BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039987
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GZV8|PRD14_HUMAN PR domain zinc finger protein 14 OS=Homo sapiens GN=PRDM14 PE=1
SV=1
Length = 571
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 480 MRVHSGDRPYQCVYCTKRFTASSILRT-HIRQHSGEKPFKCKYCG 523
>sp|P38207|APN2_YEAST DNA-(apurinic or apyrimidinic site) lyase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=APN2 PE=1
SV=1
Length = 520
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
Query: 24 VLRTSHTRENPNRKFWKCK-----------GCGAFKW 49
+L+TS T NP RKFW CK CG F+W
Sbjct: 483 MLKTSKTSANPGRKFWICKRSRGDSNNTESSCGFFQW 519
>sp|E9Q3T6|PRD14_MOUSE PR domain zinc finger protein 14 OS=Mus musculus GN=Prdm14 PE=1
SV=1
Length = 561
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M + D Q C K F +S +LRT H R++ K +KCK CG
Sbjct: 470 MRVHSGDRPYQCVYCTKKFTASSILRT-HIRQHSGEKPFKCKHCG 513
>sp|Q6ZSS3|ZN621_HUMAN Zinc finger protein 621 OS=Homo sapiens GN=ZNF621 PE=2 SV=1
Length = 439
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKW 49
T + Q K C K F + K+ H R + K ++CK CG AFKW
Sbjct: 286 TGEKPYQCKECGKAF-TQKIASIQHQRVHTGEKPYECKVCGKAFKW 330
>sp|Q68DY1|ZN626_HUMAN Zinc finger protein 626 OS=Homo sapiens GN=ZNF626 PE=2 SV=2
Length = 528
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFK 48
T + + + C K FN S +L T+H R + KF+KC+ CG AFK
Sbjct: 418 IHTGERPYKCEECGKAFNQSSIL-TTHRRIHTGEKFYKCEECGKAFK 463
>sp|Q86V71|ZN429_HUMAN Zinc finger protein 429 OS=Homo sapiens GN=ZNF429 PE=2 SV=2
Length = 674
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDD 51
T + + K C K FN S L TSH R + K +KC+ CG AF W
Sbjct: 308 TEEKPYKCKECGKAFNRSSTL-TSHKRIHTGEKPYKCEECGKAFNWSS 354
>sp|P17038|ZNF43_HUMAN Zinc finger protein 43 OS=Homo sapiens GN=ZNF43 PE=2 SV=4
Length = 809
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDD 51
T + + K C K FN S L T H + +P K +KC+ CG AF W
Sbjct: 281 TGEKFYKCKECAKAFNQSSNL-TEHKKIHPGEKPYKCEECGKAFNWPS 327
>sp|O75346|ZN253_HUMAN Zinc finger protein 253 OS=Homo sapiens GN=ZNF253 PE=2 SV=2
Length = 499
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDDD 52
T + + + C K F +S L T+H R + K +KC+ CG AF W D
Sbjct: 419 TGEKPYKCEECGKSFTASSTL-TTHKRIHTGEKPYKCEECGKAFNWSSD 466
>sp|Q8IYI8|ZN440_HUMAN Zinc finger protein 440 OS=Homo sapiens GN=ZNF440 PE=2 SV=1
Length = 595
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDDDRKSSE 57
T + + K C K F S+ LR H R + K ++CK CG AF++ ++ +S E
Sbjct: 391 TGEKPYECKQCGKAFRSASHLRV-HGRTHTGEKPYECKECGKAFRYVNNLQSHE 443
>sp|Q3SXZ3|ZN718_HUMAN Zinc finger protein 718 OS=Homo sapiens GN=ZNF718 PE=2 SV=1
Length = 478
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 15 CEKC---FNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDDD 52
CEKC FN S L H R + +K++KC+ CG AFKW
Sbjct: 257 CEKCGKAFNQSSTLNL-HKRIHSAQKYYKCEECGKAFKWSSS 297
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
T +N + C K FN S +L T H R + KF+KC+ CG
Sbjct: 192 IHTGENPYTCEECGKAFNWSSIL-TKHKRIHAREKFYKCEECG 233
>sp|Q7L945|ZN627_HUMAN Zinc finger protein 627 OS=Homo sapiens GN=ZNF627 PE=2 SV=1
Length = 461
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDDDRKSSE 57
T D + K C K F+ SK +R H R + K ++CK CG AF+ +S E
Sbjct: 246 TGDKPYECKQCGKAFSCSKYIRI-HERTHTGEKPYECKQCGKAFRCASSVRSHE 298
>sp|Q05516|ZBT16_HUMAN Zinc finger and BTB domain-containing protein 16 OS=Homo sapiens
GN=ZBTB16 PE=1 SV=2
Length = 673
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
T D+ + + C CF L+ SH R + K ++C GCG
Sbjct: 541 TGDHPYECEFCGSCFRDESTLK-SHKRIHTGEKPYECNGCG 580
>sp|Q68EA5|ZNF57_HUMAN Zinc finger protein 57 OS=Homo sapiens GN=ZNF57 PE=2 SV=3
Length = 555
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDD 51
M T D + + C K F SS+ + H R + K ++CK CG AF W
Sbjct: 327 MRIHTGDKLYKCEHCGKAFTSSRSFQ-GHLRTHTGEKPYECKQCGKAFTWSS 377
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 11 QLKACEKC---FNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDD 51
QL CE+C F SS+ R H R + K ++CK CG F W
Sbjct: 390 QLYKCEQCGKAFTSSRSFR-GHLRTHTGEKPYECKQCGKTFTWSS 433
>sp|Q15973|ZN124_HUMAN Zinc finger protein 124 OS=Homo sapiens GN=ZNF124 PE=2 SV=2
Length = 351
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDD 51
T + R + K C K F+ S LR H R + K ++CK CG AF++ +
Sbjct: 171 IHTGEKRYECKQCGKAFSRSSHLR-DHERTHTGEKPYECKHCGKAFRYSN 219
>sp|Q96H40|ZN486_HUMAN Zinc finger protein 486 OS=Homo sapiens GN=ZNF486 PE=2 SV=4
Length = 463
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 5 TSDNRTQLKACEKCFNSSKVL---RTSHTRENPNRKFWKCKGCG-AFKWDDD 52
T + + + C K + +S L +T+HT E P +KCK CG AF W D
Sbjct: 401 TGEKPYKCEECGKAYTTSSNLTEHKTTHTGEKP----YKCKECGKAFNWSSD 448
>sp|Q14586|ZN267_HUMAN Zinc finger protein 267 OS=Homo sapiens GN=ZNF267 PE=2 SV=3
Length = 743
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDDD 52
T + + KAC K F+ S L T H R + K + CK CG AF + D
Sbjct: 571 TGEKPYKCKACSKSFSDSSGL-TVHRRTHTGEKPYTCKECGKAFSYSSD 618
>sp|Q9BS34|ZN670_HUMAN Zinc finger protein 670 OS=Homo sapiens GN=ZNF670 PE=1 SV=1
Length = 389
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 15 CEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDDD 52
C K F S+VLR H R + K ++CK CG AFK+ +
Sbjct: 286 CGKAFRCSRVLRV-HERTHSGEKPYECKQCGKAFKYSSN 323
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
T + + K C+K FN S LR H R + K + CK CG
Sbjct: 192 TGEKTYKCKHCDKAFNYSSYLR-EHERTHTGEKPYACKKCG 231
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 13 KACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
K C K F SS LR SH R + K ++CK CG
Sbjct: 340 KECGKSFTSSSALR-SHERTHTGEKPYECKKCG 371
>sp|Q8IYX0|ZN679_HUMAN Zinc finger protein 679 OS=Homo sapiens GN=ZNF679 PE=2 SV=2
Length = 411
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKWDD 51
T +N Q + C K FN S L + H R + K ++C+ CG AF W
Sbjct: 205 IHTRENSYQCEECGKPFNCSSTL-SKHKRIHTGEKPYRCEECGKAFTWSS 253
>sp|Q4P149|XRN2_USTMA 5'-3' exoribonuclease 2 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RAT1 PE=3 SV=3
Length = 1233
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 19 FNSSKVLRTSHTRENPNRKFWKCKGCGAFKWDDDRKSSECND 60
F ++K R H E WK KG GA DD++KS D
Sbjct: 124 FRAAKEAREKHEEEQAALAEWKAKGLGAT--DDEKKSKRAWD 163
>sp|Q08AG5|ZN844_HUMAN Zinc finger protein 844 OS=Homo sapiens GN=ZNF844 PE=2 SV=1
Length = 666
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 5 TSDNRTQLKACEKCFNSSKVL---RTSHTRENPNRKFWKCKGCG-AFKW 49
T + + K C K F S L R +HT E P ++CK CG AF+W
Sbjct: 248 TGEKPYECKECGKAFGSPNSLYEHRRTHTGEKP----YECKQCGKAFRW 292
>sp|A8MTY0|ZN724_HUMAN Putative zinc finger protein 724 OS=Homo sapiens GN=ZNF724P PE=5
SV=3
Length = 619
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
T+ N +L+ C K FN S L + H R + +K +KC+ CG
Sbjct: 191 IHTTVNSYKLEECGKAFNVSSTL-SQHKRIHTGQKHYKCEECG 232
>sp|Q3SYV7|ZN345_BOVIN Zinc finger protein 345 OS=Bos taurus GN=ZNF345 PE=2 SV=1
Length = 487
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
T + K CEK F + L T H R + K ++CK CG
Sbjct: 421 TGQKPYECKECEKTFGTGSTL-TQHQRMHTAEKLYECKACG 460
>sp|Q14584|ZN266_HUMAN Zinc finger protein 266 OS=Homo sapiens GN=ZNF266 PE=2 SV=2
Length = 549
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
M T DN + K C K F S L T H + + K +KCK CG
Sbjct: 231 MGTHTGDNPYECKECGKAFTRSCQL-TQHRKTHTGEKPYKCKDCG 274
>sp|Q8BI99|ZN879_MOUSE Zinc finger protein 879 OS=Mus musculus GN=Znf879 PE=2 SV=1
Length = 563
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 5 TSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKW 49
T + K C K F+ S L T H R + K +KC CG AF W
Sbjct: 395 TGEKPYACKECGKAFSQSSAL-TQHQRIHTGEKPYKCAECGKAFSW 439
>sp|Q8TBZ8|ZN564_HUMAN Zinc finger protein 564 OS=Homo sapiens GN=ZNF564 PE=2 SV=1
Length = 553
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG-AFKW 49
M T D + + C K F+ +RT H R + K ++CK CG AF +
Sbjct: 440 MILHTGDGPYKCQVCGKAFDCPSSVRT-HERTHTGEKPYECKECGKAFNY 488
>sp|Q8IYN0|ZN100_HUMAN Zinc finger protein 100 OS=Homo sapiens GN=ZNF100 PE=2 SV=2
Length = 542
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 3 FSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGCG 45
F ++N Q K C K FN L T+H R + K +KC+ CG
Sbjct: 226 FHITENSYQCKDCGKAFNWFSTL-TTHRRIHTGEKPYKCEECG 267
>sp|Q9NPA5|ZF64A_HUMAN Zinc finger protein 64 homolog, isoforms 1 and 2 OS=Homo sapiens
GN=ZFP64 PE=1 SV=3
Length = 681
Score = 28.9 bits (63), Expect = 9.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 1 MSFSTSDNRTQLKACEKCFNSSKVLRTSHTRENPNRKFWKCKGC 44
+ T D + + C KCF+ L+T H R + K +KCK C
Sbjct: 166 LKIHTGDKPHKCEVCGKCFSRKDKLKT-HMRCHTGVKPYKCKTC 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,804,047
Number of Sequences: 539616
Number of extensions: 1298553
Number of successful extensions: 4177
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 3612
Number of HSP's gapped (non-prelim): 852
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)