BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039987
(105 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|218201738|gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
Length = 897
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCK--GCGAFKWDDDRKSS 56
+S N + C C VLRT++T N RKF+KC+ CG F W+DD ++S
Sbjct: 767 SSGNASGQVHCTSC-GEPCVLRTANTEANRGRKFYKCQDPSCGFFAWEDDVENS 819
>gi|297721829|ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa Japonica Group]
Length = 928
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCK--GCGAFKWDDD 52
+S N + C C VLRT++T N RKF+KC+ CG F W+DD
Sbjct: 798 SSGNASGQVQCTSC-REPCVLRTANTEANRGRKFYKCQNLACGFFAWEDD 846
>gi|15221941|ref|NP_175890.1| GRF zinc finger / Zinc knuckle protein [Arabidopsis thaliana]
gi|9857519|gb|AAG00874.1|AC064840_5 Hypothetical protein [Arabidopsis thaliana]
gi|12322160|gb|AAG51116.1|AC069144_13 hypothetical protein [Arabidopsis thaliana]
gi|332195043|gb|AEE33164.1| GRF zinc finger / Zinc knuckle protein [Arabidopsis thaliana]
Length = 353
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 27 TSHTRENPNRKFWKCKGCGAFKWDD 51
TS T +NPNR+F+ C CG FKW D
Sbjct: 51 TSKTEKNPNRRFYTCPSCGYFKWCD 75
>gi|225466079|ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245024 [Vitis vinifera]
gi|296084189|emb|CBI24577.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 24 VLRTSHTRENPNRKFWKCK------GCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDI 76
++ TS+T++NP RKF+KC GCG F+W D+ S ND G ++ ++ + D+
Sbjct: 103 LILTSNTQKNPGRKFYKCPLREENGGCGFFQWCDN-SSGISNDAFGAINPGLNSSFPDL 160
>gi|218192151|gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indica Group]
Length = 981
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 24 VLRTSHTRENPNRKFWKCK--GCGAFKWDDDRKSS 56
VLRT++T N RKF+KC+ CG F W+DD ++S
Sbjct: 871 VLRTANTEANRGRKFYKCQNLACGFFAWEDDVENS 905
>gi|357469237|ref|XP_003604903.1| hypothetical protein MTR_4g021240 [Medicago truncatula]
gi|355505958|gb|AES87100.1| hypothetical protein MTR_4g021240 [Medicago truncatula]
Length = 168
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 2 SFSTSD-NRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCGA------FKWDDD 52
S S D NR + CEK + S+T ENP RKFW+C+ GA F WDD+
Sbjct: 8 SISNHDGNRPPICGCEKVMK----MWISNTDENPKRKFWRCRFSGAEYSCELFIWDDE 61
>gi|242032759|ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
gi|241917628|gb|EER90772.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
Length = 366
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCK----GCGAFKWDDDRKSSEC 58
+ +D + + KAC C + ++ TS+T +NP RKF+KC GC F+W D +
Sbjct: 128 YVNADMKVEDKACP-CGAGTCLVLTSNTLKNPGRKFYKCPTRDGGCNFFEWCDAPSPAPA 186
Query: 59 NDFRGMV 65
N MV
Sbjct: 187 NARNNMV 193
>gi|222624247|gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japonica Group]
Length = 983
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 24 VLRTSHTRENPNRKFWKCK--GCGAFKWDDD 52
VLRT++T N RKF+KC+ CG F W+DD
Sbjct: 871 VLRTANTEANRGRKFYKCQNLACGFFAWEDD 901
>gi|357113918|ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
Length = 924
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 6 SDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCK--GCGAFKWDDD 52
S N + C C + + RT++T N RKF+KC+ GCG F W+D+
Sbjct: 798 SRNASGQVLCTTC-GEACISRTANTEANRGRKFYKCQDSGCGFFAWEDE 845
>gi|108711440|gb|ABF99235.1| GRF zinc finger family protein, expressed [Oryza sativa Japonica
Group]
Length = 405
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 13 KACEKCFNSSKVLRTSHTRENPNRKFWKCK-----GCGAFKWDDDRKSSECN 59
KAC C S ++ TS+T NP RKF++C GC F+W D+ N
Sbjct: 161 KAC-PCGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNYFEWCDNPSPGPAN 211
>gi|332308942|ref|YP_004442830.1| polyprotein [Banana streak UL virus]
gi|331029459|gb|AEC49881.1| polyprotein [Banana streak UL virus]
Length = 1833
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 24 VLRTSHTRENPNRKFWKC--KGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEV 81
+LRTS T +PNR+FW C K C A+ W D+ + N+ + R ++E D E+
Sbjct: 1745 MLRTSMTSRSPNRQFWNCAEKRCHAWWWYDNLEGYIKNEVDKRLQRILAEQ--DEEFEEL 1802
Query: 82 CKLGHQME 89
C++ ++E
Sbjct: 1803 CEIYKELE 1810
>gi|242036831|ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
gi|241919664|gb|EER92808.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
Length = 860
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 15 CEKCFNSSKVLRTSHTRENPNRKFWKCK--GCGAFKWDDD 52
C C ++ + T++T N RKF+KC+ GCG FKW+D+
Sbjct: 750 CTSC-GAACISLTANTEANRGRKFYKCQDPGCGFFKWEDE 788
>gi|414873229|tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea mays]
Length = 369
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 13 KACEKCFNSSKVLRTSHTRENPNRKFWKCK----GCGAFKWDDDRKSSECNDFRGMV 65
KAC C S ++ TS+T +NP RKF+KC GC F+W D + N MV
Sbjct: 144 KACP-CGVGSCLVLTSNTPKNPGRKFYKCPMRDGGCNFFEWCDAPSPAPANARNNMV 199
>gi|15237561|ref|NP_201197.1| DNA topoisomerase III [Arabidopsis thaliana]
gi|8777305|dbj|BAA96895.1| DNA topoisomerase III [Arabidopsis thaliana]
gi|169218912|gb|ACA50279.1| topoisomerase 3 alpha [Arabidopsis thaliana]
gi|332010433|gb|AED97816.1| DNA topoisomerase III [Arabidopsis thaliana]
Length = 926
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 14 ACEKCFNSSKVLRTSHTRENPNRKFWKC--KGCGAFKWDDDRKSSECN 59
+C C S VLRT++T N R+F+ C +GC F W+D +S N
Sbjct: 805 SCNTC-GSQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGN 851
>gi|297853464|ref|XP_002894613.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340455|gb|EFH70872.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 352
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 25 LRTSHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKID 75
+ TS T +NPNR+F+ C C FKW D+ +C F+ D + E ++D
Sbjct: 49 ILTSKTEKNPNRRFYTCPSCKFFKW-CDQGFGDCGFFKWEDDSLLHETELD 98
>gi|75214630|gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
Length = 369
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 6/39 (15%)
Query: 24 VLRTSHTRENPNRKFWKCK------GCGAFKWDDDRKSS 56
++ TS+T++NP RKF+KC GCG F+W D +SS
Sbjct: 100 LILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSS 138
>gi|332308937|ref|YP_004442827.1| polyprotein [Banana streak UI virus]
gi|331029454|gb|AEC49877.1| polyprotein [Banana streak UI virus]
Length = 1837
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 24 VLRTSHTRENPNRKFWKC--KGCGAFKWDD 51
VL+ S T +NP R+FW C + C A+ WDD
Sbjct: 1748 VLKISQTSKNPGRRFWTCEQRKCHAWWWDD 1777
>gi|414864981|tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
Length = 915
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 24 VLRTSHTRENPNRKFWKCK--GCGAFKWDDD 52
+ R ++T N R+F+KC+ GCG FKW+D+
Sbjct: 813 ISRIANTEANRGRRFYKCQDPGCGFFKWEDE 843
>gi|195504934|ref|XP_002099292.1| GE23447 [Drosophila yakuba]
gi|194185393|gb|EDW99004.1| GE23447 [Drosophila yakuba]
Length = 2109
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 28 SHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEVCKLGHQ 87
SH +P+R+F + CG + D+R +S+C D VD ++ + L+ +V +L +
Sbjct: 1493 SHRLLSPSRRFSPSRSCGDY---DNRSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLERE 1549
Query: 88 MECYSLKFQLFEKELQ 103
+ Y + +K+LQ
Sbjct: 1550 KDDYKSQLGAAKKQLQ 1565
>gi|194909958|ref|XP_001982044.1| GG11254 [Drosophila erecta]
gi|190656682|gb|EDV53914.1| GG11254 [Drosophila erecta]
Length = 2102
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 28 SHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEVCKLGHQ 87
SH +P+R+F + CG + D+R +S+C D VD ++ + L+ +V +L +
Sbjct: 1486 SHRLLSPSRRFSPSRSCGDY---DNRSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLERE 1542
Query: 88 MECYSLKFQLFEKELQ 103
+ Y + +K+LQ
Sbjct: 1543 KDDYKSQLGAAKKQLQ 1558
>gi|195331516|ref|XP_002032447.1| GM26559 [Drosophila sechellia]
gi|194121390|gb|EDW43433.1| GM26559 [Drosophila sechellia]
Length = 837
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 28 SHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEVCKLGHQ 87
SH +P+R+F + CG + D+R +S+C D VD ++ + L+ +V +L +
Sbjct: 224 SHRLLSPSRRFSPSRSCGDY---DNRSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLERE 280
Query: 88 MECYSLKFQLFEKELQ 103
+ Y + +K+LQ
Sbjct: 281 KDDYKSQLGAAKKQLQ 296
>gi|28571853|ref|NP_651216.2| rootletin [Drosophila melanogaster]
gi|28381445|gb|AAF56238.3| rootletin [Drosophila melanogaster]
Length = 2048
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 28 SHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEVCKLGHQ 87
SH +P+R+F + CG + D+R +S+C D VD ++ + L+ +V +L +
Sbjct: 1435 SHRLLSPSRRFSPSRSCGDY---DNRSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLERE 1491
Query: 88 MECYSLKFQLFEKELQ 103
+ Y + +K+LQ
Sbjct: 1492 KDDYKSQLGAAKKQLQ 1507
>gi|224105439|ref|XP_002313812.1| predicted protein [Populus trichocarpa]
gi|222850220|gb|EEE87767.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 25 LRTSHTRENPNRKFWKCK-------GCGAFKWDDD 52
+ TS+T +NP RKF+ C CG FKW DD
Sbjct: 92 VSTSNTVKNPGRKFYACPVDQRTSGSCGFFKWSDD 126
>gi|353240125|emb|CCA72008.1| hypothetical protein PIIN_05943 [Piriformospora indica DSM 11827]
Length = 276
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 24 VLRTSHTRENPNRKFWKCK--GCGAFKWDD 51
V R SHT+ENP+R F+ C GC + W D
Sbjct: 30 VQRISHTKENPDRPFYTCATGGCNFWTWAD 59
>gi|21429746|gb|AAM50551.1| AT16851p [Drosophila melanogaster]
Length = 1230
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 28 SHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEVCKLGHQ 87
SH +P+R+F + CG + D+R +S+C D VD ++ + L+ +V +L +
Sbjct: 617 SHRLLSPSRRFSPSRSCGDY---DNRSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLERE 673
Query: 88 MECYSLKFQLFEKELQ 103
+ Y + +K+LQ
Sbjct: 674 KDDYKSQLGAAKKQLQ 689
>gi|401840624|gb|EJT43369.1| APN2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 520
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
Query: 24 VLRTSHTRENPNRKFWKCK-----------GCGAFKW 49
+LRTS T NP +KFW CK CG F+W
Sbjct: 483 ILRTSKTSTNPGKKFWICKRSRGDSSNTESSCGFFQW 519
>gi|218193864|gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indica Group]
Length = 384
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 13 KACEKCFNSSKVLRTSHTRENPNRKFWKCK-----GCGAFKWDDDRKSSECN 59
KAC C S ++ TS+T NP RKF++C GC F+W D+ N
Sbjct: 161 KAC-PCGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNYFEWCDNPSPGPAN 211
>gi|449438355|ref|XP_004136954.1| PREDICTED: uncharacterized protein LOC101219463 [Cucumis sativus]
gi|449438357|ref|XP_004136955.1| PREDICTED: uncharacterized protein LOC101219463 [Cucumis sativus]
Length = 150
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 25 LRTSHTRENPNRKFWKC-----KGCGAFKWDDDRKSS 56
LR SHT + P R F+ C + CG F W D+R+ S
Sbjct: 22 LRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPS 58
>gi|115455777|ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group]
gi|50355715|gb|AAT75240.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|108711439|gb|ABF99234.1| GRF zinc finger family protein, expressed [Oryza sativa Japonica
Group]
gi|113549960|dbj|BAF13403.1| Os03g0786500 [Oryza sativa Japonica Group]
gi|215741242|dbj|BAG97737.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625927|gb|EEE60059.1| hypothetical protein OsJ_12863 [Oryza sativa Japonica Group]
Length = 384
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 13 KACEKCFNSSKVLRTSHTRENPNRKFWKCK-----GCGAFKWDDDRKSSECN 59
KAC C S ++ TS+T NP RKF++C GC F+W D+ N
Sbjct: 161 KAC-PCGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNYFEWCDNPSPGPAN 211
>gi|255719916|ref|XP_002556238.1| KLTH0H08250p [Lachancea thermotolerans]
gi|238942204|emb|CAR30376.1| KLTH0H08250p [Lachancea thermotolerans CBS 6340]
Length = 512
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 20 NSSKVLRTSHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFR 62
N + +LRTS T+ NP +KFW C D++ K + C+ F+
Sbjct: 471 NENAILRTSKTKNNPGKKFWACARPTG---DENNKEASCSFFQ 510
>gi|311253744|ref|XP_003125648.1| PREDICTED: PR domain zinc finger protein 14 [Sus scrofa]
Length = 571
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKKFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|357465305|ref|XP_003602934.1| hypothetical protein MTR_3g100540 [Medicago truncatula]
gi|355491982|gb|AES73185.1| hypothetical protein MTR_3g100540 [Medicago truncatula]
Length = 193
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 7/38 (18%)
Query: 25 LRTSHTRENPNRKFWKCKG-------CGAFKWDDDRKS 55
L S+T ENP RKFW+C+ C F WDD+ S
Sbjct: 28 LWVSNTDENPKRKFWRCRNFWENDYHCKLFIWDDELHS 65
>gi|431891831|gb|ELK02365.1| PR domain zinc finger protein 14 [Pteropus alecto]
Length = 557
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 466 MRVHSGDRPYQCVYCTKKFTASSILRT-HIRQHSGEKPFKCKHCG 509
>gi|194746480|ref|XP_001955708.1| GF16104 [Drosophila ananassae]
gi|190628745|gb|EDV44269.1| GF16104 [Drosophila ananassae]
Length = 2045
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 28 SHTRENPNRKFWKCKGCGAFKWDDDRKSSECNDFRGMVDRNMSENKIDILLGEVCKLGHQ 87
SH +P+R+F + CG + D R +S+C D VD ++ + L+ +V +L +
Sbjct: 1431 SHRLLSPSRRFSPSRSCGDY---DARSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLERE 1487
Query: 88 MECYSLKFQLFEKELQ 103
+ Y + +K+LQ
Sbjct: 1488 KDDYKSQLGAAKKQLQ 1503
>gi|156385057|ref|XP_001633448.1| predicted protein [Nematostella vectensis]
gi|156220518|gb|EDO41385.1| predicted protein [Nematostella vectensis]
Length = 296
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + + + CEK F +S +LRT H R++ K +KCK CG
Sbjct: 208 MRVHSGERPYKCPYCEKAFTASSILRT-HVRQHSGEKPFKCKHCG 251
>gi|301615309|ref|XP_002937124.1| PREDICTED: LOW QUALITY PROTEIN: PR domain zinc finger protein
14-like [Xenopus (Silurana) tropicalis]
Length = 589
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 15 CEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
C K F +S +LRT H R++ K +KCK CG
Sbjct: 459 CNKAFTASSILRT-HIRQHSGEKPFKCKHCG 488
>gi|297815424|ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 24 VLRTSHTRENPNRKFWKCK------GCGAFKWDDDRKSS 56
++ TS T +NP RKF+KC GCG F+W D +SS
Sbjct: 103 LVLTSTTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSS 141
>gi|402878450|ref|XP_003902896.1| PREDICTED: PR domain zinc finger protein 14 [Papio anubis]
Length = 571
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|109086648|ref|XP_001082029.1| PREDICTED: PR domain zinc finger protein 14 isoform 1 [Macaca
mulatta]
gi|297299558|ref|XP_002805420.1| PREDICTED: PR domain zinc finger protein 14 isoform 2 [Macaca
mulatta]
gi|355698011|gb|EHH28559.1| PR domain-containing protein 14 [Macaca mulatta]
Length = 571
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|440909890|gb|ELR59749.1| Zinc finger protein 621, partial [Bos grunniens mutus]
Length = 427
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKW 49
T + Q K C K F S K+ H R + K ++CK CG AFKW
Sbjct: 279 TGEKPYQCKECGKAF-SQKIASIQHQRVHTGEKPYECKVCGKAFKW 323
>gi|355779748|gb|EHH64224.1| PR domain-containing protein 14 [Macaca fascicularis]
Length = 571
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|426359872|ref|XP_004047181.1| PREDICTED: PR domain zinc finger protein 14 [Gorilla gorilla
gorilla]
Length = 571
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|13375636|ref|NP_078780.1| PR domain zinc finger protein 14 [Homo sapiens]
gi|114620439|ref|XP_519800.2| PREDICTED: PR domain zinc finger protein 14 [Pan troglodytes]
gi|397522682|ref|XP_003831387.1| PREDICTED: PR domain zinc finger protein 14 [Pan paniscus]
gi|17368925|sp|Q9GZV8.1|PRD14_HUMAN RecName: Full=PR domain zinc finger protein 14; AltName: Full=PR
domain-containing protein 14
gi|11643582|gb|AAG39635.1|AF319458_1 PR-domain containing protein 14 [Homo sapiens]
gi|10434076|dbj|BAB14120.1| unnamed protein product [Homo sapiens]
gi|119607368|gb|EAW86962.1| PR domain containing 14 [Homo sapiens]
Length = 571
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|297683056|ref|XP_002819213.1| PREDICTED: PR domain zinc finger protein 14 isoform 2 [Pongo
abelii]
Length = 571
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|30354491|gb|AAH52311.1| PR domain containing 14 [Homo sapiens]
gi|167773871|gb|ABZ92370.1| PR domain containing 14 [synthetic construct]
gi|313882442|gb|ADR82707.1| PR domain containing 14 [synthetic construct]
Length = 571
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>gi|365983476|ref|XP_003668571.1| hypothetical protein NDAI_0B02930 [Naumovozyma dairenensis CBS 421]
gi|343767338|emb|CCD23328.1| hypothetical protein NDAI_0B02930 [Naumovozyma dairenensis CBS 421]
Length = 556
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
Query: 24 VLRTSHTRENPNRKFWKCK-----------GCGAFKW 49
+LRTS T NP ++FW CK CG F+W
Sbjct: 519 ILRTSKTSSNPGKRFWICKKPRGDLNNPDASCGFFQW 555
>gi|297811507|ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319474|gb|EFH49896.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Query: 25 LRTSHTRENPNRKFWKC---KGCGAFKWDD 51
++ ++TRENP RKF+KC + C FKW D
Sbjct: 44 IKVANTRENPGRKFYKCPTAQNCKFFKWCD 73
>gi|358418105|ref|XP_003583842.1| PREDICTED: zinc finger protein 621-like [Bos taurus]
gi|359078191|ref|XP_003587670.1| PREDICTED: zinc finger protein 621-like [Bos taurus]
Length = 473
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKW 49
T + Q K C K F S K+ H R + K ++CK CG AFKW
Sbjct: 309 TGEKPYQCKECGKAF-SQKIASIQHQRVHTGEKPYECKVCGKAFKW 353
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.132 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,520,695,042
Number of Sequences: 23463169
Number of extensions: 52751364
Number of successful extensions: 142719
Number of sequences better than 100.0: 287
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 141646
Number of HSP's gapped (non-prelim): 1389
length of query: 105
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 32
effective length of database: 6,351,416,734
effective search space: 203245335488
effective search space used: 203245335488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)