AT1G30670" species... 120 4.3e-07 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 121 5.8e-07 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 114 6.1e-07 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 123 6.4e-07 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 120 7.0e-07 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 114 1.0e-06 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 121 1.1e-06 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 118 1.5e-06 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 120 1.5e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 116 1.6e-06 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 117 1.8e-06 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 117 1.9e-06 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 118 2.3e-06 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 115 2.3e-06 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 111 3.1e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 116 3.1e-06 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 116 3.2e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 115 3.5e-06 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 112 5.2e-06 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 113 5.3e-06 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 117 5.5e-06 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 113 6.1e-06 1
UNIPROTKB|Q7X7U7 - symbol:OSJNBb0091E11.4 "OJ990528_30.9 ... 107 7.1e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 114 7.5e-06 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 110 1.1e-05 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 112 1.1e-05 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 112 1.1e-05 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 111 1.3e-05 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 111 1.6e-05 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 111 3.2e-05 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 108 3.4e-05 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 110 5.0e-05 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 107 0.00011 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 107 0.00013 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 107 0.00015 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 106 0.00016 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 106 0.00024 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 105 0.00028 1
UNIPROTKB|Q75H21 - symbol:OSJNBa0027H16.21 "Putative unch... 106 0.00028 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 107 0.00028 1
ASPGD|ASPL0000062836 - symbol:AN1114 species:162425 "Emer... 106 0.00029 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 107 0.00031 1
WARNING: Descriptions of 10 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 286 (105.7 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 68/140 (48%), Positives = 86/140 (61%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENI 89
LSTDPQSVAAR RRHRISDRFKILQSMVPGG KMDT SMLDEAI+YVKFLKA IW+H+N+
Sbjct: 43 LSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNM 102
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDF 149
+ F + H E + PG+ + P+ L+ ++ A P+ S T +
Sbjct: 103 LLFINDH--ETTSSCTYS--PGAGEFGPK-LFGYDDDYA--PIMDTYSQGVPLTVADSKY 155
Query: 150 NVFQGEESETLMHLDGFMKY 169
+ G + H+ F KY
Sbjct: 156 TPWFGSVDDEQEHVTYF-KY 174
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 54/59 (91%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLK I H+
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISLHQ 109
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 210 (79.0 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 42/56 (75%), Positives = 48/56 (85%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 123 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 178
Score = 35 (17.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 125 NNLAAAPVPQQDSMQASE 142
NN P P QD QAS+
Sbjct: 183 NNTGYTPPPPQD--QASQ 198
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 231 (86.4 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 50/94 (53%), Positives = 67/94 (71%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+STDPQ+VAARQRR RIS++ ++LQ++VPGGTKMDTASMLDEA NY+KFL+A + E
Sbjct: 273 VKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFP-YSPESL 120
N+ D + ++F P SFP + P L
Sbjct: 333 NLRPKLDQTN------LSFSSAPTSFPLFHPSFL 360
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++STDPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK + +
Sbjct: 155 VRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV---Q 211
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFPY 115
++ A + H PP A + Y
Sbjct: 212 SLERAAAANGHRPPPPTATSAAAATVAY 239
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 41/56 (73%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK+ +
Sbjct: 145 VRISKDPQSVAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQV 200
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 123 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 175
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 178
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 206 (77.6 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY++FLK+ I
Sbjct: 368 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 423
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 45/94 (47%), Positives = 57/94 (60%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
++S++PQSVAAR RR R+S R + LQ +VPGG ++DTASML+EAI YVKFLK + E
Sbjct: 119 RVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLER 178
Query: 89 IINFADHHHHEHDPPVAFGQLPGSFPYSPESLYS 122
A H H H F G YS S Y+
Sbjct: 179 AAA-ALHMHGGHAAAAGFAGDAGDAVYSCPSYYA 211
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 199 (75.1 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAAR RR R+SDR ++LQ +VPGG KMDTASMLDEA +Y+KFLK+ +
Sbjct: 279 VRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQV 334
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+V AR+RR RIS++ +IL+ +VPGG KMDTASMLDEAI Y KFLK
Sbjct: 116 VRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLK 168
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 192 (72.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 36/64 (56%), Positives = 53/64 (82%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTA+MLDEA +Y+KFLK+ + E
Sbjct: 301 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 360
Query: 88 NIIN 91
+ N
Sbjct: 361 TLGN 364
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 31/54 (57%), Positives = 46/54 (85%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++DPQS+ AR+RR RI+DR K LQS+VP GTK+D ++ML++A++YVKFL+ I
Sbjct: 138 IASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQI 191
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 170 (64.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQI 280
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 167 (63.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 27 PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
P DPQS+AA+ RR RIS+R KILQ +VP GTK+D +ML++AI+YVKFL+ +
Sbjct: 198 PTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQV 254
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 164 (62.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR +I++R K LQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 174 ATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 226
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 169 (64.5 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 273 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 325
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 167 (63.8 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R K LQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 223 ATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 275
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 164 (62.8 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 27 PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
P + DPQS+AA+ RR RIS+R +ILQ +VP GTK+D +ML++AI+YVKFL+
Sbjct: 200 PTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQ 253
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 164 (62.8 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
DPQS+AA+ RR RIS+R K+LQ +VP GTK+D +ML++AI YVKFL+ +
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQV 260
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 161 (61.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 27 PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
P PQS AA+ RR RIS+R K+LQ +VP GTK+D +ML++AINYVKFL+
Sbjct: 201 PSPNKEQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQ 254
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 158 (60.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 137 ATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 159 (61.0 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 153 (58.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
S D QS+ A++RR RI++R +ILQ +VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 162 SKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQI 214
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 114 (45.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S + + + R+RR RI+++ K LQ ++P TK D SMLDEAI+Y+K L+
Sbjct: 14 SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQ 63
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 111 GSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDFNVFQGEES 157
G P P L ++ + A P Q ++ SE +PFQ + Q +S
Sbjct: 74 GMAPVVPPELQQYMHYITADP-SQIPPIRPSEPRPFQITHATQQRQS 119
Score = 35 (17.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 98 HEHDPPVAFGQLPGSFPYSPE 118
H +PP F + P Y+PE
Sbjct: 133 HPSEPPQNFLRPPKLQLYTPE 153
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 143 (55.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM---DTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K+ D ASMLDE I+YVKFL+
Sbjct: 257 ATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Score = 34 (17.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 96 HHHEHDPPVAFGQLPGSFP 114
HHH+ A + G P
Sbjct: 434 HHHQLSAAAAAAAMRGHLP 452
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 149 (57.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+T QS+ AR+RR RI+ R +ILQ +VP GTK+D ++ML+EA++YVKFL+ I I+
Sbjct: 217 ATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVEVQIV 276
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 149 (57.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 246 ATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 146 (56.5 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I YV+FL+
Sbjct: 106 ATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 150 (57.9 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K + ASMLDE I+YVKFL+
Sbjct: 321 ATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
QS A+ RR RI++R +ILQ ++P GTK+D ++ML+EAI YVKFL
Sbjct: 119 QSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFL 163
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 120 (47.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 183 ATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEF 238
Score = 42 (19.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 111 GSF--PYSPESLYSSINNLAAAPVPQQDSMQASETQPFQD 148
G+F P ++L S N A P PQ S + + QD
Sbjct: 322 GAFREPQMHQTLDGSFRNTAQMPYPQVMSSEELSIRQDQD 361
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 140 (54.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+M+DE ++YVKFL+
Sbjct: 153 ATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 139 (54.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+M+DE ++YVKFL+
Sbjct: 151 ATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 135 (52.6 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K+ AS+LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMK 202
Query: 90 INFADHHHH---EHDPPVAFG 107
+ + H + E PP FG
Sbjct: 203 LEAVNAHVNNGIEAFPPKDFG 223
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 136 (52.9 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ QS AA+ RR RIS+R + LQ +VP G K+D +MLD AI+YVKF++
Sbjct: 198 ETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQ 245
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 121 (47.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 255 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 109 LPGSFPYSPESLYSSINNLAAAPVPQQDSMQ 139
L GSF + Y S+ + + P QD Q
Sbjct: 397 LNGSFSDVSQMAYPSLGSQDLSIRPSQDGFQ 427
Score = 36 (17.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 107 GQLPGS-FPYSPESLYSSINNLAAAPVPQQD-SMQASE 142
G GS P+S +S ++ +A + QD S++ S+
Sbjct: 386 GAKDGSQMPHSLNGSFSDVSQMAYPSLGSQDLSIRPSQ 423
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 119 (46.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 230 ATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 285
Score = 35 (17.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 137 SMQASETQPFQDFNV 151
SM+ S P DFN+
Sbjct: 287 SMKLSAVNPVLDFNL 301
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 131 (51.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 208 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 261
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 121 (47.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 42 RRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 290
Score = 34 (17.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 31 STDPQSVAAR 40
+TDP S+A R
Sbjct: 219 ATDPHSIAER 228
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 134 (52.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE--- 87
+ + +++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+ I
Sbjct: 285 AAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGC 344
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAA-PVPQQDSMQASETQ 144
++ ++ P +A G + + P P S N LAA P+P Q M S Q
Sbjct: 345 GMMPMMYPGMQQYMPHMAMG-MGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQ 401
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 128 (50.1 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K+ AS+LDE INY++ L+ + F
Sbjct: 135 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEF 190
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 118 (46.6 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 267 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 322
Score = 34 (17.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 137 SMQASETQPFQDFNV 151
SM+ + P DFN+
Sbjct: 324 SMKLASVNPTLDFNI 338
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 126 (49.4 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L++ I
Sbjct: 188 ATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 127 (49.8 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R + LQ++VPG K+ A MLDE INYV+ L+ + F
Sbjct: 143 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMK 202
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDF 149
+ ++ + G + S SPE + +S N P S+ + P
Sbjct: 203 LTSISPVVYDFGSDLD-GLILQSEMGSPE-VGTSFTNAMPTTTPIFPSLLDNSVVPTHAQ 260
Query: 150 NVFQGEESETLMHLDGF 166
+GEE E + GF
Sbjct: 261 VQEEGEERENFVDRSGF 277
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 125 (49.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L+ I
Sbjct: 191 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQI 244
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 127 (49.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 211 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHE 87
+ + +++ R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W
Sbjct: 229 AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTT 288
Query: 88 NIINFADHHHHEHDPPVAFGQ----LPGSFPYSPESLYSS---INNLAAAPVPQQDS--M 138
I+ H+ PP+ G +PG+ + + +NN +PQ S M
Sbjct: 289 GIVPMMFPGTHQLMPPMGMGLNTACMPGAQAQGLNQMQRTTYYMNNSLPNQMPQIPSPAM 348
Query: 139 QA-SETQPFQDFNVFQGEESETL 160
A S Q+ N +G + L
Sbjct: 349 NAPSVPDDMQNDNRIRGPRNPFL 371
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 122 (48.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A+MLDE INYV+ L+ + F
Sbjct: 154 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 209
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 124 (48.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + LQ MVPG K M A+MLDE INYV+ L+ + F
Sbjct: 152 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEF 207
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 111 (44.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR +++DR L+S+VP TK+D AS+L +AINYVK L+
Sbjct: 317 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQ 360
Score = 43 (20.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 90 INFADHHHHEH 100
+N + HHHH H
Sbjct: 552 MNQSAHHHHHH 562
Score = 42 (19.8 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 95 HHHHEH 100
HHHH+H
Sbjct: 559 HHHHQH 564
Score = 35 (17.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 91 NFADHHHHE--HDP 102
++ DH HH H P
Sbjct: 534 HYDDHQHHNGHHHP 547
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 125 (49.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 123 (48.4 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K+ A +LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
>TAIR|locus:2044762 [details] [associations]
symbol:AT2G34820 "AT2G34820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004238 HOGENOM:HOG000090323 ProtClustDB:CLSN2914140
EMBL:AY234412 EMBL:AF488588 IPI:IPI00520911 PIR:T00464
RefSeq:NP_181028.2 UniGene:At.37756 ProteinModelPortal:Q84RD0
SMR:Q84RD0 STRING:Q84RD0 EnsemblPlants:AT2G34820.1 GeneID:818047
KEGG:ath:AT2G34820 TAIR:At2g34820 eggNOG:NOG260330
InParanoid:Q84RD0 OMA:EIFNETH PhylomeDB:Q84RD0
Genevestigator:Q84RD0 Uniprot:Q84RD0
Length = 291
Score = 121 (47.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K + QS+AAR RR RI+++ L ++PGG K++TA M A YVKFL++ +
Sbjct: 162 KPTLSSQSIAARGRRRRIAEKTHELGKLIPGGNKLNTAEMFQAAAKYVKFLQSQV 216
>TAIR|locus:2204569 [details] [associations]
symbol:AT1G30670 "AT1G30670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC007060 EMBL:AF488587 IPI:IPI00540602 PIR:B86432
RefSeq:NP_174355.1 UniGene:At.40503 ProteinModelPortal:Q9SA82
SMR:Q9SA82 PRIDE:Q9SA82 EnsemblPlants:AT1G30670.1 GeneID:839947
KEGG:ath:AT1G30670 TAIR:At1g30670 eggNOG:NOG324437
HOGENOM:HOG000090323 InParanoid:Q9SA82 OMA:RRITEKT PhylomeDB:Q9SA82
ProtClustDB:CLSN2914140 Genevestigator:Q9SA82 Uniprot:Q9SA82
Length = 264
Score = 120 (47.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K QS+AAR+RR RI+++ + L ++PG K +TA M + A YVKFL+A I
Sbjct: 133 KRELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQI 187
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 121 (47.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQS+VPG K+ A MLDE I+YV+ L+ + F
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEF 242
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLK 80
+T P+S+A R RR RIS+R + LQ +VP K +TA MLD A++Y+K L+
Sbjct: 76 ATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 126
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 123 (48.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 284 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 339
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 120 (47.3 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 154 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 209
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 114 (45.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 28 MKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K + D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 89 LKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 308 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 363
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 118 (46.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ + +++ ++RR RI+++ K LQS++P K D ASMLDEAI Y+K L+
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 247
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
S + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+ + I+
Sbjct: 344 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV----QIM 399
Query: 91 NFADHHHHEHDPPVAFGQLPGSFP 114
+ A ++ P V F G +P
Sbjct: 400 SMASGYYLP--PAVMFPPGMGHYP 421
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 116 (45.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ + +++ ++RR RI+++ K LQS++P +K D ASMLD+AI Y+K L+
Sbjct: 33 AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQ 82
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 117 (46.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 213 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 268
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R +LQ +VPG ++ A MLDE INYV+ L+ + F
Sbjct: 198 ATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEF 253
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 310 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ + +++ ++RR +I+++ K LQS++P K D ASMLDEAI Y+K L+
Sbjct: 104 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 153
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 111 (44.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 41 QRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+RR RI+ + K LQ +VP +K D ASMLDE I+Y+K L+A +
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQV 54
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIW 84
+ + +++ R+RR RI++R K LQ ++P +K D AS+LDEAI+Y+K L+ V+W
Sbjct: 258 AAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMW 314
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 116 (45.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHE 87
+ + +++ R+RR RI++R K LQ ++P ++ D AS+LDEAI+Y+K L+ V+W
Sbjct: 257 AAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGS 316
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQ 139
+ A P+ F + S PY + S L+ PV + + Q
Sbjct: 317 GMAAAAA----AAASPMMFPGVQSS-PYINQMAMQSQMQLSQFPVMNRSAPQ 363
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 115 (45.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR +I+ R K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 112 (44.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +I+ R K+LQ +VPG K+ TA +LDE IN+V+ L+
Sbjct: 192 ATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQ 242
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 113 (44.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPG-GTKMDTASMLDEAINYVKFLK 80
+T P+S+A R RR +IS+R + LQ +VP T+ +TA MLD A+ Y+K L+
Sbjct: 311 ATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQ 361
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 117 (46.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 635 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 690
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 113 (44.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADHH 96
++ R+RR +I++ K LQ ++P TK D +SMLD+ I YVK L++ I + +
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQI----QMFSMG--- 336
Query: 97 HHEHDPPVAF-GQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDFNVFQGE 155
H PP+ + G + Y P A P P+Q M A P F +
Sbjct: 337 -HVMIPPMMYAGNIQQQ--YMPHMAMGMNRPPAFIPFPRQAHM-AEGVGPVDLFRENEET 392
Query: 156 ESETL 160
E ET+
Sbjct: 393 EQETM 397
>UNIPROTKB|Q7X7U7 [details] [associations]
symbol:OSJNBb0091E11.4 "OJ990528_30.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008210
EMBL:CM000141 EMBL:AL606629 EMBL:AK059273 EMBL:AK101636
EMBL:AL662938 RefSeq:NP_001053182.1 UniGene:Os.55009
EnsemblPlants:LOC_Os04g41570.1 EnsemblPlants:LOC_Os04g41570.2
EnsemblPlants:LOC_Os04g41570.3 GeneID:4336261 KEGG:osa:4336261
eggNOG:NOG241248 OMA:SKGLCLV Uniprot:Q7X7U7
Length = 156
Score = 107 (42.7 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 31 STDPQS--VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
+T P+ V+ ++++ +I +R LQ +V K DTAS+L EA Y+KFL H+
Sbjct: 42 NTSPRDAPVSPKEKKDKIGERVAALQQLVSPFGKTDTASVLQEASGYIKFL------HQQ 95
Query: 89 IINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASET 143
+ + + PPV PG+ P P+ + S+ N VP ++Q +++
Sbjct: 96 LEVLSSPYMRA--PPV-----PGAAPEDPD--HYSLRNRGLCLVPVDQTLQLTQS 141
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 114 (45.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+
Sbjct: 313 TAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQ 362
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A MLD I+YV+ L+ I F
Sbjct: 111 ATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEF 166
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADHH 96
VA R+RR +++++F L+SMVP TKMD S+L + I YV L+ + HE + N HH
Sbjct: 366 VAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRV--HE-LEN--THH 420
Query: 97 HHEH 100
+H
Sbjct: 421 EQQH 424
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADHH 96
+A R+RR +++DR +L+S+VP +KMD AS+L +AI Y+K L I +N + +
Sbjct: 339 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESSPAT 398
Query: 97 HHEHDPPVAFGQLPGSFPYSPESLYSSINNLAA-APVPQQDSMQ 139
P +F L + P P + I A +P QQ ++
Sbjct: 399 SSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVE 442
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 29 KLSTDPQS--VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
KL P +A R+RR R++DR +L+S+VP TKMD S+L +AI+Y+K L
Sbjct: 144 KLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKEL 196
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLK 80
+T P+S+A R RR RIS+R + LQ +VP K +T+ MLD A++Y+K L+
Sbjct: 286 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 336
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 111 (44.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
A RQRR +++ RF L+S+VP +KMD AS+L +AI+Y+K L+ + E+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMED 449
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 108 (43.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKA 81
+T P+S+A R+RR RIS++ + LQ++VP K T+ MLD A++++K L++
Sbjct: 141 ATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQS 192
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 110 (43.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADHH 96
+A R+RR +++DR +L+S+VP +KMD AS+L +AI+Y+K L I N + H+
Sbjct: 310 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI----NDL----HN 361
Query: 97 HHEHDPPVAFGQLPGSF-PYSP--ESLYSSINN-LAAAPVPQQDSMQA 140
E PP + SF P +P ++L + L + +P QA
Sbjct: 362 ELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQA 409
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+A R+RR +++ RF L +++PG KMD AS+L +AI ++K+L+ + +E
Sbjct: 129 LAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYE 179
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR +++ RF L ++VPG KMD AS+L +A+ ++K+L+
Sbjct: 155 IAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQ 198
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++S RF L +VPG KMD AS+L +AI YVK L+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQ 227
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS++ LQ ++PG K+ A +LDE INY++ L+ + F
Sbjct: 160 ATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 106 (42.4 bits), Expect = 0.00024, P = 0.00024
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 29 KLSTDPQS--VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
KL P +A R+RR R++DR +L+S+VP +KMD S+L +AI+Y+K L
Sbjct: 171 KLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKEL 223
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGT-KMDTASMLDEAINYVKFLKAVIWFHE 87
SV ++RR +I++RF+IL+ ++P K DTAS L E I+YV++L+ + +E
Sbjct: 51 SVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYE 103
>UNIPROTKB|Q75H21 [details] [associations]
symbol:OSJNBa0027H16.21 "Putative uncharacterized protein
OSJNBa0027H16.21" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238091 EMBL:AC137921
ProteinModelPortal:Q75H21 Gramene:Q75H21 Uniprot:Q75H21
Length = 384
Score = 106 (42.4 bits), Expect = 0.00028, P = 0.00028
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
P++ +++ R+ + L+ ++PGG +MDT ++LDEA+ Y+K LK +
Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEV 253
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+ D +++ R+RR RI++R K LQ ++P K D SML++ I YVK L+ I
Sbjct: 358 AADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQI 410
>ASPGD|ASPL0000062836 [details] [associations]
symbol:AN1114 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AACD01000016 EMBL:BN001308
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG242942
RefSeq:XP_658718.1 ProteinModelPortal:Q5BEB6
EnsemblFungi:CADANIAT00001514 GeneID:2876891 KEGG:ani:AN1114.2
HOGENOM:HOG000206916 OMA:VNYLEKC Uniprot:Q5BEB6
Length = 393
Score = 106 (42.4 bits), Expect = 0.00029, P = 0.00029
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 36 SVAARQRRHRISDRFKILQSMVPG--GTKMDTASMLDEAINYVKFLKAVIWFHENIINFA 93
S+ R+RR ++++ F L++M+P G +M ++L +I+YV +L+ I +++
Sbjct: 166 SLIERRRRSKMNEEFSTLKNMIPACRGHEMHKLAILQASIDYVNYLEKCI---QDLKAPG 222
Query: 94 DHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPV-PQQDSMQASETQP 145
DH H PP + P S P SPE L + +A V P+ T P
Sbjct: 223 DHEHRPAPPP-SLPSAPLS-PTSPEFLGDPQGSTYSASVSPEVHPESIPSTSP 273
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 107 (42.7 bits), Expect = 0.00031, P = 0.00031
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
A RQRR +++ RF L+++VP +KMD AS+L +AI+Y+ LK+
Sbjct: 420 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKS 463
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 107 (42.7 bits), Expect = 0.00032, P = 0.00032
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
A RQRR +++ RF L+++VP +KMD AS+L +AI+Y+ LK+
Sbjct: 419 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKS 462
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 100 (40.3 bits), Expect = 0.00047, P = 0.00047
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGG-TKMDTASMLDEAINYVKFLKAVIWFHENI 89
S + + + ++RR I D+ ILQ ++P TK D AS L+ I Y+K LK + ++
Sbjct: 68 SMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLK----YQVDV 123
Query: 90 INFADHHHHEHDPPV-AFGQLPGSFP---YSPESLYSSINNLAAAP-VPQ-QDSMQASET 143
++ A + PP A Q P P Y+P N+ P PQ ++ ++T
Sbjct: 124 MSMAYTTTPVYTPPFYAAAQAPCMSPWGYYTPGVPMMPQQNMTYIPQYPQVYGTVPPNQT 183
Query: 144 QP 145
QP
Sbjct: 184 QP 185
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 106 (42.4 bits), Expect = 0.00048, P = 0.00048
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADHHH 97
A R+RR +++ L+S+VP TKMD AS+L +AI+Y+ L+ + E D+H
Sbjct: 289 AERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQV--KELQDELEDNHV 346
Query: 98 HEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQ 135
H H PP P P P SL N+ A+ P Q
Sbjct: 347 H-HKPPDVLIDHP---P--PASLVGLDNDDASPPNSHQ 378
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 97 (39.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 29 KLSTDPQS--VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
K TD ++ R+RR R+ D+ L+S+VP TKMD AS++ +A+ YV+ L++
Sbjct: 124 KTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQS 178
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 134 QQDSMQASETQPFQDFN 150
Q+ + A +TQPF+ N
Sbjct: 201 QEHAPDAQKTQPFRGIN 217
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 30/92 (32%), Positives = 48/92 (52%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIW-FHENI 89
+ + ++A R+RR +I+++ K LQ ++P K S LD+AI YVK L++ I +
Sbjct: 256 TAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPM 315
Query: 90 IN------FADHHHHEHDPPVAFGQLPG-SFP 114
+N F H + + P F PG SFP
Sbjct: 316 MNAGNTQQFMPHMAMDMNRPPPFIPFPGTSFP 347
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 106 (42.4 bits), Expect = 0.00052, P = 0.00052
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
A RQRR +++ RF L+S+VP +KMD AS+L +A++Y+ L A
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHA 480
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 106 (42.4 bits), Expect = 0.00056, P = 0.00056
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A RQRR +++ RF L+++VP +KMD AS+L +AI Y+ LK+ +
Sbjct: 456 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKV 501
>UNIPROTKB|Q75IG3 [details] [associations]
symbol:P0499F10.3 "Putative uncharacterized protein
P0499F10.3" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
ProtClustDB:CLSN2691249 EMBL:AC132487 RefSeq:NP_001054971.2
UniGene:Os.10063 EnsemblPlants:LOC_Os05g14010.1 GeneID:4338155
KEGG:osa:4338155 Uniprot:Q75IG3
Length = 268
Score = 101 (40.6 bits), Expect = 0.00092, P = 0.00092
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIW-FH 86
++ S+ QS + R+ R+ DR L +V K DTAS+L E I Y++FL + I
Sbjct: 113 VQASSSAQSTL-KVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALS 171
Query: 87 ENIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAA-PVPQQDSMQASE 142
+ A+ + PV + PG FP P L + N A P Q + A++
Sbjct: 172 YPYMGDANGTGPMQNGPVG-ERNPGLFPEYPGQLLNHNGNTGAQQPAAQPEQQGAND 227
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 102 (41.0 bits), Expect = 0.00096, P = 0.00096
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR +I+ RF L +++PG KMD A++L +A+ YVK L+
Sbjct: 170 IAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQ 213
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 103 (41.3 bits), Expect = 0.00099, P = 0.00099
Identities = 19/46 (41%), Positives = 35/46 (76%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A +QRR +++ RF L+++VP ++MD AS+L +A++Y++ LK+ I
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKI 298
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 169 153 0.00081 105 3 11 22 0.48 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 110
No. of states in DFA: 572 (61 KB)
Total size of DFA: 142 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.17u 0.24s 17.41t Elapsed: 00:00:01
Total cpu time: 17.18u 0.24s 17.42t Elapsed: 00:00:01
Start: Mon May 20 16:59:14 2013 End: Mon May 20 16:59:15 2013
WARNINGS ISSUED: 1