BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039980
MDGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECL
SLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIA
AVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG

High Scoring Gene Products

Symbol, full name Information P value
AT3G63320 protein from Arabidopsis thaliana 2.6e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039980
        (165 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077319 - symbol:AT3G63320 species:3702 "Arabi...   135  2.6e-08   1


>TAIR|locus:2077319 [details] [associations]
            symbol:AT3G63320 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004722 "protein
            serine/threonine phosphatase activity" evidence=ISS]
            InterPro:IPR001932 Pfam:PF00481 PROSITE:PS01032 SMART:SM00332
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008152
            GO:GO:0004721 eggNOG:COG0631 Gene3D:3.60.40.10 SUPFAM:SSF81606
            EMBL:AL138648 InterPro:IPR015655 PANTHER:PTHR13832 IPI:IPI00516896
            PIR:T48121 RefSeq:NP_191891.1 UniGene:At.54046
            ProteinModelPortal:Q9M1V8 SMR:Q9M1V8 EnsemblPlants:AT3G63320.1
            GeneID:825507 KEGG:ath:AT3G63320 TAIR:At3g63320
            HOGENOM:HOG000115316 InParanoid:Q9M1V8 OMA:GGNTRRI PhylomeDB:Q9M1V8
            ProtClustDB:CLSN2914714 Genevestigator:Q9M1V8 Uniprot:Q9M1V8
        Length = 423

 Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)

Query:   113 KEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
             K+V +GIAAVFDGH GSEASEMAS LLL+YF LH
Sbjct:    63 KDVLVGIAAVFDGHSGSEASEMASQLLLDYFALH 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       165   0.00093  107 3  11 22  0.36    32
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  151 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.46u 0.10s 14.56t   Elapsed:  00:00:01
  Total cpu time:  14.46u 0.10s 14.56t   Elapsed:  00:00:01
  Start:  Thu May  9 21:03:29 2013   End:  Thu May  9 21:03:30 2013

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