BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039972
(169 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 85/131 (64%), Gaps = 18/131 (13%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENI 89
LSTDPQSVAAR+RRHRISDRFKILQS+VPGGTKMDT SML+EAI+YVK+LK IW H+ +
Sbjct: 36 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQIWLHQTM 95
Query: 90 INFADHHHHEHDPPVAFGQLPGSFP-YSPESLYSSINNLAAAPVPQQDSMQ--ASETQPF 146
INF D DP + + S P + E+ YS LA MQ + T P
Sbjct: 96 INFVD-----DDPSLLYQS--DSLPSHQQEAFYSPDETLAM--------MQPYITTTAPV 140
Query: 147 QDFNVFQGEES 157
+D FQGEE+
Sbjct: 141 RDSYCFQGEET 151
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 85/131 (64%), Gaps = 9/131 (6%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G K+S G +KLSTDPQSVAAR+RRHRISDRFKILQS+VPGGTKMDT SMLDEAI
Sbjct: 36 GGAGKRSKGV----VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAI 91
Query: 74 NYVKFLKAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYS--PESLYSSINNLAAAP 131
+YVKFLK IW H+ +INF D+ + A FP+ Y+++NNL
Sbjct: 92 HYVKFLKTQIWLHQTMINFVDYDSNSSAAVSAAATANSGFPFEQIASGEYNNMNNLL--- 148
Query: 132 VPQQDSMQASE 142
PQ D ++ E
Sbjct: 149 YPQNDVVKMEE 159
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 95/157 (60%), Gaps = 20/157 (12%)
Query: 13 KGNKKKKSSGSKSNP-MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDE 71
K ++K++ G KSN +KLSTDPQSVAAR+RRHRISDRFKILQS+VPGGTKMDT SML+E
Sbjct: 19 KNGREKRTGGKKSNGGVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEE 78
Query: 72 AINYVKFLKAVIWFHENIINFADHHHH-EHDPPVAFGQLPGSFP-YSPESLYSSINNLAA 129
AINYVKFLK I H+ I+N D ++ P LP P Y +L S ++ ++
Sbjct: 79 AINYVKFLKNQILLHQTIMNSVDDERSLDYHLPAGSASLPTEQPSYLDSNLASVVHPSSS 138
Query: 130 APVPQQDSMQASETQPFQDFNVFQGEESETLMHLDGF 166
P P + FQ +E+ T H D F
Sbjct: 139 LPCPD---------------SYFQADENYT--HYDAF 158
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
S GN K+ S S LSTDPQSVAAR RRHRISDRFKILQSMVPGG KMDT SMLD
Sbjct: 29 SETGNTKRSRSTST-----LSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLD 83
Query: 71 EAINYVKFLKAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPE 118
EAI+YVKFLKA IW+H+N++ F + +H+ + PG+ + P+
Sbjct: 84 EAISYVKFLKAQIWYHQNMLLFIN----DHETTSSCTYSPGAGEFGPK 127
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
S GN K+ S S LSTDPQSVAAR+RRHRIS+RFKILQSMVPGG KMDT SML+
Sbjct: 29 SETGNTKRSRSTST-----LSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLE 83
Query: 71 EAINYVKFLKAVIWFHENIINFADHH 96
EAI YVKFLKA IWFH+N++ F ++H
Sbjct: 84 EAIRYVKFLKAQIWFHQNMLLFLNNH 109
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 73/109 (66%), Gaps = 10/109 (9%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENI 89
LSTDPQSVAAR+RRHRISDRFKILQSM+PGG+K+DT SML+EAI+YVKFLK IW HE +
Sbjct: 32 LSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQIWLHETL 91
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYS----PESLYSSINNLAAAPVPQ 134
INF D H LP + + P + S+ NL P+ Q
Sbjct: 92 INFVDDIGESH------MLLPQDYSSNDKNIPSGTFESMQNLPQLPLEQ 134
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 61/70 (87%)
Query: 25 SNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIW 84
S +KLSTDPQSVAAR+RRHRISDRFKILQS+VPGGTKMDT SML+EAINYVKFLK +
Sbjct: 32 SGGVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQVL 91
Query: 85 FHENIINFAD 94
H+ I+NF D
Sbjct: 92 LHQTIMNFVD 101
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 13 KGNKKKKSSGSKSNP-MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDE 71
+G + + G + P KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++
Sbjct: 43 EGRPMRVAGGGRRRPGTKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQ 102
Query: 72 AINYVKFLKAVIWFHENII 90
AI+YVKFLKA + H+ +
Sbjct: 103 AIHYVKFLKAQVTLHQAAL 121
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 89 II 90
+
Sbjct: 112 AL 113
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 89 II 90
+
Sbjct: 112 AL 113
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
Query: 89 II 90
+
Sbjct: 83 AL 84
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
Query: 89 II 90
+
Sbjct: 83 AL 84
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
Query: 89 II 90
+
Sbjct: 83 AL 84
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
Query: 89 II 90
+
Sbjct: 83 AL 84
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 98
Query: 89 II 90
+
Sbjct: 99 AL 100
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA I H+
Sbjct: 56 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISLHQA 115
Query: 89 II 90
+
Sbjct: 116 AL 117
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 55/59 (93%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQ 81
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 110
Query: 89 II 90
+
Sbjct: 111 AL 112
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++STDPQ+VAARQRR RISDR ++LQ MVPGG+KMDTASMLDEA NY+KFL++ + E
Sbjct: 202 VRISTDPQTVAARQRRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKALE 261
Query: 88 NIINFADHHHHEHDPPVAFGQLP--GSFP 114
N+ + D + +AF LP SFP
Sbjct: 262 NLGHKLDSVNCPQPTNIAFSSLPFNHSFP 290
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 89 II 90
+
Sbjct: 112 AL 113
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMD SML++AI+YVKFLKA + H+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 89 II 90
++
Sbjct: 112 ML 113
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 55/62 (88%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLK I H+
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISLHQA 110
Query: 89 II 90
+
Sbjct: 111 AL 112
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +K+STDPQ+VAARQRR RIS++ ++LQ++VPGGTKMDTASMLDEA NY+KFL+A +
Sbjct: 269 KRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 328
Query: 84 WFHENIINFADHHHHEHDPPVAFGQLPGSFP 114
EN+ D + ++F P SFP
Sbjct: 329 KALENLRPKLDQTN------LSFSSAPTSFP 353
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 56/62 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KM+T SML++AI+YVKFLKA + H+
Sbjct: 47 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQVTLHQA 106
Query: 89 II 90
+
Sbjct: 107 AL 108
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +K+STDPQ+VAARQRR RIS++ ++LQ++VPGGTKMDTASMLDEA NY+KFL+A +
Sbjct: 298 KRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 357
Query: 84 WFHENIINFADHHHHEHDPPVAFGQLPGSFP 114
EN+ D + ++F P SFP
Sbjct: 358 KALENLRPKLDQTN------LSFSSAPTSFP 382
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +K+STDPQ+VAARQRR RIS++ ++LQ++VPGGTKMDTASMLDEA NY KFL+A +
Sbjct: 269 KRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQV 328
Query: 84 WFHENIINFADHHHHEHDPPVAFGQLPGSFP 114
EN+ D + ++F P SFP
Sbjct: 329 KALENLRPKLDQTN------LSFSSAPTSFP 353
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +K+STDPQ+VAARQRR RIS++ ++LQ++VPGGTKMDTASMLDEA NY+KFL+A +
Sbjct: 271 KRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 330
Query: 84 WFHENI 89
EN+
Sbjct: 331 KALENL 336
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI+YVKFLK I
Sbjct: 125 KRKNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQI 184
Query: 84 WFHENIINFADHHHHEHDPPV 104
++ N HH +H PP
Sbjct: 185 RLLQSTPN--SQHHQQHPPPT 203
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 118 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 177
Query: 84 WFHENIINFADHHHHEHDPPV--AFGQLPGS---FPYSPESLYSSINNLAAAPV 132
F ++ PP+ G P S +P++P L+SS PV
Sbjct: 178 RFLQS----------TPPPPINCNVGAAPNSEYYWPFAPNMLHSSTTTFIDMPV 221
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%)
Query: 20 SSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
SS K +++S DPQSVAAR RR RISDR ++LQ +VPGGTKMDTASMLDEAI+YVKFL
Sbjct: 428 SSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFL 487
Query: 80 KAVIWFHENIIN 91
K + E I N
Sbjct: 488 KLQLQTLEQIGN 499
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 51/61 (83%)
Query: 20 SSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
SS K +++S DPQSVAAR RR RISDR ++LQ +VPGGTKMDTASMLDEAI+YVKFL
Sbjct: 22 SSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFL 81
Query: 80 K 80
K
Sbjct: 82 K 82
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S DPQSVAAR RR RISDR ++LQ VPGGTKMDTASMLDEAI+YVKFL+ + E
Sbjct: 386 VRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTLE 445
Query: 88 NIINFAD 94
I N +D
Sbjct: 446 RIGNMSD 452
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQSVAAR RR RIS+R KILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 134 VKISKDPQSVAARHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLK 186
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 137 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 196
Query: 84 WFHENIINFADHHHHEHDPPVAFG 107
++I H PP G
Sbjct: 197 RLLQSI-------SHPSQPPQCIG 213
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 69/113 (61%), Gaps = 19/113 (16%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 109 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQI 168
Query: 84 WFHEN----IINFADHHHHEHDPPVAFGQLPGS--FPYSPESLYSSINNLAAA 130
++ +IN G P S +P++P +SSI N A+
Sbjct: 169 RLLQSTSSPLINCT-------------GAAPNSDYWPFAPNIFHSSITNTNAS 208
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 51/56 (91%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S+DPQ+VAARQRR RISDR ++LQ +VPGG+KMDTASMLDEA NY+KFL++ +
Sbjct: 389 VKISSDPQTVAARQRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQV 444
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+STDPQ+VAAR RR RIS++ ++LQ +VPGG+KMDTASMLDEA NY+KFL++ + E
Sbjct: 336 VKISTDPQTVAARHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 395
Query: 88 NIINFADHHHHEHDPP--VAFGQLPGSFP 114
++ N D + PP +AF P SFP
Sbjct: 396 SLGNKVDAMNC---PPTSIAFSFNP-SFP 420
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGG KMDTASML+EAI YVKFLK I
Sbjct: 104 KRRNVRISDDPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLEEAIRYVKFLKRQI 163
Query: 84 WFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYS 122
+HH +H P G PYS + L S
Sbjct: 164 RL------LQPNHHQQHQPCTTNGDW--QIPYSNKPLDS 194
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 12/105 (11%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I +
Sbjct: 128 VRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 187
Query: 88 NI---------INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSS 123
+I I A HH +A +P++P L SS
Sbjct: 188 SIPQSSNPPQCIGVATTSHHASTLLLAPS---CDWPFAPNVLPSS 229
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 161 VKISKDPQSVAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 216
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 47/52 (90%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++S DPQSVAAR RR RISDR ++LQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 1 RISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLK 52
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQS+AAR RR RIS++ +ILQ MVPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 175 VKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQL 230
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 14 GNKKKKSSGSKSNP----MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
G++ +G++ P +++S+DPQ+VAARQRR RISDR ++LQ +VPGG KMDTASML
Sbjct: 352 GSEDDAGAGAERPPRRRNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASML 411
Query: 70 DEAINYVKFLKAVI 83
DEA +Y++FLK+ +
Sbjct: 412 DEAASYLRFLKSQV 425
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 59/81 (72%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 98 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQI 157
Query: 84 WFHENIINFADHHHHEHDPPV 104
++ N ++++ DPP
Sbjct: 158 RLLQSNTNSNSNNNNNQDPPC 178
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY++FLK+ I
Sbjct: 364 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 419
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY++FLK+ I
Sbjct: 380 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 435
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY++FLK+ I
Sbjct: 368 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 423
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 129 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 188
Query: 84 WFHENI 89
++I
Sbjct: 189 RLLQSI 194
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 149 VKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 204
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY++FLK+ I
Sbjct: 368 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 423
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+STDPQ+VAAR RR RI+++ ++LQ +VPGG+KMDTASMLDEA NY+KFL++ + E
Sbjct: 338 VKISTDPQTVAARHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 397
Query: 88 NIINFADHHHHEHDPP--VAFGQLPGSFP 114
++ N D + PP +AF P SFP
Sbjct: 398 SLGNKVDAMNC---PPTSIAFSFNP-SFP 422
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY++FLK+ +
Sbjct: 351 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQV 406
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 50/61 (81%)
Query: 20 SSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
SS K +++S D QSVAAR RR RISDR ++LQ +VPGGTKMDTASMLDEAI+Y+KFL
Sbjct: 359 SSRPKRRNVRISIDTQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYIKFL 418
Query: 80 K 80
K
Sbjct: 419 K 419
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA +Y++FLKA I
Sbjct: 336 VRISSDPQTVAARQRRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQI 391
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RISDR ++LQ +VPGG KMDTASMLDEA +Y++FLK+ +
Sbjct: 316 VRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQV 371
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 114 KRRNVRISEDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 173
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 48/49 (97%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVK 77
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVK
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 48/56 (85%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQSVAAR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI Y+KFLK +
Sbjct: 157 VRISEDPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQV 212
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 6/74 (8%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK
Sbjct: 25 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK--- 81
Query: 84 WFHENIINFADHHH 97
I +HH
Sbjct: 82 ---RQIRQLQSNHH 92
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 157 VRISEDPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLK 209
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 156 VRISEDPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLK 208
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 88 KRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 147
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+SDR ++LQ +VPGG+KMDTASMLDEA +Y+KFLK+ + E
Sbjct: 279 VRISSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE 338
Query: 88 NI 89
+
Sbjct: 339 TL 340
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 51/60 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S+DPQ+VAAR RR RIS + +ILQ +VPGGTKMDTASMLDEAI+YVK+LK+ +
Sbjct: 283 KRRNVRISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQV 342
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 48/58 (82%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
K +K+S DPQSVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI+YV FLK
Sbjct: 98 KRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVXFLKT 155
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 51/60 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S+DPQ+VAAR RR RIS + +ILQ +VPGGTKMDTASMLDEAI+YVK+LK+ +
Sbjct: 284 KRRNVRISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQV 343
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 51/62 (82%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+SDR ++LQ +VPGG KMDTASMLDEA +Y+KFLK+ + E
Sbjct: 280 VRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLE 339
Query: 88 NI 89
+
Sbjct: 340 TL 341
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 52/62 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTASMLDEA +Y+KFLK+ + E
Sbjct: 289 VRISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE 348
Query: 88 NI 89
+
Sbjct: 349 TL 350
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 51/62 (82%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+SDR ++LQ +VPGG KMDTASMLDEA +Y+KFLK+ + E
Sbjct: 279 VRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLE 338
Query: 88 NI 89
+
Sbjct: 339 TL 340
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 52/62 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTASMLDEA +Y+KFLK+ + E
Sbjct: 290 VRISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE 349
Query: 88 NI 89
+
Sbjct: 350 TL 351
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+SDR ++LQ +VPGG+KMDTASMLDEA +Y+KFL++ + E
Sbjct: 282 VRISSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALE 341
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS + +ILQ +VPGGTKMDTASMLDEA++YVKFLK
Sbjct: 110 VRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLK 162
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSV AR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 157 VRISEDPQSVVARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLK 209
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 48/56 (85%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQS+AAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 113 VRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 9 LASGKGNKKKKSSGSK--SNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTA 66
L G G + SS SK +++S+DPQ+VAAR RR R+S+R ++LQ +VPGG++MDTA
Sbjct: 267 LVCGAGTEPAPSSQSKPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTA 326
Query: 67 SMLDEAINYVKFLKAVI 83
SMLDEA +Y+KFLK +
Sbjct: 327 SMLDEAASYLKFLKTQV 343
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA +Y++FL++ +
Sbjct: 318 VRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQV 373
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS++ +ILQ +VPGG KMDTASMLDEAI YVKFLK I
Sbjct: 34 KRKNVRISDDPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQI 93
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
K +++S DP SVAAR RR RIS++ +ILQ +VPGGTKMDTASMLDEAI YVKFLK
Sbjct: 93 KRRNVRISDDPASVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 149
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 21 SGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S K +++S DPQSVAAR RR RISDR ++LQ VPGGTKMDTASMLDEAI+YVKFL+
Sbjct: 359 SRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQ 418
Query: 81 AVIWFHENIINFAD 94
+ E I N +D
Sbjct: 419 QQLQTLEQIGNMSD 432
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
K +++S+DPQSVAAR RR RISDR ++LQ VPGGTKMDTASMLDEAI+YVKF
Sbjct: 504 KRRNVRISSDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 558
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 51/61 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTA+MLDEA +Y+KFLK+ + E
Sbjct: 229 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 288
Query: 88 N 88
Sbjct: 289 T 289
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG++MDTASMLDEA Y+KFLK+ +
Sbjct: 284 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQV 339
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG++MDTASMLDEA Y+KFLK+ +
Sbjct: 283 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQV 338
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 49/54 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTA+MLDEA +Y+KFLK+
Sbjct: 299 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKS 352
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 49/54 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTA+MLDEA +Y+KFLK+
Sbjct: 301 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKS 354
>gi|255549698|ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
gi|223544805|gb|EEF46320.1| DNA binding protein, putative [Ricinus communis]
Length = 395
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 74/103 (71%), Gaps = 8/103 (7%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++STDPQ+VAARQRR RIS+R ++LQ +VPGG+KMDTASMLDEA NY+KFL++ + E
Sbjct: 288 VRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 347
Query: 88 NIINFADHHHHEHDPP--VAFGQLP-GSFPYSP-ESLYSSINN 126
N+ H + PP +AF LP S P+ P ++ +SS+ N
Sbjct: 348 NL----GHKLEVNSPPTNIAFSSLPFNSHPFHPMQTHFSSLQN 386
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 49/54 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
+++S+DPQ+VAAR RR R+S+R ++LQ +VPGG+KMDTA+MLDEA +Y+KFLK+
Sbjct: 273 VRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKS 326
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 27 PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFH 86
P+ S +PQSVAAR RR +IS+R ++L+ ++PGG KMDTA+MLDEAI YVKFL+ +
Sbjct: 11 PVATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
Query: 87 EN 88
E+
Sbjct: 71 ES 72
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+V AR+RR RIS++ +IL+ MVPGG KMDTASMLDEAI Y KFLK
Sbjct: 98 VRVSEDPQTVVARRRRERISEKIRILKRMVPGGAKMDTASMLDEAIRYTKFLK 150
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQ+V AR+RR RIS++ +IL+ +VPGG KMDTASMLDEAI Y KFLK
Sbjct: 115 VKISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLK 167
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+V AR+RR RIS++ +IL+ MVPGG KMDTASMLDEAI Y KFLK
Sbjct: 101 VRVSDDPQTVVARRRRERISEKIRILKRMVPGGAKMDTASMLDEAIRYTKFLK 153
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 48/54 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
+++S+DPQ+VAAR RR ++S+R + LQ +VPGG+KMDTASMLDEA +Y+KFLK+
Sbjct: 298 VRISSDPQTVAARLRREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKS 351
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 27 PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFH 86
P S +PQSVAAR RR +IS+R ++L+ ++PGG KMDTA+MLDEAI YVKFL+ +
Sbjct: 383 PAATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 442
Query: 87 EN 88
E+
Sbjct: 443 ES 444
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+V AR+RR RIS++ +IL+ +VPGG KMDTASMLDEAI Y KFLK
Sbjct: 116 VRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLK 168
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+V AR+RR RIS++ +IL+ +VPGG KMDTASMLDEAI Y KFLK
Sbjct: 93 VRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLK 145
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 10 ASGKGNKKKKSSGSKSN-----PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
+S +GN K+ +N + DPQS+AARQRR RISDR KILQ ++P G+K+D
Sbjct: 389 SSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD 448
Query: 65 TASMLDEAINYVKFLKAVIWFHENIINFADHHHHEHDPPVA 105
+ML++AINYVKFL+ + N + E D PV+
Sbjct: 449 LVTMLEKAINYVKFLQLQVKVLMNDEYWPPKGDGEEDYPVS 489
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+S +PQ+VAAR+RR +IS++ ++LQ +VPGG+KMD SMLDEA +Y+KFL+A I E
Sbjct: 186 VKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKALE 245
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFPYSP 117
+ + D L +FP +P
Sbjct: 246 GLT----YKFGSIDCLSTCTPLNSTFPTNP 271
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%)
Query: 4 VNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM 63
+N T + KG+ S+G +TDPQS+ AR+RR RI++R +ILQ++VP GTK+
Sbjct: 267 LNGGTTSESKGSAALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV 326
Query: 64 DTASMLDEAINYVKFLKAVI 83
D ++ML+EA++YVKFL+ I
Sbjct: 327 DISTMLEEAVHYVKFLQLQI 346
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S +PQ+VAAR+RR +IS++ ++LQ +VPGG+KMD SMLDEA +Y+KFL+A I
Sbjct: 186 VKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQI 241
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 10 ASGKGNKKKKSSGSKSN-----PMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
+S +GN K+ +N + DPQS+AARQRR RISDR KILQ ++P G+K+D
Sbjct: 389 SSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD 448
Query: 65 TASMLDEAINYVKFLKAVI 83
+ML++AINYVKFL+ +
Sbjct: 449 LVTMLEKAINYVKFLQLQV 467
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 6 AKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDT 65
A + S KG SSG +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D
Sbjct: 246 ASSSLSSKGTATLNSSGKTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDI 305
Query: 66 ASMLDEAINYVKFLKAVI 83
++ML+EA+ YVKFL+ I
Sbjct: 306 STMLEEAVQYVKFLQLQI 323
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine
max]
Length = 110
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 1 MEYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
M+ NAK + K++ KSNP S DPQSVAA+ RR RIS+R KILQ +VP G
Sbjct: 1 MQVTNAKKPCTSAS----KAAKPKSNP---SQDPQSVAAKNRRERISERLKILQELVPNG 53
Query: 61 TKMDTASMLDEAINYVKFLK 80
+K+D +ML++AI+YVKFL+
Sbjct: 54 SKVDLVTMLEKAISYVKFLQ 73
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%)
Query: 4 VNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM 63
+N T + KG+ S+G +TDPQS+ AR+RR RI++R +ILQ++VP GTK+
Sbjct: 73 LNGGTTSESKGSAALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV 132
Query: 64 DTASMLDEAINYVKFLKAVI 83
D ++ML+EA++YVKFL+ I
Sbjct: 133 DISTMLEEAVHYVKFLQLQI 152
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 6 AKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDT 65
A + S KG SSG +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D
Sbjct: 206 ASSSLSSKGTTTLNSSGKTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDI 265
Query: 66 ASMLDEAINYVKFLKAVI 83
++ML+EA+ YVKFL+ I
Sbjct: 266 STMLEEAVQYVKFLQLQI 283
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 43/47 (91%)
Query: 41 QRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA + H+
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQ 47
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+S DPQ+VAARQRR RIS+R ++LQ +VPGGTKMDTASMLDEA NY+KFL+A + E
Sbjct: 294 VKISKDPQTVAARQRRERISERIRVLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKELE 353
Query: 88 NIINFADHHHHEHDPPVAFG 107
NI N D ++ +AF
Sbjct: 354 NIGNKIDTVNNCPPTNIAFS 373
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 42 RRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA I H+ +
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISLHQAAL 50
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 41 QRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLKA I H+
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISLHQ 47
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+S++PQSVAAR RR R+S R + LQ +VPGG ++DTASML+EAI YVKFLK
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLK 170
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 41 QRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+RRHRISDRF++L+S+VPGG+KMDT SML++AI+YVKFLK I H+
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQISLHQ 47
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+S++PQSVAAR RR R+S R + LQ +VPGG ++DTASML+EAI YVKFLK
Sbjct: 121 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLK 171
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
K + +PQS+AARQRR +IS+R + L+ +VPGG K+DTASMLDEAI +VKFL+ + E
Sbjct: 383 KETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEA 442
Query: 89 IIN 91
+ N
Sbjct: 443 VGN 445
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
K + +PQS+AARQRR +IS+R + L+ +VPGG K+DTASMLDEAI +VKFL+ + E
Sbjct: 383 KETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEA 442
Query: 89 IIN 91
+ N
Sbjct: 443 VGN 445
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G K K+ + + P K DPQS+AA+ RR RIS+R +ILQ +VP GTK+D +ML+
Sbjct: 171 CGAGRKAGKAKSAPTTPTK---DPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 227
Query: 71 EAINYVKFLK 80
+AI+YVKFL+
Sbjct: 228 KAISYVKFLQ 237
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G K K+ KS P + DPQS+AA+ RR RIS+R +ILQ +VP GTK+D +ML+
Sbjct: 187 CGAGRKAGKA---KSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 243
Query: 71 EAINYVKFLK 80
+AI+YVKFL+
Sbjct: 244 KAISYVKFLQ 253
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF--HEN 88
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+NYVKFL+ I ++
Sbjct: 271 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDD 330
Query: 89 IINFADHHHHEHDPPVAFGQLP 110
+ +A H+ D + LP
Sbjct: 331 LWMYAPFAHNGLDIGLNLNSLP 352
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G K K+ KS P + DPQS+AA+ RR RIS+R +ILQ +VP GTK+D +ML+
Sbjct: 189 CGAGRKAGKA---KSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 245
Query: 71 EAINYVKFLK 80
+AI+YVKFL+
Sbjct: 246 KAISYVKFLQ 255
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
N+++ +G NK + S GS +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D
Sbjct: 173 NSRSSLNG-ANKSRASRGS-------ATDPQSLYARKRRERINERLRILQTLVPNGTKVD 224
Query: 65 TASMLDEAINYVKFLKAVI 83
++ML+EA+ YVKFL+ I
Sbjct: 225 ISTMLEEAVQYVKFLQLQI 243
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 4 VNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM 63
+N + KG+ S+G +TDPQS+ AR+RR RI++R +ILQ++VP GTK+
Sbjct: 267 LNGGXTSESKGSAALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV 326
Query: 64 DTASMLDEAINYVKFLKAVI 83
D ++ML+EA++YVKFL+ I
Sbjct: 327 DISTMLEEAVHYVKFLQLQI 346
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 7/68 (10%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K + S GS +TDPQS+ AR+RR RI++R ++LQ++VP GTK+D ++ML+EA+NY
Sbjct: 273 KTRASRGS-------ATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNY 325
Query: 76 VKFLKAVI 83
VKFL+ I
Sbjct: 326 VKFLQTQI 333
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G K K+ KS P + DPQS+AA+ RR RIS+R +ILQ +VP GTK+D +ML+
Sbjct: 187 CGAGRKAGKA---KSVPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 243
Query: 71 EAINYVKFLK 80
+AI+YVKFL+
Sbjct: 244 KAISYVKFLQ 253
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 52/65 (80%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
KS+G + + +TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA++YVKF
Sbjct: 216 KSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKF 275
Query: 79 LKAVI 83
L+ I
Sbjct: 276 LQLQI 280
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 52/65 (80%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
KS+G + + +TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA++YVKF
Sbjct: 216 KSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKF 275
Query: 79 LKAVI 83
L+ I
Sbjct: 276 LQLQI 280
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 42 RRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADH 95
RRHRISDRF++L+S+VPGG+KMDT SML++AI+YV+FLKA I + + D
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIRLQQTALMLHDQ 54
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAIN 74
N K K+ S+ + +TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA+
Sbjct: 249 NSKDKARASRGS----ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVE 304
Query: 75 YVKFLKAVI 83
YVKFL+ I
Sbjct: 305 YVKFLQLQI 313
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 7/68 (10%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K + S GS +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+NY
Sbjct: 260 KTRASRGS-------ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNY 312
Query: 76 VKFLKAVI 83
VKFL+ I
Sbjct: 313 VKFLQLQI 320
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAIN 74
N K K+ S+ + +TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA+
Sbjct: 254 NSKDKARASRGS----ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVE 309
Query: 75 YVKFLKAVI 83
YVKFL+ I
Sbjct: 310 YVKFLQLQI 318
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAIN 74
N K K+ S+ + +TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA+
Sbjct: 250 NSKDKARASRGS----ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVE 305
Query: 75 YVKFLKAVI 83
YVKFL+ I
Sbjct: 306 YVKFLQLQI 314
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
A+ G +KS S+ + +TDPQS+ AR+RR RI++R +ILQ +VP GTK+D ++ML
Sbjct: 227 ATSDGGVNRKSRASRGS----ATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML 282
Query: 70 DEAINYVKFLKAVI 83
+EA++YVKFL+ I
Sbjct: 283 EEAVHYVKFLQLQI 296
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 7/80 (8%)
Query: 1 MEYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
M+ NAK + K++ K NP K DPQSVAA+ RR RIS+R KILQ +VP G
Sbjct: 186 MQATNAKKPCTSAS----KAAKPKLNPFK---DPQSVAAKNRRERISERLKILQELVPNG 238
Query: 61 TKMDTASMLDEAINYVKFLK 80
+K+D +ML++AI+YVKFL+
Sbjct: 239 SKVDLVTMLEKAISYVKFLQ 258
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 7/76 (9%)
Query: 8 TLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTAS 67
T +S K + S GS +TDPQS+ AR+RR RI++R +ILQS+VP GTK+D ++
Sbjct: 238 TSSSTSNGKPRASRGS-------ATDPQSLYARKRRERINERLRILQSLVPNGTKVDIST 290
Query: 68 MLDEAINYVKFLKAVI 83
ML+EA+ YVKFL+ I
Sbjct: 291 MLEEAVQYVKFLQLQI 306
>gi|222619489|gb|EEE55621.1| hypothetical protein OsJ_03959 [Oryza sativa Japonica Group]
Length = 166
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 41/41 (100%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
KLSTDPQSVAAR+RRHRISDRF++L+S+VPGG+KMDTA+++
Sbjct: 12 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTAALV 52
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 8 TLASGKG------NKKKKSSGSKSNPM---------KLSTDPQSVAARQRRHRISDRFKI 52
T+A+ KG + S+GS+ +P+ + +TDPQS+ AR+RR RI++R K+
Sbjct: 187 TIAATKGQSMSCCTSENDSNGSQESPVAANPSGKGRQSTTDPQSLYARKRRERINERLKV 246
Query: 53 LQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
LQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 247 LQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 277
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Query: 13 KGNKK--KKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
+GN K K G+++N +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+
Sbjct: 175 EGNAKPSSKKMGTRAN-RGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLE 233
Query: 71 EAINYVKFLKAVI 83
EA+ YVKFL+ I
Sbjct: 234 EAVQYVKFLQLQI 246
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Query: 13 KGNKK--KKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
+GN K K G+++N +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+
Sbjct: 175 EGNAKPSSKKMGTRAN-RGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLE 233
Query: 71 EAINYVKFLKAVI 83
EA+ YVKFL+ I
Sbjct: 234 EAVQYVKFLQLQI 246
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+V A +RR RIS++ +IL+ +VPGG KMD+ASMLDEAI Y KFLK
Sbjct: 93 VRISDDPQTVVAXRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLK 145
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
NA + K ++ SSG +TDPQS+ AR+RR RI++R KILQ +VP GTK+D
Sbjct: 251 NASKDSDSKVSEVLSSSGKTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKVD 310
Query: 65 TASMLDEAINYVKFLKAVIWFHENIINFADH 95
++ML+EA++YVKFL+ I ++NF H
Sbjct: 311 ISTMLEEAVHYVKFLQLQIKVKA-LVNFFLH 340
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 231 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 283
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 7/65 (10%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K K S GS +TDPQS+ AR+RR RI DR +ILQ++VP GTK+D ++ML+EA+ Y
Sbjct: 239 KTKASKGS-------ATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQY 291
Query: 76 VKFLK 80
VKFL+
Sbjct: 292 VKFLQ 296
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ DPQS+AARQRR RIS R KILQ +VP G+K+D +ML++AINYVKF++
Sbjct: 240 ANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQ 289
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 17 KKKSSG----SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
KK SSG +K P DPQS+AA+ RR RIS+R KILQ +VP GTK+D +ML++A
Sbjct: 184 KKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKA 243
Query: 73 INYVKFLKAVI 83
I+YVKFL+ +
Sbjct: 244 ISYVKFLQVQV 254
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQ+ AR+RR RIS++ +IL+ +VPGG KMD+ASMLDEAI Y KFLK
Sbjct: 89 VRISDDPQTGVARRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLK 141
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ DPQS+AARQRR RIS R KILQ +VP G+K+D +ML++AINYVKF++
Sbjct: 240 ANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQ 289
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 6 AKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDT 65
A + S KG+ +G +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D
Sbjct: 189 ASSSLSSKGDAALNLNGKTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVDI 248
Query: 66 ASMLDEAINYVKFLKAVI 83
++ML+EA++YVKFL+ I
Sbjct: 249 STMLEEAVHYVKFLQLQI 266
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ DPQS+AAR RR RISDR KILQ +VP TK+D +ML++AINYVKFL+
Sbjct: 365 ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQ 414
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 15/105 (14%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
NA L S K+ + KSN +++DPQS+ AR+RR RI+DR K LQS+VP GTK+D
Sbjct: 117 NALGLVSNTSKSLKRKA--KSNK-GIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD 173
Query: 65 TASMLDEAINYVKFLKAVI--------WFH----ENIINFADHHH 97
++ML++A++YVKFL+ I W + N +N HH+
Sbjct: 174 ISTMLEDAVHYVKFLQLQIKLLSSDDLWMYALLAHNGLNMGLHHN 218
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 23/118 (19%)
Query: 3 YVNAKTLASGKGNKKKKSSGSKSNPMK-----------LSTDPQSVAARQRRHRISDRFK 51
+ + ++L+S + +K+ G SN K +++DPQS+ AR+RR RI+DR K
Sbjct: 100 WRDGQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLK 159
Query: 52 ILQSMVPGGTKMDTASMLDEAINYVKFLKAVI--------WFH----ENIINFADHHH 97
LQS+VP GTK+D ++ML++A++YVKFL+ I W + N +N HH+
Sbjct: 160 TLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHN 217
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ DPQS+AAR RR RISDR KILQ +VP TK+D +ML++AINYVKFL+
Sbjct: 365 ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQ 414
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Query: 15 NKKKKSSGSKSNPMKLST-----DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
NKK +G K++ KL++ DPQS+AA+ RR RIS+R + LQ +VP GTK+D +ML
Sbjct: 180 NKKHCGAGRKASKAKLASTAPTKDPQSLAAKNRRERISERLRALQELVPNGTKVDLVTML 239
Query: 70 DEAINYVKFLK 80
++AI+YVKFL+
Sbjct: 240 EKAISYVKFLQ 250
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR +I++R KILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 253 ATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 305
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 54/62 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++S+DPQ+VAARQRR RIS+R ++LQ +VPGG+KMDTASMLDEA NY+KFLK+ I E
Sbjct: 284 VRISSDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKALE 343
Query: 88 NI 89
N+
Sbjct: 344 NL 345
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 13 KGNKKKKSSGSKSNPMKLS--TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
K KK+ S+ SK+ K S DPQSVAA+ RR RIS+R KILQ +VP G+K+D +ML+
Sbjct: 226 KAAKKQCSTESKTPKHKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLE 285
Query: 71 EAINYVKFLK 80
+AI+YVKFL+
Sbjct: 286 KAISYVKFLQ 295
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 273 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 325
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G K K+ + P K DPQS+AA+ RR RIS+R + LQ +VP GTK+D +ML+
Sbjct: 197 CGAGRKASKAKSPSTTPTK---DPQSLAAKNRRERISERLRTLQELVPNGTKVDLVTMLE 253
Query: 71 EAINYVKFLK 80
+AI+YVKFL+
Sbjct: 254 KAISYVKFLQ 263
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 270 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 322
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 273 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 325
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 272 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 324
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
STDPQS+ AR+RR RI++R K LQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 222 STDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQLQI 274
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 271 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 323
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++DPQ V A++RR RI++R KILQS+VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 245 ASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQI 297
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 17 KKKSSG----SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
KK +SG +K P DPQS+AA+ RR RIS+R KILQ +VP GTK+D +ML++A
Sbjct: 182 KKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKA 241
Query: 73 INYVKFLKAVI 83
I+YVKFL+ +
Sbjct: 242 ISYVKFLQVQV 252
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 32 TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
TDPQS+ AR+RR RI++R KILQ+++P GTK+D ++ML+EA++YVKFL+ I
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQI 291
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 32 TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
TDPQS+ AR+RR RI++R KILQ+++P GTK+D ++ML+EA++YVKFL+ I
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQI 291
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQS+ ARQRR RI++R + LQ +VP G K+D +ML+EAINYVKFL+
Sbjct: 244 ATDPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQ 293
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 32 TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
TDPQS+ AR+RR RI++R KILQ+++P GTK+D ++ML+EA++YVKFL+ I
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQI 291
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ +VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQI 296
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 244 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 296
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ +VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQI 296
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLST--DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTAS 67
+SG KK+ ++ K K +T DPQS+AA+ RR RIS+R KILQ +VP G+K+D +
Sbjct: 165 SSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVT 224
Query: 68 MLDEAINYVKFLK 80
ML++AI+YVKFL+
Sbjct: 225 MLEKAISYVKFLQ 237
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 10 ASGKGNKK-KKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
A G G+ ++ G +T+PQS+ AR+RR RI++R KILQ++VP GTK+D ++M
Sbjct: 211 ADGDGDADARRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTM 270
Query: 69 LDEAINYVKFLKAVI 83
L+EA++YVKFL+ I
Sbjct: 271 LEEAVHYVKFLQLQI 285
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ +VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 244 ATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 296
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S DPQSVAA+ RR RIS+R KILQ +VP G+K+D +ML++AI+YVKFL+
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 295
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ +VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 244 ATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 296
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 KKKKSSGSKSNPMKLS--TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
KK+ +S +K K S DPQS+AA+ RR RIS+R KILQ +VP G+K+D +ML++AI
Sbjct: 215 KKQCNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 274
Query: 74 NYVKFLK 80
+YVKFL+
Sbjct: 275 SYVKFLQ 281
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 17 KKKSSGSKSNPMKLST----DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
KK SSG+ +T DPQS+AA+ RR RIS+R K+LQ +VP GTK+D +ML++A
Sbjct: 190 KKPSSGTNGEAKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 249
Query: 73 INYVKFLKAVI 83
I YVKFL+ +
Sbjct: 250 IGYVKFLQVQV 260
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+STDPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 139 VKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 194
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
SG N K+ ++ +TDPQS+ AR+RR RI++R KILQ++VP GTK+D ++ML
Sbjct: 262 VSGVLNSNGKTRATRG----AATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTML 317
Query: 70 DEAINYVKFLKAVI 83
+EA++YV FL+ I
Sbjct: 318 EEAVHYVNFLQLQI 331
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R K LQ++VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 223 ATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 275
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 17 KKKSSGS--KSNPMKLST--DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
KK SSG+ K P ++ DPQS+AA+ RR RIS+R K+LQ +VP GTK+D +ML++A
Sbjct: 190 KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 249
Query: 73 INYVKFLKAVI 83
I YVKFL+ +
Sbjct: 250 IGYVKFLQVQV 260
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++STDPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY+KFL++ + E
Sbjct: 366 VRISTDPQTVAARQRRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALE 425
Query: 88 NIINFADHHHHEHDPPVAFGQLP--GSFP 114
+ + D + H + F LP SFP
Sbjct: 426 TLGHKLDSVNCVHT-NLPFSALPFNHSFP 453
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 51/60 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++STDPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 172 KRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 231
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+++STDPQ+VAARQRR RIS+R ++LQ +VPGG KMDTASMLDEA NY+KFL++ + E
Sbjct: 342 VRISTDPQTVAARQRRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALE 401
Query: 88 NIINFADHHHHEHDPPVAFGQLP--GSFP 114
+ + D + H + F LP SFP
Sbjct: 402 TLGHKLDSVNCVHT-NLPFSALPFNHSFP 429
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 49/55 (89%)
Query: 29 KLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++STDPQSVAAR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 164 RISTDPQSVAARVRRERISERIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 218
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 51/60 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++STDPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 151 KRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 210
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 17 KKKSSGS--KSNPMKLST--DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
KK SSG+ K P ++ DPQS+AA+ RR RIS+R K+LQ +VP GTK+D +ML++A
Sbjct: 122 KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 181
Query: 73 INYVKFLKAVI 83
I YVKFL+ +
Sbjct: 182 IGYVKFLQVQV 192
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 43/51 (84%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
DPQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 273 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 323
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 12 GKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDE 71
G N K + ++++ +TDPQS+ AR+RR RI++R +ILQ +VP GTK+D ++ML+E
Sbjct: 179 GNTNSSTKKAYTRAS-RGAATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE 237
Query: 72 AINYVKFLKAVI 83
A YVKFL+ I
Sbjct: 238 AAQYVKFLQLQI 249
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Query: 6 AKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDT 65
T +S K + S G +TDPQS+ AR+RR RI++R +ILQ++VP GTK+D
Sbjct: 185 GNTYSSAKKTCTRASRGG-------ATDPQSLYARKRRERINERLRILQNLVPNGTKVDI 237
Query: 66 ASMLDEAINYVKFLKAVI 83
++ML+EA YVKFL+ I
Sbjct: 238 STMLEEAAQYVKFLQLQI 255
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K + S + S+P +TD QS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+ Y
Sbjct: 191 KLGRKSRAASSP---ATDAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQY 247
Query: 76 VKFLKAVI 83
VKFL+ I
Sbjct: 248 VKFLQLQI 255
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++STDPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 157 VRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 212
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 3 YVNAKTLASGKGNKKKKSSGSKSNPMKL---STDPQSVAARQRRHRISDRFKILQSMVPG 59
+V+ ++L++ ++K + K +TDPQS+ AR+RR +I++R K LQ++VP
Sbjct: 143 WVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPN 202
Query: 60 GTKMDTASMLDEAINYVKFLKAVI 83
GTK+D ++ML+EA++YVKFL+ I
Sbjct: 203 GTKVDISTMLEEAVHYVKFLQLQI 226
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 3 YVNAKTLASGKGNKKKKSSGSKSNPMKL---STDPQSVAARQRRHRISDRFKILQSMVPG 59
+V+ ++L++ ++K + K +TDPQS+ AR+RR +I++R K LQ++VP
Sbjct: 143 WVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPN 202
Query: 60 GTKMDTASMLDEAINYVKFLKAVI 83
GTK+D ++ML+EA++YVKFL+ I
Sbjct: 203 GTKVDISTMLEEAVHYVKFLQLQI 226
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK + E
Sbjct: 141 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLE 200
Query: 88 NI 89
+
Sbjct: 201 QV 202
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAV-IWFHEN 88
LS DPQS+AAR RRH+I RFKILQSMVPGG MDT SMLDEAI YVKFL+ + W
Sbjct: 37 LSMDPQSIAARHRRHKIRKRFKILQSMVPGGKNMDTVSMLDEAIQYVKFLQFMHFWLQSR 96
Query: 89 II 90
I+
Sbjct: 97 IM 98
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 4 VNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM 63
V ++A+ G+ K S + + S D QS+ A++RR RI++R +ILQ +VP GTK+
Sbjct: 147 VGEDSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKV 206
Query: 64 DTASMLDEAINYVKFLKAVI 83
D ++ML+EA+ YVKFL+ I
Sbjct: 207 DISTMLEEAVQYVKFLQLQI 226
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 44/51 (86%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+PQS+ AR+RR RI++R K+LQS+VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQI 272
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 4 VNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM 63
V ++A+ G+ K S + + S D QS+ A++RR RI++R +ILQ +VP GTK+
Sbjct: 135 VGEDSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKV 194
Query: 64 DTASMLDEAINYVKFLKAVI 83
D ++ML+EA+ YVKFL+ I
Sbjct: 195 DISTMLEEAVQYVKFLQLQI 214
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++STDPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 163 VRISTDPQSVAARVRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 218
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 151 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 206
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 12 GKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDE 71
G N K + ++++ +T+PQS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+E
Sbjct: 183 GNTNSSSKKTCARAS-RGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEE 241
Query: 72 AINYVKFLKAVI 83
A YVKFL+ I
Sbjct: 242 AAQYVKFLQLQI 253
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 3 YVNAKTLASGKGNKKKKSSGSKSNPMKL---STDPQSVAARQRRHRISDRFKILQSMVPG 59
+++ ++L++ ++K + K +TDPQS+ AR+RR +I++R K LQ++VP
Sbjct: 143 WIDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPN 202
Query: 60 GTKMDTASMLDEAINYVKFLKAVI 83
GTK+D ++ML+EA++YVKFL+ I
Sbjct: 203 GTKVDISTMLEEAVHYVKFLQLQI 226
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ A+QRR RI+ R + LQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 211 ATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQLQI 263
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 148 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 203
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 143 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 195
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQSV AR RR +I++R K LQ++VP G K+D +MLDEAI+YVKFL+
Sbjct: 3 ATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQ 52
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S KS P K DPQS+AA+ RR RIS+R KILQ +VP G+K+D +ML++AI+YVKF
Sbjct: 245 RKSKPKSIPPK---DPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKF 301
Query: 79 LK 80
L+
Sbjct: 302 LQ 303
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 134 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 186
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE 87
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK + E
Sbjct: 149 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLE 208
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 45/52 (86%)
Query: 32 TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
TDPQS+ AR+RR +I++R K+LQ++VP GTK+D ++ML+EA++Y+KF++ I
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQI 305
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 161 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 216
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQSV AR RR +I++R K LQ++VP G K+D +MLDEAI+YVKFL+ +
Sbjct: 449 ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQV 501
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR RI++R +ILQ +VP GTK+ ++ML+EA+ YVKFL+ I
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQI 296
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIW 84
+TDPQS+AAR RR + +DR +ILQS+VP G ++DT ML + YV+FL+ +W
Sbjct: 682 ATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQHKVW 735
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 8 TLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTAS 67
T ++ K S+G +TDPQS+ AR+RR +I++R + LQ++VP GTK+D ++
Sbjct: 182 TTSASKSTMSLNSNGKARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDIST 241
Query: 68 MLDEAINYVKFLKAVI 83
ML++AI+YVKFL+ I
Sbjct: 242 MLEDAIHYVKFLQLQI 257
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 148 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 207
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 160 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 212
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQSV AR RR RI++R K LQ +VP G K+D +ML+EAI+YVKFL+ +
Sbjct: 218 ATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQV 270
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%), Gaps = 9/71 (12%)
Query: 16 KKKKSSGSK------SNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
KK++ S +K + P K DPQS+AA+ RR RIS+R K+LQ +VP G+K+D +ML
Sbjct: 216 KKQRDSATKKPKPKSAGPAK---DPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVTML 272
Query: 70 DEAINYVKFLK 80
++AI+YVKFL+
Sbjct: 273 EKAISYVKFLQ 283
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 154 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 209
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 148 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 200
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
+TDPQSV AR RR +I++R K LQ++VP G K+D +MLDEAI+YVKFL+
Sbjct: 3 ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQT 53
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 173 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 225
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+K+S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK +
Sbjct: 156 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 211
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 44/51 (86%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+PQS+ AR+RR RI++R K+LQS+VP GTK+D ++ML+EA++YVKFL+ I
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQI 272
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 45/53 (84%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDPQS+ AR+RR +I++R + LQ++VP GTK+D ++ML++AI+YVKFL+ I
Sbjct: 191 ATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQI 243
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQSVAAR RR RIS+R + LQ +VPGGTKMDTASMLDEAI+YVKFLK+ +
Sbjct: 170 VRISKDPQSVAARLRRERISERIRTLQRLVPGGTKMDTASMLDEAIHYVKFLKSQV 225
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQSVAAR RR RIS+R + LQ +VPGGTKMDTASMLDEAI+YVKFLK+ +
Sbjct: 153 VRISKDPQSVAARLRRERISERIRTLQRLVPGGTKMDTASMLDEAIHYVKFLKSQV 208
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++ S DPQSVAAR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI+YVKFLK+ +
Sbjct: 162 VRTSKDPQSVAARLRRERISERIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKSQV 217
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
PQS AA+ RR RIS+R K+LQ +VP GTK+D +ML++AINYVKFL+
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQ 248
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
PQS AA+ RR RIS+R K+LQ +VP GTK+D +ML++AINYVKFL+
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQ 254
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
PQS AA+ RR RIS+R K+LQ +VP GTK+D +ML++AINYVKFL+
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQ 255
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++ S DPQSVAAR RR RIS+R ++LQ +VPGGTKMDTASMLDEAI+YVKFLK+ +
Sbjct: 153 VRTSKDPQSVAARLRRERISERIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKSQV 208
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQSV AR RR +I++R K LQ +VP G K+D +MLDEAI+YV+FL+
Sbjct: 449 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQ 498
>gi|357492173|ref|XP_003616375.1| Transcription factor bHLH83 [Medicago truncatula]
gi|355517710|gb|AES99333.1| Transcription factor bHLH83 [Medicago truncatula]
Length = 325
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 21/94 (22%)
Query: 1 MEYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
M+ NAK + K+K KSNP K DPQSVAA+ RR RIS+R KILQ +VP G
Sbjct: 202 MQPTNAKKPCTAASKKEKH----KSNPSK---DPQSVAAKNRRERISERLKILQELVPNG 254
Query: 61 TK--------------MDTASMLDEAINYVKFLK 80
+K +D +ML++AI+YVKFL+
Sbjct: 255 SKVDFQISPQSYVAFFVDLVTMLEKAISYVKFLQ 288
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQSV AR RR +I++R K LQ +VP G K+D +MLDEAI+YV+FL+
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQ 52
>gi|15242494|ref|NP_196537.1| transcription factor HEC3 [Arabidopsis thaliana]
gi|75311668|sp|Q9LXD8.1|HEC3_ARATH RecName: Full=Transcription factor HEC3; AltName: Full=Basic
helix-loop-helix protein 43; Short=AtbHLH43; Short=bHLH
43; AltName: Full=Protein HECATE 3; AltName:
Full=Transcription factor EN 119; AltName: Full=bHLH
transcription factor bHLH043
gi|7671414|emb|CAB89355.1| putative protein [Arabidopsis thaliana]
gi|9759006|dbj|BAB09533.1| unnamed protein product [Arabidopsis thaliana]
gi|332004059|gb|AED91442.1| transcription factor HEC3 [Arabidopsis thaliana]
Length = 224
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 50/65 (76%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 119 KRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 178
Query: 84 WFHEN 88
N
Sbjct: 179 RLLNN 183
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G +K K+ + + P K DPQSVAA+ RR +I+++ K+LQ +VP GTK+D +ML+
Sbjct: 185 CGGGARKSKAKAAPA-PTK---DPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLE 240
Query: 71 EAINYVKFLK 80
+AI YVKFL+
Sbjct: 241 KAITYVKFLQ 250
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 122 KRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 178
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+ DPQS+AAR RR RIS+R K+LQ+++P G K+D +ML++AI YV+ L+ I +N
Sbjct: 55 ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLKNDS 114
Query: 91 NFADHHHHEHDPPVAFGQLPGSF 113
+ P A G LP +
Sbjct: 115 IW----------PKALGPLPNTL 127
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 112 KRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 168
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
PQS AA+ RR RIS+R K+LQ +VP GTK+D +ML++AINYVKFL+
Sbjct: 224 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQ 270
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 122 KRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 178
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 119 KRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 175
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 49/60 (81%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI YVKFLK I
Sbjct: 112 KRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 171
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
>gi|115479527|ref|NP_001063357.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|51535231|dbj|BAD38280.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|51536285|dbj|BAD38453.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|113631590|dbj|BAF25271.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|125563981|gb|EAZ09361.1| hypothetical protein OsI_31634 [Oryza sativa Indica Group]
gi|215697773|dbj|BAG91966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765762|dbj|BAG87459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 50/56 (89%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK+ +
Sbjct: 145 VRISKDPQSVAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQV 200
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
K +++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI+YVKFLK
Sbjct: 119 KRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 175
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIW 84
+TDPQS+AAR RR + +DR +ILQ +VP G ++DT ML + YV+FL+ +W
Sbjct: 681 ATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYVRFLQHKVW 734
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+TDPQSV AR RR +I++R K LQ +VP G ++D +ML+EAI++VKFL+ F ++
Sbjct: 477 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLE----FQLELL 532
Query: 91 NFADHHHHEHDPPVAFG-QLPGSFPYSPESL 120
+D DP + G + GS+P+ P L
Sbjct: 533 R-SDDRWMFADPFIYNGMDITGSYPHVPSGL 562
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 182 VRISEDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLK 234
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S DPQSVAAR RR RIS+R + LQ +VPGGTKMDTASMLDEAI YVKFLK+ +
Sbjct: 158 KRRNVRVSKDPQSVAARLRRERISERIRALQRLVPGGTKMDTASMLDEAIQYVKFLKSQL 217
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+ ++
Sbjct: 39 ATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQ----LQVKVL 94
Query: 91 NFADHHHHEHDPPVAFGQLP--GSFPYSPESLYSSINNLAAAPVPQQDSMQASETQ 144
+ + P + LP G+ ++ + S I P P QD + +E Q
Sbjct: 95 SMSRLGGAGALPSLVNNDLPSEGANTFAASAGSSGI------PNPAQDGLALTERQ 144
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 44/53 (83%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+T+ QS+ AR+RR RI++R +ILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 217 ATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQI 269
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 194 ATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 243
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 180 VRISEDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLK 232
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 137 ATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 137 ATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
K S S P + S D QS+ A++RR RI+++ + LQ ++P GTK+D ++ML+EA+ YVKF
Sbjct: 162 KQSTSSRGPSRSSKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKF 221
Query: 79 LKAVI 83
L+ I
Sbjct: 222 LQLQI 226
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YVKFL+
Sbjct: 135 ATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 184
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 197 VRISEDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLK 249
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
DPQS A+ RR RIS+R K+LQ +VP GTK+D +ML++AI YVKFL+
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQ 218
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
+ DPQS+AAR RR RIS+R K+LQ+++P G K+D +ML++AI YV+ L+ I +N
Sbjct: 761 ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLKN 818
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
G G + K + P + DPQSVAA+ RR +I+++ K+LQ +VP GTK+D +ML
Sbjct: 215 CGGVGARMKSKQAKLAAPAP-TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTML 273
Query: 70 DEAINYVKFLK 80
++AI YVKFL+
Sbjct: 274 EKAITYVKFLQ 284
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 327 ATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQ 376
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 158 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLK 210
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 158 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLK 210
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP G K D ASMLDE I+YV+FL+
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQ 194
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++S DPQSVAAR RR RIS+R +ILQ +VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 161 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLK 213
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK S + P K D QS+AA+ RR RIS+R K+LQ +VP G+K+D +ML++AI+YV
Sbjct: 227 KKPKPKSAAGPAK---DLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYV 283
Query: 77 KFLK 80
KFL+
Sbjct: 284 KFLQ 287
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 324 ATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 373
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 327 ATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 376
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 289 ATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 338
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
DPQS+AAR RR RIS+R K+LQ+++P G K+D +ML++AI+YV+ L+ I +N
Sbjct: 648 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKMLKN 703
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 327 ATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 376
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 260 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 309
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+ +
Sbjct: 203 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQV 255
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+ +
Sbjct: 206 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQV 258
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 44 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 93
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 232 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 281
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 211 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 260
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 204 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 253
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 263 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 312
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 246 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 295
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 224 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 273
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 8 TLASGKGNKKKKSSGSKSNPMKLS---------TDPQSVAARQRRHRISDRFKILQSMVP 58
T ASG G SSG + P + + TDP S+A R RR RI++R K LQ +VP
Sbjct: 159 TAASG-GTAAPASSGGGAAPPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVP 217
Query: 59 GGTKMDTASMLDEAINYVKFLK 80
K D ASMLDE I+YVKFL+
Sbjct: 218 NANKTDKASMLDEIIDYVKFLQ 239
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 111 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 160
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQSV AR RR +I++R + LQ ++P G K+D +MLDEA++YV+FLK
Sbjct: 454 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLK 503
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+ DPQS+AAR RR RIS+R K+LQ+++P G K+D +ML++AI+YV+ L+ I +N
Sbjct: 829 ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKMLKNDS 888
Query: 91 NFADHHHHEHDPPVAFGQLPGSF 113
+ P A G LP +
Sbjct: 889 LW----------PKALGPLPNTL 901
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 166 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 215
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQSV AR RR +I++R + LQ ++P G K+D +MLDEA++YV+FLK
Sbjct: 3 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLK 52
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 254 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 303
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+ +
Sbjct: 151 ATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQV 203
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 38 ATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQ 87
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 171 ATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQ 220
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I YVKFL+
Sbjct: 37 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQ 86
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 266 ATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQ 315
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 266 ATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQ 315
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 195 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 244
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
A+G G K + + +TDP S+A R RR +ISDR K LQ +VP + D ASML
Sbjct: 288 AAGNGAPKPRVRARRGQ----ATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASML 343
Query: 70 DEAINYVKFLK 80
DE I YVKFL+
Sbjct: 344 DEIIEYVKFLQ 354
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 257 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 306
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 202 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 251
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RIS+R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 149 ATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 198
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RIS+R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 148 ATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 197
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
A+G G K + + +TDP S+A R RR +ISDR K LQ +VP + D ASML
Sbjct: 288 AAGNGAPKPRVRARRGQ----ATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASML 343
Query: 70 DEAINYVKFLK 80
DE I YVKFL+
Sbjct: 344 DEIIEYVKFLQ 354
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ +G KS K D QS A++RR RI++R +ILQ ++P GTK+D ++ML+EA+ YVKF
Sbjct: 93 RKNGKKSRAAK---DSQSHYAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKF 149
Query: 79 L 79
L
Sbjct: 150 L 150
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE ++YVKFL+
Sbjct: 247 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQ 296
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE ++YVKFL+
Sbjct: 246 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQ 295
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella
moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella
moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella
moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella
moellendorffii]
Length = 143
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE ++YVKFL+
Sbjct: 11 ATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQ 60
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 322 ATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 371
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 211 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQ 260
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 211 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQ 260
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 176 ATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLR 225
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 106 ATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLR 155
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +I++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 143 ATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 192
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDPQSV AR RR +I++R K LQ +VP G ++D +ML+EAI++VKFL+
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLE 52
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 323 ATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
>gi|449480726|ref|XP_004155978.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH87-like
[Cucumis sativus]
Length = 383
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 24 KSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
K +++S+DPQ+VAARQRR RIS+R ++LQ +VPGG+KMDTASMLDEA K LK+ I
Sbjct: 280 KRKNVRISSDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAAXLSKVLKSQI 339
Query: 84 WFHENI 89
EN+
Sbjct: 340 KALENL 345
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 323 ATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 32 TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQ 269
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 323 ATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASMLDE I++VKFL+
Sbjct: 327 ATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQ 376
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 65 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 114
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 246 ATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 11 SGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
SG GN +++ + +TDP S+A R RR +IS+R K LQ +VP K D +SMLD
Sbjct: 308 SGNGNSASAKPRARARRGQ-ATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLD 366
Query: 71 EAINYVKFLK 80
E I+YVKFL+
Sbjct: 367 EIIDYVKFLQ 376
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YV+FL+
Sbjct: 201 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQ 250
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 158 ATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLR 207
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D +SMLDE I+YVKFL+
Sbjct: 326 ATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 375
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +I++R K LQ +VP +K+D ASMLDE I YVKFL+
Sbjct: 358 ATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQ 407
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 164 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 213
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 13/66 (19%)
Query: 31 STDPQSVAAR-------------QRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVK 77
+TDPQS+ AR +RR RI++R +ILQ +VP GTK+D ++ML+EA+ YVK
Sbjct: 244 ATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVK 303
Query: 78 FLKAVI 83
FL+ I
Sbjct: 304 FLQLQI 309
>gi|225444197|ref|XP_002270265.1| PREDICTED: transcription factor bHLH52-like [Vitis vinifera]
Length = 283
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 7 KTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTA 66
+T + G +SSG K LS QS+AARQRR +I+++ + L ++PGG KM+TA
Sbjct: 135 QTAPAFYGCGSVESSGKKGCRESLSA--QSIAARQRRRKITEKTQELGKLIPGGNKMNTA 192
Query: 67 SMLDEAINYVKFLKAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINN 126
M A YVK+L+A VA QL GS Y+ E+ Y
Sbjct: 193 EMFQAAFKYVKYLQAQ---------------------VAILQLMGSLQYNEEAFYVEELQ 231
Query: 127 LAAAPVPQQ 135
A+P+ Q+
Sbjct: 232 ATASPMIQE 240
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K + ASMLDE I+YVKFL+
Sbjct: 321 ATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K + ASMLDE I+YVKFL+
Sbjct: 321 ATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +I++R K LQ +VP K+D ASMLDE I YVKFL+
Sbjct: 247 ATDPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQ 296
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 17 KKKSSGSKSNPMKLSTDP-QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
+ K S SK+ +S + QS A+ RR RI++R +ILQ ++P GTK+D ++ML+EAI Y
Sbjct: 100 RTKMSVSKACKHSVSAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQY 159
Query: 76 VKFL 79
VKFL
Sbjct: 160 VKFL 163
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 182 ATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLR 231
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +IS+R K LQ +VP K D +SMLDE I+YVKFL+
Sbjct: 328 ATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQ 377
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
D QS+ A++RR RI++R + LQ ++P GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 160 DLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQI 210
>gi|255586237|ref|XP_002533773.1| DNA binding protein, putative [Ricinus communis]
gi|223526310|gb|EEF28618.1| DNA binding protein, putative [Ricinus communis]
Length = 288
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L+S + + S K N LS QS+AAR+RR +I++R + L ++PGG KM+TA M
Sbjct: 142 LSSFSVGRSESSCVKKPNGGSLSA--QSIAARERRRKITERTQELGKLIPGGNKMNTAEM 199
Query: 69 LDEAINYVKFLKAVIWFHE 87
L A NYVKFL+A + E
Sbjct: 200 LQSASNYVKFLQAQVGILE 218
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I YV+FL+
Sbjct: 106 ATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I YV+FL+
Sbjct: 106 ATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
N+ +SG K + S + QS+ A++RR RI+++ ++LQ ++P GTK+D ++ML+EA+
Sbjct: 157 ANQSDNTSGCK----RPSKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAV 212
Query: 74 NYVKFLKAVI 83
YVKFL+ I
Sbjct: 213 QYVKFLQLQI 222
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+M+DE ++YVKFL+
Sbjct: 170 ATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLR 219
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 173 ATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLR 222
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 176 ATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLR 225
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 23 ATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 72
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 27 ATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 76
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +I++R K LQ +VP K D ASMLDE I YVKFL+
Sbjct: 303 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RIS+R K LQ +VP K D A+++DE ++YVKFL+
Sbjct: 141 ATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLR 190
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +ISDR K LQ +VP K D ASML+E I Y+KFL+
Sbjct: 289 ATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQ 338
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR +I++R K LQ +VP K D ASMLDE I YVKFL+
Sbjct: 156 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 205
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+T P S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 267 ATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 316
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 123 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 172
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 122 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 171
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 193
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 31 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 80
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 133 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 182
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 188 ATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 237
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 131 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 180
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 139 ATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
>gi|125596454|gb|EAZ36234.1| hypothetical protein OsJ_20554 [Oryza sativa Japonica Group]
Length = 189
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
+S++PQSVAAR RR R+S R + LQ +VPGG ++DTASML+EA
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEA 162
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +V K D ASMLDE I+YVKFL+
Sbjct: 152 ATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQ 201
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A+MLDE ++YVKFL+
Sbjct: 187 ATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLR 236
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM---DTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K+ D ASMLDE I+YVKFL+
Sbjct: 257 ATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
>gi|358347412|ref|XP_003637751.1| LAX [Medicago truncatula]
gi|355503686|gb|AES84889.1| LAX [Medicago truncatula]
Length = 298
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
QS+AAR+RR +I+++ + L +VPGG KM+TA ML+ A NYVKFL+A +
Sbjct: 168 QSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAAANYVKFLQAQV 216
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +V K D ASMLDE I+YVKFL+
Sbjct: 124 ATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQ 173
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 17 KKKSSGSKSNPMKLSTDP-QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
+ K S SK+ +S + Q A+ RR RI++R +ILQ ++P GTK+D ++ML+EAI Y
Sbjct: 100 RTKMSVSKACKHSVSAESSQPYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQY 159
Query: 76 VKFL 79
VKFL
Sbjct: 160 VKFL 163
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R + LQ +VP K D A MLDE ++YVKFL+
Sbjct: 129 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLR 178
>gi|357128639|ref|XP_003565978.1| PREDICTED: uncharacterized protein LOC100831424 [Brachypodium
distachyon]
Length = 299
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 33 DPQSVAARQRRHRISDRFKILQSMVPGG--TKMDTASMLDEAINYVKFLKA 81
+PQ+VAAR RR ++S+R + L+ +VPGG KMDTASML +A Y+ FLKA
Sbjct: 181 EPQTVAARLRREKVSERLRALRRLVPGGGSGKMDTASMLHQAACYLSFLKA 231
>gi|296089224|emb|CBI38996.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 7 KTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTA 66
+T + G +SSG K LS QS+AARQRR +I+++ + L ++PGG KM+TA
Sbjct: 116 QTAPAFYGCGSVESSGKKGCRESLSA--QSIAARQRRRKITEKTQELGKLIPGGNKMNTA 173
Query: 67 SMLDEAINYVKFLKAVI 83
M A YVK+L+A +
Sbjct: 174 EMFQAAFKYVKYLQAQV 190
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM------DTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K+ D ASMLDE I+YVKFL+
Sbjct: 292 ATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQ 347
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK---MDTASMLDEAINYVKFLK 80
+TDP S+A R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 245 ATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
P+S ARQRR ++SD+ + LQ ++P KMD A+ML+EA YVKFL+A
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQA 227
>gi|224117892|ref|XP_002317694.1| predicted protein [Populus trichocarpa]
gi|222860759|gb|EEE98306.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 8 TLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTAS 67
T G+ ++ +S S + LST QS+AAR+RR +I+++ + L +PGG KM+TA
Sbjct: 148 TFNVGRTDQSVMNSKKPSTGVSLST--QSIAARERRRKITEKTRELGKFIPGGHKMNTAE 205
Query: 68 MLDEAINYVKFLKAVIWFHE 87
M A YVKFL+A I E
Sbjct: 206 MFQAASKYVKFLQAQIGILE 225
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
QS AA+ RR RIS+R + LQ +VP G K+D +MLD AI+YVKF++
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQ 245
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
QS AA+ RR RIS+R + LQ +VP G K+D +MLD AI+YVKF++
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQ 245
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG TK+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESL--YSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE++ S + +L + P+ QQ S+ S
Sbjct: 208 LSVLNPELEFHINELSTKQFQAYFADLPEAVSKQSVMADLQSFPLHQQGSLDYS 261
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K KKS+ ++ + +TDPQSV AR+RR RI++R KILQ++VP GTK+D ++ML+EA+ Y
Sbjct: 256 KGKKSTANRGS----ATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQY 311
Query: 76 VKFLKAVI 83
VKFL+ I
Sbjct: 312 VKFLQLQI 319
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 41 QRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+RR RI++R +ILQ++VP GTK+D ++ML+EA+ YVKFL+ I
Sbjct: 86 RRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQI 128
>gi|346682821|gb|AEO45564.1| abscisic acid-responsive protein bHLH2 [Populus koreana]
Length = 297
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAIN 74
+ KK S+G +S QS+AAR+RR +I+++ + L ++PGG KM+TA M A
Sbjct: 158 DSKKPSTG-------VSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASK 210
Query: 75 YVKFLKAVIWFHE 87
YVKFL+A I E
Sbjct: 211 YVKFLQAQIGILE 223
>gi|224061589|ref|XP_002300555.1| predicted protein [Populus trichocarpa]
gi|222847813|gb|EEE85360.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAIN 74
+ KK S+G +S QS+AAR+RR +I+++ + L ++PGG KM+TA M A
Sbjct: 159 DSKKPSTG-------VSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASK 211
Query: 75 YVKFLKAVIWFHE 87
YVKFL+A I E
Sbjct: 212 YVKFLQAQIGILE 224
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K+ A MLDE INYV+FL+ + F
Sbjct: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHE-- 87
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 66 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMK 125
Query: 88 -NIINFADHHHHEHDPPVAFG 107
+N + E PP FG
Sbjct: 126 LEAVNSRTNSGIEGFPPKDFG 146
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMK 202
Query: 90 INFADHHHH---EHDPPVAFG 107
+ + H + E PP FG
Sbjct: 203 LEAVNAHVNNGIEAFPPKDFG 223
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 141 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMK 200
Query: 90 INFADHHHH---EHDPPVAFG 107
+ + H + E PP FG
Sbjct: 201 LEAVNAHVNNGIEAFPPKDFG 221
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMK 202
Query: 90 INFADHHHH---EHDPPVAFG 107
+ + H + E PP FG
Sbjct: 203 LEAVNAHVNNGIEAFPPKDFG 223
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 102 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMK 161
Query: 90 INFADHHHH---EHDPPVAFG 107
+ + H + E PP FG
Sbjct: 162 LEAVNAHVNNGIEAFPPKDFG 182
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA MLDEA+ YVKFL+ I
Sbjct: 124 FATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQI 178
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA++YVKFL+ I
Sbjct: 194 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQI 248
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQS+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 160 ATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
>gi|449435928|ref|XP_004135746.1| PREDICTED: uncharacterized protein LOC101220022 [Cucumis sativus]
gi|449515945|ref|XP_004165008.1| PREDICTED: uncharacterized protein LOC101226994 [Cucumis sativus]
Length = 308
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
Q++AAR+RR +I+ + + L +VPGG+KM+TA ML+ A YVKFL+A +
Sbjct: 189 QTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQV 237
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA MLDEA+ YVKFL+ I
Sbjct: 176 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQI 230
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA MLDEA+ YVKFL+ I
Sbjct: 87 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQI 141
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R K+LQS+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 88 ATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEF 143
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 23/121 (19%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWFHENI 89
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 312 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMK 371
Query: 90 INFADHH--------------HHEHDPPVAFG---QLPGSFP-----YSPESLYSSINNL 127
+ + H H+ P A G ++P +FP Y P ++S++ N+
Sbjct: 372 LATVNPHVDFNMERLLPKDILQHQPGPSSALGFLREMPMAFPPLSHSYQPGLIHSTLPNM 431
Query: 128 A 128
A
Sbjct: 432 A 432
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L S NK K SGS + + +++ R+RR RI+++ + LQ ++P K D ASM
Sbjct: 15 LDSAVANKPAKRSGSTRR--SRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASM 72
Query: 69 LDEAINYVKFLK---AVIWFHENII 90
LDEAI Y+K L+ V+W I+
Sbjct: 73 LDEAIEYLKSLQLQLQVMWMGSGIV 97
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNP----------MKLSTDPQSVAARQRRHRISDRFKILQ 54
N+K G+ +KK+K GSK P +TD S+A R RR +IS+R + LQ
Sbjct: 108 NSKEGVEGRKSKKQKR-GSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQ 166
Query: 55 SMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
++VPG K+ A MLDE INYV+ L+ + F
Sbjct: 167 NLVPGCDKVTGKALMLDEIINYVQTLQTQVEF 198
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R K+LQS+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 118 ATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEF 173
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R K+LQS+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 254 ATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEF 309
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 133 ATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEF 188
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 131 ATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEF 186
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R K LQ +VPG +K M AS LDE INYV+ L+ + F
Sbjct: 139 ATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEF 194
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
EY +++ + + KK++ GS S + + +++ R+RR RI+++ + LQ ++P
Sbjct: 332 EYYHSEDVEFESADAKKQARGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN 391
Query: 62 KMDTASMLDEAINYVKFLK 80
K D ASMLDEAI Y+K L+
Sbjct: 392 KSDKASMLDEAIEYLKSLQ 410
>gi|242038015|ref|XP_002466402.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
gi|241920256|gb|EER93400.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
Length = 292
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 4 VNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM 63
VN ++ A G K+ +K + +TDPQS+ AR+RR RI++R KILQ +VP GTK+
Sbjct: 187 VNRRSGAHGGSGGNAKAQAAKGS----ATDPQSLYARRRRERINERLKILQKLVPNGTKV 242
Query: 64 DTASMLDEAINYVKFLKAVI 83
D ++ML+EA++YV+FL+ I
Sbjct: 243 DISTMLEEAVHYVRFLQQQI 262
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMK 212
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPY 115
I + +P V+F L G+ +
Sbjct: 213 IAAS-------NPVVSFASLSGAMSF 231
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 129 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEF 184
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 20/97 (20%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNP---------------MKLSTDPQSVAARQRRHRISDR 49
N T ++G GN+K+ SK NP +TD S+A R RR +IS+R
Sbjct: 342 NGSTKSAGDGNQKQ----SKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISER 397
Query: 50 FKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 398 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 434
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVKFL+ I
Sbjct: 189 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQI 243
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 20/97 (20%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNP---------------MKLSTDPQSVAARQRRHRISDR 49
N T ++G GN+K+ SK NP +TD S+A R RR +IS+R
Sbjct: 342 NGSTKSAGDGNQKQ----SKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISER 397
Query: 50 FKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 398 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 434
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 20/97 (20%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNP---------------MKLSTDPQSVAARQRRHRISDR 49
N T ++G GN+K+ SK NP +TD S+A R RR +IS+R
Sbjct: 233 NGSTKSAGDGNQKQ----SKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISER 288
Query: 50 FKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 289 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 325
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMK----------LSTDPQSVAARQRRHRISDRFKILQ 54
N+K G +KK+K GSK P K +TD S+A R RR +IS+R + LQ
Sbjct: 109 NSKEGVEGTKSKKQKR-GSKEEPPKDYIHVRARRGQATDSHSLAERVRREKISERMRTLQ 167
Query: 55 SMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
++VPG K+ A MLDE INYV+ L+ + F
Sbjct: 168 NLVPGCDKVTGKALMLDEIINYVQTLQNQVEF 199
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQS+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 171 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 226
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVKFL+ I
Sbjct: 111 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKI 165
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVKFL+ I
Sbjct: 174 CATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQI 228
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVKFL+ I
Sbjct: 181 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKI 235
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 14 GNKKKKSSGSKSNPMKL-----------STDPQSVAARQRRHRISDRFKILQSMVPGGTK 62
+KK K+ GS+ KL +TD S+A R RR +I+ R K+LQ +VPG K
Sbjct: 161 ASKKSKNEGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNK 220
Query: 63 MD-TASMLDEAINYVKFLK 80
+ TA +LDE IN+V+FL+
Sbjct: 221 ISGTALVLDEIINHVQFLQ 239
>gi|255549295|ref|XP_002515701.1| DNA binding protein, putative [Ricinus communis]
gi|223545138|gb|EEF46648.1| DNA binding protein, putative [Ricinus communis]
Length = 244
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 30 LSTDPQSVAARQR-RHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHEN 88
LS++P RQR R + D+F+ILQ ++P +MDTA+ML EA NY+ FL+A + +
Sbjct: 100 LSSNPSQKNKRQRCRQTMGDKFRILQKLMPWDKRMDTATMLAEAYNYINFLQAQVKALQA 159
Query: 89 IINFAD----HHHHEHDPPV-AFGQLPGS 112
+ F D HH D V A G + G+
Sbjct: 160 MPLFDDPTSTHHSFNTDNYVCALGSVFGA 188
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R KILQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 181 ATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEF 236
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 100 ATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEF 155
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 298 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 353
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 211 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 201 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 256
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
>gi|255644404|gb|ACU22707.1| unknown [Glycine max]
Length = 185
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 28 MKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+K+S DPQSVAAR RR RIS+R KILQ +VPGGT
Sbjct: 152 VKISKDPQSVAARHRRERISERIKILQRLVPGGT 185
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 200 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 255
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 211 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
>gi|334200176|gb|AEG74015.1| lMYC5 [Hevea brasiliensis]
Length = 475
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
LA+G N + K G K N +L + A RQRR R++ RF L+S+VP +KMD AS+
Sbjct: 279 LAAGNTNGRFKKRGRKPNGKELPLN-HVEAERQRRKRLNHRFYALRSVVPNVSKMDKASL 337
Query: 69 LDEAINYVKFLKAVI 83
L +A+ Y++ LKA +
Sbjct: 338 LADAVTYIEELKAKV 352
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 201 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 256
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 211 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHENIINF 92
+++ R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W I+
Sbjct: 234 NLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGIVPM 293
Query: 93 ADHHHHEHDPPVAFGQLPGSFP 114
H+ PP+ G P
Sbjct: 294 MFPGTHQLMPPMGMGLNTACMP 315
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 201 ATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 256
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQASETQPFQ 147
++ + H ++ Q F PE S S + + + P+ QQ S+
Sbjct: 208 LSVINPELECHIDDLSAKQFQAYFTGLPEADSKQSIMADFRSFPLHQQGSI--------- 258
Query: 148 DFNVFQGEESETLMHLD 164
D++V G + +L D
Sbjct: 259 DYSVLNGTVTISLCSKD 275
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 176 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 231
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 297 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEF 352
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 357 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 412
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 346 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 401
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG KM A +LDE INY++ L+ + F
Sbjct: 126 ATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEF 181
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM-LDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQS+VPG K+ ++ LDE INYVK L+ + F
Sbjct: 115 ATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQVEF 170
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHE-- 87
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 153 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 212
Query: 88 -NIINFADHHHHEHDPPVAFGQL---PGSFPY 115
+N + E PP FGQ P P+
Sbjct: 213 LEAVNSRLNSGIEAFPPKDFGQQAFDPAGIPF 244
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMK 324
Query: 90 INFAD 94
++ D
Sbjct: 325 LSTVD 329
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 135 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEF 190
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 285 ATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMK 344
Query: 90 INFAD 94
++ D
Sbjct: 345 LSTVD 349
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 119 ATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 174
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHENIINF 92
+++ R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W I+
Sbjct: 231 NLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGIVPM 290
Query: 93 ADHHHHEHDPPVAFGQLPGSFP 114
H+ PP+ G P
Sbjct: 291 MFPGTHQLMPPMGMGLNTACMP 312
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 379 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 434
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 393 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 448
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 223 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEF 278
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 46/66 (69%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAIN 74
N K+ S+G+ S+ + + +++ ++RR+RI+++ K LQ+++P K D ASMLDEAI
Sbjct: 141 NFKQCSTGTSSSKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIE 200
Query: 75 YVKFLK 80
Y+K L+
Sbjct: 201 YLKKLQ 206
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 365 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 420
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ I F
Sbjct: 76 ATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEF 131
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 135 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEF 190
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 179 ATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 234
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 251
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDF 149
+ + V+ Q F S S + ++ P+ QQ S+ S P Q
Sbjct: 252 LAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSAINPNQTT 311
Query: 150 NV 151
++
Sbjct: 312 SI 313
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 261 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEF 316
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E AK A G+G K S + + +++ R+RR RI+++ + LQ ++P
Sbjct: 415 ESAGAKKTAGGRGGAGSKRS--------RAAEVHNLSERKRRDRINEKMRALQELIPNCN 466
Query: 62 KMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 467 KVDKASMLDEAIEYLKTLQLQVQI 490
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A+MLDE INYV+ L+ + F
Sbjct: 154 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 209
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 81 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 136
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A+MLDE INYV+ L+ + F
Sbjct: 154 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 209
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 251
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDF 149
+ + V+ Q F S S + ++ P+ QQ S+ S P Q
Sbjct: 252 LAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSAINPNQTT 311
Query: 150 NV 151
++
Sbjct: 312 SI 313
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A+MLDE INYV+ L+ + F
Sbjct: 156 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 211
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK+ GS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI+Y+
Sbjct: 295 KKQVCGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYL 354
Query: 77 KFLKAVI 83
K L+ +
Sbjct: 355 KSLQLQV 361
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 251
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDF 149
+ + V+ Q F S S + ++ P+ QQ S+ S P Q
Sbjct: 252 LAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSAINPNQTT 311
Query: 150 NV 151
++
Sbjct: 312 SI 313
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ I F
Sbjct: 83 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEF 138
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 202
Query: 90 INFADHHHH---EHDPPVAFGQ 108
+ + + E PP FGQ
Sbjct: 203 LEAVNSRMNPGIEVFPPKEFGQ 224
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 392 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 447
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 160 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 215
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIW-FHEN 88
+T P+S+A R RR RIS+R K LQ +VP K +TA MLDEA+ YVK L+ + E
Sbjct: 22 ATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVKDLSET 81
Query: 89 IINF 92
I+
Sbjct: 82 IVRL 85
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 150 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 205
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 202
Query: 90 INFADHHHH---EHDPPVAFGQ 108
+ + + E PP FGQ
Sbjct: 203 LEAVNSRMNPGIEVFPPKEFGQ 224
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 208
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM-LDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQS+VPG K+ ++ LDE INYVK L+ + F
Sbjct: 115 ATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEF 170
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ++VPG K+ A MLDE INYV+ L+ + F
Sbjct: 142 ATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEF 197
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 202
Query: 90 INFADHHHH---EHDPPVAFGQ 108
+ + + E PP FGQ
Sbjct: 203 LEAVNSRMNPGIEVFPPKEFGQ 224
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ I F
Sbjct: 80 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEF 135
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM-LDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ +M LDE INYV+ L+ + F
Sbjct: 138 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEF 193
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A+MLDE INYV+ L+ + F
Sbjct: 143 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 198
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + LQ MVPG K M A+MLDE INYV+ L+ + F
Sbjct: 152 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEF 207
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R KILQ +VPG K + AS+LDE INYV+ L+ + F
Sbjct: 121 ATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEF 176
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E AK A G+G K S + + +++ R+RR RI+++ + LQ ++P
Sbjct: 351 ESAGAKKTAGGQGGAGSKRS--------RAAEVHNLSERRRRDRINEKMRALQELIPNCN 402
Query: 62 KMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 403 KVDKASMLDEAIEYLKTLQLQVQI 426
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 208
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +I++R + LQ MVPG K M A+MLDE INYV+ L+ + F
Sbjct: 1035 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMK 1094
Query: 90 INFA 93
+N A
Sbjct: 1095 LNAA 1098
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 57 ATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEF 112
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 171 ATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 226
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 150 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 205
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 150 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 205
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 208 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 261
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 259 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 314
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 208 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 261
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 208 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 261
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+FL+
Sbjct: 13 ATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQ 63
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 12/86 (13%)
Query: 12 GKGNKKKKSSGSKSNPMKL-----------STDPQSVAARQRRHRISDRFKILQSMVPGG 60
G+G+ KK + S + KL +TD S+A R RR +I+ R K+LQ +VPG
Sbjct: 178 GRGSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGC 237
Query: 61 TKMD-TASMLDEAINYVKFLKAVIWF 85
K+ TA +LDE IN+V+ L+ + F
Sbjct: 238 NKISGTALVLDEIINHVQSLQRQVEF 263
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L S GNK + +GS QS R+RR RI+++ + LQ ++P K D ASM
Sbjct: 341 LKSADGNKASQRTGSSKRNRAAEVHNQS--ERRRRDRINEKMRTLQQLIPNSNKTDKASM 398
Query: 69 LDEAINYVKFLK---AVIWF 85
L+EAI Y+K L+ V+W
Sbjct: 399 LEEAIEYLKSLQFQLQVMWM 418
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 130 ATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEF 185
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella
moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella
moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella
moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella
moellendorffii]
Length = 125
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 40 ATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEF 95
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHENIINF 92
+++ R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W I+
Sbjct: 235 NLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGIVPM 294
Query: 93 ADHHHHEHDPPVAFGQLPGSFP 114
H+ PP+ G P
Sbjct: 295 MFPGTHQLMPPMGMGLNTACMP 316
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 132 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 191
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 192 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 245
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 132 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 191
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 192 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 245
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHEN 88
+TD S+A R RR +IS R K+LQS+VPG K+ A +LDE I+YV+FLK + N
Sbjct: 168 ATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDRVQVRIN 226
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 154 ATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 209
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R ILQ +VPG K + AS+LDE INY++ L+ + F
Sbjct: 138 ATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 193
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 256 ATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 311
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 144 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 203
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPE--SLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q F PE S S + + + P+ QQ S+ S
Sbjct: 204 LSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 257
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG TK+ A MLDE INYV+ L+ + F
Sbjct: 181 ATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEF 236
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 150 ATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEF 205
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 198 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEF 253
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 198 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEF 253
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 10 ASGKGNKKKKSSGSKSNPMKL---------STDPQSVAARQRRHRISDRFKILQSMVPGG 60
+SG+G + K++S P ++ +TD S+A R RR +I+++ + LQ++VPG
Sbjct: 110 SSGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGC 169
Query: 61 TK-MDTASMLDEAINYVKFLKAVIWF 85
K M A MLDE INYV+ L+ + F
Sbjct: 170 YKTMGMAIMLDEIINYVQSLQHQVEF 195
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 14/108 (12%)
Query: 11 SGKGNKKKKSS----GSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTA 66
SG G K+ S GSK + S + +++ R+RR RI+++ + LQ ++P K+D A
Sbjct: 321 SGDGRKEAGPSRTGLGSKRS---RSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKA 377
Query: 67 SMLDEAINYVKFLKAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFP 114
SMLDEAI Y+K L+ + I++ A ++ PPV F G +P
Sbjct: 378 SMLDEAIEYLKSLQLQV----QIMSMASGYYM---PPVMFPPGMGHYP 418
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR RIS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 241 ATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 296
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
+ KK+ GS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI
Sbjct: 300 ADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAI 359
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 360 EYLKTLQ 366
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ SG++S + + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K
Sbjct: 429 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKT 488
Query: 79 LK 80
L+
Sbjct: 489 LQ 490
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 132 ATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEF 187
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 277 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 332
>gi|356574313|ref|XP_003555293.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 353
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K KKS+ ++ + +TDPQSV AR+RR RI++R +ILQ +VP GTK+D ++ML+EA+ Y
Sbjct: 257 KGKKSTANRGS----ATDPQSVYARRRRERINERLRILQHLVPNGTKVDISTMLEEAVKY 312
Query: 76 VKFLKAVI 83
VKFL+ I
Sbjct: 313 VKFLQLQI 320
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+Y+ TL KG+K+ + GS S + + +++ R+RR RI+++ K LQ ++P
Sbjct: 282 DYLCYSTL---KGSKQVR--GSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN 336
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
K D ASMLDEAI Y+K L+ +
Sbjct: 337 KADKASMLDEAIEYLKTLQLQV 358
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 197 ATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 252
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 116 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 171
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
R RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 152 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQ 192
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 192 ATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 247
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 12 GKGNKKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDT 65
G KKK+++G S +ST AA R+RR +I+ R K LQ +VP +K D
Sbjct: 250 GDEEKKKRANGKSS----VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDK 305
Query: 66 ASMLDEAINYVKFLKAVIWFHENIINFA 93
ASMLDE I Y+K L+A + N IN +
Sbjct: 306 ASMLDEVIEYLKQLQAQVQMM-NRINMS 332
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ SG++S + + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K
Sbjct: 441 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKT 500
Query: 79 LK 80
L+
Sbjct: 501 LQ 502
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 284 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 339
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 18 KKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K++ G + N +K + D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y
Sbjct: 78 KRNGGRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 137
Query: 76 VKFLKAVI 83
+K L+ +
Sbjct: 138 LKQLQLQV 145
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 287 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 342
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 259 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 314
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 259 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 314
>gi|357453543|ref|XP_003597049.1| Transcription factor bHLH117 [Medicago truncatula]
gi|355486097|gb|AES67300.1| Transcription factor bHLH117 [Medicago truncatula]
Length = 285
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 34 PQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
PQS ARQRR ++S++ + LQ ++P +MD A++ +EA YVKFL+A +
Sbjct: 146 PQSNLARQRRQKLSEKTRCLQKLMPWDKRMDQATLYEEAYKYVKFLQAQL 195
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFADHH 96
R+RR RI+++ K LQ ++P K D ASMLDEAI Y+K L+ V+W I H
Sbjct: 261 RRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQLQVVWMGGGIAAAGVHQ 320
Query: 97 HHEHDPPVAFGQLP--GSFPYSPESLYS 122
P G+ P S P S LY+
Sbjct: 321 RTMVAAP---GRPPHVASLPASAPDLYT 345
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ SG++S + + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K
Sbjct: 301 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKT 360
Query: 79 LK 80
L+
Sbjct: 361 LQ 362
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 168 ATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEF 223
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 45/67 (67%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G ++ ++G++S + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI
Sbjct: 253 GGLRRSAAGARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAI 312
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 313 EYLKTLQ 319
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ++VPG TK+ A MLDE INYV+ L+ + F
Sbjct: 266 ATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEF 321
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK+ GS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI Y+
Sbjct: 250 KKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYL 309
Query: 77 KFLKAVI 83
K L+ +
Sbjct: 310 KSLQLQV 316
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ SG++S + + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K
Sbjct: 373 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKT 432
Query: 79 LK 80
L+
Sbjct: 433 LQ 434
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ++VPG K+ A MLDE INYV+ L+ + F
Sbjct: 13 ATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEF 68
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD SVA R RR +I++R + LQ +VPG K M A MLDE INYV+ L+ + F
Sbjct: 160 ATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMK 219
Query: 90 INFADHHH 97
+ A +H
Sbjct: 220 LTAASSYH 227
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 174 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 229
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 246 ATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 301
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 218 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEF 273
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 129 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 184
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 71 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 126
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 181 ATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 236
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L++ I
Sbjct: 187 CATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
>gi|193734712|gb|ACF19982.1| MYC2 [Hevea brasiliensis]
Length = 476
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
A+G ++ KK ++ N +L+ + A RQRR R++ RF L+S+VP +KMD AS+L
Sbjct: 283 AAGNTDRLKKRGRTQLNGKELTLNHVE-AERQRRERLNHRFYALRSVVPNVSKMDKASLL 341
Query: 70 DEAINYVKFLKAVI 83
+A+ Y+K LKA +
Sbjct: 342 ADAVTYIKELKAKV 355
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 30/146 (20%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFH--- 86
+T+ S+A R RR RIS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 253 ATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMK 312
Query: 87 ------------ENIINFADHHHHEHDPPV-AFGQLPG---SFPYSPESLYSSINNLAAA 130
E I++ HH P+ FG PG ++P +L A +
Sbjct: 313 LATVYPEMNVQIERILSSDIHHSKGGTAPILGFG--PGMNSAYPIPQVTLQ------AIS 364
Query: 131 PVPQQDSMQASETQPFQDF--NVFQG 154
P + ++Q+S P + N QG
Sbjct: 365 PAIESSTLQSSPMSPMPNVWDNELQG 390
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 287 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 342
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 146 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 201
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 181 ATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 236
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 146 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 201
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 376 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 431
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S++ R RR RIS+R ++LQS+VPG K+ A +LDE INYV+ L+ + F
Sbjct: 112 ATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEF 167
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 353 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 408
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 271 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 326
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L+ I
Sbjct: 184 CATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQI 238
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 411 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 466
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFADHH 96
R+RR RI+++ K LQ +VP K D AS+LDEAI Y+K L+ ++W +
Sbjct: 153 RRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIMWMTTGMAPMMFPG 212
Query: 97 HHEHDPPVAFGQLPGSFPYS 116
H+ P +A G P P +
Sbjct: 213 AHQLMPQMAMGLNPACMPTA 232
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHE-- 87
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 217
Query: 88 -NIINFADHHHHEHDPPVAFGQ 108
+N + E PP +GQ
Sbjct: 218 LEAVNSRLNTGIEAFPPKDYGQ 239
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 256 ATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 311
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 271 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 326
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 157 ATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEF 212
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 204
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 152 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 207
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 118 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEF 173
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella
moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella
moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella
moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella
moellendorffii]
Length = 102
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 23 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 78
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
>gi|302028371|gb|ADK91082.1| LMYC2 [Hevea brasiliensis]
Length = 475
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
A+G ++ KK ++ N +L+ + A RQRR R++ RF L+S+VP +KMD AS+
Sbjct: 281 FAAGNTDRLKKRGRAQLNGKELTLNYVE-AERQRRERLNHRFYALRSVVPNVSKMDKASL 339
Query: 69 LDEAINYVKFLKAVI 83
L +A+ Y+K LKA +
Sbjct: 340 LADAVTYIKELKAKV 354
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 12 GKGNKKKKSSGSKS-NPMK----------LSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
G G K+ K S SK P K +TD S+A R RR +IS R K+LQ +VPG
Sbjct: 256 GGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGC 315
Query: 61 TK-MDTASMLDEAINYVKFLKAVIWF 85
K + A MLDE INYV+ L+ + F
Sbjct: 316 NKVVGKAVMLDEIINYVQSLQRQVEF 341
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 127 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEF 182
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 113 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 168
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L+ I
Sbjct: 190 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQI 244
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 65 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 120
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDTASM 68
++++K +G KS+ +ST AA R+RR +I+ R KILQ +VP +K D ASM
Sbjct: 197 DEEEKKAGGKSS---VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKTDKASM 253
Query: 69 LDEAINYVKFLKAVI 83
LDE I Y+K L+A +
Sbjct: 254 LDEVIEYLKQLQAQV 268
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 128 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEF 183
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 164 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 219
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 175 ATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 230
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM-LDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQS+VPG K+ ++ LDE INYVK L+ + F
Sbjct: 115 ATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEF 170
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 114 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 169
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 153 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 208
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 34 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 89
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 118 ATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 173
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 154 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 209
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 118 ATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 173
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V +++ + K + +GSK N + + +++ R+RR RI+++ + LQ ++P
Sbjct: 432 EDVEEESVGAKKQAPARAGNGSKRN---RAAEVHNLSERRRRDRINEKMRALQELIPNCN 488
Query: 62 KMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 489 KVDKASMLDEAIEYLKTLQLQVQI 512
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 8 TLASGKGNKKKKSSGSKSNP-------------MKLSTDPQSVAARQRRHRISDRFKILQ 54
T +G G K + G K P +T+ S+A R RR +IS+R K+LQ
Sbjct: 227 TTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQ 286
Query: 55 SMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 287 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 318
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 8 TLASGKGNKKKKSSGSKSNP-------------MKLSTDPQSVAARQRRHRISDRFKILQ 54
T +G G K + G K P +T+ S+A R RR +IS+R K+LQ
Sbjct: 228 TTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQ 287
Query: 55 SMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 288 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 319
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V+ K +G+G+ K+S + + + + R+RR RI+++ + LQ ++P
Sbjct: 4 ESVDTKKPVTGRGSTAKRSRAA---------EVHNQSERRRRDRINEKMRALQELIPNSN 54
Query: 62 KMDTASMLDEAINYVKFLK 80
K D ASMLDEAI Y+K L+
Sbjct: 55 KTDKASMLDEAIEYLKMLQ 73
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 18 KKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K+S + N +K S D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y
Sbjct: 79 KRSGAKQRNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 138
Query: 76 VKFLK 80
+K L+
Sbjct: 139 LKQLQ 143
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK+ GS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI Y+
Sbjct: 263 KKQVRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYL 322
Query: 77 KFLKAVI 83
K L+ +
Sbjct: 323 KSLQLQV 329
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L+ I
Sbjct: 192 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQI 246
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 8 TLASGKGNKKKKSSGSKSNP-------------MKLSTDPQSVAARQRRHRISDRFKILQ 54
T +G G K + G K P +T+ S+A R RR +IS+R K+LQ
Sbjct: 217 TTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQ 276
Query: 55 SMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 277 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 308
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
Length = 66
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 14 NLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQ 58
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 18 KKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K++ G + N +K + D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y
Sbjct: 78 KRNGGRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 137
Query: 76 VKFLKAVI 83
+K L+ +
Sbjct: 138 MKQLQLQV 145
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM-LDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQS+VPG K+ ++ LDE INYVK L+ + F
Sbjct: 49 ATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEF 104
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella
moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella
moellendorffii]
Length = 64
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 14 NLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQ 58
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 136 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 191
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R + LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 130 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 185
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 248 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 303
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
R+RR RI+++ K LQ +VP +K D ASMLDE I Y+K L+A + F
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQF 316
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 1 MEYVNAKTLASGKGNKKKKSS---GSKSNPMKL------STDPQSVAARQRRHRISDRFK 51
ME N K S K K+ SS G+K N + L +T+ S+A R RR +IS+R K
Sbjct: 108 MERDNRKI--SPKTQSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMK 165
Query: 52 ILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 166 LLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEF 200
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 147 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 202
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 192 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 247
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 145 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 200
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 153 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 208
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 360 ATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 415
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RI +R KILQ +VPG K + A LDE INY++ L+ + F
Sbjct: 150 ATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEF 205
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 244 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 299
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 179 ATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 234
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 176 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 231
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHENIINF 92
+++ R+RR RI+++ + LQ ++P K D AS+LDE I Y+K L+ ++W +
Sbjct: 236 NLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAPM 295
Query: 93 ADHHHHEHDPPVAFGQLPGSFP 114
H+ PP+A G G P
Sbjct: 296 MFPGAHQFMPPMALGMNSGCIP 317
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLK 80
+TD S+A R RR RIS+R + LQ +VPG +K+ A MLDE INYV+ L+
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 203
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
Query: 7 KTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTA 66
K + +G+G+ K+S ++ + + + R+RR RI+++ + LQ ++P K D A
Sbjct: 720 KPITTGRGSTTKRSRAAEVH---------NQSERRRRDRINEKMRALQELIPNSNKTDKA 770
Query: 67 SMLDEAINYVKFLK 80
SMLDEAI+Y+K L+
Sbjct: 771 SMLDEAIDYLKILQ 784
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR RIS+R ++LQ++VPG K+ A +LDE INYV+ L+ + F
Sbjct: 146 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 201
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 263 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 318
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 263 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 318
>gi|224994136|dbj|BAH28881.1| bHLH transcription factor LjTT8 [Lotus japonicus]
Length = 678
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G+ + G+K P + +A R+RR ++++RF IL+S+VP TKMD AS+L + I
Sbjct: 452 GDPAARLRGNKGTPQDEPSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTI 511
Query: 74 NYVKFLKAVI 83
YVK L+ I
Sbjct: 512 EYVKQLRRKI 521
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 380 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 435
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 151 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 206
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
+ KK+ GS S+ + + +++ R+RR RI+++ + LQ ++P K D ASMLDEAI
Sbjct: 351 ADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 410
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 411 EYLKSLQ 417
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 308 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 363
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 145 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 200
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFADHH 96
R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ V+W +
Sbjct: 216 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMTSGMAPMMFPG 275
Query: 97 HHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAP 131
H+ PP+A G P + +N +A P
Sbjct: 276 SHQFMPPMAVGMNSACLPAA-----QGLNQMARVP 305
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 230 ATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 285
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 42 RRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 290
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 255 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 42 RRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 289
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 89 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 144
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 308 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 363
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 54 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 109
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 146 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 201
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFADHH 96
R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ V+W +
Sbjct: 207 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMTSGMAPMMFPG 266
Query: 97 HHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAP 131
H+ PP+A G P + +N +A P
Sbjct: 267 SHQFMPPMAVGMNSACLPAA-----QGLNQMARVP 296
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 44 ATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEF 99
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFA 93
++ R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ ++W +
Sbjct: 327 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMM 386
Query: 94 DHHHHEHDPPVAFGQLPGSFP 114
H+ PP+A G P
Sbjct: 387 FPGAHQFMPPMAVGMNSACMP 407
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 255 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK--MDTASMLDEAINYVKFL-KAVIWFH 86
+T P+S+A R RR RIS+R + LQ +VP K ++ A MLDEA+ YVK L K V
Sbjct: 474 CATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQELA 533
Query: 87 ENIINFADHHHHEHDPPVAF 106
EN H+P A+
Sbjct: 534 ENRAKCT----CTHNPDCAY 549
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHENIINF 92
+++ R+RR RI+++ + LQ ++P K D AS+LDE I Y+K L+ ++W +
Sbjct: 330 NLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAPM 389
Query: 93 ADHHHHEHDPPVAFGQLPGSFP 114
H+ P +A G PG P
Sbjct: 390 MFPGVHQFIPQMALGMNPGCIP 411
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 248 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 303
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 209
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 38 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 93
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S+ RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 246 SMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 290
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 137 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 192
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 27 PMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
P+KL T +S AA R+RR RI+++ K LQ ++P K D ASMLDEAI Y+K L
Sbjct: 256 PLKLPTARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTL 315
Query: 80 K---AVIWF 85
+ ++W
Sbjct: 316 QMQVQMMWM 324
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V K A+G+G K S + + +++ R+RR RI+++ + LQ ++P
Sbjct: 448 ESVGVKKGAAGRGVAGSKRS--------RAAEVHNLSERRRRDRINEKMRALQELIPNCN 499
Query: 62 KMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 500 KVDKASMLDEAIEYLKTLQLQVQM 523
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 249 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 304
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 2 EYVNAKTLASGK-GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
E V AK AS + GN K+ ++ +++ R+RR RI+++ + LQ ++P
Sbjct: 301 ESVGAKKPASARAGNGSKRGRAAEV---------HNLSERRRRDRINEKMRALQELIPNC 351
Query: 61 TKMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 352 NKVDKASMLDEAIEYLKTLQLQVQI 376
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 260 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 315
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 2 EYVNAKTLASGK-GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
E V AK AS + GN K+ ++ +++ R+RR RI+++ + LQ ++P
Sbjct: 301 ESVGAKKPASARAGNGSKRGRAAEV---------HNLSERRRRDRINEKMRALQELIPNC 351
Query: 61 TKMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 352 NKVDKASMLDEAIEYLKTLQLQVQI 376
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 24/105 (22%)
Query: 23 SKSNPMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
++ P K++T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y
Sbjct: 285 ARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 344
Query: 76 VKFLK---AVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSP 117
+K L+ ++W + PPV F PG Y P
Sbjct: 345 LKSLQLQLQMMWMGSGMA-----------PPVMF---PGVHQYLP 375
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 179 ATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 234
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMK----------LSTDPQSVAARQRRHRISDRFKILQ 54
N++ ++GK K+KSS S P + +T+ S+A R RR +IS+R ++LQ
Sbjct: 204 NSRGKSTGK-QTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQ 262
Query: 55 SMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 263 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 294
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ ++PG K+ A MLDE INYV+ L+ + F
Sbjct: 199 ATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEF 254
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFA 93
++ R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ ++W +
Sbjct: 227 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMM 286
Query: 94 DHHHHEHDPPVAFGQLPGSFP 114
H+ PP+A G P
Sbjct: 287 FPGAHQFMPPMAVGMNSACMP 307
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFA 93
++ R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ ++W +
Sbjct: 238 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMM 297
Query: 94 DHHHHEHDPPVAFGQLPGSFP 114
H+ PP+A G P
Sbjct: 298 FPGAHQFMPPMAVGMNSACMP 318
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 178 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 233
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 2 EYVNAKTLASGK-GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
E V AK AS + GN K+ ++ +++ R+RR RI+++ + LQ ++P
Sbjct: 301 ESVGAKKPASARAGNGSKRGRAAEV---------HNLSERRRRDRINEKMRALQELIPNC 351
Query: 61 TKMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 352 NKVDKASMLDEAIEYLKTLQLQVQI 376
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 2 EYVNAKTLASGK-GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
E V AK AS + GN K+ ++ +++ R+RR RI+++ + LQ ++P
Sbjct: 301 ESVGAKKPASARAGNGSKRGRAAEV---------HNLSERRRRDRINEKMRALQELIPNC 351
Query: 61 TKMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 352 NKVDKASMLDEAIEYLKTLQLQVQI 376
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 2 EYVNAKTLASGK-GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGG 60
E V AK AS + GN K+ ++ +++ R+RR RI+++ + LQ ++P
Sbjct: 301 ESVGAKKPASARAGNGSKRGRAAEV---------HNLSERRRRDRINEKMRALQELIPNC 351
Query: 61 TKMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 352 NKVDKASMLDEAIEYLKTLQLQVQI 376
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQ +VPG K+ A M+DE INYV+ L+ + F
Sbjct: 225 ATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEF 280
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 148 ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMK 207
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQAS 141
++ + H ++ Q + P +S S + + + P+ QQ S+ S
Sbjct: 208 LSVINPELECHIDDLSAKQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYS 259
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 6 AKTLASGKGNKKKKSSGSKSNPMKL------STDPQSVAARQRRHRISDRFKILQSMVPG 59
K L K + + GSK N + + +T+ S+A R RR +IS+R ++LQ +VPG
Sbjct: 207 GKQLLKQKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPG 266
Query: 60 G-TKMDTASMLDEAINYVKFLKAVIWF 85
K A MLDE INYV+ L+ + F
Sbjct: 267 CDKKTGKAVMLDEIINYVQSLQQQVEF 293
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ ++PG K+ A MLDE INYV+ L+ + F
Sbjct: 199 ATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEF 254
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFA 93
++ R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ ++W +
Sbjct: 343 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMM 402
Query: 94 DHHHHEHDPPVAFGQLPGSFP 114
H+ PP+A G P
Sbjct: 403 FPGAHQFMPPMAVGMNSACMP 423
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 318
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 145 ATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEF 200
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 241 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 296
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 270 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 325
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+T QS+ AR+RR RI+ R +ILQ +VP GTK+D ++ML+EA++YVKFL+ I I+
Sbjct: 198 ATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVEVQIV 257
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 5 NAKTLASGKGNKKKKSSGS---KSNPMKL------STDPQSVAARQRRHRISDRFKILQS 55
N++ ++GK K+K S+ + K N + + +T+ S+A R RR +IS+R ++LQ
Sbjct: 51 NSRGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQE 110
Query: 56 MVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+VPG K+ A MLDE INYV+ L+ + F
Sbjct: 111 LVPGCNKITGKAVMLDEIINYVQSLQQQVEF 141
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 81 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 136
>gi|224072329|ref|XP_002303693.1| predicted protein [Populus trichocarpa]
gi|222841125|gb|EEE78672.1| predicted protein [Populus trichocarpa]
Length = 465
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K+ + G K +P+ A RQRR R++ RF L+S+VP +KMD AS+L +A+NY
Sbjct: 276 KRGRKPGGKESPLN-----HVEAERQRRERLNHRFYALRSVVPNVSKMDRASLLADAVNY 330
Query: 76 VKFLK 80
+K LK
Sbjct: 331 IKELK 335
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R +LQ +VPG ++ A MLDE INYV+ L+ + F
Sbjct: 201 ATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEF 256
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 306 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 361
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR RIS+R K L+ +VPG K+ A MLDE INYV+ L+
Sbjct: 157 ATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQS+VPG K+ A MLDE I+YV+ L+ + F
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEF 242
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K + A MLDE INYV+ L+ + F
Sbjct: 272 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEF 327
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 276 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 331
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K + A MLDE INYV+ L+ + F
Sbjct: 270 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEF 325
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K + A MLDE INYV+ L+ + F
Sbjct: 270 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEF 325
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ++VPG +++ A ML+E INYVK L+ I F
Sbjct: 157 ATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEF 212
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R +LQ +VPG ++ A MLDE INYV+ L+ + F
Sbjct: 198 ATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEF 253
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 272 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 327
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 636 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 691
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 175 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 234
Query: 90 INFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDF 149
+ + V+ Q F S S + ++ P+ QQ S+ + P Q
Sbjct: 235 LAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDSFAINPNQTT 294
Query: 150 NV 151
++
Sbjct: 295 SI 296
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 135 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 190
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 170 ATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 225
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 107 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEF 162
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQS+VPG K+ A MLDE I+YV+ L+ + F
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEF 242
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 157 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 212
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENII 90
+T QS+ AR+RR RI+ R +ILQ +VP GTK+D ++ML+EA++YVKFL+ I I+
Sbjct: 217 ATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVEVQIV 276
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 18 KKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVK 77
K+ GS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI Y+K
Sbjct: 289 KQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLK 348
Query: 78 FLK 80
L+
Sbjct: 349 TLQ 351
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 5 NAKTLASGK---GNKKKKSSGSKSNPMKL------STDPQSVAARQRRHRISDRFKILQS 55
++ T+A+ K N K + G+K + + + +T+ S+A R RR +IS+R K LQ
Sbjct: 48 DSSTMANAKPSGTNAKNSTDGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 107
Query: 56 MVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 108 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 138
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 107 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEF 162
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L S GN K SGS + + +++ R+RR RI+++ + LQ ++P K D ASM
Sbjct: 167 LDSMAGNNPTKRSGSTRR--SRAAEVHNLSERRRRDRINEKMRALQELIPHCYKTDKASM 224
Query: 69 LDEAINYVKFLK---AVIWF 85
LDEAI Y+K L+ V+W
Sbjct: 225 LDEAIEYLKSLQLQLQVMWM 244
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 24/105 (22%)
Query: 23 SKSNPMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
++ P K++T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y
Sbjct: 304 ARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 363
Query: 76 VKFLK---AVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSP 117
+K L+ ++W + PPV F PG Y P
Sbjct: 364 LKSLQLQLQMMWMGSGMA-----------PPVMF---PGVHQYLP 394
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 187 ATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 242
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+ R K+LQ +VPG K+ TA +LDE IN+V+ L+ + F
Sbjct: 184 ATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVEF 239
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 161 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 216
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 247 ATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 302
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 155 ATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 210
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K+ A +LDE INY++ L+ + F
Sbjct: 148 ATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEF 203
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 24/105 (22%)
Query: 23 SKSNPMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
++ P K++T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y
Sbjct: 304 ARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 363
Query: 76 VKFLK---AVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSP 117
+K L+ ++W + PPV F PG Y P
Sbjct: 364 LKSLQLQLQMMWMGSGMA-----------PPVMF---PGVHQYLP 394
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 348 ATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 403
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEF 247
>gi|449445714|ref|XP_004140617.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
++ L +G K + G K N K + A RQRR ++++RF L+S+VP ++MD
Sbjct: 222 DSPVLKTGVMKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMD 281
Query: 65 TASMLDEAINYVKFLKAVI 83
AS+L +A++Y+ LKA +
Sbjct: 282 KASLLSDAVSYINALKAKV 300
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 348 ATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 403
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
+ KK+ GS + + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI
Sbjct: 292 ADAKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAI 351
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 352 EYLKSLQ 358
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 144 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEF 199
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R RR RISDR + LQ +VP K +TA ML+EA+ YVK L+ I
Sbjct: 90 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQI 144
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 42 RRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
RR RI++R K LQ +VP K D ASMLDE I+YVKFL+
Sbjct: 142 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 180
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
+ KK+ GS + + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI
Sbjct: 254 ADAKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAI 313
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 314 EYLKSLQ 320
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG +K+ A ML+E INYV+ L+ I F
Sbjct: 13 ATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQIEF 68
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHE-- 87
+TD +A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 158 ATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 217
Query: 88 -NIINFADHHHHEHDPPVAFGQ 108
+N + E PP +GQ
Sbjct: 218 LEAVNSRLNTGIEAFPPKDYGQ 239
>gi|449519754|ref|XP_004166899.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
++ L +G K + G K N K + A RQRR ++++RF L+S+VP ++MD
Sbjct: 222 DSPVLKTGVMKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMD 281
Query: 65 TASMLDEAINYVKFLKAVI 83
AS+L +A++Y+ LKA +
Sbjct: 282 KASLLSDAVSYINALKAKV 300
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 256 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 311
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +I++R + LQ +VPG K M A MLDE INYV+ L+ + F
Sbjct: 154 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMK 213
Query: 90 INFADHHH 97
+ A ++
Sbjct: 214 LTAASQYY 221
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 18 KKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K+S + N +K + D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y
Sbjct: 79 KRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 138
Query: 76 VKFLK 80
+K L+
Sbjct: 139 LKQLQ 143
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 414 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 469
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 213 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 268
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 228 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 283
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG ++ A +LDE INYV+ L+ + F
Sbjct: 152 ATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEF 207
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 211 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 266
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 260 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 315
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 267 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 322
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 320
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V +++ K K +GSK + + + +++ R+RR RI+++ + LQ ++P
Sbjct: 301 EDVEEESVGVRKSAPAKGGTGSKRS---RAAEVHNLSERRRRDRINEKMRALQELIPNCN 357
Query: 62 KMDTASMLDEAINYVKFLKAVIWF 85
K+D ASMLDEAI Y+K L+ +
Sbjct: 358 KVDKASMLDEAIEYLKTLQLQVQI 381
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 18 KKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K+S + N +K + D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y
Sbjct: 79 KRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 138
Query: 76 VKFLK 80
+K L+
Sbjct: 139 LKQLQ 143
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 267 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 322
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V +++ K K +GSK + + + +++ R+RR RI+++ + LQ ++P
Sbjct: 437 EDVEEESVGVRKSAPAKGGTGSKRS---RAAEVHNLSERRRRDRINEKMRALQELIPNCN 493
Query: 62 KMDTASMLDEAINYVKFLK 80
K+D ASMLDEAI Y+K L+
Sbjct: 494 KVDKASMLDEAIEYLKTLQ 512
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 12 GKGNKKKKSSGSKSNPMKL-STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G K+ +S + KL S V+ ++RR RI+++ K LQ ++P TK D SMLD
Sbjct: 120 GGGEGKEAASQEEEQTPKLRSVIAHLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLD 179
Query: 71 EAINYVKFLKAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAA 130
EAI+Y+K L+ + + G+ G P P L ++ + A
Sbjct: 180 EAIDYLKSLQLQLQM------------------LVMGK--GMAPVVPPELQQYMHYITAD 219
Query: 131 PVPQQDSMQASETQPFQDFNVFQGEES 157
P Q ++ SE +PFQ + Q +S
Sbjct: 220 PS-QIPPIRPSEPRPFQITHATQQRQS 245
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA---VIWFHENIINFADHH 96
R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W +
Sbjct: 258 RRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMSTGMAPMMIPG 317
Query: 97 HHEHDPPVAFG 107
H+ PP+ G
Sbjct: 318 AHQLMPPMTMG 328
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium
distachyon]
Length = 198
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G ++ S + + S D + + R+RR RI+++ K LQ ++P TK D SMLDEAI
Sbjct: 4 GRAARRMSSAPTTRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAI 63
Query: 74 NYVKFLK 80
+Y+K L+
Sbjct: 64 DYLKSLQ 70
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella
moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella
moellendorffii]
Length = 85
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLK 80
+T P+S+A R RR RIS+R + LQ +VP K +T+ MLDEA+ Y+KFL+
Sbjct: 31 CATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQ 82
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 378 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 433
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K+LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 183 ATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEF 238
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V +++ K K +GSK + + + +++ R+RR RI+++ + LQ ++P
Sbjct: 422 EDVEEESVGVRKSAPAKGGTGSKRS---RAAEVHNLSERRRRDRINEKMRALQELIPNCN 478
Query: 62 KMDTASMLDEAINYVKFLK 80
K+D ASMLDEAI Y+K L+
Sbjct: 479 KVDKASMLDEAIEYLKTLQ 497
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V K A +G K S + + +++ R+RR RI+++ + LQ ++P
Sbjct: 445 ESVGGKKAAPARGGTGSKRS--------RAAEVHNLSERRRRDRINEKMRALQELIPNCN 496
Query: 62 KMDTASMLDEAINYVKFLK 80
K+D ASMLDEAI Y+K L+
Sbjct: 497 KVDKASMLDEAIEYLKTLQ 515
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 376 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 431
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LDE INY++ L+ + F
Sbjct: 98 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWFHENI 89
+TD S+A R RR +I +R K+LQ +VPG +K+ A MLDE INYV+ L+ +
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEVRRVC 322
Query: 90 INFADH 95
+ H
Sbjct: 323 LLCIGH 328
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L S GNK S ++S+ + + + + R+RR RI+++ + LQ ++P K D ASM
Sbjct: 341 LKSADGNKA--SQRTRSSRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASM 398
Query: 69 LDEAINYVKFLK---AVIWF 85
L+EAI Y+K L+ V+W
Sbjct: 399 LEEAIEYLKSLQFQLQVMWM 418
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K+LQ +VP K+ A MLDE INYV+ L+ + F
Sbjct: 39 ATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEF 94
>gi|449495155|ref|XP_004159750.1| PREDICTED: transcription factor MYC4-like [Cucumis sativus]
Length = 443
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 16 KKKKSSGSKSNPMKLSTDPQS--VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
KK+ +K+N +LS+ P + A RQRR +++ RF L+S+VP +KMD AS+L +A
Sbjct: 255 KKRGKRSAKNNKTELSSLPVNHVEAERQRRQKLNQRFYALRSVVPNVSKMDKASLLADAA 314
Query: 74 NYVKFLKAVI 83
Y+K LK+ +
Sbjct: 315 EYIKELKSKV 324
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 164 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VP +K+ A MLDE INYV+ L+ I F
Sbjct: 32 ATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQIEF 87
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 10 ASGKGNKKKKSSGSKSNPMKL---------STDPQSVAARQRRHRISDRFKILQSMVPGG 60
+ G+G + K++ P ++ +TD S+A R RR +I+++ + LQ++VPG
Sbjct: 104 SCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGC 163
Query: 61 TK-MDTASMLDEAINYVKFLKAVIWFHENIINFADHHH 97
K M A MLDE INYV+ L+ + F +N A ++
Sbjct: 164 YKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYY 201
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 365 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 420
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + LQ +VPG K M A MLDE INYV+ L+ + F
Sbjct: 164 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 219
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 27 PMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
P KL+T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y+K L
Sbjct: 26 PQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTL 85
Query: 80 KA---VIWF 85
+ ++W
Sbjct: 86 QMQVQMMWM 94
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 309 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 364
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 105 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEF 160
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 10/77 (12%)
Query: 23 SKSNPMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
++ P K++T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y
Sbjct: 314 ARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 373
Query: 76 VKFLK---AVIWFHENI 89
+K L+ ++W I
Sbjct: 374 LKSLQLQVQMMWMGSGI 390
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 376 ATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 431
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLK 80
+TD S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+
Sbjct: 448 ATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 498
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ +VPG K+ A MLDE INY++ L+ + F
Sbjct: 55 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEF 110
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKA-VIWFHE 87
+T P+S+A R RR RIS+R K LQ +VP K +TA MLDE + YVK L+ V E
Sbjct: 11 CATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQVKVSELQE 70
Query: 88 NI 89
I
Sbjct: 71 TI 72
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHENIINFADHH 96
R+RR RI+++ + LQ ++P K D AS+LDEAI Y+K L+ ++W +
Sbjct: 245 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIMWMTTGMAPMMFPG 304
Query: 97 HHEHDPPVAFGQLPGSFP 114
H+ PP+A G P
Sbjct: 305 AHQFMPPMAMGMNSACMP 322
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 131 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEF 186
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella
moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella
moellendorffii]
Length = 85
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ R+RR RI+++ K LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQ 70
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 163 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 131 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEF 186
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + LQ MVPG K M A+MLDE INYV+ L+ + F
Sbjct: 1046 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEF 1101
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 375 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 430
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 12 GKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLD 70
G G ++K+ + +T+ S+A + RR +IS+R K+LQ +VPG +K+ A MLD
Sbjct: 136 GAGERQKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLD 195
Query: 71 EAINYVKFLKAVIWF 85
E INYV+ L+ + F
Sbjct: 196 EIINYVQSLQRQVEF 210
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 163 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella
moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella
moellendorffii]
Length = 85
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ R+RR RI+++ K LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQ 70
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDTASM 68
++++K +G KS+ +ST AA R+RR +I+ R K LQ +VP +K D ASM
Sbjct: 195 DEEEKKAGGKSS---VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASM 251
Query: 69 LDEAINYVKFLKAVI 83
LDE I Y+K L+A +
Sbjct: 252 LDEVIEYLKQLQAQV 266
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 310 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 332 ATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 387
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHE 87
+ + +++ R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W
Sbjct: 405 AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTT 464
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFP 114
I+ H+ PP+ G P
Sbjct: 465 GIVPMMFPGTHQLMPPMGMGLNTACMP 491
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLK 80
+TD S+A R RR +I++R + LQ +VPG K M A+MLDE INYV+ L+
Sbjct: 155 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 27 PMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFL 79
P KL+T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y+K L
Sbjct: 305 PQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTL 364
Query: 80 K---AVIWF 85
+ ++W
Sbjct: 365 QMQVQMMWM 373
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 310 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 14 GNK--KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDE 71
GNK +K +G S+ + ++ ++RRH+I++RFK LQ +VPG +K + AS LD+
Sbjct: 161 GNKEMRKAPAGGGSSRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKSNQASTLDQ 220
Query: 72 AINYVKFLK 80
I+Y+K L+
Sbjct: 221 TIHYMKSLQ 229
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 309 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 364
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I +R K+LQS+VP K+ A MLDE INYV+ L+ + F
Sbjct: 265 ATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEF 320
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + LQ +VPG K M A MLDE INYV+ L+ + F
Sbjct: 80 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 135
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE---NIINFA 93
++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+ I ++
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 279
Query: 94 DHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAA-PVPQQDSMQASETQ 144
++ P +A G + + P P S N LAA P+P Q M S Q
Sbjct: 280 YPGMQQYMPHMAMG-MGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQ 330
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHE---NIINFA 93
++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+ I ++
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 279
Query: 94 DHHHHEHDPPVAFGQLPGSFPYSPESLYSSINNLAAA-PVPQQDSMQASETQ 144
++ P +A G + + P P S N LAA P+P Q M S Q
Sbjct: 280 YPGMQQYMPHMAMG-MGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQ 330
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 131 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEF 186
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 310 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ +VPG +K+ A MLDE INYV+ L+ + F
Sbjct: 324 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 379
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R K LQ++VPG +++ A ML+E INYVK L+ I F
Sbjct: 26 ATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEF 81
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 11/73 (15%)
Query: 8 TLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTAS 67
T A G G+K+ +++ + +++ R+RR RI+++ + LQ ++P K+D AS
Sbjct: 451 TSARGAGSKRSRAA-----------EVHNLSERRRRDRINEKMRALQELIPNCNKVDKAS 499
Query: 68 MLDEAINYVKFLK 80
MLDEAI Y+K L+
Sbjct: 500 MLDEAIEYLKTLQ 512
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 10/72 (13%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDTASML 69
KKK+++G S +ST AA R+RR +I+ R K LQ +VP +K D ASML
Sbjct: 254 KKKRANGKSS----VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKSDKASML 309
Query: 70 DEAINYVKFLKA 81
DE I Y+K L+A
Sbjct: 310 DEVIEYLKQLQA 321
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDTASM 68
++++K +G KS+ +ST AA R+RR +I+ R K LQ +VP +K D ASM
Sbjct: 195 DEEEKKAGGKSS---VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASM 251
Query: 69 LDEAINYVKFLKAVI 83
LDE I Y+K L+A +
Sbjct: 252 LDEVIEYLKQLQAQV 266
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L S GNK + +GS + + +++ R+RR RI+++ K LQ ++P +K D ASM
Sbjct: 49 LKSALGNKSSQRTGSARR--NRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASM 106
Query: 69 LDEAINYVK 77
L+EAI Y+K
Sbjct: 107 LEEAIEYLK 115
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+++ K LQ++VPG K M A MLDE INYV+ L+ + F
Sbjct: 159 ATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEF 214
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 135 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEF 190
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR RI+ + K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 276
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+ I
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK SGS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI+Y+
Sbjct: 246 KKNISGS-STKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYL 304
Query: 77 KFLK 80
K L+
Sbjct: 305 KSLQ 308
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 6 AKTLASGKGNKKKKSSGSK-SNPMKL-----------STDPQSVAARQRRHRISDRFKIL 53
A+T AS N K SK S P K +TD S+A R RR +IS+R +L
Sbjct: 54 AETEASSAANNKTAEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMNML 113
Query: 54 QSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
Q +VPG K + A +LDE INY++ L+ + F
Sbjct: 114 QDLVPGCNKVIGKALVLDEIINYIQSLQCQVEF 146
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+
Sbjct: 61 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 111
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK SGS S + + +++ R+RR RI+++ K LQ ++P K D ASMLDEAI+Y+
Sbjct: 246 KKNISGS-STKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYL 304
Query: 77 KFLK 80
K L+
Sbjct: 305 KSLQ 308
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ I F
Sbjct: 105 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEF 160
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+ I
Sbjct: 290 NLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+++ R+RR RI++R K LQ ++P K D ASMLDEAI Y+K L+ I
Sbjct: 299 NLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 346
>gi|158515841|gb|ABW69688.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 438 FLHAKNSNGGDGAATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 497
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 498 KMDKASILGDTIEYVKQLRRRI 519
>gi|97974133|dbj|BAE94394.1| bHLH transcriptional factor [Ipomoea nil]
Length = 669
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 443 FLHAKNSHCGGGADTIPSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 502
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 503 KMDKASILGDTIEYVKQLRRRI 524
>gi|47232558|dbj|BAD18982.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
gi|125659425|dbj|BAF46858.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 665
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 438 FLHAKNSNGGDGAATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 497
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 498 KMDKASILGDTIEYVKQLRRRI 519
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G + + SGSK + + + +++ ++RR +I+++ K LQS++P K D ASMLDEAI
Sbjct: 13 GARPRGGSGSKRS---RAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAI 69
Query: 74 NYVKFLKAVIWF 85
Y+K L+ +
Sbjct: 70 EYLKQLQLQVQM 81
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + LQ +VPG K M A MLDE INYV+ L+ + F
Sbjct: 163 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 218
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFADHHH 97
+ R+RR RI+++ K LQ ++P TK D SMLDEAI+Y+K L+ +
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM------------ 68
Query: 98 HEHDPPVAFGQLPGSFPYSPESLYSSINNLAAAPVPQQDSMQASETQPFQDFNVFQGEES 157
+ G+ G P P L ++ + A P Q ++ SE +PFQ + Q +S
Sbjct: 69 ------LVMGK--GMAPVVPPELQQYMHYITADPS-QIPPIRPSEPRPFQITHATQQRQS 119
>gi|355320016|emb|CBY88797.1| basic helix-loop-helix transcription factor [Humulus lupulus]
Length = 695
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+Y + + +G G+ +S P + +A R+RR ++++RF IL+S+VP T
Sbjct: 444 KYRDENSPKAGAGDTTTRSFRKGGTPQDELSANHVMAERRRREKLNERFIILRSLVPFVT 503
Query: 62 KMDTASMLDEAINYVKFLK 80
KMD AS+L + I YVK L+
Sbjct: 504 KMDKASILGDTIEYVKQLR 522
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR RI+ + K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 238
>gi|158515837|gb|ABW69686.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 662
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 435 FLHAKNSNGGDGAATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 494
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 495 KMDKASILGDTIEYVKQLRRRI 516
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 13 KGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEA 72
K K +SSGS +K ++ + R+RR +I+ R K LQ +VP +K D ASMLDE
Sbjct: 218 KATKVDRSSGSNKR-IKANSVVHKQSERRRRDKINQRMKELQKLVPNSSKTDKASMLDEV 276
Query: 73 INYVKFLKAVI 83
I Y+K L+A +
Sbjct: 277 IQYMKQLQAQV 287
>gi|301072754|gb|ADK56287.1| LMYC1 [Hevea brasiliensis]
Length = 476
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A RQRR R++ RF L+S VP +KMD AS+L +A+ Y+K LKA +
Sbjct: 310 AERQRRERLNHRFYALRSAVPNVSKMDKASLLADAVTYIKELKATV 355
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+++ + LQ++VPG K M A MLDE INYV+ L+ + F
Sbjct: 162 ATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEF 217
>gi|158515839|gb|ABW69687.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 437 FLHAKNSNGGDGAATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 496
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 497 KMDKASILGDTIEYVKQLRRRI 518
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 18 KKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K++ + N +K + D Q +++ ++RR +I+++ K LQ ++P K D ASMLDEAI Y
Sbjct: 75 KRNGAKQRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 134
Query: 76 VKFLK 80
+K L+
Sbjct: 135 LKQLQ 139
>gi|125659430|dbj|BAF46859.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 664
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 437 FLHAKNSNGGDGAATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 496
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 497 KMDKASILGDTIEYVKQLRRRI 518
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 201 ATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 256
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 14 GNKKKKSSGSKSN--PMKL---------STDPQSVAARQRRHRISDRFKILQSMVPGGTK 62
G +K+K S + N P ++ +TD S+A R RR +I+++ + LQ +VPG K
Sbjct: 119 GGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYK 178
Query: 63 -MDTASMLDEAINYVKFLKAVIWF 85
M A MLD INYV+ L+ I F
Sbjct: 179 TMGMAVMLDVIINYVQSLQNQIEF 202
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIWFHE 87
+ + +++ R+RR RI+++ + LQ +VP K D AS+LDEAI Y+K L+ ++W
Sbjct: 329 AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTT 388
Query: 88 NIINFADHHHHEHDPPVAFGQLPGSFP 114
I+ H+ PP+ G P
Sbjct: 389 GIVPMMFPGTHQLMPPMGMGLNTACMP 415
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
+ + SGSK + + +++ ++RR RI+++ K LQS++P K D ASMLDEAI Y
Sbjct: 95 RPRGGSGSKRT---RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEY 151
Query: 76 VKFLKAVIWF 85
+K L+ +
Sbjct: 152 LKQLQLQVQM 161
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 194 ATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 249
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 209 ATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEF 264
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 197 ATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 252
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E V + T+ + + +K+ G S+ + ++ ++RRH+I++R K LQ +VPG +
Sbjct: 148 EKVPSMTMTTTTDKEMRKTPGGGSSRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCS 207
Query: 62 KMDTASMLDEAINYVKFLK 80
K + AS LD+ I+Y+K L+
Sbjct: 208 KSNQASTLDQTIHYMKSLQ 226
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Query: 29 KLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ST +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 587 RVSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQ 645
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ + PG K + A +LDE INY++ L+ + F
Sbjct: 121 ATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEF 176
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 132 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 187
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 14 GNKKKKSSGSKSN--PMKL---------STDPQSVAARQRRHRISDRFKILQSMVPGGTK 62
G +K+K S + N P ++ +TD S+A R RR +I+++ + LQ +VPG K
Sbjct: 98 GGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYK 157
Query: 63 -MDTASMLDEAINYVKFLKAVIWF 85
M A MLD INYV+ L+ I F
Sbjct: 158 TMGMAVMLDVIINYVQSLQNQIEF 181
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +I++R K+LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 130 ATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 185
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 2 EYVNAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
E ++ K +G+G+ K+S + + + + R+RR RI+++ + LQ ++P
Sbjct: 4 ESIDTKKPVTGRGSTAKRSRAA---------EVHNQSERRRRDRINEKMRALQELIPNSN 54
Query: 62 KMDTASMLDEAINYVKFLK 80
K D ASML+EAI Y+K L+
Sbjct: 55 KTDKASMLEEAIEYLKMLQ 73
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 14 GNKKKKSSGSKSN--PMKL---------STDPQSVAARQRRHRISDRFKILQSMVPGGTK 62
G +K+K S + N P ++ +TD S+A R RR +I+++ + LQ +VPG K
Sbjct: 102 GGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYK 161
Query: 63 -MDTASMLDEAINYVKFLKAVIWF 85
M A MLD INYV+ L+ I F
Sbjct: 162 TMGMAVMLDVIINYVQSLQNQIEF 185
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 3 YVNAKTLASGKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGT 61
+++AK G G SS K+ P + +A R+RR ++++RF IL+S+VP T
Sbjct: 441 FLHAKNSNGGGGAATIPSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT 500
Query: 62 KMDTASMLDEAINYVKFLKAVI 83
KMD AS+L + I YVK L+ I
Sbjct: 501 KMDKASILGDTIEYVKQLRRRI 522
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 11 SGKGNKKKKSS----GSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTA 66
SG G K+ S GSK + S + +++ R+RR RI+++ + LQ ++P K+D A
Sbjct: 323 SGDGRKEAGPSRTGLGSKRS---RSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKA 379
Query: 67 SMLDEAINYVKFLKAVIWF 85
SMLDEAI Y+K L+ +
Sbjct: 380 SMLDEAIEYLKSLQLQVQI 398
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G ++ S G+K + + + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI
Sbjct: 371 GMRRSCSRGAKRS---RTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 427
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 428 EYLKTLQ 434
>gi|192766596|gb|ACF05947.1| MYC1 [Hevea brasiliensis]
Length = 476
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A RQRR R++ RF L+S+VP +KMD AS+L +A+ Y+K LKA +
Sbjct: 310 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKV 355
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+++ + LQ++VPG K M A MLDE INYV+ L+ + F
Sbjct: 163 ATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEF 218
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS + K LQ +VPG K+ A MLDE INYV+ L+ + F
Sbjct: 197 ATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 252
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G ++ S G+K + + + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI
Sbjct: 168 GMRRSCSRGAKRS---RTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 224
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 225 EYLKTLQ 231
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++ R+RR +I+ R +IL+ ++P K D ASMLD+AI Y+K LK I
Sbjct: 757 NLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQI 804
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR RI+ + K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQV 300
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S+ + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 108 RRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 167
Query: 79 LK 80
L+
Sbjct: 168 LQ 169
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G + + SGSK + + + +++ ++RR +I+++ K LQS++P K D ASMLDEAI
Sbjct: 90 GARPRGGSGSKRS---RAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAI 146
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 147 EYLKQLQ 153
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+
Sbjct: 395 ATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQ 445
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+
Sbjct: 462 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ 505
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+ + +
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQY 180
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G + + SGSK + + + +++ ++RR +I+++ K LQS++P K D ASMLDEAI
Sbjct: 90 GARPRGGSGSKRS---RAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAI 146
Query: 74 NYVKFLK 80
Y+K L+
Sbjct: 147 EYLKQLQ 153
>gi|334200172|gb|AEG74013.1| lMYC3 [Hevea brasiliensis]
Length = 475
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A RQRR R++ RF L+S+VP +KMD AS+L +A+ Y+K LKA +
Sbjct: 304 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKV 349
>gi|356565449|ref|XP_003550952.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 324
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 17 KKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYV 76
KK ++ + NP + +A R+RR ++S RF L ++VPG KMD A++L++AI YV
Sbjct: 138 KKAAASTTRNPTQ--AQDHVIAERKRREKLSQRFIALSAIVPGLKKMDKATVLEDAIKYV 195
Query: 77 KFLK 80
K L+
Sbjct: 196 KQLQ 199
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWFHENIINFAD 94
Q AARQRR RIS++ L ++PG K++TA ML+EA +VK L+A + +
Sbjct: 155 QKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVLALMRAAGS 214
Query: 95 HHHHEHDPPVAFGQ 108
E P A Q
Sbjct: 215 SEMKEEKMPSAMAQ 228
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR RI+ + K LQ +VP +K D ASMLDE I+Y+K L+A +
Sbjct: 285 RKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQV 328
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 18 KKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVK 77
K G S+ + + +++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K
Sbjct: 146 KPGCGRSSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLK 205
Query: 78 FLKAVIWF 85
L+ +
Sbjct: 206 QLQLQVQM 213
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A MLD I+YV+ L+ I F
Sbjct: 111 ATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEF 166
>gi|329750801|gb|AEC03343.1| bHLH transcription factor MYC1 [Diospyros kaki]
Length = 719
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L++ I
Sbjct: 502 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRSKI 548
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A MLD I+YV+ L+ I F
Sbjct: 111 ATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEF 166
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +IS+R K LQ +VPG K+ A MLDE INYV+ L+
Sbjct: 8 ATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQ 58
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+ R RR +IS+R K+LQ++VPG K+ A MLDE INYV+ L+
Sbjct: 139 ATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQ 189
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella
moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella
moellendorffii]
Length = 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ R+RR RI+++ + LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 24 LSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQ 67
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQ 402
>gi|255555757|ref|XP_002518914.1| DNA binding protein, putative [Ricinus communis]
gi|223541901|gb|EEF43447.1| DNA binding protein, putative [Ricinus communis]
Length = 479
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A RQRR R+++RF L+S+VP +KMD AS+L +A+ Y++ LKA +
Sbjct: 309 AERQRRERLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELKAKV 354
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R + L+ +VPG K M A MLDE INYV+ L+ + F
Sbjct: 155 ATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 210
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR +I+ R K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 336
>gi|386307235|gb|AFJ05597.1| bHLH1 protein [Salvia miltiorrhiza]
Length = 332
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 36 SVAARQRRHRISDRFKILQSMVP-GGTKMDTASMLDEAINYVKFLKAVIWFHENIINFAD 94
SV ++RR +I++RF+IL+ ++P K DTAS L E I YV++L+ + +E +I+ +
Sbjct: 51 SVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGVISTLE 110
Query: 95 HHHHEHD 101
H+ D
Sbjct: 111 FRAHKAD 117
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
++ ++RR RI+++ K LQS++P K D ASMLDEAI Y+K L+ +
Sbjct: 169 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQV 215
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+
Sbjct: 168 NLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQ 212
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 7 KTLASGKGNKKKKSSGSKSNPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMD 64
K +AS N ++ KS K PQ S++ R+RR +I+ + + LQ+++P K+D
Sbjct: 355 KEMASPSENADEEEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVD 414
Query: 65 TASMLDEAINYVKFLK 80
ASMLD+AI Y+K L+
Sbjct: 415 KASMLDKAIEYLKTLQ 430
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 35/45 (77%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ ++RR RI+++ K LQ+++P +K D ASMLDEAI Y+K L+
Sbjct: 144 NLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQ 188
>gi|255559476|ref|XP_002520758.1| conserved hypothetical protein [Ricinus communis]
gi|223540143|gb|EEF41720.1| conserved hypothetical protein [Ricinus communis]
Length = 668
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 483 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 529
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 13 KGNKKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDTA 66
+G++KK+++ S +ST AA R+RR +I+ R K LQ +VP K D A
Sbjct: 275 EGDRKKENAKSS-----VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKA 329
Query: 67 SMLDEAINYVKFLKAVI 83
SMLDE I Y+K L+A +
Sbjct: 330 SMLDEVIEYLKQLQAQV 346
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 10 ASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASML 69
A G + + S+GSK N S + S++ ++RR RI+ + + LQ ++P K+D S+L
Sbjct: 366 AEGAMSTRGGSAGSKRN---RSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISIL 422
Query: 70 DEAINYVKFLK 80
DEAI+Y+K L+
Sbjct: 423 DEAIDYLKTLQ 433
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 13 KGNKKKKSSGSKSNPMKLSTDPQSVAA------RQRRHRISDRFKILQSMVPGGTKMDTA 66
+G++KK+++ S +ST AA R+RR +I+ R K LQ +VP K D A
Sbjct: 275 EGDRKKENAKSS-----VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKA 329
Query: 67 SMLDEAINYVKFLKAVI 83
SMLDE I Y+K L+A +
Sbjct: 330 SMLDEVIEYLKQLQAQV 346
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKM-DTASMLDEAINYVKFLKAVIWF 85
+T+ S+A R RR +IS+R ++LQ + PG K+ A MLDE INYV+ L+ + F
Sbjct: 213 ATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEF 268
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR +I+ R K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 335
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 35 QSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
Q+ AARQRR RIS++ L ++PG K++TA ML+EA +VK L+A +
Sbjct: 159 QNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQV 207
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+ +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 398
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I++R K LQ +VPG K M A MLD I+YV+ L+ I F
Sbjct: 54 ATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEF 109
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ R+RR RI+++ K LQ ++P TK D SMLDEAI+Y+K L+
Sbjct: 27 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQ 69
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHEN 88
+T P+S+A R RR RISDR K LQ + P K TA MLD A+ Y+K L+ + +
Sbjct: 325 FATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQVQILTD 384
Query: 89 IINFADHHHHE--HDPPVA 105
+ HE H P +
Sbjct: 385 CKDKCKCASHEKKHCKPCS 403
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHEN 88
+T P+S+A R RR RISDR K LQ + P K TA MLD A+ Y+K L+ + +
Sbjct: 328 FATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQVQILTD 387
Query: 89 IINFADHHHHE--HDPPVA 105
+ HE H P +
Sbjct: 388 CKDKCKCASHEKKHCKPCS 406
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+ R K+LQ +VPG +K+ TA +LDE IN+V+ L+ + F
Sbjct: 14 ATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQREVEF 69
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+
Sbjct: 411 NLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQ 455
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLK 80
+T P+S+A R+RR RIS R K LQ +VP K +T+ MLD A++Y+K LK
Sbjct: 287 CATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 338
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S+ + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 324 RRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 383
Query: 79 LK 80
L+
Sbjct: 384 LQ 385
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLK 80
+T P+S+A R+RR RIS R K LQ +VP K +T+ MLD A++Y+K LK
Sbjct: 286 CATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 337
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+++ + LQ++VPG K M A MLDE INYV+ L+ + F
Sbjct: 164 ATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEF 219
>gi|324022722|gb|ADY15317.1| transparent testa 8 [Prunus avium]
Length = 565
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 423 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 469
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKI 512
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 23 SKSNPMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
++ P K++T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y
Sbjct: 319 ARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 378
Query: 76 VKFLK 80
+K L+
Sbjct: 379 LKSLQ 383
>gi|389827986|gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]
Length = 697
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 523
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ ++PG K + A +LDE INY++ L+ + F
Sbjct: 147 ATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEF 202
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 12 GKGNKKKKSSG-SKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLD 70
G G+ SS K+ P + +A R+RR ++++RF IL+S+VP TKMD AS+L
Sbjct: 462 GSGDATIPSSKLCKAAPQEEPNANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILG 521
Query: 71 EAINYVKFLKAVI 83
+ I YVK L+ I
Sbjct: 522 DTIEYVKQLRRRI 534
>gi|356503537|ref|XP_003520564.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 577
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R RR ++++RF IL+SMVP T+MD AS+L + I Y+K L+
Sbjct: 420 MAERHRREKLNERFLILRSMVPSVTRMDKASILGDTIEYIKQLR 463
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 7/58 (12%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-------MDTASMLDEAINYVKFLK 80
+T P+S+A R RR RIS+R + LQ +VP K +T+ MLDEA+ Y+KFL+
Sbjct: 422 CATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQ 479
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
+++ ++RR RI+++ K LQS++P K D ASMLDEAI Y+K L+ +
Sbjct: 182 NLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 231
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRI 512
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRI 521
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 23 SKSNPMKLSTDPQSVAA-------RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
++ P K++T +S AA R+RR RI+++ + LQ ++P K D ASMLDEAI Y
Sbjct: 319 ARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 378
Query: 76 VKFLK 80
+K L+
Sbjct: 379 LKSLQ 383
>gi|356502813|ref|XP_003520210.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 646
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 458 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKI 504
>gi|302398605|gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica]
Length = 709
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
N+ G+G+ + + K P + +A R+RR ++++RF IL+S+VP TKMD
Sbjct: 455 NSPKFQEGEGSTRLR----KGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMD 510
Query: 65 TASMLDEAINYVKFLKAVI 83
AS+L + I YVK L+ I
Sbjct: 511 KASILGDTIEYVKQLRNKI 529
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 163 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
Length = 702
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 480 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 526
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
+++ ++RR RI+++ K LQS++P K D ASMLDEAI Y+K L+ +
Sbjct: 203 NLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 252
>gi|338192055|gb|AEI84807.1| bHLH transcription factor [Malus x domestica]
Length = 709
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 5 NAKTLASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMD 64
N+ G+G+ + + K P + +A R+RR ++++RF IL+S+VP TKMD
Sbjct: 455 NSPKFQEGEGSTRLR----KGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMD 510
Query: 65 TASMLDEAINYVKFLKAVI 83
AS+L + I YVK L+ I
Sbjct: 511 KASILGDTIEYVKQLRNKI 529
>gi|225438169|ref|XP_002262764.1| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
Length = 358
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G++ K+ S + NP L+ VA R+RR +++ RF L ++VPG K D S+L EA+
Sbjct: 163 GDRTKRVSSTTRNP--LNNHDHVVAERKRREKLTQRFIALSALVPGLRKTDKVSVLGEAV 220
Query: 74 NYVKFLKAVIWFHE 87
Y+K L+ + E
Sbjct: 221 KYLKQLQERVKMLE 234
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLKAVIWF 85
+TDP S+A R RR +IS R K+LQS+VPG K+ A +LDE I +V L+ + F
Sbjct: 171 ATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVLSLQNQVEF 226
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS R K LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 165 ATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 220
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S+ + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 324 RRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 383
Query: 79 LK 80
L+
Sbjct: 384 LQ 385
>gi|296088946|emb|CBI38512.3| unnamed protein product [Vitis vinifera]
Length = 334
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G++ K+ S + NP L+ VA R+RR +++ RF L ++VPG K D S+L EA+
Sbjct: 139 GDRTKRVSSTTRNP--LNNHDHVVAERKRREKLTQRFIALSALVPGLRKTDKVSVLGEAV 196
Query: 74 NYVKFLKAVIWFHE 87
Y+K L+ + E
Sbjct: 197 KYLKQLQERVKMLE 210
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRI 523
>gi|184161316|gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
Length = 701
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 497 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 543
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 484 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRI 530
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R KILQ +VPG K + A +LD INYV+ L+ + F
Sbjct: 106 ATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEF 161
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ R+RR RI+++ K LQ ++P TK D SMLDEAI+Y+K L+
Sbjct: 25 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQ 67
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR +I+++ + L+ ++P KMD ASMLD+AI+Y+K LK
Sbjct: 214 NLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLK 258
>gi|441433511|gb|AGC31677.1| basic helix loop helix [Solanum tuberosum]
Length = 689
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+
Sbjct: 497 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 540
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 40 RQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
R+RR +I+ R K LQ +VP +K D ASMLDE I Y+K L+A +
Sbjct: 38 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 81
>gi|163311836|gb|ABY26931.1| putative anthocyanin transcriptional regulator [Ipomoea quamoclit]
Length = 659
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 464 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRI 510
>gi|168008699|ref|XP_001757044.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691915|gb|EDQ78275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 187
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ G++S LS + VA R+RR ++++R L+++VP TKMD AS+L +AI YVK
Sbjct: 17 EKGGTRSTRRHLSKNL--VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKE 74
Query: 79 L-KAVIWFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPESLYSSIN 125
L + V HE ++ D+ ++ + F + P + P+ L IN
Sbjct: 75 LQQQVKELHEELV---DNKDNDMTGTLGFDEEPVTADQEPK-LGCGIN 118
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ + +++ R+RR RI+++ + LQ ++P K+D ASMLDEAI Y+K L+
Sbjct: 5 AAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ 54
>gi|10998404|gb|AAG25927.1|AF260918_1 anthocyanin 1 [Petunia x hybrida]
gi|10998406|gb|AAG25928.1|AF260919_1 anthocyanin 1 [Petunia x hybrida]
Length = 668
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+
Sbjct: 478 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 521
>gi|225436998|ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
Length = 696
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 492 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 538
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLK 80
+T P+S+A R RR RIS+R K LQ +VP K +T+ MLDE + YVK L+
Sbjct: 9 CATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+ + K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 75 ATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEF 130
>gi|296086734|emb|CBI32369.3| unnamed protein product [Vitis vinifera]
Length = 620
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 416 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 462
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR +I+++ + L+ ++P KMD ASMLD+AI+Y+K LK
Sbjct: 214 NLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLK 258
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 22 GSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
GS + + +T+ +++ R+RR RI+ + + LQ ++P K+D ASML EAI+Y+K L+
Sbjct: 373 GSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQ 431
>gi|332801231|gb|AEE99257.1| anthocyanin 1a [Nicotiana tabacum]
Length = 671
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+
Sbjct: 478 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 521
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 22 GSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
GS + + +T+ +++ R+RR RI+ + + LQ ++P K+D ASML EAI+Y+K L+
Sbjct: 367 GSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQ 425
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S D + + R+RR RI+++ + LQ ++P TK D SMLDEAI+Y+K L+
Sbjct: 21 SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQ 70
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+ +
Sbjct: 118 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 166
>gi|147772652|emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
Length = 668
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+ I
Sbjct: 464 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 510
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 20/102 (19%)
Query: 4 VNAKTLASGKGNKKKKSSGS----KSNPMK---------------LSTDPQSVAARQRRH 44
VN+ S GNK K SSG K+N + +TD +++A R RR
Sbjct: 114 VNSTPKVSESGNKFKHSSGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRG 173
Query: 45 RISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+I+++ + LQ++VPG K M A MLDE INYV+ L+ + F
Sbjct: 174 KINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 215
>gi|332801235|gb|AEE99259.1| anthocyanin 1-like protein [Nicotiana sylvestris]
Length = 671
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+
Sbjct: 478 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 521
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K + A +LDE INY++ L + F
Sbjct: 119 ATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEF 174
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S+ + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 203 RRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 262
Query: 79 LK 80
L+
Sbjct: 263 LQ 264
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+ + K+LQ +VPG K + A MLDE INYV+ L+ + F
Sbjct: 184 ATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEF 239
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK--------A 81
+TD S+A R RR RIS + K+LQS+VPG ++ A +LDE I YV+ LK
Sbjct: 84 ATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDRIGSLEAE 143
Query: 82 VIWFHENIIN 91
++ +E +IN
Sbjct: 144 LVLVNEMVIN 153
>gi|27650307|emb|CAD54298.1| bHLH transcription factor [Brassica napus]
Length = 564
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 16 KKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINY 75
K KK +G + L A R+RR +++DR L+S+VP TK+D AS+L +AINY
Sbjct: 297 KCKKKTGKHTQAKNLH------AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINY 350
Query: 76 VKFLK 80
VK L+
Sbjct: 351 VKELQ 355
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLK 80
+T P+S+A R+RR RIS R K LQ +VP K +T+ MLD A+ Y+K LK
Sbjct: 158 CATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELK 209
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+S+VP TKMD AS+L + I YVK L+
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 518
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFL----KAVIW 84
+T P+S+A R RR RIS+R + LQ +VP K +TA MLD A++Y+K L K +
Sbjct: 313 CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINE 372
Query: 85 FHENIINFADHHHHEH 100
+ A HH+
Sbjct: 373 SRASCTCSASKQHHQQ 388
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 16/119 (13%)
Query: 26 NPMKLSTDPQ--SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
N +K S +P+ +++ ++RR +I+ + + L+ ++P K+D ASMLD+AI+Y+K LK +
Sbjct: 330 NRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQL 389
Query: 84 WFHENIINFADHHHHEHDPPVAFGQLPGSFPYSPES---------LYSSINNLAAAPVP 133
+ I++ P+ G P P P S ++ S N + P+P
Sbjct: 390 QANFQIMSMGSGLW-----PLMMGFRPPQLPIPPLSAITDNRLIQMFGSPNQIPPMPMP 443
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
+++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+ +
Sbjct: 150 NLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 199
>gi|3757520|gb|AAC64222.1| bHLH transcription factor [Arabidopsis thaliana]
Length = 467
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR +++DR L+S+VP TK+D AS+L +AINYVK L+
Sbjct: 213 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQ 256
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 181 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 224
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK---AVIW 84
++ R+RR RI+++ + LQ +VP K D ASMLDEAI Y+K L+ V+W
Sbjct: 244 LSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQVMW 294
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
+++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+ +
Sbjct: 146 NLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 195
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Query: 23 SKSNPMKL------STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINY 75
S S PMK+ +T P+S+A R RR +IS+R + LQ +VP K +TA MLD A++Y
Sbjct: 325 SDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDY 384
Query: 76 VKFLK 80
+K L+
Sbjct: 385 IKDLQ 389
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 181 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 224
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+ +
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 180
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 129 NLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 173
>gi|224066515|ref|XP_002302118.1| predicted protein [Populus trichocarpa]
gi|222843844|gb|EEE81391.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 15 NKKKKSSGSKSNPMKLSTDPQS-------VAARQRRHRISDRFKILQSMVPGGTKMDTAS 67
N K G +N + T PQ +A R+RR ++++RF IL+S+VP TKMD AS
Sbjct: 435 NSPKSRDGDATNKFRKGT-PQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKAS 493
Query: 68 MLDEAINYVKFL 79
+L + I YVK L
Sbjct: 494 ILGDTIEYVKQL 505
>gi|28375728|dbj|BAC56998.1| F3G1 [Perilla frutescens]
Length = 519
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
+A R+RR +++ RF +L+SMVP TKMD AS+L + I+Y+K LK I
Sbjct: 366 MAERRRREKLNQRFIVLRSMVPFITKMDKASILADTIDYLKQLKKRI 412
>gi|334200174|gb|AEG74014.1| lMYC4 [Hevea brasiliensis]
Length = 470
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVI 83
A RQRR R++ RF L+S+VP +KMD AS+L +A+ Y++ LKA +
Sbjct: 304 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIEELKAKV 349
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 9 LASGKGNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASM 68
L S K +SS +S + +++ ++RR +I+++ K LQ+++P K D ASM
Sbjct: 74 LPSSKAAPPPRSSSKRSRAAEF----HNLSEKRRRSKINEKLKALQNLIPNSNKTDKASM 129
Query: 69 LDEAINYVKFLKAVI 83
LDEAI Y+K L+ +
Sbjct: 130 LDEAIEYLKQLQLQV 144
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +I+ R K+LQ +VPG K+ TA +LDE IN+V+ L+
Sbjct: 180 ATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQ 230
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWFHENI 89
+T P+S+A R RR +IS+R K LQ +VP + +TA MLD+A+ YVK L+ + N
Sbjct: 386 ATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQVQELTNT 445
Query: 90 I 90
+
Sbjct: 446 V 446
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ ++RR RI+++ K LQS++P K D ASMLDEAI Y+K L+
Sbjct: 203 NLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 247
>gi|22325727|ref|NP_179283.2| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
gi|218563495|sp|Q9ZVX2.2|AMS_ARATH RecName: Full=Transcription factor ABORTED MICROSPORES; AltName:
Full=Basic helix-loop-helix protein 21; Short=AtbHLH21;
Short=bHLH 21; AltName: Full=Transcription factor EN 48;
AltName: Full=bHLH transcription factor bHLH021
gi|330251459|gb|AEC06553.1| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
Length = 571
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR +++DR L+S+VP TK+D AS+L +AINYVK L+
Sbjct: 317 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQ 360
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S D + + R+RR RI+++ + LQ ++P TK D SMLDEAI+Y+K L+
Sbjct: 20 SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQ 69
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKAVIWF 85
++ ++RR RI+++ K LQS++P +K D ASMLD+AI Y+K L+ +
Sbjct: 39 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQM 87
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+++ + LQ +VPG K M A ML+E INYV L+ + F
Sbjct: 156 ATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVEF 211
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFL-KAVIWFHE 87
+T P+S+A R RR RIS+R + LQ +VP K +TA MLD A++Y+K L K V ++
Sbjct: 75 CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLND 134
Query: 88 NIINFADHHHHEH 100
+ N H+
Sbjct: 135 SRANCTCSAKHQQ 147
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 317 RRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 376
Query: 79 LK 80
L+
Sbjct: 377 LQ 378
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 313 RRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 372
Query: 79 LK 80
L+
Sbjct: 373 LQ 374
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 19 KSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKF 78
+ S ++S + + +++ R+RR RI+++ + LQ ++P K+D ASML+EAI Y+K
Sbjct: 313 RRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 372
Query: 79 LK 80
L+
Sbjct: 373 LQ 374
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +I+++ + LQ +VPG K M A ML+E INYV L+ + F
Sbjct: 165 ATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQVEF 220
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMD-TASMLDEAINYVKFLK 80
+TD S+A R RR +I+ R K+LQ +VPG K+ TA +LDE IN+V+ L+
Sbjct: 213 ATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQ 263
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 30 LSTDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVI 83
+T P+S+A R+RR RIS R + LQ +VP K +T+ MLD A++Y+K L+ I
Sbjct: 301 CATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQI 355
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ R+RR RI+++ K LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 320 NLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQ 364
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD S+A R RR +IS+R K LQ +VPG K + A +LDE INY++ L+ F
Sbjct: 140 ATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEF 195
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 194 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 237
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 36 SVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+++ ++RR RI+++ K LQS+VP +K D ASMLD+AI Y+K L+
Sbjct: 71 NLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQ 115
>gi|451953544|dbj|BAM84241.1| bHLH transcription factor [Dahlia pinnata]
Length = 658
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+++VP TKMD AS+L + I YVK L+
Sbjct: 489 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLR 532
>gi|357517063|ref|XP_003628820.1| Transcription factor MYC2 [Medicago truncatula]
gi|355522842|gb|AET03296.1| Transcription factor MYC2 [Medicago truncatula]
Length = 648
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 34/44 (77%)
Query: 38 AARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLKA 81
A RQRR +++ +F L+++VP G+KMD AS+L +AI+Y+ LK+
Sbjct: 466 AERQRREKLNQKFYALRAVVPNGSKMDKASLLGDAISYINELKS 509
>gi|451953538|dbj|BAM84238.1| bHLH transcription factor [Dahlia pinnata]
Length = 652
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+++VP TKMD AS+L + I YVK L+
Sbjct: 483 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLR 526
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%)
Query: 14 GNKKKKSSGSKSNPMKLSTDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAI 73
G+ + + +G + + +++ ++RR +I+++ K LQS+VP +K D ASMLD+AI
Sbjct: 34 GSSESEPAGRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAI 93
Query: 74 NYVKFLKAVI 83
Y+K L+ +
Sbjct: 94 EYLKHLQLQV 103
>gi|297832282|ref|XP_002884023.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata]
gi|297329863|gb|EFH60282.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata]
Length = 571
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR +++DR L+S+VP TK+D AS+L +AINYVK L+
Sbjct: 317 MAERRRRKKLNDRLYKLRSLVPTITKLDRASILGDAINYVKELQ 360
>gi|357117240|ref|XP_003560380.1| PREDICTED: transcription factor bHLH25-like [Brachypodium
distachyon]
Length = 349
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++S+RF L +VPG KMD AS+L +AI YVK L+
Sbjct: 170 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQ 213
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTK-MDTASMLDEAINYVKFLKAVIWF 85
+TD ++A R RR +I+++ + LQ++VPG K M A MLDE INYV+ L+ + F
Sbjct: 158 ATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVEF 213
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 31 STDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
S + +++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 197 SAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 246
>gi|312222653|dbj|BAJ33515.1| bHLH transcriptional factor [Dahlia pinnata]
gi|312222663|dbj|BAJ33520.1| bHLH transcriptional factor [Dahlia pinnata]
Length = 649
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+++VP TKMD AS+L + I YVK L+
Sbjct: 480 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLR 523
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 23 SKSNPMKLS--TDPQSVAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+ NP K S + +++ ++RR RI+++ K LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 137 TSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 196
Query: 81 AVI 83
+
Sbjct: 197 LQV 199
>gi|451953542|dbj|BAM84240.1| bHLH transcription factor [Dahlia pinnata]
Length = 649
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+++VP TKMD AS+L + I YVK L+
Sbjct: 480 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLR 523
>gi|451953540|dbj|BAM84239.1| bHLH transcription factor [Dahlia pinnata]
Length = 651
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 37 VAARQRRHRISDRFKILQSMVPGGTKMDTASMLDEAINYVKFLK 80
+A R+RR ++++RF IL+++VP TKMD AS+L + I YVK L+
Sbjct: 482 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLR 525
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,694,729,091
Number of Sequences: 23463169
Number of extensions: 100938220
Number of successful extensions: 349375
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2550
Number of HSP's successfully gapped in prelim test: 522
Number of HSP's that attempted gapping in prelim test: 345980
Number of HSP's gapped (non-prelim): 3287
length of query: 169
length of database: 8,064,228,071
effective HSP length: 129
effective length of query: 40
effective length of database: 9,332,446,566
effective search space: 373297862640
effective search space used: 373297862640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)