Query 039985
Match_columns 357
No_of_seqs 428 out of 3228
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:47:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7b_A Euchromatic histone-lys 100.0 3.1E-33 1.1E-37 249.6 24.6 201 96-320 6-222 (237)
2 2xai_A ASB-9, ankyrin repeat a 100.0 1E-33 3.4E-38 257.7 20.2 194 100-318 2-209 (261)
3 1oy3_D Transcription factor in 100.0 7.9E-34 2.7E-38 259.3 18.4 207 97-321 5-271 (282)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 8.4E-34 2.9E-38 256.9 17.4 202 96-320 5-235 (253)
5 3aji_A 26S proteasome non-ATPa 100.0 1.3E-32 4.6E-37 244.5 22.7 200 99-321 4-218 (231)
6 3d9h_A CDNA FLJ77766, highly s 100.0 7.7E-33 2.6E-37 255.4 21.7 198 96-318 54-265 (285)
7 1k1a_A B-cell lymphoma 3-encod 100.0 9.3E-33 3.2E-37 246.7 21.3 199 97-319 5-227 (241)
8 1wdy_A 2-5A-dependent ribonucl 100.0 3.5E-32 1.2E-36 248.0 25.4 196 101-319 39-264 (285)
9 2dzn_A Probable 26S proteasome 100.0 8.1E-33 2.8E-37 245.2 20.2 198 101-318 2-218 (228)
10 1n11_A Ankyrin; clathrin, BAND 100.0 5.7E-33 2E-37 270.4 20.8 199 97-319 175-388 (437)
11 4gpm_A Engineered protein OR26 100.0 2E-32 6.7E-37 233.8 19.7 143 103-268 6-148 (169)
12 4b93_B Ankyrin repeat domain-c 100.0 3E-33 1E-37 256.4 15.2 150 95-267 80-229 (269)
13 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-32 4.8E-37 250.1 19.0 190 101-318 36-248 (261)
14 3utm_A Tankyrase-1; tankyrase, 100.0 8.2E-32 2.8E-36 253.1 23.9 206 98-324 55-329 (351)
15 2f8y_A Notch homolog 1, transl 100.0 1.8E-32 6.3E-37 242.3 18.1 179 98-319 22-202 (223)
16 1n11_A Ankyrin; clathrin, BAND 100.0 1.6E-32 5.3E-37 267.3 18.5 198 98-319 143-355 (437)
17 2rfa_A Transient receptor pote 100.0 1.2E-31 4.2E-36 238.7 21.5 186 100-319 2-208 (232)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 8.3E-32 2.8E-36 243.7 19.0 172 101-295 57-243 (253)
19 1s70_B 130 kDa myosin-binding 100.0 2.3E-32 8E-37 252.3 15.6 207 100-325 39-282 (299)
20 3ljn_A Hypothetical protein; a 100.0 1E-31 3.4E-36 255.6 16.2 197 97-319 16-255 (364)
21 3aji_A 26S proteasome non-ATPa 100.0 8.9E-31 3E-35 232.7 21.1 168 101-291 40-221 (231)
22 1oy3_D Transcription factor in 100.0 4.2E-31 1.4E-35 241.2 19.1 168 101-284 45-267 (282)
23 4b93_B Ankyrin repeat domain-c 100.0 6.5E-32 2.2E-36 247.5 13.4 162 101-285 52-228 (269)
24 3eu9_A Huntingtin-interacting 100.0 2.1E-30 7E-35 230.6 22.7 200 97-319 5-221 (240)
25 3hra_A Ankyrin repeat family p 100.0 2.5E-30 8.6E-35 224.9 21.7 185 99-319 3-189 (201)
26 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-31 8.1E-36 237.8 15.2 185 95-316 39-227 (236)
27 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-30 3.6E-35 233.3 18.9 172 101-295 46-236 (241)
28 2dzn_A Probable 26S proteasome 100.0 2.3E-30 8E-35 229.3 19.8 149 101-270 36-188 (228)
29 3b7b_A Euchromatic histone-lys 100.0 2.2E-30 7.5E-35 231.1 19.6 211 11-268 10-222 (237)
30 3v30_A DNA-binding protein rfx 100.0 1.7E-30 5.9E-35 220.9 17.9 146 101-268 2-147 (172)
31 2fo1_E LIN-12 protein; beta-ba 100.0 4.4E-31 1.5E-35 252.8 15.8 197 99-319 123-357 (373)
32 2rfa_A Transient receptor pote 100.0 6.3E-30 2.2E-34 227.5 21.6 158 101-269 37-210 (232)
33 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-29 3.9E-34 238.9 24.2 199 101-319 59-284 (337)
34 2etb_A Transient receptor pote 100.0 4.4E-31 1.5E-35 238.9 13.8 196 100-319 1-232 (256)
35 2f8y_A Notch homolog 1, transl 100.0 1.5E-29 5.1E-34 223.6 22.9 149 99-269 56-204 (223)
36 2rfm_A Putative ankyrin repeat 100.0 3.5E-30 1.2E-34 223.0 18.4 150 97-269 31-180 (192)
37 3v31_A Ankyrin repeat family A 100.0 3.7E-30 1.3E-34 217.8 17.6 147 100-269 2-148 (167)
38 1wdy_A 2-5A-dependent ribonucl 100.0 4.6E-30 1.6E-34 233.9 19.6 195 101-319 5-230 (285)
39 1ikn_D Protein (I-kappa-B-alph 100.0 2.1E-31 7.1E-36 238.1 10.2 186 98-319 5-195 (236)
40 3kea_A K1L; tropism, ANK repea 100.0 4.9E-30 1.7E-34 236.7 19.4 142 101-269 31-174 (285)
41 4gpm_A Engineered protein OR26 100.0 4.8E-30 1.6E-34 219.0 17.5 128 101-251 37-164 (169)
42 3ljn_A Hypothetical protein; a 100.0 2.9E-30 1E-34 245.5 17.5 184 101-297 53-266 (364)
43 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.4E-30 1.9E-34 217.6 16.7 149 98-269 11-159 (169)
44 3d9h_A CDNA FLJ77766, highly s 100.0 8.1E-30 2.8E-34 235.1 18.8 168 101-295 92-273 (285)
45 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-30 4.4E-35 249.6 13.9 184 94-296 159-367 (373)
46 3utm_A Tankyrase-1; tankyrase, 100.0 1.8E-29 6.3E-34 237.0 20.6 198 99-319 22-291 (351)
47 3hra_A Ankyrin repeat family p 100.0 5.4E-29 1.9E-33 216.4 20.7 146 101-269 39-191 (201)
48 2pnn_A Transient receptor pote 100.0 3.5E-30 1.2E-34 235.3 13.1 204 97-319 9-244 (273)
49 1awc_B Protein (GA binding pro 100.0 1.9E-29 6.6E-34 210.5 16.4 144 102-269 3-146 (153)
50 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-29 4.4E-34 238.5 15.9 255 26-295 34-321 (337)
51 2etb_A Transient receptor pote 100.0 1.6E-29 5.4E-34 228.6 14.7 160 101-269 43-234 (256)
52 3kea_A K1L; tropism, ANK repea 100.0 3.1E-29 1.1E-33 231.3 16.9 198 27-270 10-209 (285)
53 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.3E-29 7.9E-34 211.5 14.5 145 101-269 5-150 (162)
54 1s70_B 130 kDa myosin-binding 100.0 1.3E-29 4.3E-34 234.0 13.2 174 101-295 73-284 (299)
55 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.9E-29 1.3E-33 208.9 14.9 144 101-269 2-146 (156)
56 1sw6_A Regulatory protein SWI6 100.0 9.3E-30 3.2E-34 239.4 12.4 196 103-317 99-325 (327)
57 4hbd_A KN motif and ankyrin re 100.0 5.5E-29 1.9E-33 228.6 17.2 150 98-269 108-263 (276)
58 3jxi_A Vanilloid receptor-rela 100.0 1.6E-29 5.5E-34 228.9 13.0 197 99-319 3-236 (260)
59 3eu9_A Huntingtin-interacting 100.0 2E-28 6.7E-33 217.7 19.8 172 101-295 42-230 (240)
60 3f6q_A Integrin-linked protein 100.0 1E-28 3.4E-33 211.6 16.0 148 99-268 3-150 (179)
61 3twr_A Tankyrase-2; ankyrin re 100.0 3.9E-29 1.3E-33 211.0 11.6 147 99-268 6-152 (165)
62 1sw6_A Regulatory protein SWI6 100.0 2.4E-29 8.1E-34 236.7 10.5 147 101-267 131-327 (327)
63 3jxi_A Vanilloid receptor-rela 100.0 1.2E-28 4.2E-33 223.1 13.3 162 99-269 44-238 (260)
64 2pnn_A Transient receptor pote 100.0 4.1E-28 1.4E-32 221.6 16.4 162 98-268 51-245 (273)
65 2vge_A RELA-associated inhibit 100.0 1.3E-29 4.3E-34 226.8 4.7 145 100-267 20-167 (229)
66 4hbd_A KN motif and ankyrin re 100.0 3.3E-28 1.1E-32 223.4 13.6 178 101-319 76-261 (276)
67 3v30_A DNA-binding protein rfx 100.0 1.8E-27 6.3E-32 202.1 16.3 136 101-259 36-171 (172)
68 1bi7_B P16INK4A, MTS1, multipl 100.0 2.9E-28 1E-32 204.3 10.8 142 98-263 9-151 (156)
69 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.9E-28 1.3E-32 218.1 10.7 147 100-270 4-153 (239)
70 2rfm_A Putative ankyrin repeat 99.9 1.1E-26 3.8E-31 200.9 17.0 150 134-319 28-178 (192)
71 1awc_B Protein (GA binding pro 99.9 2.9E-26 9.7E-31 191.2 16.7 119 101-237 34-152 (153)
72 3v31_A Ankyrin repeat family A 99.9 5.2E-26 1.8E-30 192.2 18.3 151 140-326 2-154 (167)
73 1d9s_A Cyclin-dependent kinase 99.9 8.6E-27 3E-31 190.8 13.1 127 95-240 6-133 (136)
74 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.5E-26 1.9E-30 192.8 17.1 121 101-239 47-167 (169)
75 1ihb_A P18-INK4C(INK6), cyclin 99.9 3E-26 1E-30 192.3 15.2 122 101-240 38-159 (162)
76 3t8k_A Uncharacterized protein 99.9 1.9E-27 6.5E-32 206.0 8.0 146 101-269 6-167 (186)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.2E-27 1.1E-31 212.1 7.2 146 100-268 36-193 (239)
78 2jab_A H10-2-G3; HER2, darpin, 99.9 3.4E-26 1.2E-30 187.2 12.7 124 98-239 11-134 (136)
79 3twr_A Tankyrase-2; ankyrin re 99.9 5.5E-26 1.9E-30 191.6 13.8 152 137-324 4-157 (165)
80 3f6q_A Integrin-linked protein 99.9 9.6E-26 3.3E-30 193.0 14.5 133 101-256 39-171 (179)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.8E-25 1.3E-29 177.1 15.7 123 100-240 1-123 (126)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 6.6E-26 2.3E-30 189.9 11.5 143 135-314 6-150 (156)
83 1d9s_A Cyclin-dependent kinase 99.9 3.2E-25 1.1E-29 181.4 11.6 118 134-268 5-123 (136)
84 2b0o_E UPLC1; arfgap, structur 99.9 2E-25 6.7E-30 207.7 11.5 140 101-269 151-299 (301)
85 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-24 5.5E-29 180.7 15.3 123 98-240 33-155 (156)
86 3ui2_A Signal recognition part 99.9 1.4E-26 4.7E-31 208.8 2.8 166 101-296 15-181 (244)
87 3deo_A Signal recognition part 99.9 4.7E-25 1.6E-29 189.7 11.2 139 137-295 40-179 (183)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.4E-24 4.8E-29 177.6 12.0 117 137-269 10-126 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.9 7.6E-25 2.6E-29 179.1 10.3 117 136-268 5-121 (137)
90 3c5r_A BARD-1, BRCA1-associate 99.9 4.8E-25 1.6E-29 180.3 8.1 124 98-239 7-130 (137)
91 3aaa_C Myotrophin, protein V-1 99.9 9.6E-25 3.3E-29 175.3 9.0 113 99-229 5-117 (123)
92 2aja_A Ankyrin repeat family p 99.9 5.5E-26 1.9E-30 217.6 1.8 145 101-270 92-239 (376)
93 3aaa_C Myotrophin, protein V-1 99.9 4E-24 1.4E-28 171.6 12.2 113 138-266 4-116 (123)
94 3ehr_A Osteoclast-stimulating 99.9 1.3E-24 4.5E-29 192.3 9.3 121 101-239 73-194 (222)
95 3ui2_A Signal recognition part 99.9 2.6E-24 8.8E-29 193.9 10.4 129 100-269 44-173 (244)
96 3t8k_A Uncharacterized protein 99.9 1.6E-24 5.5E-29 187.5 8.5 121 101-239 38-175 (186)
97 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2E-23 6.8E-28 166.9 14.2 114 140-269 1-114 (126)
98 2vge_A RELA-associated inhibit 99.9 3.9E-24 1.3E-28 191.1 10.5 134 117-270 1-137 (229)
99 3deo_A Signal recognition part 99.9 5.5E-24 1.9E-28 183.0 11.0 128 100-268 43-171 (183)
100 3ehr_A Osteoclast-stimulating 99.9 9.5E-24 3.3E-28 186.8 9.0 118 135-268 67-185 (222)
101 3jue_A Arfgap with coiled-coil 99.9 5.6E-23 1.9E-27 196.1 13.1 149 100-268 198-349 (368)
102 3lvq_E ARF-GAP with SH3 domain 99.9 1.6E-22 5.5E-27 200.6 14.0 135 102-265 133-276 (497)
103 1dcq_A PYK2-associated protein 99.9 9.1E-23 3.1E-27 187.5 11.2 127 102-240 131-260 (278)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.6E-21 5.5E-26 148.6 12.0 90 140-240 1-90 (93)
105 2l6b_A NR1C; ankyrin, consensu 99.9 5.9E-22 2E-26 156.8 8.3 107 137-259 5-111 (115)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-21 1E-25 147.1 11.9 92 101-207 2-93 (93)
107 2b0o_E UPLC1; arfgap, structur 99.9 2.5E-21 8.4E-26 180.0 13.2 115 145-268 154-271 (301)
108 3jue_A Arfgap with coiled-coil 99.9 5.3E-21 1.8E-25 182.5 15.3 145 140-318 198-347 (368)
109 2aja_A Ankyrin repeat family p 99.8 2.1E-22 7.3E-27 192.7 3.7 169 102-295 66-245 (376)
110 3lvq_E ARF-GAP with SH3 domain 99.8 2.1E-20 7E-25 185.5 15.2 116 145-269 135-253 (497)
111 1dcq_A PYK2-associated protein 99.8 4.1E-20 1.4E-24 169.8 14.8 162 98-269 63-251 (278)
112 2l6b_A NR1C; ankyrin, consensu 99.8 8E-21 2.7E-25 150.3 8.4 108 97-222 5-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.8E-19 9.7E-24 140.7 10.1 93 134-237 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 6.4E-18 2.2E-22 132.8 10.2 91 96-201 19-109 (110)
115 1gp8_A Protein (scaffolding pr 25.3 50 0.0017 19.7 2.3 18 185-202 16-33 (40)
116 3mkq_B Coatomer subunit alpha; 21.5 3.3E+02 0.011 22.1 10.2 23 221-243 121-143 (177)
No 1
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.1e-33 Score=249.60 Aligned_cols=201 Identities=13% Similarity=0.114 Sum_probs=179.7
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~------ 71 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-------IDTCSEDQRT-PLMEAAENNHLEAVKYLIKAGALVD------ 71 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCCC------
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-------cCccCCCCCC-HHHHHHHhCCHHHHHHHHhCCCCCC------
Confidence 3455699999999999999999999999988 7778999999 9999999999999999999999887
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhC-CCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQH-PQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
.++..|.||||+|+..|+.+++++|++++ .++. ..|..|+||||+|+..|+.+++++|++ .+.+++.+|.
T Consensus 72 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~ 142 (237)
T 3b7b_A 72 -PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN---CQDDGGWTPMIWATEYKHVDLVKLLLS-----KGSDINIRDN 142 (237)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCT
T ss_pred -CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc---cCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCccCC
Confidence 55666999999999999999999999999 5555 899999999999999999999999998 6789999999
Q ss_pred CCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC-cccccccccCCCCHHHHHhhhh
Q 039985 255 KGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.|.||||+|+..|+.+. ...+.|||++|...+..+.++.++.. .+.+.+|++|+ ||+++|....
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~-t~l~~A~~~~ 221 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGE-TPLQCASLNS 221 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC-CHHHHSCTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCC-CHHHHHHHHH
Confidence 99999999999998551 23456999999999999988888854 58889999999 9999998655
Q ss_pred H
Q 039985 320 E 320 (357)
Q Consensus 320 ~ 320 (357)
+
T Consensus 222 ~ 222 (237)
T 3b7b_A 222 Q 222 (237)
T ss_dssp H
T ss_pred H
Confidence 4
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=257.69 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=173.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|+||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~ 66 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-------VNIITADHVS-PLHEACLGGHLSCVKILLKHGAQVN-------GVT 66 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-------SSCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CCC
Confidence 389999999999999999999999988 7788999999 9999999999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|+++. . +.+|+||||+|+..|+.+++++|++ .+.+++.+|..|.||
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~-~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~ 137 (261)
T 2xai_A 67 ADWHTPLFNACVSGSWDCVNLLLQHGASVQ---P-ESDLASPIHEAARRGHVECVNSLIA-----YGGNIDHKISHLGTP 137 (261)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---C-SCTTCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCBTTTBCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---C-CCCCCCHHHHHHHcCcHHHHHHHHH-----cCCCCCcCCCCCCCH
Confidence 679999999999999999999999999987 3 5569999999999999999999998 678999999999999
Q ss_pred HHHHHHcCCCC-------------CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhh
Q 039985 260 LHHVADMKHYK-------------EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 260 Lh~Aa~~g~~~-------------~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
||+|+..|+.+ ....+.|||++|...+..+.++.++. +.+.+.+|.+|+ ||++++...
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~-tpl~~A~~~ 209 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGK-RPVELVPPE 209 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC-CGGGGSCTT
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-Chhhhcccc
Confidence 99999999855 22345599999999999988888884 458899999999 999999743
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.9e-34 Score=259.32 Aligned_cols=207 Identities=13% Similarity=0.032 Sum_probs=163.9
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+||..|+.+++++|++.++.. . ..+..+..|.| |||+|+..|+.++|++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~---~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~------- 72 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGH-E---YLDLQNDLGQT-ALHLAAILGEASTVEKLYAAGAGVL------- 72 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS-G---GGGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSS-------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-c---cccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------
Confidence 3456999999999999999999999987751 0 14568899999 9999999999999999999999987
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc--------------------------------------------ccc
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAI--------------------------------------------LLD 212 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~--------------------------------------------~~~ 212 (357)
.++..|+||||+|+..|+.+++++|++++++.. .++
T Consensus 73 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T 1oy3_D 73 VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE 152 (282)
T ss_dssp CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTT
T ss_pred CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCC
Confidence 556679999999999999999999999887621 013
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC-CCcHHHHHHHcCCCCC--------------CCCCCC
Q 039985 213 NLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK-GYTLLHHVADMKHYKE--------------GTRPGP 277 (357)
Q Consensus 213 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~-G~TpLh~Aa~~g~~~~--------------~~~~~t 277 (357)
.+|..|+||||+|+..|+.+++++|++ .+.+++.++.. |+||||+|+..|+.+. ...+.|
T Consensus 153 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 227 (282)
T 1oy3_D 153 AENYDGHTPLHVAVIHKDAEMVRLLRD-----AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227 (282)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Confidence 778999999999999999999999998 67889999854 9999999999998551 234559
Q ss_pred hhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHH
Q 039985 278 VLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHED 321 (357)
Q Consensus 278 ~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~ 321 (357)
||++|...+..+.++.|+. +.+.+.+|.+|. ||++.+......
T Consensus 228 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-tpl~~a~~~~~~ 271 (282)
T 1oy3_D 228 PLGSALLRPNPILARLLRAHGAPEPEDGGDKL-SPCSSSGSDSDS 271 (282)
T ss_dssp HHHHHHTSSCHHHHHHHHHTTCCCCCCC-----------------
T ss_pred HHHHHHHcCCcHHHHHHHHcCCCcCcCCCccc-ccccccCCcccc
Confidence 9999999999888888884 458899999999 999999765543
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.4e-34 Score=256.85 Aligned_cols=202 Identities=12% Similarity=0.130 Sum_probs=150.1
Q ss_pred CCCCCCCCHHHHHHhcC-------------CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHH
Q 039985 96 TTSPANISTISLGLGKG-------------NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFV 162 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g-------------~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll 162 (357)
..+..|.||||+|+..| +.++++.|++.+++ .....|..|.| |||+|+..|+.++|++|+
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~------~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGAS------LHNQTDRTGET-ALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp -----------------------------------------------------CCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCC------cccccCCCCCc-HHHHHHHcCCHHHHHHHH
Confidence 34556999999999988 89999999999987 12345899999 999999999999999999
Q ss_pred HcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCC-CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhh
Q 039985 163 KKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHP-QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEM 241 (357)
Q Consensus 163 ~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~-~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 241 (357)
++|++++ .+|..|+||||+|+..|+.+++++|+++++ ++. .+|..|+||||+|+..|+.+++++|++
T Consensus 78 ~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-- 145 (253)
T 1yyh_A 78 EASADAN-------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD---ARMHDGTTPLILAARLAVEGMLEDLIN-- 145 (253)
T ss_dssp HTTCCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT---CCCTTCCCHHHHHHHHTCSSHHHHHHH--
T ss_pred HcCCCCC-------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc---ccCCCCCcHHHHHHHcChHHHHHHHHH--
Confidence 9999987 566679999999999999999999999998 555 899999999999999999999999998
Q ss_pred ccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC-ccccccccc
Q 039985 242 QLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEK 306 (357)
Q Consensus 242 ~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~ 306 (357)
.+.+++.+|..|+||||+|+..|+.+. ...+.|||++|...+..+.++.++.. .+.+.+|..
T Consensus 146 ---~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 222 (253)
T 1yyh_A 146 ---SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222 (253)
T ss_dssp ---TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ---cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccC
Confidence 678999999999999999999998551 23456999999999999999888854 588899999
Q ss_pred CCCCHHHHHhhhhH
Q 039985 307 NKMTASDLFNLTHE 320 (357)
Q Consensus 307 g~~Tp~dl~~~~~~ 320 (357)
|+ ||+++|.+...
T Consensus 223 g~-tpl~~A~~~g~ 235 (253)
T 1yyh_A 223 DR-LPRDIAQERMH 235 (253)
T ss_dssp CC-CHHHHHHHTTC
T ss_pred CC-CHHHHHHHcCC
Confidence 99 99999976443
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-32 Score=244.52 Aligned_cols=200 Identities=16% Similarity=0.102 Sum_probs=176.2
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..+.+|||.|+..|+.+.++.|++.++.. .+..+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~ 69 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSL------ATRTDQDSRT-ALHWACSAGHTEIVEFLLQLGVPVN-------DK 69 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGG------GGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSC-------CC
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhh------hhcCCCCCCC-HHHHHHHcCcHHHHHHHHHhCCCCC-------Cc
Confidence 34789999999999999999999987751 4567899999 9999999999999999999999887 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.|
T Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t 141 (231)
T 3aji_A 70 DDAGWSPLHIAASAGXDEIVKALLVKGAHVN---AVNQNGCTPLHYAASKNRHEIAVMLLE-----GGANPDAKDHYDAT 141 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCC
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCc
Confidence 6669999999999999999999999999998 899999999999999999999999988 67889999999999
Q ss_pred HHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHH
Q 039985 259 LLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHED 321 (357)
Q Consensus 259 pLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~ 321 (357)
|||+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+.+|..|+ ||+++|...+..
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-t~l~~A~~~~~~ 218 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK-TPLQVAKGGLGL 218 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC-CHHHHSCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHhhHHH
Confidence 9999999998551 2345599999999999888888884 457889999999 999999765543
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.7e-33 Score=255.38 Aligned_cols=198 Identities=11% Similarity=0.025 Sum_probs=177.5
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~------ 119 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-------VNIITADHVS-PLHEACLGGHLSCVKILLKHGAQVN------ 119 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-------SCEECTTCCC-HHHHHHHTTCHHHHHHHHHTTCCSS------
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHCCcHHHHHHHHHCCCCCC------
Confidence 3455699999999999999999999999988 7788999999 9999999999999999999999987
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.+|..|.||||+|+..|+.+++++|+++|+++. . +..|+||||+|+..|+.+++++|++ .+.+++.+|..
T Consensus 120 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~-~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~d~~ 189 (285)
T 3d9h_A 120 -GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ---P-ESDLASPIHEAARRGHVECVNSLIA-----YGGNIDHKISH 189 (285)
T ss_dssp -CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS---C-SCTTSCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCBTT
T ss_pred -CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC---C-CCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCC
Confidence 566679999999999999999999999999987 4 4459999999999999999999998 67899999999
Q ss_pred CCcHHHHHHHcCCCCC-------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhh
Q 039985 256 GYTLLHHVADMKHYKE-------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 256 G~TpLh~Aa~~g~~~~-------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
|.||||+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+.+|.+|+ ||+++|...
T Consensus 190 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~-t~l~~A~~~ 265 (285)
T 3d9h_A 190 LGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGK-RPVELVPPE 265 (285)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CGGGGSCTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHHHHhcCc
Confidence 9999999999998551 2344599999999999988888884 458899999999 999999843
No 7
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=9.3e-33 Score=246.66 Aligned_cols=199 Identities=14% Similarity=0.103 Sum_probs=175.1
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHh----cCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVD----FSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP 172 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~----~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~ 172 (357)
.+..|.||||+||..|+.++++.|++ .+.. .+..|..|.| |||+|+..|+.+++++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~--- 73 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-------LDIYNNLRQT-PLHLAVITTLPSVVRLLVTAGASPM--- 73 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT---
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-------CCcccccCCC-HHHHHHHcCCHHHHHHHHHcCCCcc---
Confidence 34569999999999999999999997 4555 6678899999 9999999999999999999999987
Q ss_pred CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCC----CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 173 NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHP----QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 173 ~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~----~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
.++..|.||||+|+..|+.+++++|+++++ ++. ..|..|+||||+|+..|+.+++++|++ .+.+
T Consensus 74 ----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~ 141 (241)
T 1k1a_A 74 ----ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE---ARNYDGLTALHVAVNTECQETVQLLLE-----RGAD 141 (241)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCC
T ss_pred ----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc---ccCcCCCcHHHHHHHcCCHHHHHHHHH-----cCCC
Confidence 556669999999999999999999999998 665 889999999999999999999999998 6788
Q ss_pred ccccc-CCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHH
Q 039985 249 ASRID-KKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTAS 312 (357)
Q Consensus 249 ~~~~d-~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~ 312 (357)
++.+| ..|.||||+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+.+|..|+ ||+
T Consensus 142 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-tpl 220 (241)
T 1k1a_A 142 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND-TPL 220 (241)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC-CTT
T ss_pred cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCC-CHH
Confidence 99888 889999999999998551 2345599999999999999998885 458889999999 999
Q ss_pred HHHhhhh
Q 039985 313 DLFNLTH 319 (357)
Q Consensus 313 dl~~~~~ 319 (357)
++|.+..
T Consensus 221 ~~A~~~~ 227 (241)
T 1k1a_A 221 MVARSRR 227 (241)
T ss_dssp TTCSSHH
T ss_pred HHHHhcC
Confidence 9997544
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-32 Score=248.00 Aligned_cols=196 Identities=15% Similarity=0.095 Sum_probs=176.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|+++|++++ .++.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 103 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGAD-------PVLRKKNGAT-PFLLAAIAGSVKLLKLFLSKGADVN-------ECDF 103 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CBCT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCc
Confidence 77999999999999999999999998 7778999999 9999999999999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCccccccc----------CCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNL----------NEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWAS 250 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~----------d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 250 (357)
.|.||||+|+..|+.+++++|+++|+++. .. +..|.||||+|+..|+.+++++|++. .+.+++
T Consensus 104 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~ 176 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALKFLYKRGANVN---LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE----MGADVN 176 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT----SCCCTT
T ss_pred ccCCHHHHHHHhCCHHHHHHHHHhCCCcc---cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh----cCCCCC
Confidence 79999999999999999999999999987 55 78899999999999999999999984 478999
Q ss_pred cccCCCCcHHHHHHHcCCCC------------------CCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCC
Q 039985 251 RIDKKGYTLLHHVADMKHYK------------------EGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMT 310 (357)
Q Consensus 251 ~~d~~G~TpLh~Aa~~g~~~------------------~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~T 310 (357)
.+|..|+||||+|+..++.. ....+.|||++|...+..+.++.++. +.+.+.+|.+|+ |
T Consensus 177 ~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~-t 255 (285)
T 1wdy_A 177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-T 255 (285)
T ss_dssp CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSC-C
T ss_pred ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCC-c
Confidence 99999999999999999832 12345599999999999999999985 347889999999 9
Q ss_pred HHHHHhhhh
Q 039985 311 ASDLFNLTH 319 (357)
Q Consensus 311 p~dl~~~~~ 319 (357)
|+++|....
T Consensus 256 ~l~~A~~~~ 264 (285)
T 1wdy_A 256 ALLLAVELK 264 (285)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999997643
No 9
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.1e-33 Score=245.21 Aligned_cols=198 Identities=15% Similarity=0.098 Sum_probs=171.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.++++.|++.++.. ....|..|.| |||+|+..|+.+++++|+++|++.+.. . .++.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~---~~~~ 70 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL------LLQKDQDGRI-PLHWSVSFQAHEITSFLLSKMENVNLD-D---YPDD 70 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTCTTCCGG-G---CCCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc------cccCCCCCCC-HHHHHHHcCCHHHHHHHHhcccccccc-c---cCCC
Confidence 789999999999999999999998871 2347899999 999999999999999999999544311 1 1455
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhC--CCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQH--PQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~--~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
.|.||||+|+..|+.+++++|+++| +++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|+|
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t 142 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLN---KITNQGVTCLHLAVGKKWFEVSQFLIE-----NGASVRIKDKFNQI 142 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcccc---cCCcCCCCHHHHHHHcCCHhHHHHHHH-----cCCCccccCCCCCC
Confidence 6999999999999999999999998 7777 889999999999999999999999998 67899999999999
Q ss_pred HHHHHHHcCCCCC---------------CCCCCChhHHHHHhhhHHHHHHhc-c-CcccccccccCCCCHHHHHhhh
Q 039985 259 LLHHVADMKHYKE---------------GTRPGPVLQFQEELQLFEHVKEIM-P-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 259 pLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~~~~v~~ll-~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
|||+|+..|+.+. ...+.|||++|...+..+.++.++ . +.+.+.+|.+|+ ||+++|.+.
T Consensus 143 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~-t~l~~A~~~ 218 (228)
T 2dzn_A 143 PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA-KAEDVALNE 218 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSC-BGGGGCSST
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC-cHHHHHHHH
Confidence 9999999997541 234559999999999999999888 3 458899999999 999999754
No 10
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.7e-33 Score=270.40 Aligned_cols=199 Identities=12% Similarity=0.091 Sum_probs=166.0
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+|+..|+.+++++|++.+.. ....+..|.| |||+|+..|+.+++++|++.|++++
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~------- 239 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-------PHSPAWNGYT-PLHIAAKQNQVEVARSLLQYGGSAN------- 239 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-------SCCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------
Confidence 344577777777777777777777777776 5566778888 8888888888888888888888766
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.++..|.||||+|+..|+.++|++|++++++.+ ..|..|+||||+|+..|+.+++++|++ .+.+++.+|..|
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g 311 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGN---LGNKSGLTPLHLVAQEGHVPVADVLIK-----HGVMVDATTRMG 311 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHH-----HTCCTTCCCSSC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHh-----CCccCCCCCCCC
Confidence 455568999999999999999999999999988 889999999999999999999999988 578899999999
Q ss_pred CcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 257 YTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+||||+|+..|+.+. ...+.|||++|...+..+.|+.|+. +.+.+.+|.+|+ ||+++|.+..
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~-t~l~~A~~~g 388 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT-TPLAIAKRLG 388 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC-CHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCC-CHHHHHHHcC
Confidence 999999999998652 2344599999999998888888884 458888999999 9999997644
No 11
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2e-32 Score=233.82 Aligned_cols=143 Identities=20% Similarity=0.242 Sum_probs=137.0
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
++|+.||+.|+.++|+.|++.+++ ++..|.+|.| |||+|+..++.+++++|+++|++++ .+|..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-------vn~~d~~g~t-~l~~a~~~~~~~~~~~ll~~gad~~-------~~d~~g 70 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-------VNASDSDGRT-PLHHAAENGHKEVVKLLISKGADVN-------AKDSDG 70 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHhcccchh-------hhccCC
Confidence 479999999999999999999998 7889999999 9999999999999999999999987 666679
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHH 262 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 262 (357)
+||||+||..|+.++|++|+++|++++ .+|.+|+||||+|+..|+.++|++|++ .+++++.+|.+|+||||+
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~gadvn---~~d~~G~TpLh~A~~~g~~~~v~~Ll~-----~gad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKGADVN---AKDSDGRTPLHHAAENGHKEVVKLLIS-----KGADVNTSDSDGRTPLDL 142 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHHHH
Confidence 999999999999999999999999998 999999999999999999999999998 788999999999999999
Q ss_pred HHHcCC
Q 039985 263 VADMKH 268 (357)
Q Consensus 263 Aa~~g~ 268 (357)
|++.|+
T Consensus 143 A~~~g~ 148 (169)
T 4gpm_A 143 AREHGN 148 (169)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 999997
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=256.42 Aligned_cols=150 Identities=16% Similarity=0.156 Sum_probs=129.2
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|.||||+|+..|+.+++++|++.+++ ....+..|.| |+|+|+..++.+++++|+++|++++
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-------~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~g~~~n----- 146 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-------AGARNADQAV-PLHLACQQGHFQVVKCLLDSNAKPN----- 146 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSC-----
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-------cCccCCCCCC-ccccccccChHHHHHHHHHCCCCCC-----
Confidence 34455688999999999999999999988887 6778888898 9999999999999999999988877
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
.+|..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+||.+|+.++|++|++ .|++++.+|.
T Consensus 147 --~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn---~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-----~Gad~~~~d~ 216 (269)
T 4b93_B 147 --KKDLSGNTPLIYACSGGHHELVALLLQHGASIN---ASNNKGNTALHEAVIEKHVFVVELLLL-----HGASVQVLNK 216 (269)
T ss_dssp --CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCT
T ss_pred --CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC---ccccCCCcHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCC
Confidence 556668999999999999999999999998888 888899999999999999999999987 6788889999
Q ss_pred CCCcHHHHHHHcC
Q 039985 255 KGYTLLHHVADMK 267 (357)
Q Consensus 255 ~G~TpLh~Aa~~g 267 (357)
+|+||||+|+++|
T Consensus 217 ~G~TpL~~A~~~~ 229 (269)
T 4b93_B 217 RQRTAVDCAEQNS 229 (269)
T ss_dssp TSCCSGGGSCTTC
T ss_pred CCCCHHHHHHhCC
Confidence 9999999988766
No 13
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=250.10 Aligned_cols=190 Identities=12% Similarity=0.031 Sum_probs=122.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++. +.
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~ 99 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGAQ-------VNGVTADWHT-PLFNACVSGSWDCVNLLLQHGASVQP--------ES 99 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSSC--------SC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCC--------CC
Confidence 55677777777777777777776666 5556666777 77777777777777777777666541 11
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+.+++. |..|+|||
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~-~~~g~t~L 170 (261)
T 2xai_A 100 DLASPIHEAARRGHVECVNSLIAYGGNID---HKISHLGTPLYLACENQQRACVKKLLE-----SGADVNQ-GKGQDSPL 170 (261)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCBTTTBCHHHHHHHTTCHHHHHHHHH-----HTCCTTC-CBTTBCHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCC---cCCCCCCCHHHHHHHhCCHHHHHHHHH-----cCCCCCC-CCCCCChH
Confidence 26677777777777777777777777666 666777777777777777777777766 3455553 66677777
Q ss_pred HHHHHcCCCC--------------CCCCCCChhHHHHHhhhHHHHHHhccC---------cccccccccCCCCHHHHHhh
Q 039985 261 HHVADMKHYK--------------EGTRPGPVLQFQEELQLFEHVKEIMPR---------HYAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 261 h~Aa~~g~~~--------------~~~~~~t~L~la~~l~~~~~v~~ll~~---------~~~~~~n~~g~~Tp~dl~~~ 317 (357)
|+|+..|+.+ .+..+.|||+++... ...++.++.. .....+|..|+ ||++++.+
T Consensus 171 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~l~~~~~~~~r~~~g~-t~l~~~~~ 247 (261)
T 2xai_A 171 HAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPSLMQLCRLRIRKCFGI-QQHHKITK 247 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCCHHHHHHHHHHTTSCT-TCGGGGGG
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCccHHHHHHHHHHHHhch-hccccCcc
Confidence 7777666643 123334677666532 2233333322 24567899999 99999875
Q ss_pred h
Q 039985 318 T 318 (357)
Q Consensus 318 ~ 318 (357)
.
T Consensus 248 ~ 248 (261)
T 2xai_A 248 L 248 (261)
T ss_dssp S
T ss_pred c
Confidence 3
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=8.2e-32 Score=253.09 Aligned_cols=206 Identities=16% Similarity=0.136 Sum_probs=178.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~iv~~Ll~~g~~~~-------~ 119 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGAD-------VHAKDKGGLV-PLHNACSYGHYEVTELLLKHGACVN-------A 119 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------C
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCccCCCCCc-HHHHHHHCCCHHHHHHHHHCCCCCC-------C
Confidence 44599999999999999999999999998 7788999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccc----------------------------------------------
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILL---------------------------------------------- 211 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~---------------------------------------------- 211 (357)
+|..|.||||+|+..|+.+++++|+++|+++...
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 199 (351)
T 3utm_A 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLA 199 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHH
Confidence 5666999999999999999999999999987610
Q ss_pred -----cccCCCCChHHHHHHHc---CCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCC------------
Q 039985 212 -----DNLNEKEQNILHVAVKR---RQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE------------ 271 (357)
Q Consensus 212 -----~~~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~------------ 271 (357)
...+..|+||||+|+.. +..+++++|++ .+.+++.+|.+|+||||+|+..|+.+.
T Consensus 200 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 200 LEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-----KGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274 (351)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-----cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 02346678999999999 55799999988 688999999999999999999998651
Q ss_pred --CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHHHHH
Q 039985 272 --GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHEDQLR 324 (357)
Q Consensus 272 --~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~~~~ 324 (357)
...+.|||++|...+..+.++.|+. +.+.+.+|.+|. ||++++.+...+.+.
T Consensus 275 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~-tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF-TAAQMGNEAVQQILS 329 (351)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHSCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC-ChhhhhhHHHHHHHH
Confidence 2345599999999999999998885 458899999999 999999665555444
No 15
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.8e-32 Score=242.31 Aligned_cols=179 Identities=16% Similarity=0.169 Sum_probs=159.6
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCcc
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKK 176 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~ 176 (357)
+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++++ +++
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~------- 86 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASAD-------ANIQDNMGRT-PLHAAVSADAQGVFQILIRNRATDLD------- 86 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHBTTSCTT-------
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCcc-------
Confidence 34588999999999999999999999988 7788999999 9999999999999999999987 444
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.++..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|
T Consensus 87 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g 158 (223)
T 2f8y_A 87 ARMHDGTTPLILAARLAVEGMLEDLINSHADVN---AVDDLGKSALHWAAAVNNVDAAVVLLK-----NGANKDMQNNRE 158 (223)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTC
T ss_pred cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc---CcCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCC
Confidence 455569999999999999999999999999998 999999999999999999999999998 678999999999
Q ss_pred CcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 257 YTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.||||+|+..|+. +.++.++. ..+.+.+|..|. ||+++|.+..
T Consensus 159 ~t~L~~A~~~~~~-------------------~~v~~Ll~~ga~~~~~~~~g~-t~l~~A~~~~ 202 (223)
T 2f8y_A 159 ETPLFLAAREGSY-------------------ETAKVLLDHFANRDITDHMDR-LPRDIAQERM 202 (223)
T ss_dssp CCHHHHHHHHTCH-------------------HHHHHHHHTTCCTTCCCTTCC-CHHHHHHHTT
T ss_pred cCHHHHHHHcCCH-------------------HHHHHHHHcCCCCccccccCC-CHHHHHHHhc
Confidence 9999999999973 34555553 347788999999 9999997544
No 16
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-32 Score=267.31 Aligned_cols=198 Identities=15% Similarity=0.135 Sum_probs=169.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|+++. .
T Consensus 143 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 207 (437)
T 1n11_A 143 TKKGFTPLHVAAKYGKVRVAELLLERDAH-------PNAAGKNGLT-PLHVAVHHNNLDIVKLLLPRGGSPH-------S 207 (437)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCSSCCC-HHHHHHHTTCHHHHHHHGGGTCCSC-------C
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCCC-------C
Confidence 34578888888888888888888888887 6677888999 9999999999999999999988876 4
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
++..|.||||+|+..|+.+++++|++.|++++ ..|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.
T Consensus 208 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~ 279 (437)
T 1n11_A 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN---AESVQGVTPLHLAAQEGHAEMVALLLS-----KQANGNLGNKSGL 279 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCTTCCCTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHh-----cCCCCCCCCCCCC
Confidence 55568999999999999999999999999888 889999999999999999999999987 6778899999999
Q ss_pred cHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 258 TLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 258 TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
||||+|+..|+.+. ...+.|||++|...+..+.|+.++. +.+.+.+|..|. ||+++|....
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~-t~L~~A~~~g 355 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY-SPLHQAAQQG 355 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHCC
Confidence 99999999998541 2345599999999999998988884 457888999999 9999997543
No 17
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.2e-31 Score=238.66 Aligned_cols=186 Identities=12% Similarity=0.079 Sum_probs=156.4
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhc-CcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDF-SAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~-~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.|.||||+|+..|+.++++.|++. +.+ .+..|..|.| |||+|+..|+.++|++|+++|+++...... .+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--~~ 71 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-------VHQRGAMGET-ALHIAALYDNLEAAMVLMEAAPELVFEPMT--SE 71 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCGGGGGCCCC--ST
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-------cccCCCCCCC-HHHHHHHcCCHHHHHHHHHcCchhcccccc--cc
Confidence 389999999999999999999998 776 6778999999 999999999999999999999986432221 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-------------CCChHHHHHHHcCCHHHHHHHHhhhccCC
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-------------KEQNILHVAVKRRQYKVFELITKEMQLSV 245 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-------------~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 245 (357)
|..|.||||+|+..|+.+++++|+++|+++. .++. .|+||||+|+..|+.+++++|++ .
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ 143 (232)
T 2rfa_A 72 LYEGQTALHIAVINQNVNLVRALLARGASVS---ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-----H 143 (232)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-----T
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHhCCCCCC---cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-----C
Confidence 6679999999999999999999999999988 5554 79999999999999999999998 6
Q ss_pred ccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc------ccccccCCCCHHHHHhhh
Q 039985 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA------MHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 246 ~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~------~~~n~~g~~Tp~dl~~~~ 318 (357)
+++++.+|.+|+||||+|+..|+.+ +.. ..++.++.. .+. +.+|..|. ||+++|...
T Consensus 144 ga~~~~~d~~g~t~L~~A~~~~~~~----------~~~-----~i~~~Ll~~g~~~~~~~~~~~~~~~g~-tpl~~A~~~ 207 (232)
T 2rfa_A 144 GADIRAQDSLGNTVLHILILQPNKT----------FAC-----QMYNLLLSYDGGDHLKSLELVPNNQGL-TPFKLAGVE 207 (232)
T ss_dssp TCCTTCCCTTSCCHHHHHHTCSCHH----------HHH-----HHHHHHHHTTCSCSSCCGGGCCCTTSC-CHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCChH----------HHH-----HHHHHHHhcCCchhhhhhhccCCCCCC-CHHHHHHHc
Confidence 8899999999999999999999732 111 112444422 233 57899999 999999754
Q ss_pred h
Q 039985 319 H 319 (357)
Q Consensus 319 ~ 319 (357)
.
T Consensus 208 g 208 (232)
T 2rfa_A 208 G 208 (232)
T ss_dssp T
T ss_pred C
Confidence 3
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=8.3e-32 Score=243.71 Aligned_cols=172 Identities=15% Similarity=0.155 Sum_probs=95.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~ 179 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++++ +++ .++
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~-------~~~ 121 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASAD-------ANIQDNMGRT-PLHAAVSADAQGVFQILIRNRATDLD-------ARM 121 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHSTTSCTT-------CCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCcc-------ccC
Confidence 44556666666666666666655555 4445555555 6666666666666666665554 332 333
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|+||
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~tp 193 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHADVN---AVDDLGKSALHWAAAVNNVDAAVVLLK-----NGANKDMQNNREETP 193 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCCTT---CBCTTSCBHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCH
Confidence 345566666666666666666666555555 555556666666666666666666655 445555555566666
Q ss_pred HHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 260 LHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 260 Lh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
||+|+..|+.+. +..+.||+++|...+..+.++.+.
T Consensus 194 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 666665555331 122335666655555555555444
No 19
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.98 E-value=2.3e-32 Score=252.30 Aligned_cols=207 Identities=15% Similarity=0.070 Sum_probs=175.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.||..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~ 103 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGAD-------INYANVDGLT-ALHQACIDDNVDMVKFLVENGANIN-------QPD 103 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCC-------TTCBCTTCCB-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CCC
Confidence 478999999999999999999999998 7788999999 9999999999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccC---------------
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS--------------- 244 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~--------------- 244 (357)
..|.||||+|+..|+.++|++|+++|+++. .+|..|.||||+|+..++.++++.|+...+.+
T Consensus 104 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 180 (299)
T 1s70_B 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVG---AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRD 180 (299)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHH
Confidence 679999999999999999999999999998 89999999999999999999999887653221
Q ss_pred -------CccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-Cccccc
Q 039985 245 -------VPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMH 302 (357)
Q Consensus 245 -------~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~ 302 (357)
........+..|.||||+|+..|+.+. ...+.|||++|...+..+.++.++. ..+.+.
T Consensus 181 ~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 181 ARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 011223466789999999999998551 2345599999999999988888885 458889
Q ss_pred ccccCCCCHHHHHhhhhHHHHHH
Q 039985 303 RDEKNKMTASDLFNLTHEDQLRK 325 (357)
Q Consensus 303 ~n~~g~~Tp~dl~~~~~~~~~~~ 325 (357)
+|..|+ ||+++|.+...+.+++
T Consensus 261 ~d~~g~-t~l~~A~~~~~~~l~~ 282 (299)
T 1s70_B 261 VNKVGQ-TAFDVADEDILGYLEE 282 (299)
T ss_dssp CCTTSC-CTTTSCCSGGGHHHHH
T ss_pred cCCCCC-CHHHHHHHHHHHHHHH
Confidence 999999 9999998765554443
No 20
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=1e-31 Score=255.63 Aligned_cols=197 Identities=11% Similarity=0.117 Sum_probs=175.2
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+||..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~------- 80 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVS-------PTIQNRFGCT-ALHLACKFGCVDTAKYLASVGEVHS------- 80 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHCCHHHHHHHHHHCCCCC-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------ccccCCCCCc-HHHHHHHcCCHHHHHHHHHCCCCcc-------
Confidence 345689999999999999999999999988 7789999999 9999999999999999999999654
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhh----CCCcccccc-----------------cCCCCChHHHHHHHcC--CHHH
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQ----HPQAILLDN-----------------LNEKEQNILHVAVKRR--QYKV 233 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~----~~~~~~~~~-----------------~d~~G~TpLh~A~~~g--~~~i 233 (357)
. ..|.||||+|+..|+.++|++|+++ +.++. . +|..|+||||+|+..| +.++
T Consensus 81 ~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~ 155 (364)
T 3ljn_A 81 L--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPE---SLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEM 155 (364)
T ss_dssp C--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHH---HHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHH
T ss_pred c--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHH---HHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHH
Confidence 1 2389999999999999999999999 77776 4 8889999999999999 9999
Q ss_pred HHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCC-------------------CCCCCChhHHHHHhhhHHHHHHh
Q 039985 234 FELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE-------------------GTRPGPVLQFQEELQLFEHVKEI 294 (357)
Q Consensus 234 v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~-------------------~~~~~t~L~la~~l~~~~~v~~l 294 (357)
|++|++ .+++++.+|..|.||||+|+..|+.+. ...+.|||++|...+..+.|+.|
T Consensus 156 v~~Ll~-----~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 230 (364)
T 3ljn_A 156 IKILVQ-----LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF 230 (364)
T ss_dssp HHHHHH-----HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred HHHHHH-----cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999998 578999999999999999999998541 12455999999999999999998
Q ss_pred ccC-cccccccccCCCCHHHHHhhhh
Q 039985 295 MPR-HYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 295 l~~-~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+.. .+.+.+|.+|. ||+++|....
T Consensus 231 l~~gad~~~~d~~g~-tpL~~A~~~g 255 (364)
T 3ljn_A 231 VEMGIDVNMEDNEHT-VPLYLSVRAA 255 (364)
T ss_dssp HTTTCCTTCCCTTSC-CHHHHHHHTC
T ss_pred HHcCCCCCCCCCCCC-CHHHHHHHhC
Confidence 854 58889999999 9999997543
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=8.9e-31 Score=232.70 Aligned_cols=168 Identities=15% Similarity=0.122 Sum_probs=141.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .++.
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 104 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVP-------VNDKDDAGWS-PLHIAASAGXDEIVKALLVKGAHVN-------AVNQ 104 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCC-------CCCcCCCCCC-HHHHHHHcCHHHHHHHHHHcCCCCC-------CCCC
Confidence 77899999999999999999998887 6778888999 9999999999999999999988876 5555
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|+|||
T Consensus 105 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L 176 (231)
T 3aji_A 105 NGCTPLHYAASKNRHEIAVMLLEGGANPD---AKDHYDATAMHRAAAKGNLKMVHILLF-----YKASTNIQDTEGNTPL 176 (231)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHcCCHHHHHHHHh-----cCCCccccCCCCCCHH
Confidence 68999999999999999999999998887 888899999999999999999999987 6778888999999999
Q ss_pred HHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHH
Q 039985 261 HHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHV 291 (357)
Q Consensus 261 h~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v 291 (357)
|+|+..|+.+. +..+.|||++|...+....+
T Consensus 177 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 177 HLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHH
Confidence 99999887541 23445899988765444433
No 22
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=4.2e-31 Score=241.22 Aligned_cols=168 Identities=14% Similarity=0.034 Sum_probs=137.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC--------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP-------- 172 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~-------- 172 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|++++++.....
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~t-pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAG-------VLVAERGGHT-ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------SSCCCTTSCC-HHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 88999999999999999999999998 7788999999 9999999999999999999887632110
Q ss_pred --------------------------------CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-CCC
Q 039985 173 --------------------------------NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQ 219 (357)
Q Consensus 173 --------------------------------~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-~G~ 219 (357)
...+.++..|.||||+|+..|+.++|++|+++|++++ .++. .|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~g~ 193 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN---KPEPTCGR 193 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTTCC
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCc
Confidence 0112456679999999999999999999999999998 6664 599
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHH
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEE 284 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~ 284 (357)
||||+|+..|+.++|++|++ .+++++.+|..|+||||+|+..|+.+. ...+.|||+.+..
T Consensus 194 tpL~~A~~~~~~~~v~~Ll~-----~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 194 TPLHLAVEAQAASVLELLLK-----AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred CHHHHHHHcCCHHHHHHHHH-----cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 99999999999999999998 688999999999999999999998551 2334488877654
No 23
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=6.5e-32 Score=247.53 Aligned_cols=162 Identities=15% Similarity=0.127 Sum_probs=128.6
Q ss_pred CCCHHHHHHhcCCH-HHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNM-LKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~-~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.||||.|+..++. .++++|++.|++ ++..|.+|.| |||+|+..|+.++|++|++.|++++ .++
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gad-------vn~~d~~G~T-pLh~A~~~g~~~~v~~Ll~~~a~~~-------~~~ 116 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLG-------VNVTSQDGSS-PLHVAALHGRADLIPLLLKHGANAG-------ARN 116 (269)
T ss_dssp -----------------------CCCC-------TTCCCTTSCC-HHHHHHHTTCTTHHHHHHHTTCCTT-------CCC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCcHHHHHHHHhcCCCcC-------ccC
Confidence 56899999988876 478999999998 7889999999 9999999999999999999999987 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+||..|+.++|++|++ .++++|.+|..|+||
T Consensus 117 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n---~~d~~g~TpL~~A~~~g~~~~v~~Ll~-----~gadvn~~~~~g~t~ 188 (269)
T 4b93_B 117 ADQAVPLHLACQQGHFQVVKCLLDSNAKPN---KKDLSGNTPLIYACSGGHHELVALLLQ-----HGASINASNNKGNTA 188 (269)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSC---CCCTTCCCHHHHHHHTTCGGGHHHHHH-----TTCCTTCBCTTSCBH
T ss_pred CCCCCccccccccChHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHH-----CCCCCCccccCCCcH
Confidence 669999999999999999999999999998 999999999999999999999999998 688999999999999
Q ss_pred HHHHHHcCCCCC--------------CCCCCChhHHHHHh
Q 039985 260 LHHVADMKHYKE--------------GTRPGPVLQFQEEL 285 (357)
Q Consensus 260 Lh~Aa~~g~~~~--------------~~~~~t~L~la~~l 285 (357)
||+|+..|+.+. +..+.|||++|..-
T Consensus 189 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 189 LHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 999999998651 34556999998653
No 24
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=230.58 Aligned_cols=200 Identities=12% Similarity=0.091 Sum_probs=176.9
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+.+|.|+||.|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|+++....
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---- 72 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD-------VRQPDKENVT-LLHWAAINNRIDLVKYYISKGAIVDQLG---- 72 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCB----
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC-------cCCCCCCCCC-HHHHHHHhCCHHHHHHHHHcCCcchhhc----
Confidence 345688999999999999999999999988 7778999999 9999999999999999999999876332
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
+..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|
T Consensus 73 --~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~Ll~-----~~~~~~~~~~~g 142 (240)
T 3eu9_A 73 --GDLNSTPLHWATRQGHLSMVVQLMKYGADPS---LIDGEGCSCIHLAAQFGHTSIVAYLIA-----KGQDVDMMDQNG 142 (240)
T ss_dssp --TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTS
T ss_pred --CCcCCChhHHHHHcCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCHHHHHHHHHh-----cCCCccccCCCC
Confidence 2338999999999999999999999999998 899999999999999999999999998 678999999999
Q ss_pred CcHHHHHHHcCCCC-C--------------CC-CCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 257 YTLLHHVADMKHYK-E--------------GT-RPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~-~--------------~~-~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.||||+|+..++.. . .. .+.|||++|...+..+.++.++. +.+.+.+|..|. ||+++|.+..
T Consensus 143 ~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~A~~~~ 221 (240)
T 3eu9_A 143 MTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGE-SALDLAKQRK 221 (240)
T ss_dssp CCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSC-BHHHHHHHTT
T ss_pred CcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-CHHHHHHHcC
Confidence 99999999887632 1 12 34599999999999999988884 457889999999 9999997643
No 25
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.5e-30 Score=224.89 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=158.9
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.++.||||.|+..|+.+.++.|++.+..+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 68 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQ------VDEVDTEGNT-PLNIAVHNNDIEIAKALIDRGADIN-------LQ 68 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCC------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CC
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCC------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CC
Confidence 35889999999999999999999988732 5668899999 9999999999999999999999987 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCC-CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHP-QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~-~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+..|.||||+|+..|+.+++++|++++. ++. ..|..|+||||+|+..|+.+++++|++. ...+++.+|..|+
T Consensus 69 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~~~g~ 141 (201)
T 3hra_A 69 NSISDSPYLYAGAQGRTEILAYMLKHATPDLN---KHNRYGGNALIPAAEKGHIDNVKLLLED----GREDIDFQNDFGY 141 (201)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT---CCCTTSCCSHHHHHHTTCHHHHHHHHHH----CCCCTTCCCTTSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCcccc---cccCCCCcHHHHHHHcCCHHHHHHHHHc----CCCCcCCCCCCCC
Confidence 6669999999999999999999995554 555 8999999999999999999999999984 3378999999999
Q ss_pred cHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 258 TLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 258 TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
||||+|+..++.. .++.+.++.++. +.+.+.+|.+|. ||+++|....
T Consensus 142 t~L~~A~~~~~~~--------------~~~~~~v~~Ll~~ga~~~~~~~~g~-t~l~~A~~~~ 189 (201)
T 3hra_A 142 TALIEAVGLREGN--------------QLYQDIVKLLMENGADQSIKDNSGR-TAMDYANQKG 189 (201)
T ss_dssp CHHHHHHHSSCCS--------------HHHHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHHT
T ss_pred CHHHHHHHhccch--------------hhHHHHHHHHHHCCCCCCccCCCCC-CHHHHHHHcC
Confidence 9999999998632 112445666663 457888999999 9999997543
No 26
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.4e-31 Score=237.77 Aligned_cols=185 Identities=13% Similarity=0.099 Sum_probs=157.0
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|++++++... ...
T Consensus 39 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~ 109 (236)
T 1ikn_D 39 NFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-------PELRDFRGNT-PLHLACEQGCLASVGVLTQSCTTPHL-HSI 109 (236)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-------SCCCCTTCCC-HHHHHHHHTCHHHHHHHHHSTTTTSS-SCG
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHhcccchhH-HHH
Confidence 33455699999999999999999999999988 7778999999 99999999999999999999876431 111
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-CCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
.+..+..|.||||+|+..|+.+++++|+++|++++ .+|. .|+||||+|+..|+.+++++|++ .+++++.+|
T Consensus 110 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~ 181 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN---AQEPCNGRTALHLAVDLQNPDLVSLLLK-----CGADVNRVT 181 (236)
T ss_dssp GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCSCCCC
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccc
Confidence 22566679999999999999999999999999998 8887 99999999999999999999988 688999999
Q ss_pred CCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccCc---ccccccccCCCCHHHHHh
Q 039985 254 KKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRH---YAMHRDEKNKMTASDLFN 316 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~~---~~~~~n~~g~~Tp~dl~~ 316 (357)
..|.||||+|+..|+. +.++.++... .....+.+|+ ||.+...
T Consensus 182 ~~g~tpl~~A~~~~~~-------------------~~~~~Ll~~ga~~~~~~~~~~~~-~~~~~~~ 227 (236)
T 1ikn_D 182 YQGYSPYQLTWGRPST-------------------RIQQQLGQLTLENLQMLPESEDE-ESYDTES 227 (236)
T ss_dssp TTCCCGGGGCTTSSCH-------------------HHHHHHHTTSCGGGSSCCCCCTT-TCCCCC-
T ss_pred CCCCCHHHHHHccCch-------------------HHHHHHHHcchhhhhcCCccchH-HHHhhhc
Confidence 9999999999999973 3455555332 2347888999 9987664
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.1e-30 Score=233.28 Aligned_cols=172 Identities=10% Similarity=0.101 Sum_probs=138.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC----CCCCCCCCcc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC----TIKGVPNHKK 176 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~----~~~~~~~~~~ 176 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|++.++ +++
T Consensus 46 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~------- 110 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVRLLVTAGAS-------PMALDRHGQT-AAHLACEHRSPTCLRALLDSAAPGTLDLE------- 110 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCTTSCCTT-------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------ccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcccccc-------
Confidence 77889999999999999998888887 6677888888 9999998888999999888887 333
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.++..|.||||+|+..|+.+++++|+++|+++. ..| ..|+||||+|+..|+.+++++|++ .+.+++.+|..
T Consensus 111 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~ 182 (241)
T 1k1a_A 111 ARNYDGLTALHVAVNTECQETVQLLLERGADID---AVDIKSGRSPLIHAVENNSLSMVQLLLQ-----HGANVNAQMYS 182 (241)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCBCTT
T ss_pred ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc---cccccCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCC
Confidence 455568899999998899999999988888887 666 788899999999889999988887 67788888888
Q ss_pred CCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 256 GYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 256 G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|+||||+|+..|+.+. +..+.|||++|...+..+.++.+.
T Consensus 183 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~ 236 (241)
T 1k1a_A 183 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236 (241)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhc
Confidence 8999999988887541 234458888887777777666554
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2.3e-30 Score=229.33 Aligned_cols=149 Identities=15% Similarity=0.075 Sum_probs=95.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhh-cCCCCCcHHHHHHHhcCcHHHHHHHHHcC--CCCCCCCCCccC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKD-CTNKGNMIKAKKFVDFSAAELVELFVKKD--CTIKGVPNHKKD 177 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~-~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g--~~~~~~~~~~~~ 177 (357)
|.||||+|+..|+.+++++|++.++. ..... .+..|.| |||+|+..|+.+++++|+++| ++++ .
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~~-------~ 102 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMEN-----VNLDDYPDDSGWT-PFHIACSVGNLEVVKSLYDRPLKPDLN-------K 102 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTT-----CCGGGCCCTTSCC-HHHHHHHHCCHHHHHHHHSSSSCCCTT-------C
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccc-----ccccccCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCcccc-------c
Confidence 55667777777777777777766632 00233 5566666 777777777777777777666 4443 3
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCc-cccccccCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVP-KWASRIDKKG 256 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~-~~~~~~d~~G 256 (357)
++..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+ .+++.+|..|
T Consensus 103 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~d~~g 174 (228)
T 2dzn_A 103 ITNQGVTCLHLAVGKKWFEVSQFLIENGASVR---IKDKFNQIPLHRAASVGSLKLIELLCG-----LGKSAVNWQDKQG 174 (228)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHTTCHHHHHHHHT-----TTCCCSCCCCTTS
T ss_pred CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHh-----cCcccccCcCCCC
Confidence 34446677777777777777777777666666 666667777777777777777777765 33 5666666677
Q ss_pred CcHHHHHHHcCCCC
Q 039985 257 YTLLHHVADMKHYK 270 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~ 270 (357)
+||||+|+..|+.+
T Consensus 175 ~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 175 WTPLFHALAEGHGD 188 (228)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 77777777666533
No 29
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.2e-30 Score=231.06 Aligned_cols=211 Identities=14% Similarity=0.145 Sum_probs=135.3
Q ss_pred ccchHHHHHHHhhhccccHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 11 EGRPAIKKIWMKKQMHKNANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIF 88 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (357)
.|++++-.-.. .+..++|+.|+++|.+ ..+.+|+||++.+...... +......+
T Consensus 10 ~g~t~L~~A~~-----~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~------------ 65 (237)
T 3b7b_A 10 NKRSPLHAAAE-----AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHL-------EAVKYLIK------------ 65 (237)
T ss_dssp CSCCHHHHHHH-----HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHT------------
T ss_pred CCCCHHHHHHH-----cCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCH-------HHHHHHHh------------
Confidence 46666654333 2346899999999887 6666777776644322210 00000000
Q ss_pred CCCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCC
Q 039985 89 SPDPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTI 168 (357)
Q Consensus 89 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~ 168 (357)
.....+..+..|.||||+|+..|+.+++++|++.++.+ .+..+..|.| |||+|+..|+.+++++|+++|+++
T Consensus 66 -~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~ 137 (237)
T 3b7b_A 66 -AGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMD------VNCQDDGGWT-PMIWATEYKHVDLVKLLLSKGSDI 137 (237)
T ss_dssp -TTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred -CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC------cccCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCC
Confidence 00111122334677777777777777777777776321 4456667777 777777777777777777777766
Q ss_pred CCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 169 KGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 169 ~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
+ .++..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++
T Consensus 138 ~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~gad 202 (237)
T 3b7b_A 138 N-------IRDNEENICLHWAAFSGCVDIAEILLAAKCDLH---AVNIHGDSPLHIAARENRYDCVVLFLS-----RDSD 202 (237)
T ss_dssp T-------CCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCC
T ss_pred C-------ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHhCCHhHHHHHHH-----cCCC
Confidence 5 444457777777777777777777777777776 677777777777777777777777766 5667
Q ss_pred cccccCCCCcHHHHHHHcCC
Q 039985 249 ASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 249 ~~~~d~~G~TpLh~Aa~~g~ 268 (357)
++.+|.+|+||||+|+..|+
T Consensus 203 ~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 203 VTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TTCCCTTSCCHHHHSCTTCH
T ss_pred CCccCCCCCCHHHHHHHHHH
Confidence 77777777777777777765
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.7e-30 Score=220.89 Aligned_cols=146 Identities=14% Similarity=0.080 Sum_probs=135.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.||||.|+..|+.++++.|++.++.. .+..|..|.| |||+|+..|+.++|++|+++|++++ .++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNL------VNKPDERGFT-PLIWASAFGEIETVRFLLEWGADPH-------ILAK 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGG------GGCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTT-------CCCT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccc------ccCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCch-------hhcc
Confidence 468999999999999999999998762 4567899999 9999999999999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|||
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l 139 (172)
T 3v30_A 68 ERESALSLASTGGYTDIVGLLLERDVDIN---IYDWNGGTPLLYAVRGNHVKCVEALLA-----RGADLTTEADSGYTPM 139 (172)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHH
T ss_pred cCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHH
Confidence 69999999999999999999999999998 999999999999999999999999998 6889999999999999
Q ss_pred HHHHHcCC
Q 039985 261 HHVADMKH 268 (357)
Q Consensus 261 h~Aa~~g~ 268 (357)
|+|+..|+
T Consensus 140 ~~A~~~~~ 147 (172)
T 3v30_A 140 DLAVALGY 147 (172)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCc
Confidence 99999997
No 31
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=4.4e-31 Score=252.83 Aligned_cols=197 Identities=16% Similarity=0.086 Sum_probs=171.8
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHH--------hcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLV--------DFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKG 170 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll--------~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~ 170 (357)
..|+||||+|+..|+.++++.|+ +.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-------vn~~d~~g~T-pL~~A~~~g~~~iv~~Ll~~ga~~~- 193 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-------VNAMDCDENT-PLMLAVLARRRRLVAYLMKAGADPT- 193 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSC-
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-------CcCCCCCCCC-HHHHHHHcChHHHHHHHHHCCCCCc-
Confidence 46999999999999998877776 67777 7778999999 9999999999999999999999987
Q ss_pred CCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhC---CCcccccccCCCCChHHHHHHHcC---CHHHHHHHHhhhccC
Q 039985 171 VPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQH---PQAILLDNLNEKEQNILHVAVKRR---QYKVFELITKEMQLS 244 (357)
Q Consensus 171 ~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~---~~~~~~~~~d~~G~TpLh~A~~~g---~~~iv~~Ll~~~~~~ 244 (357)
.+|..|.||||+|+..|+.+++++|++++ .++. ..|..|+||||+|+..+ +.+++++|++.
T Consensus 194 ------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~---- 260 (373)
T 2fo1_E 194 ------IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE---ELDRNGMTALMIVAHNEGRDQVASAKLLVEK---- 260 (373)
T ss_dssp ------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS---CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH----
T ss_pred ------ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh---hcCCCCCCHHHHHHHhCCcchHHHHHHHHHC----
Confidence 55666999999999999999999999988 6777 89999999999999998 89999999984
Q ss_pred Ccccccc--------ccCCCCcHHHHHHHcCCCCC---------------CCCCCChhHHHHHhhhHHHHHHhcc-Cccc
Q 039985 245 VPKWASR--------IDKKGYTLLHHVADMKHYKE---------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYA 300 (357)
Q Consensus 245 ~~~~~~~--------~d~~G~TpLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~ 300 (357)
+.+++. +|..|.||||+|+..|+.+. ...+.|||++|...+..+.|+.|+. +.+.
T Consensus 261 -g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 261 -GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp -TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred -CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 455554 78899999999999998541 2345599999999999999998885 4588
Q ss_pred ccccccCCCCHHHHHhhhh
Q 039985 301 MHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 301 ~~~n~~g~~Tp~dl~~~~~ 319 (357)
+.+|..|+ ||+++|....
T Consensus 340 ~~~d~~g~-t~l~~A~~~g 357 (373)
T 2fo1_E 340 EAVDATDH-TARQLAQANN 357 (373)
T ss_dssp SCCCSSSC-CHHHHHHHTT
T ss_pred cCCCCCCC-CHHHHHHHcC
Confidence 89999999 9999997643
No 32
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=6.3e-30 Score=227.54 Aligned_cols=158 Identities=13% Similarity=0.103 Sum_probs=134.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH------ 174 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~------ 174 (357)
|.||||+|+..|+.+++++|++.+++.... .....|..|.| |||+|+..|+.+++++|+++|++++.....
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELVFE--PMTSELYEGQT-ALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGC--CCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhccc--cccccCCCCcC-HHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeec
Confidence 779999999999999999999999871110 01456779999 999999999999999999999988732210
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHH----HHHHhhhccCCcccc-
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVF----ELITKEMQLSVPKWA- 249 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv----~~Ll~~~~~~~~~~~- 249 (357)
.+..+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++ ++|++ .+.+.
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~-----~g~~~~ 185 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR---AQDSLGNTVLHILILQPNKTFACQMYNLLLS-----YDGGDH 185 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH-----TTCSCS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCChHHHHHHHHHHHh-----cCCchh
Confidence 01223469999999999999999999999999998 9999999999999999999988 88887 44444
Q ss_pred -----ccccCCCCcHHHHHHHcCCC
Q 039985 250 -----SRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 250 -----~~~d~~G~TpLh~Aa~~g~~ 269 (357)
+.+|..|+||||+|+..|+.
T Consensus 186 ~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 186 LKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp SCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred hhhhhccCCCCCCCHHHHHHHcCCH
Confidence 68999999999999999973
No 33
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1.1e-29 Score=238.92 Aligned_cols=199 Identities=16% Similarity=0.117 Sum_probs=166.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|+||||+||..|+.++|++|++.++. .+..+..+.+ |++.++..+...++..+++.+++++ .+|.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~ 123 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGAD-------PVLRKKNGAT-PFILAAIAGSVKLLKLFLSKGADVN-------ECDF 123 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CBCT
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCc-------hhhhccCCCc-hhHHHHhcccchhhHHhhhccchhh-------hhcc
Confidence 77999999999999999999999998 7778888999 9999999999999999999988877 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccc-------cccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILL-------DNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~-------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
.|+||||+|+..|+.+++++|+++|+++... ...+..|+||||+|+.+|+.++|++||.+ .+++++.+|
T Consensus 124 ~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~----~gad~n~~d 199 (337)
T 4g8k_A 124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE----MGADVNACD 199 (337)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH----SCCCTTCCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc----cCCCcCccC
Confidence 7999999999999999999999999887511 23456789999999999999999999875 578899999
Q ss_pred CCCCcHHHHHHHcCCCC------------------CCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCCHHH
Q 039985 254 KKGYTLLHHVADMKHYK------------------EGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMTASD 313 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~~------------------~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~Tp~d 313 (357)
..|.||||+++..++.. ....+.|||+++...+..+.++.++. ..+++.+|.+|. ||++
T Consensus 200 ~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~-TpL~ 278 (337)
T 4g8k_A 200 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-TALL 278 (337)
T ss_dssp TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSC-BHHH
T ss_pred CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCC-CHHH
Confidence 99999999888766532 11234589999999888888888885 347888999999 9999
Q ss_pred HHhhhh
Q 039985 314 LFNLTH 319 (357)
Q Consensus 314 l~~~~~ 319 (357)
+|.+..
T Consensus 279 ~A~~~g 284 (337)
T 4g8k_A 279 LAVELK 284 (337)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987543
No 34
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=4.4e-31 Score=238.88 Aligned_cols=196 Identities=12% Similarity=0.016 Sum_probs=154.1
Q ss_pred CCCCHHHHHHhcCCHH----HHHHHHhcCcchhHHHhhhhh----cCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCC
Q 039985 100 ANISTISLGLGKGNML----KAKKLVDFSAGELDELLLKKD----CTNKGNMIKAKKFVDF---SAAELVELFVKKDCTI 168 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~----~vk~Ll~~~~~~~~~~l~~~~----~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~ 168 (357)
+|+||||.|+..|+.+ ++++|++.+.+ .+. .|..|.| |||+|+.. |+.++|++|++.|+++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-------i~~~~~~~d~~g~t-~L~~A~~~~~~g~~~~v~~Ll~~g~~~ 72 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY-------LTDSAYTEGSTGKT-CLMKAVLNLQDGVNACIMPLLQIDKDS 72 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-------TTSGGGSBTTTTBC-HHHHHHHTCBTTBCTTHHHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC-------cccccccCCCCCCC-HHHHHHHccccchHHHHHHHHhcCCcc
Confidence 4889999999999997 55666677877 555 7999999 99999999 9999999999999876
Q ss_pred CCCCC----CccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCC-------------CChHHHHHHHcCCH
Q 039985 169 KGVPN----HKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEK-------------EQNILHVAVKRRQY 231 (357)
Q Consensus 169 ~~~~~----~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~-------------G~TpLh~A~~~g~~ 231 (357)
+.... ...++|..|.||||+||..|+.++|++|+++|++++ .+|.. |+||||+|+..|+.
T Consensus 73 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 73 GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH---LRACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cccccccccccccccccCCCCHHHHHHHcCCH
Confidence 53321 111344569999999999999999999999999998 77776 99999999999999
Q ss_pred HHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-Cccc-------ccc
Q 039985 232 KVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYA-------MHR 303 (357)
Q Consensus 232 ~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~-------~~~ 303 (357)
+++++|++... .+++++.+|.+|+||||+|+..++.. ...... ..+.++.++. ..+. +.+
T Consensus 150 ~~v~~Ll~~~~--~ga~~n~~d~~g~TpLh~A~~~~~~~--------~~~~~~--~~~iv~~Ll~~ga~~~~~~~~~~~~ 217 (256)
T 2etb_A 150 DVVTYLLENPH--QPASLEATDSLGNTVLHALVMIADNS--------PENSAL--VIHMYDGLLQMGARLCPTVQLEEIS 217 (256)
T ss_dssp HHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCCSC--------HHHHHH--HHHHHHHHHHHHHHHSTTCCGGGCC
T ss_pred HHHHHHHhccc--cCCCcCccCCCCCCHHHHHHHcccCC--------chhhHH--HHHHHHHHHHcCCCccccccccccc
Confidence 99999987311 46799999999999999999954321 110000 0113444442 2355 789
Q ss_pred cccCCCCHHHHHhhhh
Q 039985 304 DEKNKMTASDLFNLTH 319 (357)
Q Consensus 304 n~~g~~Tp~dl~~~~~ 319 (357)
|.+|. ||+++|....
T Consensus 218 d~~g~-tpL~~A~~~g 232 (256)
T 2etb_A 218 NHQGL-TPLKLAAKEG 232 (256)
T ss_dssp CTTSC-CHHHHHHHTT
T ss_pred CCCCC-CHHHHHHHhC
Confidence 99999 9999997644
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=1.5e-29 Score=223.56 Aligned_cols=149 Identities=9% Similarity=0.052 Sum_probs=138.2
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.||||+|+..|+.+++++|++.++.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 56 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~ 121 (223)
T 2f8y_A 56 NMGRTPLHAAVSADAQGVFQILIRNRATD------LDARMHDGTT-PLILAARLAVEGMLEDLINSHADVN-------AV 121 (223)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHBTTSC------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CB
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC------cccCCCCCCc-HHHHHHHhCcHHHHHHHHHcCCCCc-------Cc
Confidence 45889999999999999999999998731 5567899999 9999999999999999999999987 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t 193 (223)
T 2f8y_A 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKD---MQNNREETPLFLAAREGSYETAKVLLD-----HFANRDITDHMDRL 193 (223)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCcCHHHHHHHcCCHHHHHHHHH-----cCCCCccccccCCC
Confidence 6669999999999999999999999999998 999999999999999999999999998 67899999999999
Q ss_pred HHHHHHHcCCC
Q 039985 259 LLHHVADMKHY 269 (357)
Q Consensus 259 pLh~Aa~~g~~ 269 (357)
|||+|+..|+.
T Consensus 194 ~l~~A~~~~~~ 204 (223)
T 2f8y_A 194 PRDIAQERMHH 204 (223)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhcch
Confidence 99999999973
No 36
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=3.5e-30 Score=223.04 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=140.6
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~------- 95 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDK-------LEDKDIEGST-ALIWAVKNNRLGIAEKLLSKGSNVN------- 95 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTT-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccc-------cccccccCcc-HHHHHHHcCCHHHHHHHHHCCCCCC-------
Confidence 345699999999999999999999999887 6778999999 9999999999999999999999987
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g 167 (192)
T 2rfm_A 96 TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN---DRNLEGETPLIVASKYGRSEIVKKLLE-----LGADISARDLTG 167 (192)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---CCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCBCTTS
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCC
Confidence 566679999999999999999999999999998 999999999999999999999999998 688999999999
Q ss_pred CcHHHHHHHcCCC
Q 039985 257 YTLLHHVADMKHY 269 (357)
Q Consensus 257 ~TpLh~Aa~~g~~ 269 (357)
.||||+|+..|+.
T Consensus 168 ~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 168 LTAEASARIFGRQ 180 (192)
T ss_dssp CBHHHHHHHTTCH
T ss_pred CCHHHHHHHhCcH
Confidence 9999999999973
No 37
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.7e-30 Score=217.80 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=138.6
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.|+..|+.++++.|++.+.. .+..|..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~ 66 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-------INHTDEEGFT-PLMWAAAHGQIAVVEFLLQNGADPQ-------LLG 66 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-------cCCCCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------CcC
Confidence 378999999999999999999999987 7778999999 9999999999999999999999987 555
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|.+|.||
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKMLLDCGVDVN---EYDWNGGTPLLYAVHGNHVKCVKMLLE-----SGADPTIETDSGYNS 138 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCC---cCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCH
Confidence 669999999999999999999999999998 999999999999999999999999998 688999999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
||+|+..|+.
T Consensus 139 l~~A~~~~~~ 148 (167)
T 3v31_A 139 MDLAVALGYR 148 (167)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHcCcH
Confidence 9999999973
No 38
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=4.6e-30 Score=233.91 Aligned_cols=195 Identities=15% Similarity=0.055 Sum_probs=169.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhc-CCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDC-TNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~-~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.|+||.|++.|+.++++.|++.+++ .+.. +..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~ 69 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGAN-------VNFQEEEGGWT-PLHNAVQMSREDIVELLLRHGADPV-------LRK 69 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCC-------cccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCc-------ccC
Confidence 77999999999999999999999987 4545 778999 9999999999999999999999987 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc-------
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI------- 252 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~------- 252 (357)
..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~~~~~ 141 (285)
T 1wdy_A 70 KNGATPFLLAAIAGSVKLLKLFLSKGADVN---ECDFYGFTAFMEAAVYGKVKALKFLYK-----RGANVNLRRKTKEDQ 141 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CBCTTCCBHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCcccCCHHHHHHHhCCHHHHHHHHH-----hCCCcccccccHHHH
Confidence 669999999999999999999999999998 899999999999999999999999998 56677666
Q ss_pred ---cCCCCcHHHHHHHcCCCCC---------------CCCCCChhHHHHHhhh----HHHHHHhcc-CcccccccccCCC
Q 039985 253 ---DKKGYTLLHHVADMKHYKE---------------GTRPGPVLQFQEELQL----FEHVKEIMP-RHYAMHRDEKNKM 309 (357)
Q Consensus 253 ---d~~G~TpLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~----~~~v~~ll~-~~~~~~~n~~g~~ 309 (357)
+..|.||||+|+..|+.+. ...+.|||+.+...+. .+.++.++. +.+.+.+|..|.
T Consensus 142 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~- 220 (285)
T 1wdy_A 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK- 220 (285)
T ss_dssp HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSC-
T ss_pred HhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCC-
Confidence 8889999999999998541 2344599999988766 555666664 347888999999
Q ss_pred CHHHHHhhhh
Q 039985 310 TASDLFNLTH 319 (357)
Q Consensus 310 Tp~dl~~~~~ 319 (357)
||+++|....
T Consensus 221 t~L~~A~~~~ 230 (285)
T 1wdy_A 221 TPLILAVEKK 230 (285)
T ss_dssp CHHHHHHHTT
T ss_pred cHHHHHHHcC
Confidence 9999997543
No 39
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.1e-31 Score=238.14 Aligned_cols=186 Identities=14% Similarity=0.119 Sum_probs=155.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+|+..|+.++++.|++.+..... ..+..|..|.| |||+|+..|+.++|++|+++|++++ .
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 73 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA---FLNFQNNLQQT-PLHLAVITNQPEIAEALLGAGCDPE-------L 73 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CC---CCCCCCTTCCC-HHHHHHHTTCHHHHHCCCSCCCCSC-------C
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHH---HhhccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------C
Confidence 45699999999999999999999988763100 14568899999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc---cccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAI---LLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~---~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
++..|.||||+|+..|+.+++++|++++++.. .++..|..|+||||+|+..|+.+++++|++ .+++++.+|.
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~ 148 (236)
T 1ikn_D 74 RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-----LGADVNAQEP 148 (236)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCC
Confidence 66679999999999999999999999997631 114788999999999999999999999998 6789999998
Q ss_pred -CCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 255 -KGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 255 -~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.|+||||+|+..|+. +.++.++. +.+.+.+|..|. ||+++|....
T Consensus 149 ~~g~tpL~~A~~~~~~-------------------~~v~~Ll~~ga~~~~~~~~g~-tpl~~A~~~~ 195 (236)
T 1ikn_D 149 CNGRTALHLAVDLQNP-------------------DLVSLLLKCGADVNRVTYQGY-SPYQLTWGRP 195 (236)
T ss_dssp TTCCCHHHHHHHTTCH-------------------HHHHHHHTTTCCSCCCCTTCC-CGGGGCTTSS
T ss_pred CCCCCHHHHHHHcCCH-------------------HHHHHHHHcCCCCCcccCCCC-CHHHHHHccC
Confidence 999999999999973 35666664 357889999999 9999997543
No 40
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=4.9e-30 Score=236.69 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=75.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+.. +|.| |||+|+..|+.++|++|+++|++++ .+|.
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~--~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~d~ 93 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGAL-------KNLL--ENEF-PLHQAATLEDTKIVKILLFSGLDDS-------QFDD 93 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGG-------GSCC--TTCC-HHHHHTTSSSCHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCC--CCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CcCC
Confidence 44555555555555555555555544 2222 2555 5555555555555555555555544 3333
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC-ChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC-CCCc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE-QNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK-KGYT 258 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G-~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~-~G~T 258 (357)
.|+||||+|+..|+.+++++|+++|+++. .+|..| .||||+|+..|+.+++++|++. +... .|. .|.|
T Consensus 94 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-----g~~~--~~~~~g~t 163 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVKLFVKKNWRLM---FYGKTGWKTSFYHAVMLNDVSIVSYFLSE-----IPST--FDLAILLS 163 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGG---GCSSSGGGSHHHHHHHTTCHHHHHHHHTT-----SCTT--CCCSTHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCC---ccCCCCCCCHHHHHHHcCCHHHHHHHHhC-----CCcc--ccccCCcc
Confidence 45555555555555555555555555555 555555 4555555555555555555542 2222 121 5555
Q ss_pred HHHHHHHcCCC
Q 039985 259 LLHHVADMKHY 269 (357)
Q Consensus 259 pLh~Aa~~g~~ 269 (357)
|||+|+..|+.
T Consensus 164 ~L~~A~~~g~~ 174 (285)
T 3kea_A 164 CIHITIKNGHV 174 (285)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcChH
Confidence 55555555553
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.8e-30 Score=219.02 Aligned_cols=128 Identities=20% Similarity=0.255 Sum_probs=116.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.++++.|++.+++ .+..|.+|.| |||+|+..|+.++|++|+++|++++ .+|.
T Consensus 37 g~t~l~~a~~~~~~~~~~~ll~~gad-------~~~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~gadvn-------~~d~ 101 (169)
T 4gpm_A 37 GRTPLHHAAENGHKEVVKLLISKGAD-------VNAKDSDGRT-PLHHAAENGHKEVVKLLISKGADVN-------AKDS 101 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccc-------hhhhccCCCC-HHHHHHHcCCHHHHHHHHHCcCCCC-------CCCC
Confidence 77999999999999999999999998 7889999999 9999999999999999999999987 6667
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
.|+||||+||+.|+.++|++|+++|+++. .+|.+|+||||+|+.+|+.+++++|++ .|++++.
T Consensus 102 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~~---~~d~~G~TpL~~A~~~g~~~iv~~Ll~-----~GA~ie~ 164 (169)
T 4gpm_A 102 DGRTPLHHAAENGHKEVVKLLISKGADVN---TSDSDGRTPLDLAREHGNEEVVKLLEK-----QGGWLEH 164 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHT-----C------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCcCC
Confidence 79999999999999999999999999998 999999999999999999999999988 6666654
No 42
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=2.9e-30 Score=245.47 Aligned_cols=184 Identities=15% Similarity=0.136 Sum_probs=153.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc----CCCCCCCCC---
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK----DCTIKGVPN--- 173 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~----g~~~~~~~~--- 173 (357)
|.||||+|+..|+.+++++|++.++. ..+.+|.| |||+|+..|+.++|++|+++ |++++....
T Consensus 53 g~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 122 (364)
T 3ljn_A 53 GCTALHLACKFGCVDTAKYLASVGEV---------HSLWHGQK-PIHLAVMANKTDLVVALVEGAKERGQMPESLLNECD 122 (364)
T ss_dssp CCCHHHHHHHHCCHHHHHHHHHHCCC---------CCCBTTBC-HHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC---------ccccCCCC-HHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcc
Confidence 77999999999999999999999886 12348999 99999999999999999999 666542000
Q ss_pred -------CccCCCcCcchHHHHHHHCC--CHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccC
Q 039985 174 -------HKKDKNWAIRLTLLFAASNG--ITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS 244 (357)
Q Consensus 174 -------~~~~~~~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 244 (357)
..+.++..|.||||+|+..| +.++|++|+++|++++ .+|..|+||||+|+..|+.++|++|++.....
T Consensus 123 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~---~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 199 (364)
T 3ljn_A 123 EREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT---AKDKADETPLMRAMEFRNREALDLMMDTVPSK 199 (364)
T ss_dssp CCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS
T ss_pred hHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCCHHHHHHHHhccccc
Confidence 00015667999999999999 9999999999999998 99999999999999999999999999842111
Q ss_pred CccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC
Q 039985 245 VPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR 297 (357)
Q Consensus 245 ~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~ 297 (357)
.+.+++.+|..|+||||+|+..|+.+. ...+.|||++|...+..+.++.|+..
T Consensus 200 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 200 SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 223399999999999999999998651 23455999999999999998888853
No 43
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=5.4e-30 Score=217.62 Aligned_cols=149 Identities=17% Similarity=0.089 Sum_probs=138.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
.+.+.++||.|++.|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 75 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD-------VNAEDASGWT-PLHLAAFNGHLEIVEVLLKNGADVN-------A 75 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------C
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------c
Confidence 34477999999999999999999999988 7778999999 9999999999999999999999887 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVLLKNGADVN---ANDMEGHTPLHLAAMFGHLEIVEVLLK-----NGADVNAQDKFGK 147 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCC
Confidence 56669999999999999999999999999998 999999999999999999999999998 6789999999999
Q ss_pred cHHHHHHHcCCC
Q 039985 258 TLLHHVADMKHY 269 (357)
Q Consensus 258 TpLh~Aa~~g~~ 269 (357)
||||+|+..|+.
T Consensus 148 t~l~~A~~~~~~ 159 (169)
T 2y1l_E 148 TAFDISIDNGNE 159 (169)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHhCCH
Confidence 999999999973
No 44
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=8.1e-30 Score=235.11 Aligned_cols=168 Identities=12% Similarity=0.044 Sum_probs=126.4
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++. +.
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~ 155 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQ-------VNGVTADWHT-PLFNACVSGSWDCVNLLLQHGASVQP--------ES 155 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------SSCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSSC--------SC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCHHHHHHHHHHCCCCCCC--------CC
Confidence 66888888888888888888888777 6667788888 88888888888888888888877651 12
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+++++. |..|+|||
T Consensus 156 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~-~~~g~t~L 226 (285)
T 3d9h_A 156 DLASPIHEAARRGHVECVNSLIAYGGNID---HKISHLGTPLYLACENQQRACVKKLLE-----SGADVNQ-GKGQDSPL 226 (285)
T ss_dssp TTSCHHHHHHHHTCHHHHHHHHHTTCCTT---CCBTTTBCHHHHHHHTTCHHHHHHHHH-----TTCCTTC-CBTTBCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHH-----CCCCCCC-CCCCCCHH
Confidence 27888888888888888888888888877 778888888888888888888888877 4566663 77888888
Q ss_pred HHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 261 HHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 261 h~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|+|+..|+.+. +..+.|||++|.. ..+.++.++
T Consensus 227 ~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll 273 (285)
T 3d9h_A 227 HAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFL 273 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccHHHHHHH
Confidence 88888887541 2344488887762 334455444
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.3e-30 Score=249.55 Aligned_cols=184 Identities=11% Similarity=0.043 Sum_probs=160.2
Q ss_pred CCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcC---CCCCC
Q 039985 94 SSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKD---CTIKG 170 (357)
Q Consensus 94 ~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g---~~~~~ 170 (357)
.+..+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|++++ ++++
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~- 229 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-------PTIYNKSERS-ALHQAAANRDFGMMVYMLNSTKLKGDIE- 229 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTCCC-HHHHHHHTTCHHHHHHHTTSHHHHHTTS-
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-------CcccCCCCCC-HHHHHHHCCCHHHHHHHHhcCccccChh-
Confidence 344456799999999999999999999999998 7788999999 999999999999999999987 5665
Q ss_pred CCCCccCCCcCcchHHHHHHHCC---CHHHHHHHHhhCCCccc-----ccccCCCCChHHHHHHHcCCHHHHHHHHhhhc
Q 039985 171 VPNHKKDKNWAIRLTLLFAASNG---ITEILKEIIHQHPQAIL-----LDNLNEKEQNILHVAVKRRQYKVFELITKEMQ 242 (357)
Q Consensus 171 ~~~~~~~~~~~G~TpLh~Aa~~G---~~~iv~~Ll~~~~~~~~-----~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~ 242 (357)
.+|..|.||||+|+..| +.+++++|+++|+++.. .+..|..|+||||+|+..|+.++|++|++.
T Consensus 230 ------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-- 301 (373)
T 2fo1_E 230 ------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE-- 301 (373)
T ss_dssp ------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH--
T ss_pred ------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh--
Confidence 55666999999999998 89999999999999871 013678999999999999999999999985
Q ss_pred cCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc
Q 039985 243 LSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP 296 (357)
Q Consensus 243 ~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~ 296 (357)
.+.+++.+|.+|+||||+|+..|+.+. +..+.|||++|...+..+.++.|+.
T Consensus 302 --~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 302 --KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp --SCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred --cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 458999999999999999999998651 2345599999999988888877763
No 46
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.8e-29 Score=237.01 Aligned_cols=198 Identities=14% Similarity=0.066 Sum_probs=169.4
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.+|.|+||.|++.|+.+.++.|+.....+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~ 87 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVN------CHASDGRKST-PLHLAAGYNRVRIVQLLLQHGADVH-------AK 87 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTT------CCCSSTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CC
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCC------cccCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------cc
Confidence 34789999999999999999999763331 5668899999 9999999999999999999999987 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc-------
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR------- 251 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~------- 251 (357)
|..|.||||+|+..|+.+++++|+++|+++. ..|..|+||||+|+..|+.+++++|++. +.+++.
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~~ 159 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACVN---AMDLWQFTPLHEAASKNRVEVCSLLLSH-----GADPTLVNCHGKS 159 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCC
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHHc-----CCCCccccCCCCc
Confidence 6679999999999999999999999999998 8999999999999999999999999983 444443
Q ss_pred -----------------------------------------------ccCCCCcHHHHHHHcCCCC--------------
Q 039985 252 -----------------------------------------------IDKKGYTLLHHVADMKHYK-------------- 270 (357)
Q Consensus 252 -----------------------------------------------~d~~G~TpLh~Aa~~g~~~-------------- 270 (357)
.+..|.||||+|+..++..
T Consensus 160 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~ 239 (351)
T 3utm_A 160 AVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN 239 (351)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC
T ss_pred chHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC
Confidence 4467889999999997642
Q ss_pred ---CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 271 ---EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 271 ---~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
....+.|||++|...+..+.++.++. +.+.+.+|..|. ||+++|....
T Consensus 240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~-t~L~~A~~~~ 291 (351)
T 3utm_A 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQ-TALHRAALAG 291 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHHT
T ss_pred cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHHHHHHHcC
Confidence 12345599999999999998988884 458888999999 9999997543
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=5.4e-29 Score=216.42 Aligned_cols=146 Identities=16% Similarity=0.087 Sum_probs=134.7
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK-DCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~ 179 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|++. +++++ .++
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~-------~~~ 103 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRGAD-------INLQNSISDS-PYLYAGAQGRTEILAYMLKHATPDLN-------KHN 103 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCCCTT-------CCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHhccCcccc-------ccc
Confidence 78999999999999999999999998 7788999999 99999999999999999954 55655 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhC-CCcccccccCCCCChHHHHHHHcCC-----HHHHHHHHhhhccCCcccccccc
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQH-PQAILLDNLNEKEQNILHVAVKRRQ-----YKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~~g~-----~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
..|.||||+|+..|+.+++++|+++| ++++ .+|..|+||||+|+..++ .+++++|++ .+++++.+|
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~-----~ga~~~~~~ 175 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGREDID---FQNDFGYTALIEAVGLREGNQLYQDIVKLLME-----NGADQSIKD 175 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT---CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH-----TTCCTTCCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC---CCCCCCCCHHHHHHHhccchhhHHHHHHHHHH-----CCCCCCccC
Confidence 66999999999999999999999999 6776 999999999999999998 999999998 688999999
Q ss_pred CCCCcHHHHHHHcCCC
Q 039985 254 KKGYTLLHHVADMKHY 269 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~ 269 (357)
..|+||||+|+..|+.
T Consensus 176 ~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 176 NSGRTAMDYANQKGYT 191 (201)
T ss_dssp TTSCCHHHHHHHHTCH
T ss_pred CCCCCHHHHHHHcCCH
Confidence 9999999999999973
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=3.5e-30 Score=235.30 Aligned_cols=204 Identities=13% Similarity=0.090 Sum_probs=152.6
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcc---hhHHHhhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCC
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAG---ELDELLLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKG 170 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~---~~~~~l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~ 170 (357)
.+..|.||||.|+..|+.++++.|++.+.. +++.. ....|..|.| |||+|+.. |+.++|++|+++|++...
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~~~~~g~t-pL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDS--EFKDPETGKT-CLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSG--GGSCTTTCCC-HHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCc--ccccCcCCCC-HHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 445699999999999999999999975322 11100 0135789999 99999987 999999999999876432
Q ss_pred C----CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC--------------CCChHHHHHHHcCCHH
Q 039985 171 V----PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE--------------KEQNILHVAVKRRQYK 232 (357)
Q Consensus 171 ~----~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~--------------~G~TpLh~A~~~g~~~ 232 (357)
+ ......+|..|.||||+||..|+.++|++|+++|++++ .+|. .|+||||+|+..|+.+
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ---AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC---ccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 1 11111355679999999999999999999999999998 7776 7999999999999999
Q ss_pred HHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc-------cccc
Q 039985 233 VFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA-------MHRD 304 (357)
Q Consensus 233 iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~-------~~~n 304 (357)
++++|++... .+++++.+|.+|+||||+|+..|+.. ..... ...+.++.++.. .+. +.+|
T Consensus 163 ~v~~Ll~~~~--~gad~~~~d~~g~tpLh~A~~~~~~~--------~~~~~--~~~~~v~~Ll~~ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 163 IVKFLLQNSW--QPADISARDSVGNTVLHALVEVADNT--------VDNTK--FVTSMYNEILILGAKLHPTLKLEEITN 230 (273)
T ss_dssp HHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCCSC--------HHHHH--HHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHhccc--CCCCceeeCCCCCcHHHHHHHccCcc--------hhHHH--HHHHHHHHHHHhhhhcccccccccccC
Confidence 9999987311 36799999999999999999998732 00000 012334444422 233 3589
Q ss_pred ccCCCCHHHHHhhhh
Q 039985 305 EKNKMTASDLFNLTH 319 (357)
Q Consensus 305 ~~g~~Tp~dl~~~~~ 319 (357)
.+|. ||+++|....
T Consensus 231 ~~g~-TpL~~A~~~g 244 (273)
T 2pnn_A 231 RKGL-TPLALAASSG 244 (273)
T ss_dssp TTSC-CHHHHHHHTT
T ss_pred CCCC-CHHHHHHHhC
Confidence 9999 9999997543
No 49
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.9e-29 Score=210.54 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=134.6
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
.|+||.|+..|+.++++.|++.+.. .. .+..|.| |||+|+..|+.+++++|+++|++++ .++..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~-------~~-~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~ 66 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAP-------FT-TDWLGTS-PLHLAAQYGHFSTTEVLLRAGVSRD-------ARTKV 66 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC-------CC-CCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCTT
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC-------CC-cCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCC
Confidence 4899999999999999999999886 32 5888999 9999999999999999999999887 56666
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.||||
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKHGADVN---AKDMLKMTALHWATEHNHQEVVELLIK-----YGADVHTQSKFCKTAFD 138 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHHH
Confidence 9999999999999999999999999998 999999999999999999999999998 68899999999999999
Q ss_pred HHHHcCCC
Q 039985 262 HVADMKHY 269 (357)
Q Consensus 262 ~Aa~~g~~ 269 (357)
+|+..|+.
T Consensus 139 ~A~~~~~~ 146 (153)
T 1awc_B 139 ISIDNGNE 146 (153)
T ss_dssp HHHHTTCH
T ss_pred HHHHcCCH
Confidence 99999973
No 50
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=1.3e-29 Score=238.52 Aligned_cols=255 Identities=13% Similarity=0.105 Sum_probs=175.5
Q ss_pred cccHHHHHHHHHhhhhc--ccCC-CCCCCcCcCCCCCCCCCC------CCCCCCCCCCCCCCC------CCCCC-CCCCC
Q 039985 26 HKNANKLLKKLVKEETL--CLGD-GEQNPEISLLSPESSSTS------LPNPEISSSNPESST------SSLPN-PEIFS 89 (357)
Q Consensus 26 ~~~~~~iv~~Ll~~~~~--~~d~-~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~-~~~~~ 89 (357)
..+..++||+||++|++ ..++ .|+||++.+....+...- ............... ..... .....
T Consensus 34 ~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (337)
T 4g8k_A 34 QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLS 113 (337)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhh
Confidence 34668999999999998 4554 599999866443321000 000000000000000 00000 00001
Q ss_pred CCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcc-hhHH--HhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHH-cC
Q 039985 90 PDPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAG-ELDE--LLLKKDCTNKGNMIKAKKFVDFSAAELVELFVK-KD 165 (357)
Q Consensus 90 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~-~~~~--~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~-~g 165 (357)
...+.+..+..|.||||+|+..|+.++++.|++.+++ .+.. .......+..|.| |||+|+..|+.++|++||+ .|
T Consensus 114 ~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T-~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 114 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT-ALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCC-HHHHHHHHTCHHHHHHHHHHSC
T ss_pred ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCc-HHHHHHHCCCHHHHHHHHhccC
Confidence 1223344566799999999999999999999999886 0000 0012235678999 9999999999999999996 58
Q ss_pred CCCCCCCCCccCCCcCcchHHHHHHHCCC----HHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhh
Q 039985 166 CTIKGVPNHKKDKNWAIRLTLLFAASNGI----TEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEM 241 (357)
Q Consensus 166 ~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~----~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 241 (357)
++++ .++..|.||||+++..++ ..++++|+++|++++ .+|..|+||||+|+..|+.+++++|+..
T Consensus 193 ad~n-------~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n---~~d~~g~t~L~~a~~~~~~~~v~~Ll~~- 261 (337)
T 4g8k_A 193 ADVN-------ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRLLEQ- 261 (337)
T ss_dssp CCTT-------CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT---CCCGGGCCHHHHHHHTTCHHHHHHHHTS-
T ss_pred CCcC-------ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHhhhhHHHHHHHHh-
Confidence 8887 566679999999886554 468899999999998 9999999999999999999999999875
Q ss_pred ccCCccccccccCCCCcHHHHHHHcCCCCC---------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 242 QLSVPKWASRIDKKGYTLLHHVADMKHYKE---------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 242 ~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~---------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
.+.+++.+|.+|+||||+|++.|+.+. .....+||+.|...+..+.|+.|+
T Consensus 262 ---~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 262 ---EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp ---TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHHHHH
T ss_pred ---cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 578999999999999999999998541 112234555555555555555544
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1.6e-29 Score=228.64 Aligned_cols=160 Identities=13% Similarity=0.100 Sum_probs=132.7
Q ss_pred CCCHHHHHHhc---CCHHHHHHHHhcCcch--hHHHhh--hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCC
Q 039985 101 NISTISLGLGK---GNMLKAKKLVDFSAGE--LDELLL--KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 101 g~t~Lh~A~~~---g~~~~vk~Ll~~~~~~--~~~~l~--~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~ 173 (357)
|.||||+|+.. |+.+++++|++.+++. ...++. ....|..|.| |||+|+..|+.++|++|+++|++++....
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 121 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHS-ALHIAIEKRSLQCVKLLVENGADVHLRAC 121 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCC-HHHHHHHcCCHHHHHHHHHcCCCCCcccc
Confidence 77999999999 9999999999988761 000000 0124578999 99999999999999999999999873222
Q ss_pred C------ccCCCcCcchHHHHHHHCCCHHHHHHHHh---hCCCcccccccCCCCChHHHHHHH--cCCHH-------HHH
Q 039985 174 H------KKDKNWAIRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVAVK--RRQYK-------VFE 235 (357)
Q Consensus 174 ~------~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~d~~G~TpLh~A~~--~g~~~-------iv~ 235 (357)
. .+..+..|.||||+|+..|+.++|++|++ +|++++ .+|..|+||||+|+. .++.+ +++
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n---~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~ 198 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE---ATDSLGNTVLHALVMIADNSPENSALVIHMYD 198 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC---ccCCCCCCHHHHHHHcccCCchhhHHHHHHHH
Confidence 1 00112239999999999999999999999 999998 999999999999999 88888 999
Q ss_pred HHHhhhccCCcccc-------ccccCCCCcHHHHHHHcCCC
Q 039985 236 LITKEMQLSVPKWA-------SRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 236 ~Ll~~~~~~~~~~~-------~~~d~~G~TpLh~Aa~~g~~ 269 (357)
+|++ .++++ +.+|..|+||||+|+..|+.
T Consensus 199 ~Ll~-----~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 199 GLLQ-----MGARLCPTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp HHHH-----HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHH-----cCCCcccccccccccCCCCCCHHHHHHHhCCH
Confidence 9998 56677 89999999999999999973
No 52
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=3.1e-29 Score=231.29 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=160.9
Q ss_pred ccHHHHHHHHHhhhhcccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q 039985 27 KNANKLLKKLVKEETLCLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTIS 106 (357)
Q Consensus 27 ~~~~~iv~~Ll~~~~~~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh 106 (357)
.++.+++++|...+.+..|..|+||++.+....... ......+. ..+. ....|.||||
T Consensus 10 ~~~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~-------~v~~Ll~~-------------g~~~--~~~~g~t~L~ 67 (285)
T 3kea_A 10 WKSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVR-------LVCTLLNA-------------GALK--NLLENEFPLH 67 (285)
T ss_dssp CCHHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHH-------HHHHHHHT-------------TGGG--SCCTTCCHHH
T ss_pred cCHHHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHH-------HHHHHHhC-------------CCCC--CCCCCCCHHH
Confidence 466777888877765588999999988654332200 00000000 0000 1113899999
Q ss_pred HHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc-chH
Q 039985 107 LGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI-RLT 185 (357)
Q Consensus 107 ~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G-~Tp 185 (357)
+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .++..| .||
T Consensus 68 ~A~~~g~~~~v~~Ll~~ga~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~~~g~~t~ 132 (285)
T 3kea_A 68 QAATLEDTKIVKILLFSGLD-------DSQFDDKGNT-ALYYAVDSGNMQTVKLFVKKNWRLM-------FYGKTGWKTS 132 (285)
T ss_dssp HHTTSSSCHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCGGGG-------GCSSSGGGSH
T ss_pred HHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCC-------ccCCCCCCCH
Confidence 99999999999999999998 7788999999 9999999999999999999999987 556668 799
Q ss_pred HHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH-HHHHH
Q 039985 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL-LHHVA 264 (357)
Q Consensus 186 Lh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp-Lh~Aa 264 (357)
||+|+..|+.+++++|+++|++.. .. ..|+||||+|+..|+.+++++|++ .+++++.+|..|+|| ||+|+
T Consensus 133 L~~A~~~~~~~~v~~Ll~~g~~~~---~~-~~g~t~L~~A~~~g~~~~v~~Ll~-----~gad~n~~~~~g~t~~L~~A~ 203 (285)
T 3kea_A 133 FYHAVMLNDVSIVSYFLSEIPSTF---DL-AILLSCIHITIKNGHVDMMILLLD-----YMTSTNTNNSLLFIPDIKLAI 203 (285)
T ss_dssp HHHHHHTTCHHHHHHHHTTSCTTC---CC-STHHHHHHHHHHTTCHHHHHHHHH-----HHHHTCTTCCCBCCTTHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCccc---cc-cCCccHHHHHHHcChHHHHHHHHH-----cCCCCCcccCCCCChHHHHHH
Confidence 999999999999999999998876 22 289999999999999999999998 578999999999998 99999
Q ss_pred HcCCCC
Q 039985 265 DMKHYK 270 (357)
Q Consensus 265 ~~g~~~ 270 (357)
..|+.+
T Consensus 204 ~~~~~~ 209 (285)
T 3kea_A 204 DNKDIE 209 (285)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 999855
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.3e-29 Score=211.46 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=134.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
..||||.|+..|+.++++.|++.+.+ .+..|..|.| |||+|+. |+.+++++|+++|++++ .++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~-------~~~~~~~g~t-~L~~A~~-~~~~~v~~Ll~~g~~~~-------~~~~ 68 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN-------VNAQNGFGRT-ALQVMKL-GNPEIARRLLLRGANPD-------LKDR 68 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC-------TTCCCTTSCC-HHHHCCS-SCHHHHHHHHHTTCCTT-------CCCT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC-------ccccCccCcc-HHHHHHc-CcHHHHHHHHHcCCCCC-------CCCC
Confidence 56899999999999999999999988 7778999999 9999999 99999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc-cccccCCCCcH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW-ASRIDKKGYTL 259 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~-~~~~d~~G~Tp 259 (357)
.|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++. +.+ ++.+|..|.||
T Consensus 69 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~~g~t~ 140 (162)
T 1ihb_A 69 TGFAVIHDAARAGFLDTLQTLLEFQADVN---IEDNEGNLPLHLAAKEGHLRVVEFLVKH-----TASNVGHRNHKGDTA 140 (162)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH-----SCCCTTCCCTTSCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHc-----cCCCCCCcCCCCCcH
Confidence 79999999999999999999999999998 9999999999999999999999999984 444 79999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
||+|+..|+.
T Consensus 141 l~~A~~~~~~ 150 (162)
T 1ihb_A 141 CDLARLYGRN 150 (162)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHcCCH
Confidence 9999999973
No 54
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=1.3e-29 Score=233.96 Aligned_cols=174 Identities=16% Similarity=0.166 Sum_probs=146.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .++.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~ 137 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGAN-------INQPDNEGWI-PLHAAASCGYLDIAEYLISQGAHVG-------AVNS 137 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCc-HHHHHHHcCCHHHHHHHHhCCCCCC-------CcCC
Confidence 77999999999999999999999998 7788999999 9999999999999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhh-CCCccc-----------------------ccccCCCCChHHHHHHHcCCHHHHHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQ-HPQAIL-----------------------LDNLNEKEQNILHVAVKRRQYKVFEL 236 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~-~~~~~~-----------------------~~~~d~~G~TpLh~A~~~g~~~iv~~ 236 (357)
.|.||||+|+..|+.++++.|+.. +.++.. ....+..|.||||+|+..|+.+++++
T Consensus 138 ~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 217 (299)
T 1s70_B 138 EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL 217 (299)
T ss_dssp TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHH
Confidence 699999999999999999887754 332210 02356789999999999999999999
Q ss_pred HHhhhccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 237 ITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 237 Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|++ .+++++.+|..|+||||+|+..|+.+. +..+.|||++|.+ ...+.++.++
T Consensus 218 Ll~-----~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~ 284 (299)
T 1s70_B 218 LIQ-----ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE-DILGYLEELQ 284 (299)
T ss_dssp HHT-----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS-GGGHHHHHHH
T ss_pred HHH-----cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-HHHHHHHHHH
Confidence 987 688999999999999999999998651 3345599999855 3344444444
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.9e-29 Score=208.93 Aligned_cols=144 Identities=14% Similarity=0.140 Sum_probs=132.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCc-chhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSA-GELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~-~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.|+||.|+..|+.++++.|++... + .+..|..|.| |||+ +..|+.+++++|+++|++++ .+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~-------~~~~~~~g~t-~L~~-~~~~~~~~v~~Ll~~g~~~~-------~~~ 65 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH-------PDALNRFGKT-ALQV-MMFGSTAIALELLKQGASPN-------VQD 65 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC-------TTCCCTTSCC-HHHH-SCTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC-------ccccCCCCCc-HHHH-HHcCCHHHHHHHHHCCCCCC-------CcC
Confidence 4589999999999999999999832 3 5668899999 9999 99999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ . .+++.+|.+|.||
T Consensus 66 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~-~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVN---VPDGTGALPIHLAVQEGHTAVVSFLAA-----E-SDLHRRDARGLTP 136 (156)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHHTCHHHHHHHHT-----T-SCTTCCCTTSCCH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHhChHHHHHHHHh-----c-cCCCCcCCCCCCH
Confidence 679999999999999999999999999998 999999999999999999999999987 5 7899999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
||+|+..|+.
T Consensus 137 l~~A~~~~~~ 146 (156)
T 1bd8_A 137 LELALQRGAQ 146 (156)
T ss_dssp HHHHHHSCCH
T ss_pred HHHHHHcCcH
Confidence 9999999973
No 56
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=9.3e-30 Score=239.42 Aligned_cols=196 Identities=10% Similarity=0.028 Sum_probs=143.6
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhh-cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKD-CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~-~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
+.+|+|+..+..++++.|++.+.+ .+. .|..|.| |||+|+..|+.++|++||++|++++ .+|..
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~d-------vn~~~d~~g~T-pLh~Aa~~g~~~~v~~Ll~~Gad~n-------~~d~~ 163 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLN-------LNIPVDEHGNT-PLHWLTSIANLELVKHLVKHGSNRL-------YGDNM 163 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCC-------SCSCCSTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------BCCTT
T ss_pred chhHHHHHhhHHHHHHHHHhcCCC-------cccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCC
Confidence 567888888888999999988887 677 7889999 9999999999999999999998887 56666
Q ss_pred cchHHHHHHHCCC---HHHHHHHHhhC-CCcccccccCCCCChHHHHHHH----cCCHHHHHHHHhhhc-----------
Q 039985 182 IRLTLLFAASNGI---TEILKEIIHQH-PQAILLDNLNEKEQNILHVAVK----RRQYKVFELITKEMQ----------- 242 (357)
Q Consensus 182 G~TpLh~Aa~~G~---~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~----~g~~~iv~~Ll~~~~----------- 242 (357)
|+||||+|+..|+ .++++.|++.+ +++. .+|..|+||||+|+. .|+.+++++|++...
T Consensus 164 g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~---~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 164 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLI---LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG---EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCHHHHHHHhcccccHHHHHHHHHhhhcccc---CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 9999999999998 68888888877 4555 889999999999998 889999999987421
Q ss_pred ----cCCccccccccCCCCcHHHHHHHcC-----CCC-CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCH
Q 039985 243 ----LSVPKWASRIDKKGYTLLHHVADMK-----HYK-EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTA 311 (357)
Q Consensus 243 ----~~~~~~~~~~d~~G~TpLh~Aa~~g-----~~~-~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp 311 (357)
...+++++.+|..|.||||+|+... +.. ....+.||||+|...+..+.|+.|+. +.+.+.+|.+|+ ||
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~-Tp 319 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL-RP 319 (327)
T ss_dssp EEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC-CG
T ss_pred HhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CH
Confidence 0016788888888999999886310 111 23345589999888888888888884 458899999999 99
Q ss_pred HHHHhh
Q 039985 312 SDLFNL 317 (357)
Q Consensus 312 ~dl~~~ 317 (357)
+++|.+
T Consensus 320 L~~A~~ 325 (327)
T 1sw6_A 320 VDFGAG 325 (327)
T ss_dssp GGGTCC
T ss_pred HHHHHh
Confidence 999864
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=5.5e-29 Score=228.63 Aligned_cols=150 Identities=14% Similarity=0.115 Sum_probs=138.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCc-chhHHHhhhhhcCCCCCcHHHHHHH-----hcCcHHHHHHHHHcCCCCCCC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSA-GELDELLLKKDCTNKGNMIKAKKFV-----DFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~-~~~~~~l~~~~~~~~g~t~pLh~A~-----~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
+..|.||||+|+..|+.+++++|++.++ + .+..+..|.| |||+|+ ..++.+++++|++.|....
T Consensus 108 d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~-------~~~~~~~g~t-pL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-- 177 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFPVVQQLLDSGVCK-------VDKQNRAGYS-PIMLTALATLKTQDDIETVLQLFRLGNINA-- 177 (276)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTSCCC-------TTCCCTTSCC-HHHHGGGCCCCSHHHHHHHHHHHHHSCTTC--
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-------CCCCCCCCCC-HHHHHHHHHhhhhhhHHHHHHHHHcCCCcc--
Confidence 4459999999999999999999999998 5 6678999999 999999 6789999999999997765
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
..+..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++. .+++++.
T Consensus 178 -----~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n---~~d~~G~TpLh~A~~~g~~~iv~~Ll~~----~gad~~~ 245 (276)
T 4hbd_A 178 -----KASQAGQTALMLAVSHGRVDVVKALLACEADVN---VQDDDGSTALMCACEHGHKEIAGLLLAV----PSCDISL 245 (276)
T ss_dssp -----CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHTS----TTCCTTC
T ss_pred -----ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHhc----CCCCCcC
Confidence 455569999999999999999999999999998 9999999999999999999999999874 5789999
Q ss_pred ccCCCCcHHHHHHHcCCC
Q 039985 252 IDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 252 ~d~~G~TpLh~Aa~~g~~ 269 (357)
+|.+|+||||+|+..|+.
T Consensus 246 ~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 246 TDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CCTTSCCHHHHHHHHTCH
T ss_pred cCCCCCCHHHHHHHcCCH
Confidence 999999999999999973
No 58
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.6e-29 Score=228.94 Aligned_cols=197 Identities=10% Similarity=0.039 Sum_probs=152.0
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHh----cCcchhHHHhhhhh----cCCCCCcHHHHHHH---hcCcHHHHHHHHHcCCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVD----FSAGELDELLLKKD----CTNKGNMIKAKKFV---DFSAAELVELFVKKDCT 167 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~----~~~~~~~~~l~~~~----~~~~g~t~pLh~A~---~~g~~~iv~~Ll~~g~~ 167 (357)
.+|+|+||.|++.|+.+.++.|++ .+.. .+. .+..|.| |||+|+ ..|+.++|++|++.|++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-------~~~~~~~~~~~g~t-~L~~A~~~~~~g~~~~v~~Ll~~g~~ 74 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-------LTDEEFREPSTGKT-CLPKALLNLSAGRNDTIPILLDIAEK 74 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-------TTSGGGSCTTTCCC-HHHHHHTSCBTTBCTHHHHHHHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-------cchhhhhccCCCCc-HHHHHHHHhhcCCHHHHHHHHHhccc
Confidence 458899999999999996665555 7766 232 3478999 999999 77999999999999875
Q ss_pred CCCC----CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC--------------CCCChHHHHHHHcC
Q 039985 168 IKGV----PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN--------------EKEQNILHVAVKRR 229 (357)
Q Consensus 168 ~~~~----~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d--------------~~G~TpLh~A~~~g 229 (357)
.... ....+.+|..|+||||+||..|+.++|++|+++|++++ .+| ..|+||||+|+..|
T Consensus 75 ~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 151 (260)
T 3jxi_A 75 TGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH---AQARGRFFQPKDEGGYFYFGELPLSLAACTN 151 (260)
T ss_dssp TTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCEECCCSSSCCCCSCCSCSSHHHHHHHTT
T ss_pred ccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC---ccccccccCcccccccccCCCCHHHHHHHcC
Confidence 3321 11112555679999999999999999999999999998 777 68999999999999
Q ss_pred CHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc-------c
Q 039985 230 QYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA-------M 301 (357)
Q Consensus 230 ~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~-------~ 301 (357)
+.+++++|++... .+++++.+|..|+||||+|+..|+.. .... ....+.++.++.. .+. +
T Consensus 152 ~~~~v~~Ll~~~~--~ga~~~~~d~~g~TpLh~A~~~~~~~--------~~~~--~~~~~~v~~Ll~~ga~~~~~~~~~~ 219 (260)
T 3jxi_A 152 QPHIVHYLTENGH--KQADLRRQDSRGNTVLHALVAIADNT--------RENT--KFVTKMYDLLLIKCAKLFPDTNLEA 219 (260)
T ss_dssp CHHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCCSS--------HHHH--HHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred CHHHHHHHHhccc--cCCCCcccCCCCCcHHHHHHHhccCc--------hhHH--HHHHHHHHHHHHhCcccccccchhh
Confidence 9999999987311 36799999999999999999988632 0000 0012344444432 244 6
Q ss_pred cccccCCCCHHHHHhhhh
Q 039985 302 HRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 302 ~~n~~g~~Tp~dl~~~~~ 319 (357)
.+|.+|. ||+++|....
T Consensus 220 ~~d~~g~-tpL~~A~~~g 236 (260)
T 3jxi_A 220 LLNNDGL-SPLMMAAKTG 236 (260)
T ss_dssp CCCTTSC-CHHHHHHHTT
T ss_pred cccCCCC-CHHHHHHHcC
Confidence 7999999 9999997643
No 59
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=2e-28 Score=217.73 Aligned_cols=172 Identities=12% Similarity=0.006 Sum_probs=91.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhh-hcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKK-DCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~-~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.||||+|+..|+.+++++|++.++. .. ..+..|.| |||+|+..|+.+++++|++.|++++ .++
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~~~~-------~~~~~~~~~~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~ 106 (240)
T 3eu9_A 42 NVTLLHWAAINNRIDLVKYYISKGAI-------VDQLGGDLNST-PLHWATRQGHLSMVVQLMKYGADPS-------LID 106 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCBTTTTBC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCc-------chhhcCCcCCC-hhHHHHHcCCHHHHHHHHHcCCCCc-------ccC
Confidence 44555555555555555555555554 22 22233555 5555555555555555555555544 333
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCC-HHHHHHHHhhhccCCccccccccC-CCC
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQ-YKVFELITKEMQLSVPKWASRIDK-KGY 257 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~-~~iv~~Ll~~~~~~~~~~~~~~d~-~G~ 257 (357)
..|.||||+|+..|+.+++++|+++|+++. .+|..|.||||+|+..++ .+++++|+. .+.+++..+. .|+
T Consensus 107 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~---~~~~~g~t~l~~a~~~~~~~~~~~~L~~-----~~~~~~~~~~~~g~ 178 (240)
T 3eu9_A 107 GEGCSCIHLAAQFGHTSIVAYLIAKGQDVD---MMDQNGMTPLMWAAYRTHSVDPTRLLLT-----FNVSVNLGDKYHKN 178 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHCCSSTTHHHHHH-----TTCCTTCCCTTTCC
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHhcCCCcc---ccCCCCCcHHHHHHHhCChHHHHHHHHh-----cCCCcchhhccCCC
Confidence 345555555555555555555555555555 555555555555554444 455555544 4445555554 555
Q ss_pred cHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 258 TLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 258 TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
||||+|+..|+.+. ...+.|||++|...+..+.++.++
T Consensus 179 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~ 230 (240)
T 3eu9_A 179 TALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQ 230 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 55555555555331 122235555555555555565555
No 60
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1e-28 Score=211.61 Aligned_cols=148 Identities=18% Similarity=0.170 Sum_probs=134.2
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
+.+.++||.|+..|+.++++.|++.+..+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 68 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEND------LNQGDDHGFS-PLHWACREGRSAVVEMLIMRGARIN-------VM 68 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSC------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccc------ccccCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCC-------Cc
Confidence 34789999999999999999999986542 5568899999 9999999999999999999999987 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t 140 (179)
T 3f6q_A 69 NRGDDTPLHLAASHGHRDIVQKLLQYKADIN---AVNEHGNVPLHYACFWGQDQVAEDLVA-----NGALVSICNKYGEM 140 (179)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCSSBCCTTSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCcchhccCCCC
Confidence 6669999999999999999999999999998 999999999999999999999999998 68899999999999
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
|||+|+..++
T Consensus 141 pl~~A~~~~~ 150 (179)
T 3f6q_A 141 PVDKAKAPLR 150 (179)
T ss_dssp GGGGSCHHHH
T ss_pred cHHHHHHHHH
Confidence 9999998774
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.9e-29 Score=211.02 Aligned_cols=147 Identities=16% Similarity=0.168 Sum_probs=134.5
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.|+||.|+..|+.++++.|++.+.. .....+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~------~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 71 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSV------NCRDIEGRQST-PLHFAAGYNRVSVVEYLLQHGADVH-------AK 71 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTT------TCCCTTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CC
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCC------CccccccCCCC-HHHHHHHcChHHHHHHHHhcCCCCC-------cc
Confidence 4478999999999999999999986553 14567888999 9999999999999999999999987 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|.+|.|
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t 143 (165)
T 3twr_A 72 DKGGLVPLHNACSYGHYEVAELLVKHGAVVN---VADLWKFTPLHEAAAKGKYEICKLLLQ-----HGADPTKKNRDGNT 143 (165)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCC
Confidence 6679999999999999999999999999998 999999999999999999999999998 68899999999999
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
|||+|+. |+
T Consensus 144 ~l~~a~~-~~ 152 (165)
T 3twr_A 144 PLDLVKD-GD 152 (165)
T ss_dssp TGGGSCT-TC
T ss_pred hhHhHhc-CC
Confidence 9999876 65
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=2.4e-29 Score=236.66 Aligned_cols=147 Identities=13% Similarity=0.067 Sum_probs=125.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc---HHHHHHHHHcC-CCCCCCCCCcc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA---AELVELFVKKD-CTIKGVPNHKK 176 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~---~~iv~~Ll~~g-~~~~~~~~~~~ 176 (357)
|.||||+||..|+.++|++|++.+++ ++..|..|.| |||+|+..|+ .++++.|++.+ ++++
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad-------~n~~d~~g~T-pLh~A~~~g~~~~~~~~~~ll~~~~~~~~------- 195 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSN-------RLYGDNMGES-CLVKAVKSVNNYDSGTFEALLDYLYPCLI------- 195 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTBCCTTCCC-HHHHHHHSSHHHHTTCHHHHHHHHGGGGG-------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHhcccccHHHHHHHHHhhhcccc-------
Confidence 77999999999999999999999998 7889999999 9999999998 78888888886 4554
Q ss_pred CCCcCcchHHHHHHH----CCCHHHHHHHHhhCC--------------------Ccc----------------------c
Q 039985 177 DKNWAIRLTLLFAAS----NGITEILKEIIHQHP--------------------QAI----------------------L 210 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~----~G~~~iv~~Ll~~~~--------------------~~~----------------------~ 210 (357)
.+|..|+||||+|+. .|+.+++++|++.+. +++ .
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~ 275 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 275 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC
Confidence 566779999999999 999999999998743 211 0
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcC
Q 039985 211 LDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMK 267 (357)
Q Consensus 211 ~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g 267 (357)
++.+|..|+||||+|+..|+.++|++|++ .+++++.+|.+|+||||+|++.|
T Consensus 276 ~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-----~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 276 LNAQDSNGDTCLNIAARLGNISIVDALLD-----YGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHHHH-----TTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHhcC
Confidence 13788899999999999999999999987 68889999999999999998765
No 63
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.2e-28 Score=223.12 Aligned_cols=162 Identities=15% Similarity=0.210 Sum_probs=133.3
Q ss_pred CCCCCHHHHHH---hcCCHHHHHHHHhcCcc--hhHHHhh--hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC
Q 039985 99 PANISTISLGL---GKGNMLKAKKLVDFSAG--ELDELLL--KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 99 ~~g~t~Lh~A~---~~g~~~~vk~Ll~~~~~--~~~~~l~--~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
..|.||||+|+ ..|+.+++++|++.++. ....++. ....|..|.| |||+|+..|+.++|++|+++|++++..
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQT-ALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBC-HHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCC-HHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 34999999999 78999999999998764 1111111 2234558999 999999999999999999999998733
Q ss_pred CCC-------ccCCCcCcchHHHHHHHCCCHHHHHHHHh---hCCCcccccccCCCCChHHHHHHHcCC---------HH
Q 039985 172 PNH-------KKDKNWAIRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVAVKRRQ---------YK 232 (357)
Q Consensus 172 ~~~-------~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~d~~G~TpLh~A~~~g~---------~~ 232 (357)
... ....+..|.||||+||..|+.++|++|++ +|++++ .+|..|+||||+|+..++ .+
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~---~~d~~g~TpLh~A~~~~~~~~~~~~~~~~ 199 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR---RQDSRGNTVLHALVAIADNTRENTKFVTK 199 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---CCCTTSCCHHHHHHHHCCSSHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc---ccCCCCCcHHHHHHHhccCchhHHHHHHH
Confidence 210 00111469999999999999999999999 899998 999999999999999888 79
Q ss_pred HHHHHHhhhccCCcccc-------ccccCCCCcHHHHHHHcCCC
Q 039985 233 VFELITKEMQLSVPKWA-------SRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 233 iv~~Ll~~~~~~~~~~~-------~~~d~~G~TpLh~Aa~~g~~ 269 (357)
++++|++ .++++ +.+|..|+||||+|+..|+.
T Consensus 200 ~v~~Ll~-----~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 200 MYDLLLI-----KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHHHHHH-----HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHH-----hCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 9999988 45666 78999999999999999973
No 64
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=4.1e-28 Score=221.56 Aligned_cols=162 Identities=17% Similarity=0.189 Sum_probs=133.8
Q ss_pred CCCCCCHHHHHHhc---CCHHHHHHHHhcCcc--hhHHHhhh--hhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 039985 98 SPANISTISLGLGK---GNMLKAKKLVDFSAG--ELDELLLK--KDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKG 170 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~---g~~~~vk~Ll~~~~~--~~~~~l~~--~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~ 170 (357)
+..|.||||+|+.. |+.+++++|++.++. .+..++.. ...|..|.| |||+|+..|+.++|++|+++|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~t-pL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQT-ALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCC-HHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 34599999999987 999999999998765 11111111 225678999 99999999999999999999999873
Q ss_pred CCCC-------ccCCCcCcchHHHHHHHCCCHHHHHHHHh---hCCCcccccccCCCCChHHHHHHHcCC---------H
Q 039985 171 VPNH-------KKDKNWAIRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVAVKRRQ---------Y 231 (357)
Q Consensus 171 ~~~~-------~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~d~~G~TpLh~A~~~g~---------~ 231 (357)
.... ....+..|.||||+|+..|+.++|++|++ +|++++ .+|..|+||||+|+..|+ .
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~---~~d~~g~tpLh~A~~~~~~~~~~~~~~~ 206 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS---ARDSVGNTVLHALVEVADNTVDNTKFVT 206 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---CCCTTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce---eeCCCCCcHHHHHHHccCcchhHHHHHH
Confidence 3220 00112369999999999999999999999 899998 999999999999999998 7
Q ss_pred HHHHHHHhhhccCCccccc-------cccCCCCcHHHHHHHcCC
Q 039985 232 KVFELITKEMQLSVPKWAS-------RIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 232 ~iv~~Ll~~~~~~~~~~~~-------~~d~~G~TpLh~Aa~~g~ 268 (357)
+++++|++ .+++++ .+|.+|+||||+|+..|+
T Consensus 207 ~~v~~Ll~-----~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 207 SMYNEILI-----LGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HHHHHHHH-----HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHH-----hhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 99999988 456665 599999999999999997
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.3e-29 Score=226.81 Aligned_cols=145 Identities=8% Similarity=0.025 Sum_probs=132.4
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~ga~~n-------~~d 84 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMND-------PSQPNEEGIT-ALHNAICGANYSIVDFLITAGANVN-------SPD 84 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CCC
Confidence 377899999999999999999999988 7789999999 9999999999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHH--HHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVA--VKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
..|+||||+||..|+.+++++|+++|++++ .+| ..|+||||+| +..|+.+++++|++ .+++++.+|..|
T Consensus 85 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-----~ga~~~~~~~~~ 156 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTVICMALVQHGAAIF---ATTLSDGATAFEKCDPYREGYADCATYLAD-----VEQSMGLMNSGA 156 (229)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-----HHHHTTTSGGGE
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---cccCCCCCCHHHHHHHHhcChHHHHHHHHH-----cCCCcccccCCc
Confidence 679999999999999999999999999998 665 7999999999 99999999999998 567888888889
Q ss_pred CcHHHHHHHcC
Q 039985 257 YTLLHHVADMK 267 (357)
Q Consensus 257 ~TpLh~Aa~~g 267 (357)
.||||.++...
T Consensus 157 ~~~l~~~~~~~ 167 (229)
T 2vge_A 157 VYALWDYSAEF 167 (229)
T ss_dssp EEESSCBCCSS
T ss_pred hHHHHHHhhcc
Confidence 99988665544
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.3e-28 Score=223.41 Aligned_cols=178 Identities=13% Similarity=0.086 Sum_probs=156.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~ 179 (357)
+.+++|.|+..|+.+.++.+++...+ ...+..|.+|.| |||+|+..|+.++|++|++.|+ +++ .+|
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~-----~~~n~~d~~g~T-~Lh~A~~~g~~~~v~~Ll~~g~~~~~-------~~~ 142 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLD-----YVVNIADSNGNT-ALHYSVSHANFPVVQQLLDSGVCKVD-------KQN 142 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHH-----HHHTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTSCCCTT-------CCC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHh-----hcCcCCCCCCCC-HHHHHHHCCCHHHHHHHHHCCCCcCC-------CCC
Confidence 46788999999999999999887655 236678999999 9999999999999999999998 665 556
Q ss_pred cCcchHHHHHH-----HCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 180 WAIRLTLLFAA-----SNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 180 ~~G~TpLh~Aa-----~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
..|.||||+|+ ..|+.+++++|++.|.+.. ..|..|+||||+|+..|+.++|++|++ .++++|.+|.
T Consensus 143 ~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~---~~~~~g~tpLh~A~~~g~~~~v~~Ll~-----~gad~n~~d~ 214 (276)
T 4hbd_A 143 RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA---KASQAGQTALMLAVSHGRVDVVKALLA-----CEADVNVQDD 214 (276)
T ss_dssp TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC---CCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCT
T ss_pred CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHh-----CCCCCCCCCC
Confidence 66999999999 6799999999999998887 889999999999999999999999998 6889999999
Q ss_pred CCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCCHHHHHhhhh
Q 039985 255 KGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+|+||||+|+..|+. +.++.++. +.+.+.+|.+|. ||+++|....
T Consensus 215 ~G~TpLh~A~~~g~~-------------------~iv~~Ll~~~gad~~~~d~~g~-TpL~~A~~~g 261 (276)
T 4hbd_A 215 DGSTALMCACEHGHK-------------------EIAGLLLAVPSCDISLTDRDGS-TALMVALDAG 261 (276)
T ss_dssp TSCCHHHHHHHHTCH-------------------HHHHHHHTSTTCCTTCCCTTSC-CHHHHHHHHT
T ss_pred CCCCHHHHHHHCCCH-------------------HHHHHHHhcCCCCCcCcCCCCC-CHHHHHHHcC
Confidence 999999999999973 45666665 457889999999 9999997643
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.8e-27 Score=202.11 Aligned_cols=136 Identities=12% Similarity=0.117 Sum_probs=121.7
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 100 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLLEWGAD-------PHILAKERES-ALSLASTGGYTDIVGLLLERDVDIN-------IYDW 100 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------chhhcccCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------CCCC
Confidence 78999999999999999999999998 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+..+..++..|.||
T Consensus 101 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~-----~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 101 NGGTPLLYAVRGNHVKCVEALLARGADLT---TEADSGYTPMDLAVALGYRKVQQVIEN-----HILKLFQSNLVPADP 171 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHH-----HHHHHSCC-------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHhCcHHHHHHHHH-----HHHHHhcccCCCCCC
Confidence 79999999999999999999999999998 999999999999999999999999998 566788888888887
No 68
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=2.9e-28 Score=204.27 Aligned_cols=142 Identities=10% Similarity=0.051 Sum_probs=116.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+ .|+.+++++|+++|++++ .
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~-~~~~~~v~~Ll~~g~~~~-------~ 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN-------PNAPNSYGRR-PIQVMM-MGSARVAELLLLHGAEPN-------C 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCSSSCC-TTTSSC-TTCHHHHHHHHTTTCCCC-------C
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHH-cCCHHHHHHHHHcCCCCC-------C
Confidence 34589999999999999999999999988 7788999999 999995 899999999999999987 5
Q ss_pred CCcCcch-HHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 178 KNWAIRL-TLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 178 ~~~~G~T-pLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
+|..|.| |||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|
T Consensus 73 ~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g 144 (156)
T 1bi7_B 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD---VRDAWGRLPVDLAEELGHRDVARYLRA-----AAGGTRGSNHAR 144 (156)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS---CCCTTCCCHHHHHHHHTCHHHHHHHSS-----CC----------
T ss_pred cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHhCHHHHHHHHHH-----cCCCCCccCcCc
Confidence 6667999 9999999999999999999999998 999999999999999999999999977 789999999999
Q ss_pred CcHHHHH
Q 039985 257 YTLLHHV 263 (357)
Q Consensus 257 ~TpLh~A 263 (357)
.||.+-+
T Consensus 145 ~t~~~~~ 151 (156)
T 1bi7_B 145 IDAAEGP 151 (156)
T ss_dssp -------
T ss_pred CcccccC
Confidence 9998744
No 69
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.9e-28 Score=218.05 Aligned_cols=147 Identities=12% Similarity=-0.031 Sum_probs=105.8
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.|++.|+.++++.|++.+.+ .+ .+..|.| |||+|+..|+.++|++|++.|++++ .+|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~-------~~-~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~d 67 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMR-------VK-FNPLPLA-LLLDSSLEGEFDLVQRIIYEVDDPS-------LPN 67 (239)
T ss_dssp -----------------------------------------CHH-HHHHHHHHTCHHHHHHHTSTTSSCC-------CCC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCC-------cc-cCchhhH-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcC
Confidence 389999999999999999999999987 32 3467888 9999999999999999999999887 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC-c
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY-T 258 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~-T 258 (357)
..|.||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|. |
T Consensus 68 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~~~~t 139 (239)
T 1ycs_B 68 DEGITALHNAVCAGHTEIVKFLVQFGVNVN---AADSDGWTPLHCAASCNNVQVCKFLVE-----SGAAVFAMTYSDMQT 139 (239)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCSSSCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCcceecCCCCcc
Confidence 679999999999999999999999999998 999999999999999999999999998 6889999998887 9
Q ss_pred HHHHH--HHcCCCC
Q 039985 259 LLHHV--ADMKHYK 270 (357)
Q Consensus 259 pLh~A--a~~g~~~ 270 (357)
|||+| +..|+.+
T Consensus 140 ~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 140 AADKCEEMEEGYTQ 153 (239)
T ss_dssp HHHHCCSSSTTCCC
T ss_pred hHHHHHHhhhccHH
Confidence 99999 6667644
No 70
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.1e-26 Score=200.93 Aligned_cols=150 Identities=12% Similarity=0.045 Sum_probs=134.4
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
.+..|..|.| |||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|+++. .
T Consensus 28 ~n~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~ 96 (192)
T 2rfm_A 28 RNYRDSYNRT-PLMVACMLGMENAIDKLVENFDKLE-------DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN---T 96 (192)
T ss_dssp HTCCCTTCCC-HHHHHHHHTCGGGHHHHHHHHCCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT---C
T ss_pred HhCcCCCCCC-HHHHHHHcCCHHHHHHHHHhccccc-------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC---C
Confidence 4568999999 9999999999999999999999877 556669999999999999999999999999998 9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHH
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKE 293 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ 293 (357)
+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. +.++.
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-------------------~~v~~ 152 (192)
T 2rfm_A 97 KDFSGKTPLMWSIIFGYSEMSYFLLE-----HGANVNDRNLEGETPLIVASKYGRS-------------------EIVKK 152 (192)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSSCCCTTCCCHHHHHHHHTCH-------------------HHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-------------------HHHHH
Confidence 99999999999999999999999998 6889999999999999999999973 34555
Q ss_pred hcc-CcccccccccCCCCHHHHHhhhh
Q 039985 294 IMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 294 ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
++. ..+.+.+|..|. ||+++|....
T Consensus 153 Ll~~ga~~~~~~~~g~-t~l~~A~~~~ 178 (192)
T 2rfm_A 153 LLELGADISARDLTGL-TAEASARIFG 178 (192)
T ss_dssp HHHTTCCTTCBCTTSC-BHHHHHHHTT
T ss_pred HHHCCCCCCCcCCCCC-CHHHHHHHhC
Confidence 553 457888999999 9999997543
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.9e-26 Score=191.23 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=113.4
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 34 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 98 (153)
T 1awc_B 34 GTSPLHLAAQYGHFSTTEVLLRAGVS-------RDARTKVDRT-PLHMAASEGHANIVEVLLKHGADVN-------AKDM 98 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcChHHHHHHHHHcCCCCC-------CCCC
Confidence 77999999999999999999999988 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELI 237 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 237 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+.+|+.+++++|
T Consensus 99 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 99 LKMTALHWATEHNHQEVVELLIKYGADVH---TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 79999999999999999999999999998 9999999999999999999999987
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=5.2e-26 Score=192.17 Aligned_cols=151 Identities=11% Similarity=0.112 Sum_probs=131.5
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~ 219 (357)
.|.| |||.|+..|+.+++++|++.+++++ .+|..|.||||+|+..|+.+++++|+++|+++. .+|..|+
T Consensus 2 ~~~t-~L~~A~~~g~~~~v~~ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~ 70 (167)
T 3v31_A 2 ANSL-SVHQLAAQGEMLYLATRIEQENVIN-------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ---LLGKGRE 70 (167)
T ss_dssp TTCC-CHHHHHHTTCHHHHHHHHHHSSCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCC
T ss_pred CCcc-hHHHHHHCCCHHHHHHHHHcCCCcC-------CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CcCCCCC
Confidence 5788 9999999999999999999998876 566679999999999999999999999999998 8999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-Cc
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RH 298 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~ 298 (357)
||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. +.++.++. +.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-------------------~~v~~Ll~~g~ 126 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLD-----CGVDVNEYDWNGGTPLLYAVHGNHV-------------------KCVKMLLESGA 126 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHH-----HTCCTTCCCTTSCCHHHHHHHTTCH-------------------HHHHHHHHTTC
T ss_pred cHHHHHHHcCCHHHHHHHHH-----CCCCCCcCCCCCCCHHHHHHHcCCH-------------------HHHHHHHHcCC
Confidence 99999999999999999998 5789999999999999999999973 34555553 45
Q ss_pred ccccccccCCCCHHHHHhhh-hHHHHHHH
Q 039985 299 YAMHRDEKNKMTASDLFNLT-HEDQLRKA 326 (357)
Q Consensus 299 ~~~~~n~~g~~Tp~dl~~~~-~~~~~~~~ 326 (357)
+.+.+|.+|. ||+++|... +.+.++..
T Consensus 127 ~~~~~~~~g~-t~l~~A~~~~~~~~~~~L 154 (167)
T 3v31_A 127 DPTIETDSGY-NSMDLAVALGYRSVQQVI 154 (167)
T ss_dssp CTTCCCTTSC-CHHHHHHHHTCHHHHHHH
T ss_pred CCCCcCCCCC-CHHHHHHHcCcHHHHHHH
Confidence 7788999999 999999754 34444433
No 73
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=8.6e-27 Score=190.76 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=118.5
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+. |+.+++++|+++|++++
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~-~~~~~v~~Ll~~g~~~~----- 71 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGAD-------PNALNRFGRR-PIQVMMM-GSAQVAELLLLHGAEPN----- 71 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCT-TTTTSTT-SCHHHHHHHHHHTCCSS-----
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-------cCCcCCCCCC-HHHHHHc-CCHHHHHHHHHCCCCCC-----
Confidence 33455699999999999999999999999988 7788999999 9999999 99999999999999987
Q ss_pred ccCCCcC-cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 175 KKDKNWA-IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 175 ~~~~~~~-G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.+|.. |.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++.
T Consensus 72 --~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 72 --CADPATLTRPVHDAAREGFLDTLVVLHRAGARLD---VCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp --CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC---CCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred --CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 66777 8999999999999999999999999998 9999999999999999999999999874
No 74
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=5.5e-26 Score=192.80 Aligned_cols=121 Identities=15% Similarity=0.215 Sum_probs=115.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~~ 111 (169)
T 2y1l_E 47 GWTPLHLAAFNGHLEIVEVLLKNGAD-------VNAVDHAGMT-PLRLAALFGHLEIVEVLLKNGADVN-------ANDM 111 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCC
Confidence 77999999999999999999999988 7778999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++
T Consensus 112 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 112 EGHTPLHLAAMFGHLEIVEVLLKNGADVN---AQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 79999999999999999999999999998 999999999999999999999999976
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=3e-26 Score=192.32 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=114.4
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+. |+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 38 g~t~L~~A~~-~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 101 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIARRLLLRGAN-------PDLKDRTGFA-VIHDAARAGFLDTLQTLLEFQADVN-------IEDN 101 (162)
T ss_dssp SCCHHHHCCS-SCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CccHHHHHHc-CcHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCC
Confidence 7899999999 999999999999988 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.|.||||+|++.|+.+++++|+++|++.. +.+|..|+||||+|+..|+.+++++|++.
T Consensus 102 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNV--GHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHccCCCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 79999999999999999999999999964 49999999999999999999999999883
No 76
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.9e-27 Score=206.01 Aligned_cols=146 Identities=14% Similarity=0.062 Sum_probs=128.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcH----HHHHHHHHcCCCCCCCCCCcc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAA----ELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
++++||.|++.|+.+.++.++..+.... .+..|.| |||+|+..|+. +++++||++|++++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~--------~~~~g~T-~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn------- 69 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDK--------ESVLKSN-ILYDVLRNNNDEARYKISMFLINKGADIK------- 69 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCH--------HHHHTTT-HHHHHTTCSCHHHHHHHHHHHHHTTCCSS-------
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccc--------cccCCCC-HHHHHHHcCCcchHHHHHHHHHHCCCCCC-------
Confidence 5689999999999999999998776511 1257999 99999999975 59999999999998
Q ss_pred CCCcCcchHHHHHHHCCC------HHHHHHHHhhCCCcccccccCCCCC-hHHHHHHHcCC-----HHHHHHHHhhhccC
Q 039985 177 DKNWAIRLTLLFAASNGI------TEILKEIIHQHPQAILLDNLNEKEQ-NILHVAVKRRQ-----YKVFELITKEMQLS 244 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~------~~iv~~Ll~~~~~~~~~~~~d~~G~-TpLh~A~~~g~-----~~iv~~Ll~~~~~~ 244 (357)
.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+ ||||+|+..+. .+++++|+..
T Consensus 70 ~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin---~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~---- 142 (186)
T 3t8k_A 70 SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT---ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ---- 142 (186)
T ss_dssp CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS---SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS----
T ss_pred CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC---ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh----
Confidence 666779999999999997 688999999999999 9999999 99999999554 5699999873
Q ss_pred CccccccccCCCCcHHHHHHHcCCC
Q 039985 245 VPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 245 ~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.+++++.+|..|.||||+|++.|+.
T Consensus 143 ~gad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 143 SGLQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCH
Confidence 5789999999999999999999973
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.2e-27 Score=212.06 Aligned_cols=146 Identities=8% Similarity=-0.007 Sum_probs=130.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~d 100 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYEVDD-------PSLPNDEGIT-ALHNAVCAGHTEIVKFLVQFGVNVN-------AAD 100 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTSTTSS-------CCCCCTTSCC-HHHHHHHHTCHHHHHHHHHHTCCTT-------CCC
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccC
Confidence 478999999999999999999999987 7788999999 9999999999999999999999987 666
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC-hHHHHH--HHcCCHHHHHHHHhhhccCCcccccc-----
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ-NILHVA--VKRRQYKVFELITKEMQLSVPKWASR----- 251 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~-TpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~~~~----- 251 (357)
..|+||||+||..|+.++|++|+++|++++ .+|..|. ||||+| +..|+.+++++|+.. +++++.
T Consensus 101 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~-----~a~~~~~~~~~ 172 (239)
T 1ycs_B 101 SDGWTPLHCAASCNNVQVCKFLVESGAAVF---AMTYSDMQTAADKCEEMEEGYTQCSQFLYGV-----QEKMGIMNKGV 172 (239)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH-----HHHTTTTGGGE
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---eecCCCCcchHHHHHHhhhccHHHHHHHHHh-----hhcccccccce
Confidence 679999999999999999999999999998 7887776 999999 889999999999984 344443
Q ss_pred ----ccCCCCcHHHHHHHcCC
Q 039985 252 ----IDKKGYTLLHHVADMKH 268 (357)
Q Consensus 252 ----~d~~G~TpLh~Aa~~g~ 268 (357)
.|..|.|++++|...|.
T Consensus 173 ~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 173 IYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp EEESSCBCCSSTTBCCBCSSC
T ss_pred EEEEeccCCCCCCcccccCCC
Confidence 37788999999988886
No 78
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=3.4e-26 Score=187.16 Aligned_cols=124 Identities=13% Similarity=0.087 Sum_probs=116.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 75 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-------VNAKDEYGLT-PLYLATAHGHLEIVEVLLKNGADVN-------A 75 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------C
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------c
Confidence 34588999999999999999999999988 7778999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
+|..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++
T Consensus 76 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 76 VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN---AQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---CcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 66679999999999999999999999999998 999999999999999999999999986
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=5.5e-26 Score=191.63 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=129.9
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 215 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d 215 (357)
.|..|.| |||.|+..|+.++++.|++.+. ++. ..+..|.||||+|+..|+.+++++|+++|+++. .+|
T Consensus 4 ~~~~~~~-~l~~A~~~g~~~~v~~ll~~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~ 72 (165)
T 3twr_A 4 GNSEADR-QLLEAAKAGDVETVKKLCTVQSVNCR-------DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH---AKD 72 (165)
T ss_dssp --CHHHH-HHHHHHHHTCHHHHHHHCCTTTTTCC-------CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCC
T ss_pred CcchhhH-HHHHHHHhCCHHHHHHHHHcCCCCcc-------ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC---ccC
Confidence 3566778 9999999999999999998654 332 455568999999999999999999999999998 999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
..|+||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. +.++.++
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-------------------~~v~~Ll 128 (165)
T 3twr_A 73 KGGLVPLHNACSYGHYEVAELLVK-----HGAVVNVADLWKFTPLHEAAAKGKY-------------------EICKLLL 128 (165)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-------------------HHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHh-----CCCCCCCcCCCCCCHHHHHHHcCCH-------------------HHHHHHH
Confidence 999999999999999999999998 6889999999999999999999973 3455555
Q ss_pred c-CcccccccccCCCCHHHHHhhhhHHHHH
Q 039985 296 P-RHYAMHRDEKNKMTASDLFNLTHEDQLR 324 (357)
Q Consensus 296 ~-~~~~~~~n~~g~~Tp~dl~~~~~~~~~~ 324 (357)
. ..+.+.+|.+|+ ||++++.+.+.+.++
T Consensus 129 ~~ga~~~~~~~~g~-t~l~~a~~~~~~i~~ 157 (165)
T 3twr_A 129 QHGADPTKKNRDGN-TPLDLVKDGDTDIQD 157 (165)
T ss_dssp HTTCCTTCCCTTSC-CTGGGSCTTCHHHHH
T ss_pred HcCCCCcccCCCCC-ChhHhHhcCChHHHH
Confidence 3 347888999999 999999876665443
No 80
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=9.6e-26 Score=192.98 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=124.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~d~ 103 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRGAR-------INVMNRGDDT-PLHLAASHGHRDIVQKLLQYKADIN-------AVNE 103 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCC
Confidence 78999999999999999999999998 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++.+++++|++ .+++++..+..+
T Consensus 104 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~tpl~~A~~~~~~~~~~~L~~-----~g~~~~~~~~~~ 171 (179)
T 3f6q_A 104 HGNVPLHYACFWGQDQVAEDLVANGALVS---ICNKYGEMPVDKAKAPLRELLRERAEK-----MGQNLNRIPYKD 171 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSS---BCCTTSCCGGGGSCHHHHHHHHHHHHH-----TTCCCSCBCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCcc---hhccCCCCcHHHHHHHHHHHHHHHHHH-----hhcCcccCCccc
Confidence 79999999999999999999999999998 999999999999999999999999988 677777776554
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=3.8e-25 Score=177.05 Aligned_cols=123 Identities=19% Similarity=0.262 Sum_probs=115.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.++++.|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~ 65 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-------VNAKDKNGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKD 65 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-------CCCcCCCCCc-HHHHHHHcCcHHHHHHHHHcCCCCc-------ccC
Confidence 389999999999999999999999887 6778999999 9999999999999999999999887 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++.
T Consensus 66 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 66 KNGRTPLHLAARNGHLEVVKLLLEAGADVN---AKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 669999999999999999999999999998 9999999999999999999999999873
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=6.6e-26 Score=189.87 Aligned_cols=143 Identities=8% Similarity=0.008 Sum_probs=111.9
Q ss_pred hhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCccccccc
Q 039985 135 KDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNL 214 (357)
Q Consensus 135 ~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~ 214 (357)
...+..|.| |||+|+..|+.++|++|+++|++++ .++..|.||||+|+ .|+.+++++|+++|++++ .+
T Consensus 6 ~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~---~~ 73 (156)
T 1bi7_B 6 GSSMEPSAD-WLATAAARGRVEEVRALLEAGANPN-------APNSYGRRPIQVMM-MGSARVAELLLLHGAEPN---CA 73 (156)
T ss_dssp ----CCSTT-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC---CC
T ss_pred cCCCccchH-HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC---Cc
Confidence 456788999 9999999999999999999999887 55667999999986 999999999999999998 99
Q ss_pred CCCCCh-HHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHH
Q 039985 215 NEKEQN-ILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKE 293 (357)
Q Consensus 215 d~~G~T-pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ 293 (357)
|..|+| |||+|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+. +.++.
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~v~~ 129 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHR-----AGARLDVRDAWGRLPVDLAEELGHR-------------------DVARY 129 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHH-----HTCCSSCCCTTCCCHHHHHHHHTCH-------------------HHHHH
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHhCHH-------------------HHHHH
Confidence 999999 9999999999999999998 6789999999999999999999973 45666
Q ss_pred hcc-CcccccccccCCCCHHHH
Q 039985 294 IMP-RHYAMHRDEKNKMTASDL 314 (357)
Q Consensus 294 ll~-~~~~~~~n~~g~~Tp~dl 314 (357)
++. +.+.+.+|..|. ||.+-
T Consensus 130 Ll~~ga~~~~~~~~g~-t~~~~ 150 (156)
T 1bi7_B 130 LRAAAGGTRGSNHARI-DAAEG 150 (156)
T ss_dssp HSSCC-----------------
T ss_pred HHHcCCCCCccCcCcC-ccccc
Confidence 664 347888999999 88763
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=3.2e-25 Score=181.40 Aligned_cols=118 Identities=8% Similarity=0.028 Sum_probs=110.9
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
.+..+..|.| |||+|+..|+.+++++|+++|++++ .+|..|+||||+|+. |+.+++++|+++|++++ .
T Consensus 5 ~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~---~ 72 (136)
T 1d9s_A 5 IHMLGGSSDA-GLATAAARGQVETVRQLLEAGADPN-------ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN---C 72 (136)
T ss_dssp CSCCCCCCSC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS---C
T ss_pred ccCCCCCCcc-HHHHHHHcCCHHHHHHHHHcCCCcC-------CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC---C
Confidence 4567899999 9999999999999999999999887 556679999999999 99999999999999998 8
Q ss_pred cCCC-CChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 214 LNEK-EQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 214 ~d~~-G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+|.. |+||||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..|+
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHR-----AGARLDVCDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHH-----TCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCCCCCCHHHHHHHcCC
Confidence 9999 9999999999999999999998 688999999999999999999997
No 84
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2e-25 Score=207.72 Aligned_cols=140 Identities=14% Similarity=0.092 Sum_probs=120.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhh------cCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKD------CTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~------~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~ 171 (357)
+.++||.|+..|+.+.++.|++.+.+ .+. .+..|.| |||+|+.. |+.++|++|+++|++++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d-------~~~~~~~~~~~~~g~t-~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-- 220 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD-------FGQPLPGPDAQAPEEL-VLHLAVKVANQASLPLVDFIIQNGGHLD-- 220 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC-------TTSCEECSSSCSCEEC-HHHHHHHTCCTTTHHHHHHHHHHSSCTT--
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc-------ccccCCCcccCCCCcc-HHHHHHHhcccCcHHHHHHHHhcCCCCC--
Confidence 44679999999999999999999887 444 5889999 99999997 89999999999999987
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
.+|..|.||||+|+..|+.++|++|+++|+++. .+|..|+||||+|+..|+.+++++|++. +++
T Consensus 221 -----~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~---~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-----ga~--- 284 (301)
T 2b0o_E 221 -----AKAADGNTALHYAALYNQPDCLKLLLKGRALVG---TVNEAGETALDIARKKHHKECEELLEQA-----QAG--- 284 (301)
T ss_dssp -----CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS---CCCTTSCCHHHHHHHHTCHHHHHHHHHH-----HHH---
T ss_pred -----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHh-----cCC---
Confidence 566679999999999999999999999999998 9999999999999999999999999884 332
Q ss_pred ccCCCCcHHHHHHHcCCC
Q 039985 252 IDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 252 ~d~~G~TpLh~Aa~~g~~ 269 (357)
.|.||||+|+..|+.
T Consensus 285 ---~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ---TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---TTSSCCC--------
T ss_pred ---CCCChhHHHHhcCCc
Confidence 689999999999863
No 85
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.6e-24 Score=180.73 Aligned_cols=123 Identities=11% Similarity=0.150 Sum_probs=114.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+ +..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 33 ~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 96 (156)
T 1bd8_A 33 NRFGKTALQV-MMFGSTAIALELLKQGAS-------PNVQDTSGTS-PVHDAARTGFLDTLKVLVEHGADVN-------V 96 (156)
T ss_dssp CTTSCCHHHH-SCTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCSC-------C
T ss_pred CCCCCcHHHH-HHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCC-------C
Confidence 3459999999 999999999999999998 7788999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
+|..|.||||+|+..|+.+++++|+++ +++. .+|..|+||||+|+..|+.+++++|+++
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~---~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 97 PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH---RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT---CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 666799999999999999999999999 8887 9999999999999999999999999863
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=1.4e-26 Score=208.82 Aligned_cols=166 Identities=14% Similarity=0.107 Sum_probs=126.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.++++.++..|+.+.++.+..... ..+..|.| |||+|+..|+.++|++|++ |++++ .+|.
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~----------~~~~~g~t-~L~~A~~~g~~~~v~~Ll~-~~~~~-------~~d~ 75 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAA----------DVVSEYET-PWWTAARKADEQALSQLLE-DRDVD-------AVDE 75 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCH----------HHHHHHHH-HHHHHHTTTCHHHHHHTTT-TCCTT-------CBCT
T ss_pred CccHHHHHHHcCCCccccccccccc----------ccccCCCC-HHHHHHHcCCHHHHHHHHc-CCCCC-------CcCC
Confidence 3455555555555544333332222 23456778 9999999999999999998 77776 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.|+||||+||..|+.++|++|+++|++++ .+| ..|+||||+|+..|+.+++++|+. .+++++.+|..|+||
T Consensus 76 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~t~ 147 (244)
T 3ui2_A 76 NGRTALLFVAGLGSDKCVRLLAEAGADLD---HRDMRGGLTALHMAAGYVRPEVVEALVE-----LGADIEVEDERGLTA 147 (244)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTT---CCCSSSCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCC---cCCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCcH
Confidence 68999999999999999999999998887 666 779999999999999999999987 678888899999999
Q ss_pred HHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc
Q 039985 260 LHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP 296 (357)
Q Consensus 260 Lh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~ 296 (357)
||+|+..++.. ...++|+.+...+..+.++.++.
T Consensus 148 l~~A~~~~~~~---~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 148 LELAREILKTT---PKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HHHHHHHHTTC---CCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc---CCCCHHHHHHHcChHHHHHHHHH
Confidence 99998877642 45588988888877777666653
No 87
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=4.7e-25 Score=189.69 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=122.4
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN- 215 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d- 215 (357)
.+..|.| |||+|+..|+.+++++|++ |++++ .+|..|+||||+||..|+.+++++|+++|++++ .+|
T Consensus 40 ~~~~g~t-~L~~A~~~g~~~~v~~Ll~-~~~~~-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~ 107 (183)
T 3deo_A 40 VVSEYET-PWWTAARKADEQALSQLLE-DRDVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGADLD---HRDM 107 (183)
T ss_dssp HHHHHHH-HHHHHHHTTCHHHHHHHTT-TSCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCS
T ss_pred CCCCCCC-HHHHHHHcCCHHHHHHHHh-cCCCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cCCC
Confidence 4567888 9999999999999999999 88877 566679999999999999999999999999998 777
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
..|+||||+|+..|+.+++++|++ .+++++.+|.+|+||||+|++.++.. ...++|+.+...+..+.++.+.
T Consensus 108 ~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~~~---~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 108 RGGLTALHMAAGYVRPEVVEALVE-----LGADIEVEDERGLTALELAREILKTT---PKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCCCTTSCCHHHHHHHHHHTC---CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcCcHHHHHHHHH-----cCCCCcCCCCCCCCHHHHHHHhccCc---ccccHHHHHHHcCHHHHHHHHH
Confidence 899999999999999999999998 67899999999999999999988753 4457888888877766655543
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.4e-24 Score=177.55 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=107.8
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 216 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~ 216 (357)
....|.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+||..|+.+++++|+++|++++ .+|.
T Consensus 10 ~~~~~~t-~l~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~ 78 (136)
T 2jab_A 10 HGSDLGK-KLLEAARAGQDDEVRILMANGADVN-------AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN---AVDA 78 (136)
T ss_dssp --CHHHH-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCT
T ss_pred ccccccH-HHHHHHHhCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cCCC
Confidence 4556777 9999999999999999999999987 556679999999999999999999999999998 8999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 217 KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 217 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.|+||||+|+..|+.+++++|++ .+++++.+|.+|+||||+|+..|+.
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLK-----HGADVNAQDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-----cCCCCcCcCCCCCCHHHHHHHCCCH
Confidence 99999999999999999999998 6789999999999999999999973
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=7.6e-25 Score=179.13 Aligned_cols=117 Identities=13% Similarity=0.091 Sum_probs=109.6
Q ss_pred hcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC
Q 039985 136 DCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 215 (357)
Q Consensus 136 ~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d 215 (357)
..|..|.| |||+|+..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+++++|+++|+++. .+|
T Consensus 5 ~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~ 73 (137)
T 3c5r_A 5 FTNHRGET-LLHIASIKGDIPSVEYLLQNGSDPN-------VKDHAGWTPLHEACNHGHLKVVELLLQHKALVN---TTG 73 (137)
T ss_dssp CCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSC-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCC
T ss_pred CcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc---CcC
Confidence 46889999 9999999999999999999999887 566679999999999999999999999999998 999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
..|+||||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..+.
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLS-----YGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHhhccH
Confidence 999999999999999999999998 688999999999999999987664
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=4.8e-25 Score=180.32 Aligned_cols=124 Identities=14% Similarity=0.130 Sum_probs=114.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~ 71 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSD-------PNVKDHAGWT-PLHEACNHGHLKVVELLLQHKALVN-------T 71 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------C
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCcCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCccc-------C
Confidence 44599999999999999999999999988 7788999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
+|..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++.+++++|.+
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN---AVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 66679999999999999999999999999998 999999999999999999888888754
No 91
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=9.6e-25 Score=175.26 Aligned_cols=113 Identities=13% Similarity=0.116 Sum_probs=100.9
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 69 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED-------VNRTLEGGRK-PLHYAADCGQLEILEFLLLKGADIN-------AP 69 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC-------TTSCCTTSSC-HHHHHHHTTCHHHHHHHHTTTCCTT-------CC
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC-------cCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCC-------cC
Confidence 4578999999999999999999999887 6778899999 9999999999999999999999887 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcC
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRR 229 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g 229 (357)
|..|+||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..+
T Consensus 70 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 70 DKHHITPLLSAVYEGHVSCVKLLLSKGADKT---VKGPDGLTAFEATDNQA 117 (123)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHhCCHH
Confidence 6679999999999999999999999999988 89999999999994433
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=5.5e-26 Score=217.61 Aligned_cols=145 Identities=10% Similarity=-0.011 Sum_probs=117.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.||||+|++.|+.++|++|++.++.+.. ....+..|.| |||+|+..|+.++|++|+++|++....... .+
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~----~~~~~~~~~t-pL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~--~~-- 162 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEI----VKVIQAENYQ-AFRLAAENGHLHVLNRLCELAPTEIMAMIQ--AE-- 162 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSS----CC--CHHHHH-HHHHHHHTTCHHHHHHHHHSCTTTHHHHHS--HH--
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHH----HHHhccCCCC-HHHHHHHcCCHHHHHHHHhCCCCccccccC--CC--
Confidence 56999999999999999999999873100 1234556788 999999999999999999999753200000 22
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccc--cCCCCChHHHHHH-HcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDN--LNEKEQNILHVAV-KRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~--~d~~G~TpLh~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+.||||+||..|+.++|++|+++|+++. . .|..|+||||+|+ .+|+.++|++|++. +. .|.
T Consensus 163 -~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~---~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-----ga-------~~~ 226 (376)
T 2aja_A 163 -NYHAFRLAAENGHLHVLNRLCELAPTEA---TAMIQAENYYAFRWAAVGRGHHNVINFLLDC-----PV-------MLA 226 (376)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHSCGGGH---HHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-----HH-------HHH
T ss_pred -CCCHHHHHHHCCCHHHHHHHHHcCCccc---hhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-----CC-------ccc
Confidence 3899999999999999999999999987 6 8899999999999 99999999999873 22 389
Q ss_pred cHHHHHHHcCCCC
Q 039985 258 TLLHHVADMKHYK 270 (357)
Q Consensus 258 TpLh~Aa~~g~~~ 270 (357)
||||+|+..|+.+
T Consensus 227 taL~~Aa~~g~~e 239 (376)
T 2aja_A 227 YAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHCTTTTTTTT
T ss_pred hHHHHHHHCCCHH
Confidence 9999999999876
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=4e-24 Score=171.59 Aligned_cols=113 Identities=15% Similarity=0.070 Sum_probs=102.9
Q ss_pred CCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCC
Q 039985 138 TNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEK 217 (357)
Q Consensus 138 ~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~ 217 (357)
+..|.| |||+|+..|+.+++++|++.|++++ .+|..|+||||+||..|+.+++++|+++|++++ .+|..
T Consensus 4 ~~~~~~-~l~~A~~~~~~~~v~~ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~~ 72 (123)
T 3aaa_C 4 GSMCDK-EFMWALKNGDLDEVKDYVAKGEDVN-------RTLEGGRKPLHYAADCGQLEILEFLLLKGADIN---APDKH 72 (123)
T ss_dssp ---CHH-HHHHHHHTTCHHHHHHHHHTTCCTT-------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCTT
T ss_pred ccccch-HHHHHHHcCCHHHHHHHHHcCCCcC-------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCC
Confidence 456778 9999999999999999999999877 556669999999999999999999999999998 99999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHc
Q 039985 218 EQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADM 266 (357)
Q Consensus 218 G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~ 266 (357)
|+||||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLS-----KGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHhCCH
Confidence 9999999999999999999998 6789999999999999999543
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=1.3e-24 Score=192.34 Aligned_cols=121 Identities=12% Similarity=0.112 Sum_probs=93.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK-DCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~ 179 (357)
|.||||+||..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.++|++|++. |++++ .+|
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~g~~~~-------~~d 137 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVG-------VNGLDKAGST-ALYWACHGGHKDIVEMLFTQPNIELN-------QQN 137 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHTTSTTCCCC-------CCC
T ss_pred cccccccccccCcHHHHHHHHhCCCC-------ccccCCCCCC-HHHHHHHcCCHHHHHHHHcCCCCCcc-------ccC
Confidence 57888888888888888888887776 6667778888 88888888888888888887 77766 555
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
..|+||||+|+..|+.++|++|+++|+++. .+|..|+||||+|+..|+.++++.|+.
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTD---LRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSC---CCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---cccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 568888888888888888888888888877 778888888888888888888887766
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=2.6e-24 Score=193.90 Aligned_cols=129 Identities=9% Similarity=0.049 Sum_probs=116.3
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.++++.|++ +.+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~ 107 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD-------VDAVDENGRT-ALLFVAGLGSDKCVRLLAEAGADLD-------HRD 107 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC-------TTCBCTTSCB-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC-------CCCcCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------cCC
Confidence 48899999999999999999999 776 7778999999 9999999999999999999999987 333
Q ss_pred -cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 180 -WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 180 -~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..+ .+..+.|
T Consensus 108 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~t~l~~A~~~~----------------------~~~~~~~ 162 (244)
T 3ui2_A 108 MRGGLTALHMAAGYVRPEVVEALVELGADIE---VEDERGLTALELAREIL----------------------KTTPKGN 162 (244)
T ss_dssp SSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHHH----------------------TTCCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCcHHHHHHHHH----------------------hccCCCC
Confidence 459999999999999999999999999998 99999999999998622 1256899
Q ss_pred HHHHHHHcCCC
Q 039985 259 LLHHVADMKHY 269 (357)
Q Consensus 259 pLh~Aa~~g~~ 269 (357)
|||+|+..|+.
T Consensus 163 ~l~~a~~~g~~ 173 (244)
T 3ui2_A 163 PMQFGRRIGLE 173 (244)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHcChH
Confidence 99999999973
No 96
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.6e-24 Score=187.54 Aligned_cols=121 Identities=13% Similarity=0.078 Sum_probs=112.2
Q ss_pred CCCHHHHHHhcCCH----HHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc------HHHHHHHHHcCCCCCC
Q 039985 101 NISTISLGLGKGNM----LKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA------AELVELFVKKDCTIKG 170 (357)
Q Consensus 101 g~t~Lh~A~~~g~~----~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~------~~iv~~Ll~~g~~~~~ 170 (357)
|.||||+|+.+|+. +++++|++.|++ ++..|..|+| |||+|+..|+ .++|++|+++|++++
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-------vn~~d~~g~T-pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin- 108 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGAD-------IKSRTKEGTT-LFFPLFQGGGNDITGTTELCKIFLEKGADIT- 108 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-------SSCCCTTCCC-THHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCC-------CCCCCCCCCc-HHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-
Confidence 99999999999986 489999999999 8889999999 9999999987 689999999999998
Q ss_pred CCCCccCCCcCcc-hHHHHHHHCC-----CHHHHHHHHh-hCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 171 VPNHKKDKNWAIR-LTLLFAASNG-----ITEILKEIIH-QHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 171 ~~~~~~~~~~~G~-TpLh~Aa~~G-----~~~iv~~Ll~-~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.+|..|. ||||+|+..| +.+++++|++ +|++++ .+|..|+||||+|+..|+.++|++|+.
T Consensus 109 ------~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~---~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 109 ------ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL---IKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp ------SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT---CCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred ------ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc---ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6777799 9999999955 4579999999 999998 999999999999999999999999987
No 97
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2e-23 Score=166.92 Aligned_cols=114 Identities=23% Similarity=0.282 Sum_probs=106.9
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~ 219 (357)
+|.| |||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|+++. .+|..|+
T Consensus 1 ~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~ 69 (126)
T 1n0r_A 1 NGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN---AKDKNGR 69 (126)
T ss_dssp CCCC-HHHHHHHHTCHHHHHHHHHHTCCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSC
T ss_pred CCcc-HHHHHHHcCcHHHHHHHHHcCCCCC-------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc---ccCCCCC
Confidence 4889 9999999999999999999999887 555669999999999999999999999999998 9999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLE-----AGADVNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cHHHHHHHcChHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHcCcH
Confidence 99999999999999999998 6789999999999999999999973
No 98
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=3.9e-24 Score=191.09 Aligned_cols=134 Identities=10% Similarity=-0.049 Sum_probs=109.3
Q ss_pred HHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHH
Q 039985 117 AKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITE 196 (357)
Q Consensus 117 vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~ 196 (357)
++.|++.+.... ..+..+..|.| |||+|+..|+.++|++|++.|++++ .+|..|+||||+||..|+.+
T Consensus 1 v~~ll~~~~~~~----~~~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~d~~g~tpLh~A~~~g~~~ 68 (229)
T 2vge_A 1 MRSVLRKAGSPR----KARRARLNPLV-LLLDAALTGELEVVQQAVKEMNDPS-------QPNEEGITALHNAICGANYS 68 (229)
T ss_dssp ---------CCC----CCCCTTSCHHH-HHHHHHHHTCHHHHHHHHHHSSCTT-------CCCTTSCCHHHHHHHTTCHH
T ss_pred CeehhccCCCCc----cccccccchhH-HHHHHHHcCCHHHHHHHHhcCCCCC-------CCCCCCCCHHHHHHHcCCHH
Confidence 356777766500 02234556677 9999999999999999999999887 56667999999999999999
Q ss_pred HHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc-CCCCcHHHHH--HHcCCCC
Q 039985 197 ILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID-KKGYTLLHHV--ADMKHYK 270 (357)
Q Consensus 197 iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~A--a~~g~~~ 270 (357)
+|++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+| .+|+||||+| +..|+.+
T Consensus 69 ~v~~Ll~~ga~~n---~~d~~g~tpLh~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 69 IVDFLITAGANVN---SPDSHGWTPLHCAASCNDTVICMALVQ-----HGAAIFATTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp HHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCTTCCCSSTTCCTGGGCCTTSTTHHH
T ss_pred HHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCcccccCCCCCCHHHHHHHHhcChHH
Confidence 9999999999998 999999999999999999999999987 688999987 6999999999 8887643
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=5.5e-24 Score=183.00 Aligned_cols=128 Identities=9% Similarity=0.060 Sum_probs=115.3
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.++++.|++ +.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-------~~~~d~~g~t-~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~ 106 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD-------VDAVDENGRT-ALLFVAGLGSDKCVRLLAEAGADLD-------HRD 106 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------cCC
Confidence 48899999999999999999999 776 6778999999 9999999999999999999999987 333
Q ss_pred -cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 180 -WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 180 -~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
..|+||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++. ..+.|
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~----------------------~~~~~ 161 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGADIE---VEDERGLTALELAREILKT----------------------TPKGN 161 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTSCCHHHHHHHHHHT----------------------CCCCS
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc---CCCCCCCCHHHHHHHhccC----------------------ccccc
Confidence 459999999999999999999999999998 9999999999999874321 35789
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
||++|+..|+
T Consensus 162 ~l~~a~~~~~ 171 (183)
T 3deo_A 162 PMQFGRRIGL 171 (183)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHcCH
Confidence 9999999886
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=9.5e-24 Score=186.77 Aligned_cols=118 Identities=9% Similarity=0.063 Sum_probs=109.5
Q ss_pred hhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhh-CCCcccccc
Q 039985 135 KDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQ-HPQAILLDN 213 (357)
Q Consensus 135 ~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~-~~~~~~~~~ 213 (357)
...+..|.| |||+|+..|+.++|++|++.|++++ .+|..|+||||+||..|+.++|++|+++ |++++ .
T Consensus 67 ~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~---~ 135 (222)
T 3ehr_A 67 AEQAESIDN-PLHEAAKRGNLSWLRECLDNRVGVN-------GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN---Q 135 (222)
T ss_dssp HHHEEEESC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC---C
T ss_pred ccccccccc-ccccccccCcHHHHHHHHhCCCCcc-------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc---c
Confidence 345778899 9999999999999999999999987 5666799999999999999999999999 88888 9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+|..|+||||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..|+
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLA-----KGARTDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHH-----HTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCccccCCCCCHHHHhcchhH
Confidence 99999999999999999999999998 678999999999999999998775
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=5.6e-23 Score=196.14 Aligned_cols=149 Identities=11% Similarity=0.039 Sum_probs=115.6
Q ss_pred CCCCHHHHHHhc-CCHHHHHHHHhcCcchhHHHhhhhhcC--CCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 100 ANISTISLGLGK-GNMLKAKKLVDFSAGELDELLLKKDCT--NKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 100 ~g~t~Lh~A~~~-g~~~~vk~Ll~~~~~~~~~~l~~~~~~--~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+.|+||.|+.. |+.++++.|++.+++ .+..+ ..|.| |||+|+..|+.++|++|+++|++++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-------vn~~~~~~~g~T-pLh~Aa~~g~~~iv~~LL~~Gadvn------- 262 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-------VNWVNGGQDNAT-PLIQATAANSLLACEFLLQNGANVN------- 262 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-------TTCCCTTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-------CCccccccCCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------
Confidence 456899999999 999999999999998 56666 89999 9999999999999999999999988
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.+|..|+||||+|+..|+.++|++|+++|+++. .+|..|+||||+|+..|+.+++++|+.... ........+..+
T Consensus 263 ~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~---~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~--~~~~~~~~~~~~ 337 (368)
T 3jue_A 263 QADSAGRGPLHHATILGHTGLACLFLKRGADLG---ARDSEGRDPLTIAMETANADIVTLLRLAKM--REAEAAQGQAGD 337 (368)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC---CcCCCCCCHHHHHHHCCCHHHHHHHHHcCC--CcccccccCCCC
Confidence 566679999999999999999999999999998 999999999999999999999999987532 344555667788
Q ss_pred CcHHHHHHHcCC
Q 039985 257 YTLLHHVADMKH 268 (357)
Q Consensus 257 ~TpLh~Aa~~g~ 268 (357)
.|+|+++.....
T Consensus 338 ~t~l~i~~~~~~ 349 (368)
T 3jue_A 338 ETYLDIFRDFSL 349 (368)
T ss_dssp ------------
T ss_pred CCHHHHHHHHHh
Confidence 999988876653
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.6e-22 Score=200.64 Aligned_cols=135 Identities=14% Similarity=0.106 Sum_probs=113.8
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhc------CCCCCcHHHHHHHh---cCcHHHHHHHHHcCCCCCCCC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDC------TNKGNMIKAKKFVD---FSAAELVELFVKKDCTIKGVP 172 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~------~~~g~t~pLh~A~~---~g~~~iv~~Ll~~g~~~~~~~ 172 (357)
.+.||.|+..|+.+.++.|++.+++ .+.. +..|.| |||+|+. .|+.++|++||++|++++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~-------~n~~~~~~~~~~~g~t-~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn--- 201 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD-------FGQPLPGPDAQAPEEL-VLHLAVKVANQASLPLVDFIIQNGGHLD--- 201 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC-------SSSCBCCSSSCCSCBC-HHHHHHHTCCTTTHHHHHHHHHHSCCTT---
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc-------ccCCCCCcccccccch-HHHHHHHhcccccHHHHHHHHHcCCCCC---
Confidence 3679999999999999999999987 4444 889999 9999966 999999999999999988
Q ss_pred CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc
Q 039985 173 NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI 252 (357)
Q Consensus 173 ~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 252 (357)
.+|..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.
T Consensus 202 ----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~~~~~Ll~-----~ga~~~~- 268 (497)
T 3lvq_E 202 ----AKAADGNTALHYAALYNQPDCLKLLLKGRALVG---TVNEAGETALDIARKKHHKECEELLEQ-----AQAGTFA- 268 (497)
T ss_dssp ----CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TCC-----
T ss_pred ----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHH-----hCCCCCC-
Confidence 666779999999999999999999999999998 999999999999999999999999998 5666655
Q ss_pred cCCCCcHHHHHHH
Q 039985 253 DKKGYTLLHHVAD 265 (357)
Q Consensus 253 d~~G~TpLh~Aa~ 265 (357)
||+|.+..
T Consensus 269 -----~~~h~~~~ 276 (497)
T 3lvq_E 269 -----FPLHVDYS 276 (497)
T ss_dssp -------------
T ss_pred -----Ccceeecc
Confidence 57776654
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=9.1e-23 Score=187.55 Aligned_cols=127 Identities=13% Similarity=0.143 Sum_probs=113.6
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.++||.|+..|+.+.++.+++.+.+ ++..+.....+..|.| |||+|+.. |+.++|++|+++|++++ .+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~-~~~~~~l~~~~~~g~t-~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-------~~ 201 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVD-LTEKIPLANGHEPDET-ALHLAVRSVDRTSLHIVDFLVQNSGNLD-------KQ 201 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTSBCCCSSCSSTTCB-HHHHHHHHCCTTTHHHHHHHHHHCSCTT-------CC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcc-hhhhccccccccCCCC-cchHHHHhcccchHHHHHHHHHCCCCcc-------cc
Confidence 4689999999999999999999887 1111113345789999 99999999 89999999999999988 66
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
|..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++.
T Consensus 202 d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 202 TGKGSTALHYCCLTDNAECLKLLLRGKASIE---IANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6679999999999999999999999999998 9999999999999999999999999885
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.6e-21 Score=148.62 Aligned_cols=90 Identities=20% Similarity=0.290 Sum_probs=83.8
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~ 219 (357)
+|+| |||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|+++. .+|..|+
T Consensus 1 ~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~n-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~ 69 (93)
T 1n0q_A 1 NGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN---AKDKNGR 69 (93)
T ss_dssp --CC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSC
T ss_pred CCCc-HHHHHHHcCCHHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCC
Confidence 4788 9999999999999999999999987 666679999999999999999999999999998 9999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhh
Q 039985 220 NILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
||||+|+..|+.+++++|++.
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999999999873
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=5.9e-22 Score=156.83 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=99.6
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 216 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~ 216 (357)
.|.+|.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+++. .+|.
T Consensus 5 ~d~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~d~ 73 (115)
T 2l6b_A 5 GSKDGNT-PLHNAAKNGHAEEVKKLLSKGADVN-------ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN---ARSK 73 (115)
T ss_dssp CSCSSCC-HHHHHHHHTCHHHHHHHTTTTCCSS-------CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT---CCCT
T ss_pred cCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc---ccCC
Confidence 6889999 9999999999999999999999887 556669999999999999999999999999998 9999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 217 KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 217 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.|+||||+|+..|+.+++++|++ .++++|.++..|.||
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~-----~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDA-----KGADVNARSWGSSHH 111 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHT-----TSSSHHHHSCCCC--
T ss_pred CCCCHHHHHHHCCCHHHHHHHHH-----cCCCCCcCCcccccc
Confidence 99999999999999999999987 789999999999998
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=3e-21 Score=147.10 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=86.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~n~~d~~g~t-~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~d~ 66 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-------VNAKDKNGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKDK 66 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCC
Confidence 88999999999999999999999998 7889999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCC
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQ 207 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~ 207 (357)
.|.||||+|+..|+.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 799999999999999999999999975
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=2.5e-21 Score=180.01 Aligned_cols=115 Identities=15% Similarity=0.036 Sum_probs=104.0
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHC---CCHHHHHHHHhhCCCcccccccCCCCChH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEKEQNI 221 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~d~~G~Tp 221 (357)
+|+.|+..|+.+.|+.|++.|++++...... ..+..|.||||+|+.. |+.+++++|+++|++++ .+|..|+||
T Consensus 154 ~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~-~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn---~~d~~G~Tp 229 (301)
T 2b0o_E 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD---AKAADGNTA 229 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCEECS-SSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT---CCCTTCCCH
T ss_pred HHhhhhhccCHHHHHHHHhcCCcccccCCCc-ccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC---CCCCCCCCH
Confidence 7999999999999999999999987321110 1456699999999997 89999999999999998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 222 LHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 222 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..|+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~-----~gad~~~~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLK-----GRALVGTVNEAGETALDIARKKHH 271 (301)
T ss_dssp HHHHHHTTCHHHHHHHHH-----TTCCCSCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCC
Confidence 999999999999999998 688999999999999999999997
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=5.3e-21 Score=182.47 Aligned_cols=145 Identities=11% Similarity=-0.010 Sum_probs=108.0
Q ss_pred CCCcHHHHHHHhc-CcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC
Q 039985 140 KGNMIKAKKFVDF-SAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 218 (357)
Q Consensus 140 ~g~t~pLh~A~~~-g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G 218 (357)
.+.| +||+|+.. |+.+++++|+++|++++... .+..|.||||+||..|+.++|++|+++|++++ .+|..|
T Consensus 198 ~~~t-~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~-----~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn---~~d~~G 268 (368)
T 3jue_A 198 HPGA-LLFRASGHPPSLPTMADALAHGADVNWVN-----GGQDNATPLIQATAANSLLACEFLLQNGANVN---QADSAG 268 (368)
T ss_dssp CHHH-HHHHHTSSSCCHHHHHHHHHTTCCTTCCC-----TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTS
T ss_pred CCCc-HHHHHHHccCCHHHHHHHHHcCCCCCccc-----cccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 4456 99999999 99999999999999987322 11459999999999999999999999999998 999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc--
Q 039985 219 QNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-- 296 (357)
Q Consensus 219 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-- 296 (357)
+||||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..|+.+ .++.|+.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~-----~Gad~~~~d~~G~TpL~~A~~~g~~~-------------------iv~lLl~~~ 324 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLK-----RGADLGARDSEGRDPLTIAMETANAD-------------------IVTLLRLAK 324 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCHH-------------------HHHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHH-----CcCCCCCcCCCCCCHHHHHHHCCCHH-------------------HHHHHHHcC
Confidence 999999999999999999998 68899999999999999999999732 2222221
Q ss_pred --CcccccccccCCCCHHHHHhhh
Q 039985 297 --RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 297 --~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
.......+..+. |+++++..-
T Consensus 325 ~~~~~~~~~~~~~~-t~l~i~~~~ 347 (368)
T 3jue_A 325 MREAEAAQGQAGDE-TYLDIFRDF 347 (368)
T ss_dssp C-----------------------
T ss_pred CCcccccccCCCCC-CHHHHHHHH
Confidence 123345566788 999988643
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=2.1e-22 Score=192.72 Aligned_cols=169 Identities=10% Similarity=-0.026 Sum_probs=127.3
Q ss_pred CCHHHHHHh-cCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 102 ISTISLGLG-KGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 102 ~t~Lh~A~~-~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
.+++++|+. .++.++++++++.+.. +.| |||+|+..|+.++|++|+++|+..... . ..+.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~--------------~~T-~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~-~---~~~~ 126 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIK--------------SEV-ICFVAAITGCSSALDTLCLLLTSDEIV-K---VIQA 126 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCC--------------HHH-HHHHHHHHCCHHHHHHHTTC--CCSSC-C-----CH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCC--------------cCC-HHHHHHHcCCHHHHHHHHHcCCcHHHH-H---Hhcc
Confidence 367888776 5778888888877665 346 999999999999999999998832211 1 2334
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc--ccCCCCc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR--IDKKGYT 258 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~--~d~~G~T 258 (357)
.|.||||+||+.|+.++|++|+++|++....+..+.+ +||||+||.+|+.++|++|++ .+++++. +|.+|.|
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~-----~ga~~~~~~~d~~g~T 200 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE-----LAPTEATAMIQAENYY 200 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH-----SCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH-----cCCccchhccCCCCCC
Confidence 5899999999999999999999999863200133333 999999999999999999998 6778777 8999999
Q ss_pred HHHHHH-HcCCCCCC----C---CCCChhHHHHHhhhHHHHHHhc
Q 039985 259 LLHHVA-DMKHYKEG----T---RPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 259 pLh~Aa-~~g~~~~~----~---~~~t~L~la~~l~~~~~v~~ll 295 (357)
|||+|+ ..|+.+.. . .+.|||+.|...+..+.++.++
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHHHH
Confidence 999999 99986521 1 1226777777666666555555
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=2.1e-20 Score=185.50 Aligned_cols=116 Identities=15% Similarity=0.038 Sum_probs=105.4
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHH---CCCHHHHHHHHhhCCCcccccccCCCCChH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAAS---NGITEILKEIIHQHPQAILLDNLNEKEQNI 221 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~---~G~~~iv~~Ll~~~~~~~~~~~~d~~G~Tp 221 (357)
.||.|+..|+.++|+.||+.|++++...... ..+..|.||||+||. .|+.++|++|+++|++++ .+|..|+||
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~-~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn---~~d~~g~Tp 210 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD---AKAADGNTA 210 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSSCBCCS-SSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT---CCCSSSCCH
T ss_pred HHHHHHhccCHHHHHHHHhhcccccCCCCCc-ccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC---ccCCCCCcH
Confidence 8999999999999999999999987432211 346679999999966 999999999999999998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 222 LHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 222 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
||+|+..|+.++|++|++ .+++++.+|.+|+||||+|+..|+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLK-----GRALVGTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp HHHHTTTTCHHHHHHHHH-----TCCCCSCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 999999999999999998 7899999999999999999999984
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=4.1e-20 Score=169.79 Aligned_cols=162 Identities=11% Similarity=0.019 Sum_probs=126.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcc----------hhH---H----HhhhhhcCCC-------CCcHHHHHHHhcC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAG----------ELD---E----LLLKKDCTNK-------GNMIKAKKFVDFS 153 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~----------~~~---~----~l~~~~~~~~-------g~t~pLh~A~~~g 153 (357)
+.++.+.|+.+...||..+.+.+...-+. ... . .......... ..+ +|+.|+..|
T Consensus 63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~-~l~~a~~~~ 141 (278)
T 1dcq_A 63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLH-SLCEAVKTR 141 (278)
T ss_dssp SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHH-HHHHHHHTT
T ss_pred CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhh-hhhhHhhhc
Confidence 34577899999999998775555322111 000 0 0000011111 124 899999999
Q ss_pred cHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHC---CCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCC
Q 039985 154 AAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQ 230 (357)
Q Consensus 154 ~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~ 230 (357)
+.+.++.+++.|+++...... +..+..|.||||+||.. |+.+++++|+++|++++ .+|..|+||||+|+..|+
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l-~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in---~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPL-ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD---KQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCC-SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT---CCCTTCCCHHHHHHHTTC
T ss_pred ccHHHHHHHHhhcchhhhccc-cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc---ccCCCCCCHHHHHHHcCC
Confidence 999999999999986533211 13456699999999999 99999999999999998 999999999999999999
Q ss_pred HHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 231 YKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 231 ~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.++|++|++ .+++++.+|.+|.||||+|+..|+.
T Consensus 218 ~~~v~~Ll~-----~gad~~~~d~~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 218 AECLKLLLR-----GKASIEIANESGETPLDIAKRLKHE 251 (278)
T ss_dssp HHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHH-----cCCCCCCccCCCCCHHHHHHHcCCH
Confidence 999999998 7889999999999999999999973
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=8e-21 Score=150.26 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=97.8
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------~~~~d~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~------- 69 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-------VNARSKDGNT-PLHLAAKNGHAEIVKLLLAKGADVN------- 69 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-------SSCCCSSSCC-TTHHHHTTTCHHHHHHHTTTTCCTT-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCc-------
Confidence 345699999999999999999999999988 7778999999 9999999999999999999999987
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHH
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 222 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpL 222 (357)
.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.||-
T Consensus 70 ~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n---~~~~~~~~~~ 112 (115)
T 2l6b_A 70 ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN---ARSWGSSHHH 112 (115)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH---HHSCCCC---
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---cCCccccccc
Confidence 566679999999999999999999999999998 8899999873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=2.8e-19 Score=140.65 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=83.7
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
....|.+|.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+||..|+.+++++|+++|+++. .
T Consensus 17 ~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~i~-------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~---~ 85 (110)
T 2zgd_A 17 GSHMGSDLGK-KLLEAARAGQDDEVRILMANGADVA-------AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX---A 85 (110)
T ss_dssp -----CCHHH-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---C
T ss_pred ccccCCccch-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---c
Confidence 3456788999 9999999999999999999999887 556679999999999999999999999999998 9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHH
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELI 237 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~L 237 (357)
+|..|+||||+|+..|+.+++++|
T Consensus 86 ~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=6.4e-18 Score=132.85 Aligned_cols=91 Identities=10% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.|+||+|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------i~~~d~~g~t-pLh~A~~~~~~~~v~~Ll~~ga~~~------ 84 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGAD-------VAAKDKNGST-PLHLAARNGHLEVVKLLLEAGADVX------ 84 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT------
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCC-------CCccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcc------
Confidence 3455699999999999999999999999988 7778999999 9999999999999999999999987
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHH
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEI 201 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~L 201 (357)
.+|..|.||||+|+..|+.+++++|
T Consensus 85 -~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 85 -AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 5666799999999999999999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=25.27 E-value=50 Score=19.70 Aligned_cols=18 Identities=28% Similarity=0.274 Sum_probs=12.9
Q ss_pred HHHHHHHCCCHHHHHHHH
Q 039985 185 TLLFAASNGITEILKEII 202 (357)
Q Consensus 185 pLh~Aa~~G~~~iv~~Ll 202 (357)
-+..||+.|+.+.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 356678888888877764
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=21.47 E-value=3.3e+02 Score=22.09 Aligned_cols=23 Identities=9% Similarity=0.023 Sum_probs=16.6
Q ss_pred HHHHHHHcCCHHHHHHHHhhhcc
Q 039985 221 ILHVAVKRRQYKVFELITKEMQL 243 (357)
Q Consensus 221 pLh~A~~~g~~~iv~~Ll~~~~~ 243 (357)
+...|-.+|..++.+.++...++
T Consensus 121 A~~~A~t~g~~~~a~~~~~~~~~ 143 (177)
T 3mkq_B 121 AYAVAKANGDEAAASAFLEQAEV 143 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHcCcHHHHHHHHHHhCC
Confidence 45667778888888888776543
Done!