Query 039991
Match_columns 172
No_of_seqs 149 out of 1092
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:55:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039991.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039991hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 99.9 1.3E-21 4.5E-26 165.2 12.4 134 23-172 4-142 (454)
2 2acv_A Triterpene UDP-glucosyl 99.8 2.4E-19 8.3E-24 151.5 10.5 132 28-172 2-139 (463)
3 2pq6_A UDP-glucuronosyl/UDP-gl 99.8 3.1E-19 1.1E-23 151.3 8.5 127 35-172 8-143 (482)
4 2vch_A Hydroquinone glucosyltr 99.8 5.7E-18 1.9E-22 143.7 13.2 123 34-172 5-135 (480)
5 2c1x_A UDP-glucose flavonoid 3 99.8 7.6E-18 2.6E-22 142.1 12.5 132 29-172 1-137 (456)
6 2iya_A OLEI, oleandomycin glyc 99.7 2.9E-17 1E-21 136.0 13.4 123 35-172 12-134 (424)
7 4amg_A Snogd; transferase, pol 99.7 3E-17 1E-21 134.3 11.6 136 27-172 11-153 (400)
8 3ia7_A CALG4; glycosysltransfe 99.6 1E-14 3.6E-19 118.9 11.2 123 35-172 4-128 (402)
9 2iyf_A OLED, oleandomycin glyc 99.6 2.5E-14 8.6E-19 118.3 12.1 129 29-172 1-129 (430)
10 3rsc_A CALG2; TDP, enediyne, s 99.6 7.3E-15 2.5E-19 120.9 8.3 122 33-172 18-144 (415)
11 1iir_A Glycosyltransferase GTF 99.5 3.5E-14 1.2E-18 117.5 10.5 117 36-172 1-121 (415)
12 1rrv_A Glycosyltransferase GTF 99.4 3E-13 1E-17 111.8 9.7 118 36-172 1-122 (416)
13 3oti_A CALG3; calicheamicin, T 99.4 1.3E-12 4.6E-17 107.0 10.5 122 33-172 18-155 (398)
14 4fzr_A SSFS6; structural genom 99.4 2.2E-12 7.4E-17 105.7 10.8 130 33-172 13-148 (398)
15 2p6p_A Glycosyl transferase; X 99.4 3.1E-12 1.1E-16 104.2 11.5 123 36-172 1-132 (384)
16 2yjn_A ERYCIII, glycosyltransf 99.4 1.5E-12 5E-17 108.5 9.0 130 34-172 19-169 (441)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.3 6.1E-12 2.1E-16 102.5 10.2 125 36-172 2-139 (391)
18 3h4t_A Glycosyltransferase GTF 99.3 7.2E-12 2.4E-16 103.4 7.0 117 36-172 1-120 (404)
19 3otg_A CALG1; calicheamicin, T 99.1 1.1E-10 3.8E-15 95.5 8.9 125 33-172 18-155 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.9 9.7E-09 3.3E-13 83.8 9.5 115 36-172 3-119 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 98.2 1.2E-05 4.1E-10 64.2 10.9 115 36-172 7-123 (364)
22 3fro_A GLGA glycogen synthase; 96.9 0.013 4.6E-07 47.1 11.5 39 35-73 2-45 (439)
23 2r60_A Glycosyl transferase, g 96.5 0.02 7E-07 47.5 10.1 39 35-73 7-60 (499)
24 1v4v_A UDP-N-acetylglucosamine 95.2 0.17 5.7E-06 40.1 10.1 110 35-172 5-119 (376)
25 3dzc_A UDP-N-acetylglucosamine 95.0 0.15 5E-06 41.6 9.3 120 18-172 15-139 (396)
26 3okp_A GDP-mannose-dependent a 94.8 0.2 6.7E-06 39.6 9.6 102 35-170 4-111 (394)
27 2jjm_A Glycosyl transferase, g 94.8 0.24 8.1E-06 39.5 10.1 38 36-73 16-54 (394)
28 1vgv_A UDP-N-acetylglucosamine 94.7 0.063 2.2E-06 42.6 6.3 36 36-72 1-37 (384)
29 3c48_A Predicted glycosyltrans 93.7 0.089 3.1E-06 42.5 5.3 41 34-74 19-70 (438)
30 3beo_A UDP-N-acetylglucosamine 92.6 1.4 4.8E-05 34.4 10.8 39 35-74 8-48 (375)
31 3ot5_A UDP-N-acetylglucosamine 92.6 0.51 1.7E-05 38.4 8.3 110 35-172 27-142 (403)
32 2iuy_A Avigt4, glycosyltransfe 90.7 0.4 1.4E-05 37.3 5.5 28 46-73 30-57 (342)
33 2x6q_A Trehalose-synthase TRET 90.7 0.26 8.8E-06 39.5 4.5 40 35-74 40-81 (416)
34 2iw1_A Lipopolysaccharide core 90.4 0.28 9.5E-06 38.4 4.3 36 37-72 2-40 (374)
35 2gek_A Phosphatidylinositol ma 90.1 0.49 1.7E-05 37.5 5.6 41 34-74 19-63 (406)
36 1y80_A Predicted cobalamin bin 88.7 1.2 4E-05 32.9 6.4 48 34-81 87-134 (210)
37 2x0d_A WSAF; GT4 family, trans 88.7 0.26 8.7E-06 40.4 3.0 40 34-73 45-89 (413)
38 3vue_A GBSS-I, granule-bound s 87.9 0.67 2.3E-05 39.3 5.2 39 34-72 8-52 (536)
39 1rzu_A Glycogen synthase 1; gl 86.5 0.77 2.6E-05 37.5 4.7 38 36-73 1-44 (485)
40 4hwg_A UDP-N-acetylglucosamine 86.5 0.69 2.3E-05 37.6 4.3 110 35-172 9-121 (385)
41 3ezx_A MMCP 1, monomethylamine 86.2 3 0.0001 31.1 7.4 49 33-81 90-138 (215)
42 2qzs_A Glycogen synthase; glyc 86.0 0.93 3.2E-05 37.0 4.9 38 36-73 1-44 (485)
43 3s28_A Sucrose synthase 1; gly 85.4 1.5 5.2E-05 39.3 6.2 26 147-172 407-434 (816)
44 1kjn_A MTH0777; hypotethical p 85.1 1.5 5.3E-05 31.0 4.9 46 29-74 1-47 (157)
45 2i2x_B MTAC, methyltransferase 84.1 3.5 0.00012 31.5 7.1 48 33-80 121-168 (258)
46 4dry_A 3-oxoacyl-[acyl-carrier 83.8 1.4 4.7E-05 33.9 4.7 52 18-72 15-66 (281)
47 2yxb_A Coenzyme B12-dependent 83.8 2.8 9.6E-05 29.7 6.0 47 34-80 17-63 (161)
48 2lpm_A Two-component response 80.3 2.7 9.3E-05 28.4 4.7 32 141-172 47-83 (123)
49 4b4o_A Epimerase family protei 80.3 1.9 6.5E-05 32.9 4.3 33 36-72 1-33 (298)
50 1ccw_A Protein (glutamate muta 78.1 4.3 0.00015 27.8 5.2 46 35-80 3-48 (137)
51 3vot_A L-amino acid ligase, BL 75.3 23 0.00078 28.5 9.7 33 139-171 67-101 (425)
52 3lqk_A Dipicolinate synthase s 71.3 6.7 0.00023 29.0 5.0 40 36-76 8-48 (201)
53 3zqu_A Probable aromatic acid 71.0 9.1 0.00031 28.4 5.7 41 35-76 4-44 (209)
54 2hy7_A Glucuronosyltransferase 70.2 3.4 0.00012 33.3 3.4 36 35-72 14-52 (406)
55 2r8r_A Sensor protein; KDPD, P 70.0 11 0.00037 28.5 6.0 40 34-73 5-44 (228)
56 1g5t_A COB(I)alamin adenosyltr 69.9 30 0.001 25.3 11.8 39 35-73 28-66 (196)
57 2g1u_A Hypothetical protein TM 69.6 6 0.0002 27.2 4.3 40 28-72 12-51 (155)
58 3qjg_A Epidermin biosynthesis 66.2 8.5 0.00029 27.7 4.5 42 36-78 6-47 (175)
59 3sbx_A Putative uncharacterize 65.9 8.3 0.00028 28.2 4.5 36 35-70 13-51 (189)
60 1mvl_A PPC decarboxylase athal 65.6 8.4 0.00029 28.6 4.5 40 35-76 19-58 (209)
61 1id1_A Putative potassium chan 65.6 5.2 0.00018 27.4 3.2 33 35-72 3-35 (153)
62 3l6d_A Putative oxidoreductase 63.4 5.5 0.00019 30.9 3.3 40 28-72 2-41 (306)
63 2ejb_A Probable aromatic acid 63.3 14 0.00048 26.9 5.3 40 36-76 2-41 (189)
64 3qua_A Putative uncharacterize 62.8 14 0.00047 27.2 5.2 49 21-70 9-60 (199)
65 1sbz_A Probable aromatic acid 62.8 13 0.00044 27.3 5.0 41 37-78 2-43 (197)
66 3gl9_A Response regulator; bet 61.6 12 0.0004 24.0 4.3 27 141-167 40-68 (122)
67 3mc3_A DSRE/DSRF-like family p 61.5 23 0.00079 23.9 5.9 40 36-75 16-58 (134)
68 1y1p_A ARII, aldehyde reductas 61.3 14 0.00047 28.2 5.3 42 27-72 3-44 (342)
69 2bcg_G Secretory pathway GDP d 61.0 6.2 0.00021 32.3 3.3 42 26-72 2-43 (453)
70 2c5a_A GDP-mannose-3', 5'-epim 59.3 12 0.00041 29.6 4.7 34 35-72 29-62 (379)
71 3bul_A Methionine synthase; tr 59.0 19 0.00064 31.0 6.0 45 35-79 98-142 (579)
72 3lyu_A Putative hydrogenase; t 59.0 13 0.00045 25.3 4.3 36 36-74 19-54 (142)
73 3mcu_A Dipicolinate synthase, 57.5 13 0.00044 27.5 4.3 39 36-75 6-45 (207)
74 1g63_A Epidermin modifying enz 57.5 9.4 0.00032 27.6 3.5 40 37-77 4-43 (181)
75 3to5_A CHEY homolog; alpha(5)b 56.9 12 0.00042 25.3 3.8 26 142-167 52-79 (134)
76 3oy2_A Glycosyltransferase B73 56.6 13 0.00043 29.3 4.4 37 36-73 1-40 (413)
77 4dll_A 2-hydroxy-3-oxopropiona 56.0 17 0.00057 28.3 5.0 34 34-72 30-63 (320)
78 1lss_A TRK system potassium up 56.0 20 0.00069 23.3 4.8 33 35-72 4-36 (140)
79 1psw_A ADP-heptose LPS heptosy 55.9 11 0.00038 29.1 3.9 40 36-75 1-42 (348)
80 3g0o_A 3-hydroxyisobutyrate de 55.8 8.2 0.00028 29.7 3.1 34 34-72 6-39 (303)
81 3pdi_B Nitrogenase MOFE cofact 54.5 10 0.00034 31.5 3.6 32 138-172 366-397 (458)
82 3h2s_A Putative NADH-flavin re 54.4 16 0.00053 26.1 4.3 32 37-72 2-33 (224)
83 2gk4_A Conserved hypothetical 54.2 11 0.00038 28.4 3.5 22 52-73 32-53 (232)
84 1tvm_A PTS system, galactitol- 54.1 42 0.0014 21.9 6.0 43 30-72 16-59 (113)
85 3kkj_A Amine oxidase, flavin-c 53.9 8.4 0.00029 27.3 2.7 19 53-71 15-33 (336)
86 3llv_A Exopolyphosphatase-rela 53.8 16 0.00055 24.2 4.1 33 35-72 6-38 (141)
87 3pdi_A Nitrogenase MOFE cofact 53.8 14 0.00049 30.8 4.4 32 138-172 392-423 (483)
88 4gi5_A Quinone reductase; prot 53.1 29 0.001 26.8 5.8 36 36-71 24-61 (280)
89 3un1_A Probable oxidoreductase 52.9 12 0.00039 28.1 3.5 48 17-72 14-61 (260)
90 4hb9_A Similarities with proba 52.8 11 0.00039 29.4 3.6 29 36-69 2-30 (412)
91 3dm5_A SRP54, signal recogniti 51.8 26 0.0009 29.0 5.7 41 35-75 100-140 (443)
92 1byr_A Protein (endonuclease); 51.5 33 0.0011 23.1 5.4 59 10-74 6-64 (155)
93 3uf0_A Short-chain dehydrogena 51.4 59 0.002 24.3 7.3 53 14-71 11-63 (273)
94 3eag_A UDP-N-acetylmuramate:L- 51.2 18 0.00062 28.2 4.5 35 35-73 4-38 (326)
95 2gt1_A Lipopolysaccharide hept 51.1 14 0.00047 28.5 3.7 41 36-76 1-43 (326)
96 3v2g_A 3-oxoacyl-[acyl-carrier 51.0 24 0.00083 26.5 5.0 51 17-72 14-64 (271)
97 1ydh_A AT5G11950; structural g 50.5 35 0.0012 25.3 5.7 36 35-70 9-48 (216)
98 3uxy_A Short-chain dehydrogena 50.5 20 0.00068 26.9 4.5 48 16-71 13-60 (266)
99 3kjh_A CO dehydrogenase/acetyl 50.3 15 0.0005 26.7 3.6 38 37-74 2-39 (254)
100 3vps_A TUNA, NAD-dependent epi 49.9 13 0.00046 28.0 3.5 34 35-72 7-40 (321)
101 2a33_A Hypothetical protein; s 49.8 37 0.0013 25.1 5.8 37 35-71 13-53 (215)
102 3fwz_A Inner membrane protein 48.6 13 0.00044 25.0 2.9 34 35-73 7-40 (140)
103 1p3y_1 MRSD protein; flavoprot 48.0 19 0.00067 26.2 3.9 39 36-75 9-47 (194)
104 3dhn_A NAD-dependent epimerase 47.6 24 0.00081 25.2 4.4 34 35-72 4-37 (227)
105 3lrx_A Putative hydrogenase; a 46.2 17 0.0006 25.1 3.3 37 36-75 24-60 (158)
106 3dqp_A Oxidoreductase YLBE; al 45.6 20 0.0007 25.6 3.7 32 37-72 2-33 (219)
107 3f6p_A Transcriptional regulat 45.6 33 0.0011 21.5 4.5 26 141-166 40-67 (120)
108 1weh_A Conserved hypothetical 45.4 31 0.0011 24.5 4.6 36 37-72 3-42 (171)
109 4g6h_A Rotenone-insensitive NA 45.4 12 0.0004 31.3 2.6 35 34-73 41-75 (502)
110 3end_A Light-independent proto 44.7 36 0.0012 25.9 5.2 39 35-73 41-79 (307)
111 1mio_B Nitrogenase molybdenum 44.7 18 0.00063 29.8 3.7 31 139-172 377-407 (458)
112 3obb_A Probable 3-hydroxyisobu 44.6 24 0.00082 27.3 4.2 33 35-72 3-35 (300)
113 1p9o_A Phosphopantothenoylcyst 44.6 14 0.00049 29.2 2.8 24 51-74 67-90 (313)
114 1qzu_A Hypothetical protein MD 44.4 23 0.00079 26.1 3.8 41 35-76 19-60 (206)
115 1sb8_A WBPP; epimerase, 4-epim 44.3 19 0.00066 27.8 3.6 34 35-72 27-60 (352)
116 3tov_A Glycosyl transferase fa 43.7 13 0.00045 29.3 2.6 42 35-76 8-51 (349)
117 3bfv_A CAPA1, CAPB2, membrane 43.7 29 0.00098 26.3 4.4 40 35-74 81-122 (271)
118 3v8b_A Putative dehydrogenase, 43.6 32 0.0011 26.0 4.8 48 17-72 14-61 (283)
119 3t6k_A Response regulator rece 43.5 33 0.0011 22.2 4.3 26 142-167 43-70 (136)
120 1wek_A Hypothetical protein TT 43.1 31 0.0011 25.6 4.4 36 36-71 38-77 (217)
121 3grc_A Sensor protein, kinase; 42.9 37 0.0013 21.8 4.5 27 141-167 44-72 (140)
122 3p0j_A Tyrosyl-tRNA synthetase 42.6 41 0.0014 29.5 5.7 41 34-74 381-426 (690)
123 2pzm_A Putative nucleotide sug 42.4 30 0.001 26.4 4.5 32 36-71 21-52 (330)
124 1xjc_A MOBB protein homolog; s 42.3 50 0.0017 23.4 5.2 39 35-73 4-42 (169)
125 4da9_A Short-chain dehydrogena 42.0 42 0.0014 25.3 5.1 33 36-71 29-61 (280)
126 4dzz_A Plasmid partitioning pr 42.0 39 0.0013 23.6 4.7 37 38-74 4-41 (206)
127 3u7q_A Nitrogenase molybdenum- 41.7 17 0.00059 30.4 3.1 31 139-172 409-439 (492)
128 3doj_A AT3G25530, dehydrogenas 41.6 24 0.00082 27.2 3.7 33 35-72 21-53 (310)
129 3i42_A Response regulator rece 41.5 34 0.0011 21.6 4.0 26 141-166 41-68 (127)
130 3m6m_D Sensory/regulatory prot 41.5 36 0.0012 22.2 4.3 26 142-167 53-80 (143)
131 2we8_A Xanthine dehydrogenase; 41.5 36 0.0012 27.6 4.8 35 34-73 203-237 (386)
132 1cp2_A CP2, nitrogenase iron p 41.4 36 0.0012 25.1 4.6 37 37-73 3-39 (269)
133 3dtt_A NADP oxidoreductase; st 41.3 25 0.00086 26.0 3.7 33 35-72 19-51 (245)
134 2afh_E Nitrogenase iron protei 41.1 41 0.0014 25.3 5.0 38 36-73 3-40 (289)
135 4dyv_A Short-chain dehydrogena 41.0 39 0.0013 25.4 4.8 48 17-72 14-61 (272)
136 2rh8_A Anthocyanidin reductase 40.8 31 0.0011 26.3 4.3 32 36-71 10-41 (338)
137 1yxm_A Pecra, peroxisomal tran 40.3 50 0.0017 24.8 5.4 21 52-72 31-51 (303)
138 1wcv_1 SOJ, segregation protei 40.2 32 0.0011 25.4 4.2 39 36-74 7-46 (257)
139 3p32_A Probable GTPase RV1496/ 40.2 42 0.0015 26.4 5.1 40 34-73 78-117 (355)
140 1u7z_A Coenzyme A biosynthesis 40.0 25 0.00087 26.3 3.5 21 52-72 37-57 (226)
141 3ksu_A 3-oxoacyl-acyl carrier 39.7 95 0.0033 22.9 6.8 32 37-71 12-43 (262)
142 2h78_A Hibadh, 3-hydroxyisobut 39.7 32 0.0011 26.1 4.2 33 35-72 3-35 (302)
143 2c20_A UDP-glucose 4-epimerase 39.6 34 0.0012 26.0 4.3 32 36-71 2-33 (330)
144 2pk3_A GDP-6-deoxy-D-LYXO-4-he 39.5 34 0.0012 25.8 4.3 35 34-72 11-45 (321)
145 3ew7_A LMO0794 protein; Q8Y8U8 39.5 24 0.00081 24.9 3.2 32 37-72 2-33 (221)
146 2ew2_A 2-dehydropantoate 2-red 39.2 25 0.00084 26.6 3.5 33 35-72 3-35 (316)
147 2r6j_A Eugenol synthase 1; phe 39.2 43 0.0015 25.3 4.8 34 36-73 12-45 (318)
148 3e8x_A Putative NAD-dependent 39.1 24 0.00082 25.5 3.2 34 35-72 21-54 (236)
149 2qs7_A Uncharacterized protein 38.9 58 0.002 22.2 5.1 38 37-74 9-47 (144)
150 3nhm_A Response regulator; pro 38.9 47 0.0016 21.0 4.4 24 142-165 42-67 (133)
151 3on5_A BH1974 protein; structu 38.9 39 0.0013 27.2 4.6 34 34-73 198-232 (362)
152 4dmm_A 3-oxoacyl-[acyl-carrier 38.7 54 0.0018 24.5 5.3 33 36-71 28-60 (269)
153 4fgs_A Probable dehydrogenase 38.6 47 0.0016 25.4 4.9 45 20-71 17-61 (273)
154 2xxa_A Signal recognition part 38.5 65 0.0022 26.4 6.0 40 36-75 101-141 (433)
155 1z82_A Glycerol-3-phosphate de 38.4 27 0.00091 27.2 3.6 33 35-72 14-46 (335)
156 1nn5_A Similar to deoxythymidy 38.4 57 0.0019 22.9 5.2 37 35-71 9-45 (215)
157 1rpn_A GDP-mannose 4,6-dehydra 38.3 36 0.0012 25.8 4.3 36 34-73 13-48 (335)
158 1t35_A Hypothetical protein YV 38.3 57 0.002 23.5 5.1 34 37-70 3-40 (191)
159 3ug7_A Arsenical pump-driving 37.9 57 0.002 25.6 5.5 40 35-74 25-65 (349)
160 2l2q_A PTS system, cellobiose- 37.8 52 0.0018 21.2 4.5 38 35-72 4-41 (109)
161 3k5i_A Phosphoribosyl-aminoimi 37.8 53 0.0018 26.3 5.3 46 15-70 9-54 (403)
162 3c1o_A Eugenol synthase; pheny 37.6 30 0.001 26.2 3.7 35 35-73 4-38 (321)
163 3hn2_A 2-dehydropantoate 2-red 37.5 31 0.0011 26.5 3.8 33 36-73 3-35 (312)
164 3gt7_A Sensor protein; structu 37.5 44 0.0015 22.1 4.2 27 141-167 45-73 (154)
165 1byi_A Dethiobiotin synthase; 37.4 52 0.0018 23.4 4.9 33 38-70 4-37 (224)
166 3kht_A Response regulator; PSI 37.4 52 0.0018 21.2 4.5 27 141-167 45-73 (144)
167 2ts1_A Tyrosyl-tRNA synthetase 37.2 36 0.0012 28.0 4.2 36 36-72 33-71 (419)
168 1y42_X Tyrosyl-tRNA synthetase 37.1 29 0.001 28.2 3.6 35 37-72 68-105 (392)
169 1ks9_A KPA reductase;, 2-dehyd 37.0 27 0.00094 26.0 3.3 31 37-72 2-32 (291)
170 3c97_A Signal transduction his 36.8 57 0.002 20.9 4.7 26 142-167 49-76 (140)
171 1jx7_A Hypothetical protein YC 36.8 60 0.002 20.6 4.7 29 46-74 15-45 (117)
172 3i4f_A 3-oxoacyl-[acyl-carrier 36.6 53 0.0018 24.1 4.9 34 36-72 7-40 (264)
173 1o97_C Electron transferring f 36.6 35 0.0012 26.0 3.9 33 140-172 105-143 (264)
174 3enk_A UDP-glucose 4-epimerase 36.4 46 0.0016 25.3 4.6 34 35-72 5-38 (341)
175 3awd_A GOX2181, putative polyo 36.3 57 0.0019 23.7 5.0 21 52-72 26-46 (260)
176 4iin_A 3-ketoacyl-acyl carrier 36.2 66 0.0022 23.8 5.4 33 37-72 30-62 (271)
177 3hv2_A Response regulator/HD d 36.1 49 0.0017 21.7 4.3 26 141-166 52-79 (153)
178 3gpi_A NAD-dependent epimerase 36.1 54 0.0018 24.3 4.9 32 36-72 4-35 (286)
179 4g65_A TRK system potassium up 36.0 12 0.00041 31.0 1.2 33 35-72 3-35 (461)
180 1qyc_A Phenylcoumaran benzylic 36.0 34 0.0012 25.6 3.8 33 36-72 5-37 (308)
181 3rkr_A Short chain oxidoreduct 35.9 65 0.0022 23.7 5.3 33 37-72 30-62 (262)
182 3i83_A 2-dehydropantoate 2-red 35.8 25 0.00086 27.2 3.0 33 36-73 3-35 (320)
183 4as2_A Phosphorylcholine phosp 35.8 31 0.0011 27.2 3.5 25 49-73 145-169 (327)
184 3itj_A Thioredoxin reductase 1 35.6 21 0.00071 27.0 2.5 32 35-71 22-53 (338)
185 1efv_B Electron transfer flavo 35.6 37 0.0013 25.8 3.9 32 141-172 110-147 (255)
186 4dgk_A Phytoene dehydrogenase; 35.6 18 0.00062 29.5 2.2 32 36-72 2-33 (501)
187 3oh8_A Nucleoside-diphosphate 35.3 43 0.0015 27.7 4.6 34 35-72 147-180 (516)
188 3lte_A Response regulator; str 35.3 51 0.0017 20.8 4.2 26 142-167 45-72 (132)
189 1orr_A CDP-tyvelose-2-epimeras 35.2 43 0.0015 25.4 4.3 32 36-71 2-33 (347)
190 1qyd_A Pinoresinol-lariciresin 35.0 51 0.0017 24.7 4.6 34 35-72 4-37 (313)
191 1ihu_A Arsenical pump-driving 34.9 49 0.0017 27.9 4.9 38 36-73 8-46 (589)
192 1p6q_A CHEY2; chemotaxis, sign 34.8 71 0.0024 19.9 4.8 27 141-167 45-73 (129)
193 3goc_A Endonuclease V; alpha-b 34.6 47 0.0016 25.2 4.2 26 147-172 107-139 (237)
194 3hwr_A 2-dehydropantoate 2-red 34.5 32 0.0011 26.6 3.5 30 35-69 19-48 (318)
195 1hdo_A Biliverdin IX beta redu 34.4 32 0.0011 23.8 3.2 33 36-72 4-36 (206)
196 4e7p_A Response regulator; DNA 34.3 58 0.002 21.2 4.4 28 139-166 58-87 (150)
197 3zq6_A Putative arsenical pump 34.3 58 0.002 25.2 4.9 38 36-73 14-52 (324)
198 2j37_W Signal recognition part 34.2 61 0.0021 27.2 5.3 40 35-74 101-140 (504)
199 2pid_A Tyrosyl-tRNA synthetase 34.2 72 0.0025 25.4 5.5 50 22-72 33-87 (356)
200 3q9l_A Septum site-determining 34.0 65 0.0022 23.4 5.0 32 42-73 10-41 (260)
201 2b69_A UDP-glucuronate decarbo 34.0 48 0.0016 25.3 4.4 34 35-72 27-60 (343)
202 3hdg_A Uncharacterized protein 34.0 47 0.0016 21.2 3.8 25 142-166 46-72 (137)
203 1jil_A Tyrrs, tyrosyl-tRNA syn 34.0 34 0.0012 28.1 3.6 36 36-72 35-73 (420)
204 3h7a_A Short chain dehydrogena 33.9 61 0.0021 23.8 4.8 21 52-72 20-40 (252)
205 1xhf_A DYE resistance, aerobic 33.8 65 0.0022 19.9 4.4 26 142-167 42-69 (123)
206 1efp_B ETF, protein (electron 33.8 36 0.0012 25.8 3.5 31 142-172 108-144 (252)
207 2qv0_A Protein MRKE; structura 33.7 65 0.0022 20.6 4.5 27 141-167 49-77 (143)
208 3c3m_A Response regulator rece 33.7 58 0.002 20.9 4.3 26 142-167 42-69 (138)
209 2v3c_C SRP54, signal recogniti 33.6 44 0.0015 27.4 4.2 39 36-74 100-138 (432)
210 3a10_A Response regulator; pho 33.6 74 0.0025 19.4 4.6 26 142-167 40-67 (116)
211 2vo1_A CTP synthase 1; pyrimid 33.5 63 0.0021 25.2 4.8 40 35-74 22-64 (295)
212 3of5_A Dethiobiotin synthetase 33.4 67 0.0023 23.6 4.9 35 36-70 5-40 (228)
213 2vsy_A XCC0866; transferase, g 33.3 60 0.0021 26.7 5.1 39 34-72 204-246 (568)
214 1nks_A Adenylate kinase; therm 33.3 63 0.0022 22.0 4.6 35 36-70 2-36 (194)
215 3h1g_A Chemotaxis protein CHEY 33.3 68 0.0023 20.2 4.5 23 145-167 49-73 (129)
216 3lzw_A Ferredoxin--NADP reduct 33.2 16 0.00054 27.6 1.4 34 35-73 7-40 (332)
217 3kl4_A SRP54, signal recogniti 33.2 60 0.0021 26.7 5.0 40 36-75 98-137 (433)
218 2x5n_A SPRPN10, 26S proteasome 33.1 78 0.0027 22.6 5.2 60 38-98 110-171 (192)
219 2pd6_A Estradiol 17-beta-dehyd 33.1 73 0.0025 23.2 5.2 21 52-72 20-40 (264)
220 3edm_A Short chain dehydrogena 33.0 66 0.0023 23.7 4.9 33 37-72 9-41 (259)
221 3ih5_A Electron transfer flavo 32.9 42 0.0015 24.7 3.7 35 138-172 82-119 (217)
222 4gbj_A 6-phosphogluconate dehy 32.8 38 0.0013 26.1 3.6 30 37-71 7-36 (297)
223 1zgz_A Torcad operon transcrip 32.8 69 0.0023 19.8 4.4 27 141-167 40-68 (122)
224 3b2n_A Uncharacterized protein 32.5 56 0.0019 20.8 4.0 25 143-167 45-71 (133)
225 2g36_A Tryptophanyl-tRNA synth 32.5 30 0.001 27.5 3.0 34 39-72 18-53 (340)
226 3oz2_A Digeranylgeranylglycero 32.3 27 0.00094 26.9 2.7 18 53-70 17-34 (397)
227 3f67_A Putative dienelactone h 32.0 95 0.0032 21.5 5.5 35 36-71 33-67 (241)
228 3lf2_A Short chain oxidoreduct 31.9 81 0.0028 23.3 5.3 33 37-72 9-41 (265)
229 1oi4_A Hypothetical protein YH 31.9 1.3E+02 0.0045 21.1 6.5 38 35-73 23-60 (193)
230 1g3q_A MIND ATPase, cell divis 31.8 76 0.0026 22.7 5.0 36 38-73 5-41 (237)
231 2hmt_A YUAA protein; RCK, KTN, 31.8 28 0.00096 22.7 2.4 32 36-72 7-38 (144)
232 1rcu_A Conserved hypothetical 31.7 89 0.003 22.7 5.2 34 35-68 23-63 (195)
233 1xrs_B D-lysine 5,6-aminomutas 31.7 43 0.0015 25.6 3.7 48 34-81 119-175 (262)
234 3lua_A Response regulator rece 31.6 43 0.0015 21.5 3.3 17 142-158 44-61 (140)
235 3sju_A Keto reductase; short-c 31.6 62 0.0021 24.2 4.6 33 37-72 25-57 (279)
236 2gas_A Isoflavone reductase; N 31.5 49 0.0017 24.7 4.0 34 36-73 3-36 (307)
237 2pl1_A Transcriptional regulat 31.5 83 0.0028 19.3 4.6 25 142-166 39-65 (121)
238 1f0y_A HCDH, L-3-hydroxyacyl-C 31.4 40 0.0014 25.7 3.5 33 35-72 15-47 (302)
239 3aek_B Light-independent proto 31.3 26 0.0009 29.5 2.6 30 139-171 341-370 (525)
240 3ilh_A Two component response 31.3 65 0.0022 20.6 4.2 20 146-165 59-80 (146)
241 2hy5_A Putative sulfurtransfer 31.1 81 0.0028 20.8 4.7 27 47-73 15-42 (130)
242 3ty2_A 5'-nucleotidase SURE; s 31.1 71 0.0024 24.5 4.8 40 34-75 10-49 (261)
243 1d7o_A Enoyl-[acyl-carrier pro 31.0 90 0.0031 23.4 5.5 19 52-70 23-41 (297)
244 3cu5_A Two component transcrip 30.8 72 0.0025 20.6 4.4 26 142-167 44-71 (141)
245 3crn_A Response regulator rece 30.8 74 0.0025 20.1 4.4 26 142-167 42-69 (132)
246 4h15_A Short chain alcohol deh 30.6 1.1E+02 0.0036 23.0 5.7 34 35-71 10-43 (261)
247 2w36_A Endonuclease V; hypoxan 30.6 56 0.0019 24.5 4.0 26 147-172 103-135 (225)
248 1pno_A NAD(P) transhydrogenase 30.6 63 0.0021 23.2 4.0 38 35-74 23-65 (180)
249 3f6r_A Flavodoxin; FMN binding 30.5 97 0.0033 20.4 5.1 38 36-73 2-40 (148)
250 2xdq_B Light-independent proto 30.5 31 0.001 28.9 2.8 30 139-171 364-393 (511)
251 2raf_A Putative dinucleotide-b 30.4 55 0.0019 23.5 4.0 32 35-71 19-50 (209)
252 2ehd_A Oxidoreductase, oxidore 30.4 40 0.0014 24.2 3.2 21 52-72 18-38 (234)
253 2qyt_A 2-dehydropantoate 2-red 30.3 23 0.00079 26.9 2.0 32 35-71 8-45 (317)
254 3u7q_B Nitrogenase molybdenum- 30.3 44 0.0015 28.2 3.8 30 140-172 431-467 (523)
255 2dkn_A 3-alpha-hydroxysteroid 30.3 40 0.0014 24.3 3.2 21 52-72 14-34 (255)
256 3rqi_A Response regulator prot 30.2 43 0.0015 23.0 3.3 26 141-166 45-72 (184)
257 3dfu_A Uncharacterized protein 30.1 72 0.0025 23.8 4.6 32 35-71 6-37 (232)
258 1bg6_A N-(1-D-carboxylethyl)-L 30.0 36 0.0012 26.3 3.1 33 35-72 4-36 (359)
259 1yb1_A 17-beta-hydroxysteroid 29.9 96 0.0033 22.9 5.4 21 52-72 44-64 (272)
260 1d4o_A NADP(H) transhydrogenas 29.8 66 0.0022 23.2 4.0 37 36-74 23-64 (184)
261 1dbw_A Transcriptional regulat 29.8 67 0.0023 20.1 4.0 27 141-167 41-69 (126)
262 2gkg_A Response regulator homo 29.8 54 0.0019 20.2 3.5 24 143-166 45-71 (127)
263 2r25_B Osmosensing histidine p 29.8 87 0.003 19.9 4.6 22 146-167 51-74 (133)
264 1tmy_A CHEY protein, TMY; chem 29.7 66 0.0023 19.8 3.9 24 144-167 44-69 (120)
265 3iqw_A Tail-anchored protein t 29.6 69 0.0023 25.2 4.6 39 36-74 16-55 (334)
266 3t8y_A CHEB, chemotaxis respon 29.6 59 0.002 21.8 3.8 25 142-166 66-92 (164)
267 2r85_A PURP protein PF1517; AT 29.6 61 0.0021 24.6 4.3 32 36-73 3-34 (334)
268 3cnb_A DNA-binding response re 29.6 74 0.0025 20.2 4.2 27 141-167 48-76 (143)
269 3eul_A Possible nitrate/nitrit 29.6 56 0.0019 21.3 3.7 27 141-167 55-83 (152)
270 4iiu_A 3-oxoacyl-[acyl-carrier 29.5 1.3E+02 0.0044 22.0 6.1 34 37-73 27-60 (267)
271 1jzt_A Hypothetical 27.5 kDa p 29.4 41 0.0014 25.3 3.2 35 36-72 59-94 (246)
272 1dz3_A Stage 0 sporulation pro 29.4 59 0.002 20.5 3.7 22 145-166 46-69 (130)
273 3qxc_A Dethiobiotin synthetase 29.3 74 0.0025 23.8 4.6 34 38-71 24-58 (242)
274 4b4t_W RPN10, 26S proteasome r 29.3 97 0.0033 23.7 5.3 62 37-98 110-175 (268)
275 3cz5_A Two-component response 29.3 83 0.0028 20.5 4.5 25 142-166 46-72 (153)
276 3czc_A RMPB; alpha/beta sandwi 29.1 80 0.0028 20.3 4.2 38 35-72 18-57 (110)
277 1yrb_A ATP(GTP)binding protein 29.0 1E+02 0.0035 22.3 5.4 38 35-73 14-51 (262)
278 3qvl_A Putative hydantoin race 29.0 71 0.0024 23.9 4.4 36 137-172 164-201 (245)
279 1cyd_A Carbonyl reductase; sho 29.0 44 0.0015 24.1 3.2 33 36-72 8-40 (244)
280 2qxy_A Response regulator; reg 29.0 73 0.0025 20.3 4.1 18 141-159 42-59 (142)
281 3e5n_A D-alanine-D-alanine lig 28.9 43 0.0015 26.8 3.4 53 15-73 8-64 (386)
282 2dr3_A UPF0273 protein PH0284; 28.8 1.2E+02 0.004 21.6 5.6 45 35-79 23-67 (247)
283 2pnf_A 3-oxoacyl-[acyl-carrier 28.8 44 0.0015 24.1 3.2 21 52-72 20-40 (248)
284 3d3k_A Enhancer of mRNA-decapp 28.8 43 0.0015 25.4 3.2 35 36-72 86-121 (259)
285 3slg_A PBGP3 protein; structur 28.7 52 0.0018 25.4 3.8 34 35-72 24-58 (372)
286 2yvu_A Probable adenylyl-sulfa 28.5 1.1E+02 0.0038 20.9 5.3 36 35-70 13-48 (186)
287 3pdu_A 3-hydroxyisobutyrate de 28.4 45 0.0015 25.1 3.3 32 36-72 2-33 (287)
288 3dff_A Teicoplanin pseudoaglyc 28.4 86 0.0029 23.8 4.9 22 133-154 134-155 (273)
289 2fsv_C NAD(P) transhydrogenase 28.4 70 0.0024 23.5 4.0 37 36-74 47-88 (203)
290 1zi8_A Carboxymethylenebutenol 28.3 1.1E+02 0.0039 21.0 5.4 35 36-71 29-63 (236)
291 1qgu_B Protein (nitrogenase mo 28.3 38 0.0013 28.5 3.1 30 140-172 427-463 (519)
292 1mb3_A Cell division response 28.3 61 0.0021 20.0 3.6 25 143-167 41-67 (124)
293 1dhr_A Dihydropteridine reduct 28.3 42 0.0014 24.4 3.0 22 51-72 19-40 (241)
294 3s40_A Diacylglycerol kinase; 28.3 1.1E+02 0.0039 23.3 5.7 40 35-74 8-50 (304)
295 2yxn_A Tyrosyl-tRNA synthetase 28.2 51 0.0017 25.9 3.6 35 37-72 37-74 (322)
296 1srr_A SPO0F, sporulation resp 27.9 70 0.0024 19.8 3.8 23 145-167 45-69 (124)
297 3gvc_A Oxidoreductase, probabl 27.9 1.1E+02 0.0037 22.9 5.4 34 36-72 29-62 (277)
298 3pid_A UDP-glucose 6-dehydroge 27.9 44 0.0015 27.5 3.3 33 34-72 35-67 (432)
299 1djl_A Transhydrogenase DIII; 27.8 72 0.0025 23.5 4.0 37 36-74 46-87 (207)
300 3cfy_A Putative LUXO repressor 27.8 63 0.0022 20.7 3.6 23 145-167 46-70 (137)
301 1hyq_A MIND, cell division inh 27.8 88 0.003 22.8 4.8 36 38-73 5-41 (263)
302 4dad_A Putative pilus assembly 27.8 42 0.0014 21.8 2.7 29 138-166 57-88 (146)
303 1nff_A Putative oxidoreductase 27.7 47 0.0016 24.6 3.2 21 52-72 20-40 (260)
304 3afn_B Carbonyl reductase; alp 27.6 48 0.0016 24.0 3.2 21 52-72 20-40 (258)
305 1jbe_A Chemotaxis protein CHEY 27.5 91 0.0031 19.3 4.3 26 142-167 44-71 (128)
306 1txg_A Glycerol-3-phosphate de 27.5 39 0.0013 25.9 2.8 30 37-71 2-31 (335)
307 1mio_A Nitrogenase molybdenum 27.4 33 0.0011 29.0 2.5 33 137-172 446-478 (533)
308 2zat_A Dehydrogenase/reductase 27.4 48 0.0016 24.4 3.2 21 52-72 27-47 (260)
309 2a9o_A Response regulator; ess 27.4 80 0.0027 19.2 4.0 23 144-166 42-66 (120)
310 3f9i_A 3-oxoacyl-[acyl-carrier 27.4 48 0.0017 24.1 3.2 21 52-72 27-47 (249)
311 3d3j_A Enhancer of mRNA-decapp 27.3 47 0.0016 26.0 3.2 35 36-72 133-168 (306)
312 2zay_A Response regulator rece 27.3 65 0.0022 20.7 3.7 27 141-167 46-74 (147)
313 3ioy_A Short-chain dehydrogena 27.3 1.2E+02 0.0041 23.2 5.6 21 52-72 21-41 (319)
314 1xx6_A Thymidine kinase; NESG, 27.2 1.2E+02 0.0041 21.6 5.3 37 36-72 8-45 (191)
315 1h3f_A Tyrosyl-tRNA synthetase 27.2 54 0.0019 27.0 3.7 37 37-74 41-80 (432)
316 2y0c_A BCEC, UDP-glucose dehyd 27.1 53 0.0018 27.2 3.7 34 31-69 4-37 (478)
317 2xj4_A MIPZ; replication, cell 27.1 94 0.0032 23.3 4.9 36 38-73 7-43 (286)
318 2cfc_A 2-(R)-hydroxypropyl-COM 27.0 50 0.0017 23.9 3.2 21 52-72 15-35 (250)
319 1jay_A Coenzyme F420H2:NADP+ o 27.0 54 0.0019 23.2 3.4 32 37-72 2-33 (212)
320 3oou_A LIN2118 protein; protei 27.0 8.8 0.0003 24.6 -0.9 21 10-30 79-99 (108)
321 2rjn_A Response regulator rece 27.0 83 0.0028 20.5 4.2 26 141-166 45-72 (154)
322 1mv8_A GMD, GDP-mannose 6-dehy 26.9 74 0.0025 25.8 4.5 29 36-69 1-29 (436)
323 2wsb_A Galactitol dehydrogenas 26.9 50 0.0017 23.9 3.2 21 52-72 24-44 (254)
324 3r6d_A NAD-dependent epimerase 26.9 52 0.0018 23.3 3.3 32 37-72 7-39 (221)
325 1ooe_A Dihydropteridine reduct 26.9 41 0.0014 24.3 2.7 21 52-72 16-36 (236)
326 3ghy_A Ketopantoate reductase 26.8 45 0.0015 25.9 3.1 33 35-72 3-35 (335)
327 1zk4_A R-specific alcohol dehy 26.8 50 0.0017 23.9 3.2 21 52-72 19-39 (251)
328 1uls_A Putative 3-oxoacyl-acyl 26.8 50 0.0017 24.1 3.2 20 52-71 18-37 (245)
329 3orf_A Dihydropteridine reduct 26.8 50 0.0017 24.2 3.2 21 52-72 35-55 (251)
330 4gkb_A 3-oxoacyl-[acyl-carrier 26.8 2E+02 0.0068 21.5 7.6 35 36-73 7-41 (258)
331 4eso_A Putative oxidoreductase 26.7 1.1E+02 0.0036 22.5 5.1 33 37-72 9-41 (255)
332 2qzj_A Two-component response 26.7 64 0.0022 20.7 3.5 26 142-167 43-70 (136)
333 3uk7_A Class I glutamine amido 26.7 90 0.0031 24.8 5.0 54 19-73 189-242 (396)
334 1fjh_A 3alpha-hydroxysteroid d 26.7 50 0.0017 24.0 3.2 21 52-72 14-34 (257)
335 3l77_A Short-chain alcohol deh 26.6 51 0.0018 23.7 3.2 21 52-72 15-35 (235)
336 3vtf_A UDP-glucose 6-dehydroge 26.6 72 0.0025 26.4 4.4 32 33-69 19-50 (444)
337 3pef_A 6-phosphogluconate dehy 26.6 56 0.0019 24.6 3.6 32 36-72 2-33 (287)
338 3e1t_A Halogenase; flavoprotei 26.6 35 0.0012 28.2 2.5 34 35-73 7-40 (512)
339 2o23_A HADH2 protein; HSD17B10 26.5 51 0.0017 24.1 3.2 21 52-72 25-45 (265)
340 2o8n_A APOA-I binding protein; 26.4 56 0.0019 25.0 3.5 35 36-72 80-115 (265)
341 1yb4_A Tartronic semialdehyde 26.4 50 0.0017 24.7 3.2 31 35-70 3-33 (295)
342 3qsg_A NAD-binding phosphogluc 26.3 40 0.0014 26.0 2.7 33 35-72 24-57 (312)
343 4a1f_A DNAB helicase, replicat 26.3 1.4E+02 0.0049 23.4 6.0 45 35-79 46-90 (338)
344 1boo_A Protein (N-4 cytosine-s 26.3 31 0.0011 26.9 2.0 35 137-171 240-277 (323)
345 2jk1_A HUPR, hydrogenase trans 26.3 66 0.0023 20.6 3.5 26 142-167 39-66 (139)
346 2ekp_A 2-deoxy-D-gluconate 3-d 26.3 52 0.0018 23.8 3.2 21 52-72 15-35 (239)
347 3ego_A Probable 2-dehydropanto 26.2 44 0.0015 25.7 2.9 31 36-72 3-33 (307)
348 3cg0_A Response regulator rece 26.2 70 0.0024 20.3 3.6 25 142-166 49-76 (140)
349 2uvd_A 3-oxoacyl-(acyl-carrier 26.2 52 0.0018 23.9 3.2 20 52-71 17-36 (246)
350 3ius_A Uncharacterized conserv 26.2 39 0.0013 25.0 2.5 32 36-72 6-37 (286)
351 1o5i_A 3-oxoacyl-(acyl carrier 26.2 52 0.0018 24.1 3.2 20 52-71 32-51 (249)
352 3n7t_A Macrophage binding prot 26.2 1.7E+02 0.0059 21.8 6.2 39 35-73 9-58 (247)
353 2gdz_A NAD+-dependent 15-hydro 26.2 52 0.0018 24.3 3.2 21 52-72 20-40 (267)
354 1lld_A L-lactate dehydrogenase 26.1 47 0.0016 25.4 3.1 33 35-72 7-41 (319)
355 3kyj_B CHEY6 protein, putative 26.1 62 0.0021 20.9 3.4 25 141-165 53-80 (145)
356 3mn2_A Probable ARAC family tr 26.0 9.3 0.00032 24.5 -0.9 22 10-31 78-99 (108)
357 1lnq_A MTHK channels, potassiu 26.0 22 0.00075 27.6 1.1 32 35-72 115-146 (336)
358 1vl8_A Gluconate 5-dehydrogena 26.0 52 0.0018 24.5 3.2 21 52-72 34-54 (267)
359 2fwm_X 2,3-dihydro-2,3-dihydro 25.9 53 0.0018 24.0 3.2 20 52-71 20-39 (250)
360 3i1j_A Oxidoreductase, short c 25.8 54 0.0018 23.7 3.2 33 37-72 15-47 (247)
361 1iy8_A Levodione reductase; ox 25.8 53 0.0018 24.3 3.2 21 52-72 26-46 (267)
362 3dkr_A Esterase D; alpha beta 25.8 84 0.0029 21.7 4.2 36 36-72 23-58 (251)
363 2ag5_A DHRS6, dehydrogenase/re 25.7 54 0.0019 23.9 3.2 20 52-71 19-38 (246)
364 3d3w_A L-xylulose reductase; u 25.7 55 0.0019 23.6 3.2 21 52-72 20-40 (244)
365 3qiv_A Short-chain dehydrogena 25.5 55 0.0019 23.8 3.2 21 52-72 22-42 (253)
366 1uay_A Type II 3-hydroxyacyl-C 25.5 42 0.0014 24.1 2.5 21 52-72 15-35 (242)
367 3l6e_A Oxidoreductase, short-c 25.5 55 0.0019 23.8 3.2 21 52-72 16-36 (235)
368 1mxh_A Pteridine reductase 2; 25.4 54 0.0019 24.3 3.2 31 38-71 13-43 (276)
369 4gxt_A A conserved functionall 25.4 59 0.002 26.1 3.6 25 49-73 223-247 (385)
370 2ew8_A (S)-1-phenylethanol deh 25.4 55 0.0019 23.9 3.2 21 52-72 20-40 (249)
371 3dfi_A Pseudoaglycone deacetyl 25.4 1.2E+02 0.004 23.0 5.1 22 133-154 131-152 (270)
372 3cky_A 2-hydroxymethyl glutara 25.4 78 0.0027 23.7 4.2 32 35-71 4-35 (301)
373 1hdc_A 3-alpha, 20 beta-hydrox 25.3 55 0.0019 24.0 3.2 21 52-72 18-38 (254)
374 1xq1_A Putative tropinone redu 25.3 55 0.0019 24.0 3.2 21 52-72 27-47 (266)
375 3qha_A Putative oxidoreductase 25.3 48 0.0016 25.2 3.0 33 36-73 16-48 (296)
376 3imf_A Short chain dehydrogena 25.3 55 0.0019 24.1 3.2 33 37-72 7-39 (257)
377 3sxp_A ADP-L-glycero-D-mannohe 25.2 94 0.0032 23.9 4.7 34 35-72 10-45 (362)
378 2d1y_A Hypothetical protein TT 25.2 55 0.0019 24.0 3.2 21 52-72 19-39 (256)
379 2rdm_A Response regulator rece 25.2 1E+02 0.0035 19.2 4.3 27 141-167 43-73 (132)
380 2jah_A Clavulanic acid dehydro 25.2 56 0.0019 23.9 3.2 21 52-72 20-40 (247)
381 2xdo_A TETX2 protein; tetracyc 25.1 63 0.0021 25.4 3.7 33 35-72 26-58 (398)
382 2bgk_A Rhizome secoisolaricire 25.1 55 0.0019 24.1 3.2 22 51-72 28-49 (278)
383 3kkl_A Probable chaperone prot 25.1 1.5E+02 0.0051 22.0 5.6 24 50-73 29-52 (244)
384 2ph3_A 3-oxoacyl-[acyl carrier 25.1 49 0.0017 23.8 2.9 19 52-70 14-32 (245)
385 2z1n_A Dehydrogenase; reductas 25.0 56 0.0019 24.0 3.2 21 52-72 20-40 (260)
386 2q1s_A Putative nucleotide sug 25.0 80 0.0028 24.5 4.3 34 35-72 32-66 (377)
387 3ko8_A NAD-dependent epimerase 25.0 48 0.0017 24.8 2.9 32 37-72 2-33 (312)
388 1iow_A DD-ligase, DDLB, D-ALA\ 25.0 1.4E+02 0.0049 22.1 5.7 38 36-73 3-44 (306)
389 3ak4_A NADH-dependent quinucli 25.0 56 0.0019 24.0 3.2 20 52-71 25-44 (263)
390 1eg2_A Modification methylase 24.9 33 0.0011 26.8 2.0 34 138-171 231-267 (319)
391 1fmc_A 7 alpha-hydroxysteroid 24.9 52 0.0018 23.8 3.0 21 52-72 24-44 (255)
392 3ai3_A NADPH-sorbose reductase 24.9 57 0.0019 24.0 3.2 21 52-72 20-40 (263)
393 2ae2_A Protein (tropinone redu 24.8 57 0.0019 24.0 3.2 21 52-72 22-42 (260)
394 1k68_A Phytochrome response re 24.8 1.1E+02 0.0037 19.1 4.4 21 146-166 54-76 (140)
395 2jan_A Tyrosyl-tRNA synthetase 24.8 69 0.0024 26.4 3.9 34 37-71 36-72 (432)
396 3pfb_A Cinnamoyl esterase; alp 24.8 1.4E+02 0.0049 20.9 5.4 37 35-72 46-84 (270)
397 3fet_A Electron transfer flavo 24.7 70 0.0024 22.5 3.5 33 138-172 62-97 (166)
398 3rfo_A Methionyl-tRNA formyltr 24.7 1.1E+02 0.0038 23.9 5.0 33 35-72 4-36 (317)
399 3a4m_A L-seryl-tRNA(SEC) kinas 24.7 1.3E+02 0.0044 22.2 5.3 37 35-71 4-40 (260)
400 1xfi_A Unknown protein; struct 24.7 58 0.002 26.2 3.4 37 36-72 213-250 (367)
401 4ezb_A Uncharacterized conserv 24.7 57 0.0019 25.2 3.3 32 36-72 25-57 (317)
402 1a04_A Nitrate/nitrite respons 24.7 72 0.0025 22.3 3.7 24 144-167 48-73 (215)
403 2hq1_A Glucose/ribitol dehydro 24.7 55 0.0019 23.6 3.1 20 52-71 18-37 (247)
404 2z1m_A GDP-D-mannose dehydrata 24.6 49 0.0017 25.1 2.9 33 36-72 4-36 (345)
405 3h5i_A Response regulator/sens 24.6 1.1E+02 0.0036 19.6 4.3 21 146-166 49-72 (140)
406 2bru_C NAD(P) transhydrogenase 24.6 68 0.0023 23.2 3.3 36 36-73 31-71 (186)
407 3u5t_A 3-oxoacyl-[acyl-carrier 24.6 71 0.0024 23.8 3.8 33 37-72 28-60 (267)
408 4e6p_A Probable sorbitol dehyd 24.6 58 0.002 24.0 3.2 20 52-71 21-40 (259)
409 3hn7_A UDP-N-acetylmuramate-L- 24.6 81 0.0028 26.3 4.4 35 35-73 19-53 (524)
410 1qsg_A Enoyl-[acyl-carrier-pro 24.5 58 0.002 24.0 3.2 20 53-72 25-44 (265)
411 3dme_A Conserved exported prot 24.5 46 0.0016 25.4 2.7 33 35-72 4-36 (369)
412 3lyl_A 3-oxoacyl-(acyl-carrier 24.5 59 0.002 23.5 3.2 21 52-72 18-38 (247)
413 1k66_A Phytochrome response re 24.5 1.2E+02 0.0042 19.2 4.6 22 146-167 61-84 (149)
414 3ga2_A Endonuclease V; alpha-b 24.4 61 0.0021 24.6 3.3 26 147-172 109-141 (246)
415 3osu_A 3-oxoacyl-[acyl-carrier 24.4 59 0.002 23.7 3.2 21 52-72 17-37 (246)
416 3zxs_A Cryptochrome B, rscryb; 24.4 51 0.0017 28.0 3.1 24 48-71 65-88 (522)
417 3asu_A Short-chain dehydrogena 24.4 59 0.002 23.8 3.2 20 53-72 14-33 (248)
418 3k9g_A PF-32 protein; ssgcid, 24.4 69 0.0023 23.6 3.6 39 35-74 26-66 (267)
419 1geg_A Acetoin reductase; SDR 24.4 59 0.002 23.8 3.2 21 52-72 15-35 (256)
420 3f6c_A Positive transcription 24.4 70 0.0024 20.1 3.3 21 146-166 45-67 (134)
421 1hxh_A 3BETA/17BETA-hydroxyste 24.3 55 0.0019 24.0 3.1 21 51-71 18-38 (253)
422 3n53_A Response regulator rece 24.3 48 0.0016 21.3 2.5 17 143-159 42-58 (140)
423 3dii_A Short-chain dehydrogena 24.3 59 0.002 23.7 3.2 21 52-72 15-35 (247)
424 2qr3_A Two-component system re 24.3 72 0.0024 20.2 3.4 17 142-158 42-58 (140)
425 3n74_A 3-ketoacyl-(acyl-carrie 24.2 59 0.002 23.8 3.2 21 52-72 22-42 (261)
426 1spx_A Short-chain reductase f 24.2 59 0.002 24.1 3.2 21 52-72 19-39 (278)
427 2x4g_A Nucleoside-diphosphate- 24.2 54 0.0018 24.9 3.1 34 35-72 13-46 (342)
428 3igf_A ALL4481 protein; two-do 24.2 78 0.0027 25.4 4.1 36 36-71 2-38 (374)
429 2woo_A ATPase GET3; tail-ancho 24.2 1.3E+02 0.0046 23.1 5.4 39 36-74 19-58 (329)
430 2k9s_A Arabinose operon regula 24.1 11 0.00036 24.2 -0.9 21 10-30 78-98 (107)
431 3ek2_A Enoyl-(acyl-carrier-pro 24.1 60 0.002 23.8 3.2 21 52-72 29-49 (271)
432 3lk7_A UDP-N-acetylmuramoylala 24.1 1.2E+02 0.004 24.7 5.3 34 35-73 9-42 (451)
433 3l9w_A Glutathione-regulated p 24.1 39 0.0013 27.5 2.3 34 35-73 4-37 (413)
434 2nwq_A Probable short-chain de 24.1 59 0.002 24.3 3.2 32 38-72 23-54 (272)
435 2p4h_X Vestitone reductase; NA 24.0 51 0.0018 24.7 2.9 30 37-70 3-32 (322)
436 3bgw_A DNAB-like replicative h 24.0 1.4E+02 0.0049 24.2 5.8 45 35-79 197-241 (444)
437 2gf2_A Hibadh, 3-hydroxyisobut 24.0 64 0.0022 24.2 3.4 31 37-72 2-32 (296)
438 2c29_D Dihydroflavonol 4-reduc 24.0 54 0.0019 24.9 3.1 32 36-71 6-37 (337)
439 3o26_A Salutaridine reductase; 24.0 59 0.002 24.2 3.2 34 36-72 12-45 (311)
440 4eg0_A D-alanine--D-alanine li 24.0 1.8E+02 0.0063 21.9 6.2 37 36-73 14-55 (317)
441 1ja9_A 4HNR, 1,3,6,8-tetrahydr 24.0 60 0.0021 23.7 3.2 20 52-71 34-53 (274)
442 2b4a_A BH3024; flavodoxin-like 23.9 95 0.0032 19.7 3.9 28 140-167 52-82 (138)
443 1gee_A Glucose 1-dehydrogenase 23.9 61 0.0021 23.6 3.2 20 52-71 20-39 (261)
444 1uzm_A 3-oxoacyl-[acyl-carrier 23.9 61 0.0021 23.7 3.2 21 51-71 27-47 (247)
445 3bh0_A DNAB-like replicative h 23.9 1.7E+02 0.0058 22.4 5.9 45 35-79 68-112 (315)
446 4hv4_A UDP-N-acetylmuramate--L 23.9 1.1E+02 0.0039 25.2 5.2 34 35-72 22-55 (494)
447 3q9s_A DNA-binding response re 23.9 90 0.0031 22.7 4.2 27 141-167 75-103 (249)
448 2q62_A ARSH; alpha/beta, flavo 23.8 1.8E+02 0.0063 21.6 6.0 39 35-73 34-75 (247)
449 2dtx_A Glucose 1-dehydrogenase 23.8 61 0.0021 24.0 3.2 21 52-72 21-41 (264)
450 1xkq_A Short-chain reductase f 23.8 60 0.0021 24.2 3.2 32 38-72 8-39 (280)
451 1n57_A Chaperone HSP31, protei 23.8 1.8E+02 0.0063 22.1 6.1 61 13-73 20-99 (291)
452 3oio_A Transcriptional regulat 23.7 11 0.00036 24.5 -1.0 22 10-31 81-102 (113)
453 1h5q_A NADP-dependent mannitol 23.7 50 0.0017 24.1 2.7 20 52-71 27-46 (265)
454 1uxo_A YDEN protein; hydrolase 23.6 1.2E+02 0.004 20.3 4.6 37 36-72 5-42 (192)
455 3hdv_A Response regulator; PSI 23.6 1.4E+02 0.0048 18.7 5.0 35 34-72 6-40 (136)
456 2etv_A Iron(III) ABC transport 23.6 43 0.0015 26.1 2.4 26 147-172 96-122 (346)
457 2qvg_A Two component response 23.6 1.2E+02 0.004 19.2 4.4 22 146-167 58-81 (143)
458 3o38_A Short chain dehydrogena 23.6 62 0.0021 23.8 3.2 21 52-72 36-56 (266)
459 1zem_A Xylitol dehydrogenase; 23.6 62 0.0021 23.8 3.2 21 52-72 20-40 (262)
460 3m1a_A Putative dehydrogenase; 23.6 62 0.0021 24.0 3.2 21 52-72 18-38 (281)
461 3ppi_A 3-hydroxyacyl-COA dehyd 23.5 62 0.0021 24.1 3.2 33 36-71 30-62 (281)
462 2hrz_A AGR_C_4963P, nucleoside 23.5 60 0.0021 24.7 3.2 41 24-72 7-54 (342)
463 2ydy_A Methionine adenosyltran 23.4 49 0.0017 24.8 2.7 31 36-70 3-33 (315)
464 2iz6_A Molybdenum cofactor car 23.4 1.1E+02 0.0038 21.7 4.4 37 35-71 13-53 (176)
465 2p91_A Enoyl-[acyl-carrier-pro 23.4 62 0.0021 24.2 3.2 34 37-72 22-56 (285)
466 3lsg_A Two-component response 23.4 11 0.00037 23.9 -1.0 21 10-30 77-97 (103)
467 2qq5_A DHRS1, dehydrogenase/re 23.4 63 0.0022 23.7 3.2 20 52-71 18-37 (260)
468 1w6u_A 2,4-dienoyl-COA reducta 23.3 62 0.0021 24.2 3.2 21 52-72 39-59 (302)
469 2fuk_A XC6422 protein; A/B hyd 23.3 1.7E+02 0.0059 19.8 5.5 38 35-72 37-78 (220)
470 3f1l_A Uncharacterized oxidore 23.3 64 0.0022 23.6 3.2 33 37-72 13-45 (252)
471 2a4k_A 3-oxoacyl-[acyl carrier 23.3 63 0.0022 24.0 3.2 21 52-72 19-39 (263)
472 2q2v_A Beta-D-hydroxybutyrate 23.3 60 0.002 23.8 3.1 21 52-72 17-37 (255)
473 3rd5_A Mypaa.01249.C; ssgcid, 23.3 62 0.0021 24.2 3.2 21 52-72 29-49 (291)
474 4e5v_A Putative THUA-like prot 23.2 1.4E+02 0.0047 22.8 5.2 38 34-72 3-43 (281)
475 3ihm_A Styrene monooxygenase A 23.1 56 0.0019 26.2 3.1 32 36-72 23-54 (430)
476 3mkl_A HTH-type transcriptiona 23.1 11 0.00038 24.7 -1.0 22 10-31 80-101 (120)
477 3v76_A Flavoprotein; structura 23.1 80 0.0027 25.4 4.0 46 18-73 15-60 (417)
478 3gem_A Short chain dehydrogena 23.1 56 0.0019 24.3 2.9 33 38-73 29-61 (260)
479 2ywl_A Thioredoxin reductase r 23.1 56 0.0019 22.3 2.7 21 52-72 13-33 (180)
480 1edo_A Beta-keto acyl carrier 23.1 61 0.0021 23.3 3.1 21 52-72 14-34 (244)
481 3k7m_X 6-hydroxy-L-nicotine ox 23.1 54 0.0018 25.9 2.9 30 37-71 3-32 (431)
482 3op4_A 3-oxoacyl-[acyl-carrier 23.1 65 0.0022 23.6 3.2 33 37-72 10-42 (248)
483 2nm0_A Probable 3-oxacyl-(acyl 23.0 65 0.0022 23.8 3.2 20 52-71 34-53 (253)
484 3pk0_A Short-chain dehydrogena 22.9 65 0.0022 23.8 3.2 33 37-72 11-43 (262)
485 3la6_A Tyrosine-protein kinase 22.9 1.6E+02 0.0055 22.3 5.6 33 42-74 100-132 (286)
486 1u0t_A Inorganic polyphosphate 22.9 97 0.0033 23.8 4.3 38 35-72 4-42 (307)
487 1x1t_A D(-)-3-hydroxybutyrate 22.9 61 0.0021 23.8 3.1 21 52-72 17-37 (260)
488 1yde_A Retinal dehydrogenase/r 22.9 65 0.0022 24.0 3.2 20 52-71 22-41 (270)
489 3bos_A Putative DNA replicatio 22.8 1.6E+02 0.0055 20.6 5.4 40 35-74 52-91 (242)
490 1g60_A Adenine-specific methyl 22.8 39 0.0013 25.3 2.0 33 138-170 201-236 (260)
491 3nrn_A Uncharacterized protein 22.8 67 0.0023 25.4 3.5 19 53-71 13-31 (421)
492 1s8n_A Putative antiterminator 22.8 86 0.0029 21.7 3.8 26 142-167 53-80 (205)
493 4f0j_A Probable hydrolytic enz 22.8 1E+02 0.0035 22.1 4.3 37 35-72 46-82 (315)
494 3oig_A Enoyl-[acyl-carrier-pro 22.7 66 0.0023 23.6 3.2 21 52-72 22-42 (266)
495 3g79_A NDP-N-acetyl-D-galactos 22.7 1.1E+02 0.0038 25.4 4.8 35 35-74 18-54 (478)
496 3fgn_A Dethiobiotin synthetase 22.7 1.4E+02 0.0046 22.4 5.0 35 37-71 28-63 (251)
497 3dqz_A Alpha-hydroxynitrIle ly 22.7 85 0.0029 21.9 3.8 36 36-72 5-40 (258)
498 1ae1_A Tropinone reductase-I; 22.7 66 0.0022 23.9 3.2 21 52-72 34-54 (273)
499 1xg5_A ARPG836; short chain de 22.7 66 0.0022 23.9 3.2 21 52-72 45-65 (279)
500 2j9r_A Thymidine kinase; TK1, 22.7 2.2E+02 0.0074 20.9 6.0 45 29-73 21-66 (214)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.86 E-value=1.3e-21 Score=165.17 Aligned_cols=134 Identities=22% Similarity=0.335 Sum_probs=91.9
Q ss_pred hhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCC--CEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCC
Q 039991 23 LIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRG--VKASVITTPANTPYVSKSVERANELGIEMDVKTVKFP 100 (172)
Q Consensus 23 ~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rG--h~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~ 100 (172)
||-+ |+. .++.||+++|+|++||++||++|||+|++|| +.||+++++.+..++.+.... ..++++|+.+|
T Consensus 4 ~~~~--M~~-~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~---~~~~i~~~~ip-- 75 (454)
T 3hbf_A 4 FKNE--MNG-NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNE---FLPNIKYYNVH-- 75 (454)
T ss_dssp -----------CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSC---CCTTEEEEECC--
T ss_pred cccc--ccC-CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccccc---CCCCceEEecC--
Confidence 4555 443 3468999999999999999999999999999 999999987544333221100 12469998886
Q ss_pred CCCCCCCCCCCcccccchhhhHHHHHHHHHH-HHHhHHHHHHHhhh--CCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 101 SVEAGLPDGCENLDAITNEVNKELIVKFFGA-TTKLQEPLEQLLRD--HKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 101 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~--~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
+++|++.+...+ +. ..+..+.+. ...+.+.+++++++ .++||||+|++++|+.++|+++|||++
T Consensus 76 ---dglp~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~ 142 (454)
T 3hbf_A 76 ---DGLPKGYVSSGN-PR----EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWV 142 (454)
T ss_dssp ---CCCCTTCCCCSC-TT----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEE
T ss_pred ---CCCCCCccccCC-hH----HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEE
Confidence 467766543222 11 333444443 34566777776654 379999999999999999999999975
No 2
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.79 E-value=2.4e-19 Score=151.46 Aligned_cols=132 Identities=18% Similarity=0.254 Sum_probs=90.3
Q ss_pred CCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHC--CCEEEEEeCCCChh-hhhhhhhhhhcCCCCeEEEEeeCCCCCC
Q 039991 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTR--GVKASVITTPANTP-YVSKSVERANELGIEMDVKTVKFPSVEA 104 (172)
Q Consensus 28 ~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 104 (172)
.|+...++.||+++|+|++||++||++||++|++| ||+||+++++.+.. .+.+.+.+....+.+++|+.+|..
T Consensus 2 ~~~~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~---- 77 (463)
T 2acv_A 2 SMSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV---- 77 (463)
T ss_dssp -CHHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----
T ss_pred CcccCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----
Confidence 34432335799999999999999999999999999 99999999987532 122222221112346899888632
Q ss_pred CCCCCCCcccccchhhhHHHHHHHHHHHHHhHHHHHHHhhh---CCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 105 GLPDGCENLDAITNEVNKELIVKFFGATTKLQEPLEQLLRD---HKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 105 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.+|+. +... .. ... +......+.+.+++++++ .++||||+|.++.|+..+|+++|||++
T Consensus 78 ~~~~~-~~~~---~~---~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v 139 (463)
T 2acv_A 78 EPPPQ-ELLK---SP---EFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSY 139 (463)
T ss_dssp CCCCG-GGGG---SH---HHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEE
T ss_pred CCCcc-cccC---Cc---cHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEE
Confidence 23321 1111 11 111 333445566677777776 589999999999999999999999964
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.78 E-value=3.1e-19 Score=151.32 Aligned_cols=127 Identities=24% Similarity=0.423 Sum_probs=82.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCC-CCeEEEEeeCCCCCCCCCCCCCcc
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELG-IEMDVKTVKFPSVEAGLPDGCENL 113 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~-~~i~~~~l~~~~~~~~~p~~~~~~ 113 (172)
+.||+++|+|++||++||++||++|++|||+||+++++.+...+.+........+ ++++|+.+| +++|+.....
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~~~~~ 82 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPMEGDG 82 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC------
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCccccc
Confidence 5799999999999999999999999999999999999866444332210000001 368898886 2455411000
Q ss_pred cccchhhhHHHHHHHHHHH-HHhHHHHHHHhhh-------CCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 114 DAITNEVNKELIVKFFGAT-TKLQEPLEQLLRD-------HKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~-------~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.... . +..+.... ..+.+.+++++++ .++||||+|.++.|+..+|+++|||+|
T Consensus 83 ~~~~-----~-~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v 143 (482)
T 2pq6_A 83 DVSQ-----D-VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNV 143 (482)
T ss_dssp ---C-----C-HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEE
T ss_pred Ccch-----h-HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEE
Confidence 1001 1 11222222 3455666666553 489999999999999999999999975
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.76 E-value=5.7e-18 Score=143.69 Aligned_cols=123 Identities=22% Similarity=0.279 Sum_probs=83.5
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHC-CCEEEEEeCCCC--hhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTR-GVKASVITTPAN--TPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGC 110 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~--~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~ 110 (172)
+++||+++|+|++||++||++||++|++| ||+||+++++.+ ...+... .. ....+++|+.++.. ..++.
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~-~~--~~~~~i~~~~l~~~----~~~~~- 76 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTV-LD--SLPSSISSVFLPPV----DLTDL- 76 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHH-HC---CCTTEEEEECCCC----CCTTS-
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhh-cc--ccCCCceEEEcCCC----CCCCC-
Confidence 45799999999999999999999999998 999999999874 2222221 00 01246899888632 12221
Q ss_pred CcccccchhhhHHHHHHHHHHHHHhHHHHHHHhhh----CCC-CEEEecCCCccHHHHHHHhCCCCC
Q 039991 111 ENLDAITNEVNKELIVKFFGATTKLQEPLEQLLRD----HKP-DCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~-d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.. .. .....+......+.+.+++++++ .++ ||||+|.++.|+..+|+++|||+|
T Consensus 77 ~~---~~-----~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v 135 (480)
T 2vch_A 77 SS---ST-----RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPY 135 (480)
T ss_dssp CT---TC-----CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEE
T ss_pred CC---ch-----hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEE
Confidence 11 00 11122222334455666666654 378 999999999999999999999974
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.75 E-value=7.6e-18 Score=142.09 Aligned_cols=132 Identities=20% Similarity=0.323 Sum_probs=83.0
Q ss_pred CCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCC--EEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCC
Q 039991 29 MGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGV--KASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGL 106 (172)
Q Consensus 29 M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh--~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 106 (172)
|++..++.||+++|+|++||++|+++||++|++||| .||+++++.+...+...... ....+++++.++ +++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----DGV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----CCC
Confidence 444344689999999999999999999999999964 56888876432222111000 002368888875 355
Q ss_pred CCCCCcccccchhhhHHHHHHHHHHH-HHhHHHHHHHhhh--CCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 107 PDGCENLDAITNEVNKELIVKFFGAT-TKLQEPLEQLLRD--HKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 107 p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~--~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
|++.+... .. . ..+..+.+.. ..+.+.+++++++ .++||||+|.++.|+..+|+++|||+|
T Consensus 74 p~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v 137 (456)
T 2c1x_A 74 PEGYVFAG-RP-Q---EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWL 137 (456)
T ss_dssp CTTCCCCC-CT-T---HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEE
T ss_pred CCcccccC-Ch-H---HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEE
Confidence 55432111 11 1 2233333332 3455566665544 489999999999999999999999975
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.73 E-value=2.9e-17 Score=135.97 Aligned_cols=123 Identities=23% Similarity=0.299 Sum_probs=86.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCccc
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLD 114 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~ 114 (172)
++||+++++|++||++|+++||++|+++||+||+++++...+.+.+ . +++++.++. +++.+.....
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-------~--g~~~~~~~~-----~~~~~~~~~~ 77 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-------A--GATPVVYDS-----ILPKESNPEE 77 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------H--TCEEEECCC-----CSCCTTCTTC
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-------C--CCEEEecCc-----cccccccchh
Confidence 5799999999999999999999999999999999999865433322 2 377777652 2332211100
Q ss_pred ccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 115 AITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
..... ....+..+.+....+.+.+.+++++.+|||||+|.++.|+..+|+++|||++
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v 134 (424)
T 2iya_A 78 SWPED-QESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFV 134 (424)
T ss_dssp CCCSS-HHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEE
T ss_pred hcchh-HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEE
Confidence 00000 0022233333334556777888888899999999998999999999999975
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.72 E-value=3e-17 Score=134.26 Aligned_cols=136 Identities=17% Similarity=0.201 Sum_probs=80.0
Q ss_pred cCCCCC---CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCC
Q 039991 27 LNMGSE---IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVE 103 (172)
Q Consensus 27 ~~M~~~---~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 103 (172)
+||+++ -+.+||+|+++|++||++|+++||++|++|||+||+++++....... .++.+..+......
T Consensus 11 ~~~g~~~~~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~ 80 (400)
T 4amg_A 11 VDLGTENLYFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNY 80 (400)
T ss_dssp ----------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCS
T ss_pred ccCCcccCCCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhH
Confidence 677765 34689999999999999999999999999999999999886533211 13555554311000
Q ss_pred C--CCCCCCCcccccchhh-hHHHHH-HHHHHHHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 104 A--GLPDGCENLDAITNEV-NKELIV-KFFGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 104 ~--~~p~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
. ..+............. ...... .+..........+.+++++.+||+||+|.+..|+..+|+.+|||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~ 153 (400)
T 4amg_A 81 AKLFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCV 153 (400)
T ss_dssp HHHHSCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEE
T ss_pred hhhccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCce
Confidence 0 0011100000000000 001111 1222223344556667777899999999999999999999999964
No 8
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.58 E-value=1e-14 Score=118.93 Aligned_cols=123 Identities=22% Similarity=0.254 Sum_probs=82.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCccc
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLD 114 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~ 114 (172)
++||++++.++.||++|++.|+++|+++||+|++++++...+. +.. . +++++.++.... ..........
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~----~~~---~--G~~~~~~~~~~~--~~~~~~~~~~ 72 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADE----VKA---A--GAEVVLYKSEFD--TFHVPEVVKQ 72 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHH----HHH---T--TCEEEECCCGGG--TSSSSSSSCC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHH----HHH---c--CCEEEecccccc--cccccccccc
Confidence 4699999999999999999999999999999999998643322 221 2 377877753211 1110000000
Q ss_pred ccchhhhHHHHHH-HHHHHHHhHHHHHHHhhhCCCCEEEec-CCCccHHHHHHHhCCCCC
Q 039991 115 AITNEVNKELIVK-FFGATTKLQEPLEQLLRDHKPDCLVAD-IFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~d~VI~D-~~~~~a~~vA~~lgiP~v 172 (172)
... . ..+.. +..........+.+++++.+||+||+| .+..++..+|+++|||++
T Consensus 73 ~~~-~---~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v 128 (402)
T 3ia7_A 73 EDA-E---TQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAV 128 (402)
T ss_dssp TTH-H---HHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEE
T ss_pred cch-H---HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEE
Confidence 000 0 22222 333333455667778888899999999 788888999999999974
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.56 E-value=2.5e-14 Score=118.26 Aligned_cols=129 Identities=21% Similarity=0.298 Sum_probs=82.6
Q ss_pred CCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCC
Q 039991 29 MGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPD 108 (172)
Q Consensus 29 M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~ 108 (172)
|++...++||++++.++.||++|++.|+++|+++||+|+++++....+.+. ..+++++.++. .++.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~---------~~g~~~~~~~~-----~~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVA---------ATGPRPVLYHS-----TLPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH---------TTSCEEEECCC-----CSCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHH---------hCCCEEEEcCC-----cCcc
Confidence 443333579999999999999999999999999999999999886432221 12477776652 1222
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 109 GCENLDAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
+.......... ....+..+..........+.+++++.+||+||+|.+..|+..+|+++|||+|
T Consensus 67 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v 129 (430)
T 2iyf_A 67 PDADPEAWGST-LLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAV 129 (430)
T ss_dssp TTSCGGGGCSS-HHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred ccccccccchh-hHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEE
Confidence 11110000000 0012222222233455667778888899999999988888999999999974
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.55 E-value=7.3e-15 Score=120.88 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=84.3
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCc
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCEN 112 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~ 112 (172)
..++||+++++++.||++|++.|+++|+++||+|+++++....+.+.. . +++++.++.. ++.....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-------~--G~~~~~~~~~-----~~~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-------A--GATVVPYQSE-----IIDADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-------T--TCEEEECCCS-----TTTCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-------c--CCEEEecccc-----ccccccc
Confidence 346899999999999999999999999999999999997755433322 2 3778777532 2211100
Q ss_pred ---ccccchhhhHHHHHH-HHHHHHHhHHHHHHHhhhCCCCEEEec-CCCccHHHHHHHhCCCCC
Q 039991 113 ---LDAITNEVNKELIVK-FFGATTKLQEPLEQLLRDHKPDCLVAD-IFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 113 ---~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~d~VI~D-~~~~~a~~vA~~lgiP~v 172 (172)
..... . ..+.. +.+........+.+++++.+||+||+| .+..++..+|+++|||++
T Consensus 84 ~~~~~~~~-~---~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v 144 (415)
T 3rsc_A 84 EVFGSDDL-G---VRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAV 144 (415)
T ss_dssp HHHHSSSS-C---HHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEE
T ss_pred hhhccccH-H---HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEE
Confidence 00000 0 11222 333333455667778888899999999 788888899999999975
No 11
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.53 E-value=3.5e-14 Score=117.47 Aligned_cols=117 Identities=15% Similarity=0.211 Sum_probs=75.6
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCcccc
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLDA 115 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~~ 115 (172)
+||++++.++.||++|+++||++|++|||+||++++......+.. . +++++.++... .+.......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-------~--g~~~~~i~~~~-----~~~~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-------V--GVPHVPVGPSA-----RAPIQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------T--TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-------c--CCeeeeCCCCH-----HHHhhcccc
Confidence 589999999999999999999999999999999999864322221 2 47888776321 111111010
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhh-hCCCCEEEecC-CCcc--HHHHHHHhCCCCC
Q 039991 116 ITNEVNKELIVKFFGATTKLQEPLEQLLR-DHKPDCLVADI-FFPW--ATDAAAKFGIPRL 172 (172)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~~d~VI~D~-~~~~--a~~vA~~lgiP~v 172 (172)
.. . ..+..+.. ......++++.+ +.+|||||+|. +..| +..+|+++|||++
T Consensus 67 ~~-~---~~~~~~~~--~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v 121 (415)
T 1iir_A 67 LT-A---EDVRRFTT--EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYF 121 (415)
T ss_dssp CC-H---HHHHHHHH--HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEE
T ss_pred cc-h---HHHHHHHH--HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEE
Confidence 00 0 11111111 112334444443 45899999998 6778 8899999999975
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.45 E-value=3e-13 Score=111.78 Aligned_cols=118 Identities=16% Similarity=0.200 Sum_probs=73.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCcccc
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLDA 115 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~~ 115 (172)
+||++++.++.||++|+++||++|+++||+||+++++...+.+.. . +++++.++.... +.+... ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-------~--g~~~~~~~~~~~-~~~~~~---~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-------V--GVPHVPVGLPQH-MMLQEG---MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------H--TCCEEECSCCGG-GCCCTT---SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-------c--CCeeeecCCCHH-HHHhhc---ccc
Confidence 589999999999999999999999999999999998754332222 2 377887763210 111110 000
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhh-hCCCCEEEecC-CCcc--HHHHHHHhCCCCC
Q 039991 116 ITNEVNKELIVKFFGATTKLQEPLEQLLR-DHKPDCLVADI-FFPW--ATDAAAKFGIPRL 172 (172)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~~d~VI~D~-~~~~--a~~vA~~lgiP~v 172 (172)
... ..+..+.. ......++.+.+ ..+|||||+|. +..| +..+|+++|||++
T Consensus 68 -~~~---~~~~~~~~--~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v 122 (416)
T 1rrv_A 68 -PPP---EEEQRLAA--MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFF 122 (416)
T ss_dssp -CCH---HHHHHHHH--HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEE
T ss_pred -chh---HHHHHHHH--HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEE
Confidence 000 11111111 111222233321 45899999997 4566 7899999999975
No 13
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.40 E-value=1.3e-12 Score=107.04 Aligned_cols=122 Identities=19% Similarity=0.208 Sum_probs=82.4
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCC--
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGC-- 110 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~-- 110 (172)
.+++||++++.++.||++|++.|+++|.++||+|+++++ ...+.+.. .++.++.++... .+....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~---~~~~~~~~ 84 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDY---SAVKVFEQ 84 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTC---CHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCcc---CHHHHhhh
Confidence 345899999999999999999999999999999999998 54332221 247777775210 000000
Q ss_pred --------------CcccccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 111 --------------ENLDAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 111 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
....... .....+......+...+.+++++.+||+||+|....++..+|+.+|||++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v 155 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLE-----EWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAV 155 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGG-----GGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred cccCCccccccccCChhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEE
Confidence 0000000 11111222334556777888888899999999888888899999999975
No 14
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.38 E-value=2.2e-12 Score=105.72 Aligned_cols=130 Identities=15% Similarity=0.184 Sum_probs=81.3
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCC----C
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLP----D 108 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p----~ 108 (172)
+.++||++++.++.||++|++.|+++|+++||+|++++++...+.+.. . ++.++.++.......+. .
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-------~--G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-------A--GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-------T--TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-------C--CCeeEecCCccchHhhhhhhcc
Confidence 346899999999999999999999999999999999998644332222 2 36777775210000000 0
Q ss_pred C-CCcccccchhhhHHHHH-HHHHHHHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 109 G-CENLDAITNEVNKELIV-KFFGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 109 ~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
+ .......... ...... .+......+...+.+++++.+||+||+|....++..+|+.+|||++
T Consensus 84 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v 148 (398)
T 4fzr_A 84 GNRTTMPREEKP-LLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWI 148 (398)
T ss_dssp SCBCCCCSSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEE
T ss_pred Ccccccccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEE
Confidence 0 0000000000 001111 1122223445667777888899999999988888899999999974
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.38 E-value=3.1e-12 Score=104.19 Aligned_cols=123 Identities=14% Similarity=0.214 Sum_probs=78.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCC-------CCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEA-------GLPD 108 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-------~~p~ 108 (172)
+||++++.++.||++|++.|+++|+++||+|+++++....+.+.. . +++++.++.....+ ..|.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-------~--g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-------V--GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------T--TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-------C--CCEEEEeCCcchHHHHhhhcccCcc
Confidence 489999999999999999999999999999999998754222211 2 36777665210000 0111
Q ss_pred CCCcccccchhhhHHHH-HH-HHHHHHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 109 GCENLDAITNEVNKELI-VK-FFGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 109 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.... . ... ...+ .. +..........+.+++++.+||+||+|.+..++..+|+.+|||++
T Consensus 72 ~~~~-~--~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v 132 (384)
T 2p6p_A 72 AIPS-D--PVA--QARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHA 132 (384)
T ss_dssp CCCC-S--HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEE
T ss_pred ccCc-c--hHH--HHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEE
Confidence 0000 0 000 0111 11 111222334455666777799999999988888899999999974
No 16
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.37 E-value=1.5e-12 Score=108.49 Aligned_cols=130 Identities=20% Similarity=0.233 Sum_probs=79.2
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCC--C
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGC--E 111 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~--~ 111 (172)
.++||++++.++.||++|+++|+++|+++||+|++++++...+ .+. ..+++++.++...+..++.... .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~----~v~-----~~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTE----DIT-----AAGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHH----HHH-----TTTCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHH----HHH-----hCCCceeecCCccchHHHhhhhhcc
Confidence 3579999999999999999999999999999999999875432 221 1247888775321000000000 0
Q ss_pred c------cc--c-cchhhhHHHHHHHHHHH----H-----H-hHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 112 N------LD--A-ITNEVNKELIVKFFGAT----T-----K-LQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 112 ~------~~--~-~~~~~~~~~~~~~~~~~----~-----~-~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
. .+ . .+....+..+....... . . ....+.+++++.+||+||+|.+..++..+|+++|||++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEE
Confidence 0 00 0 00000001111111111 1 1 33444556677799999999988888999999999975
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.33 E-value=6.1e-12 Score=102.55 Aligned_cols=125 Identities=10% Similarity=0.139 Sum_probs=77.1
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEe-eCCCCC-----CCCCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTV-KFPSVE-----AGLPDG 109 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~~-----~~~p~~ 109 (172)
+||+++..++.||++|++.|+++|.++||+|+++++....+ .+.. . +++++.+ ..+... ...+..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~----~~~~---~--g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQA----TAHG---A--GLTTAGIRGNDRTGDTGGTTQLRFP 72 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHH----HHHH---B--TCEEEEC--------------CCSC
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHH----HHHh---C--CCceeeecCCccchhhhhhhccccc
Confidence 68999999999999999999999999999999999753322 2211 2 3666666 211000 000100
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHh-------HHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 110 CENLDAITNEVNKELIVKFFGATTKL-------QEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.......... .....+......+ ...+.+++++.+||+||+|.+..++..+|+.+|||++
T Consensus 73 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v 139 (391)
T 3tsa_A 73 NPAFGQRDTE---AGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVV 139 (391)
T ss_dssp CGGGGCTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEE
T ss_pred ccccccccch---hHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEE
Confidence 0000000000 1111111112223 5667778888899999999877778889999999974
No 18
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.26 E-value=7.2e-12 Score=103.43 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=72.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCcccc
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLDA 115 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~~ 115 (172)
+||++++.++.||++|++.|+++|.++||+|+++++....+.+.. . ++.+..++.... .. .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-------~--g~~~~~l~~~~~--~~-~~~~~~~- 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-------V--GVPMVPVGRAVR--AG-AREPGEL- 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-------T--TCCEEECSSCSS--GG-GSCTTCC-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-------c--CCceeecCCCHH--HH-hccccCC-
Confidence 579999999999999999999999999999999998754332222 2 377777753211 11 0000000
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCCccH---HHHHHHhCCCCC
Q 039991 116 ITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFFPWA---TDAAAKFGIPRL 172 (172)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~a---~~vA~~lgiP~v 172 (172)
.. .....+..........+.++++ ++|+||+|....++ ..+|+++|||++
T Consensus 68 ~~-----~~~~~~~~~~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v 120 (404)
T 3h4t_A 68 PP-----GAAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYR 120 (404)
T ss_dssp CT-----TCGGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEE
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEE
Confidence 00 0001111122222333333333 69999999765554 689999999975
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.15 E-value=1.1e-10 Score=95.49 Aligned_cols=125 Identities=19% Similarity=0.248 Sum_probs=80.0
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCC----------
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSV---------- 102 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~---------- 102 (172)
..++||++++.++.||++|++.|+++|.++||+|+++++.... ..+.. . +++++.++....
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~----~~~~~---~--g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFA----GTLRK---L--GFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGH----HHHHH---T--TCEEEECCCCHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHH----HHHHh---c--CCceeecCcccccchhhhhhhh
Confidence 3468999999999999999999999999999999999987432 22221 2 377777652000
Q ss_pred --CCCCCCCCCcccccchhhhHHHHHHHHHH-HHHhHHHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 103 --EAGLPDGCENLDAITNEVNKELIVKFFGA-TTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 103 --~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
....+. ........ .....+... .......+.+++++.+||+||+|....++..+|+.+|||+|
T Consensus 89 ~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v 155 (412)
T 3otg_A 89 FDTDSPEG-LTPEQLSE-----LPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTI 155 (412)
T ss_dssp HSCSCCTT-CCHHHHTT-----SHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred hcccCCcc-CChhHhhH-----HHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEE
Confidence 000010 00000000 001111111 22344566777888899999999877778889999999974
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.86 E-value=9.7e-09 Score=83.81 Aligned_cols=115 Identities=19% Similarity=0.243 Sum_probs=67.4
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCcccc
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLDA 115 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~~ 115 (172)
.+|++.....-||++|.+.||++|.++||+|+|+++....+ ...+.. . ++.++.++.. +++... ..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e--~~~v~~---~--g~~~~~i~~~----~~~~~~-~~-- 68 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIE--NDLVPK---A--GLPLHLIQVS----GLRGKG-LK-- 68 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH--HHHTGG---G--TCCEEECC-----------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh--hchhhh---c--CCcEEEEECC----CcCCCC-HH--
Confidence 47887776555999999999999999999999999775322 111111 2 3667666522 222110 00
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCCcc--HHHHHHHhCCCCC
Q 039991 116 ITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFFPW--ATDAAAKFGIPRL 172 (172)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~--a~~vA~~lgiP~v 172 (172)
..+...++....+ ....+++++.+||+||.+..... +...|..+|||+|
T Consensus 69 -------~~~~~~~~~~~~~-~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~v 119 (365)
T 3s2u_A 69 -------SLVKAPLELLKSL-FQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLV 119 (365)
T ss_dssp -----------CHHHHHHHH-HHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEE
T ss_pred -------HHHHHHHHHHHHH-HHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEE
Confidence 1111111111111 12346778889999999965544 4567888999974
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.21 E-value=1.2e-05 Score=64.19 Aligned_cols=115 Identities=17% Similarity=0.224 Sum_probs=70.2
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCcccc
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENLDA 115 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~~~ 115 (172)
++|+++.....||..++..|++.|+++||+|++++...... ...+. ..+++++.++.. .++.. .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~-----~~g~~~~~~~~~----~~~~~--~--- 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVP-----KHGIEIDFIRIS----GLRGK--G--- 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGG-----GGTCEEEECCCC----CCTTC--C---
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhcc-----ccCCceEEecCC----ccCcC--c---
Confidence 78998886666999999999999999999999999875321 11111 123677666422 12110 0
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCC--ccHHHHHHHhCCCCC
Q 039991 116 ITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFF--PWATDAAAKFGIPRL 172 (172)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~--~~a~~vA~~lgiP~v 172 (172)
. . ..+....... .....+.+++++.+||+|+++... .++..++..+|+|+|
T Consensus 71 -~-~---~~~~~~~~~~-~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 71 -I-K---ALIAAPLRIF-NAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVV 123 (364)
T ss_dssp -H-H---HHHTCHHHHH-HHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEE
T ss_pred -c-H---HHHHHHHHHH-HHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEE
Confidence 0 0 1111011111 122344566777799999998643 234567788899974
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.87 E-value=0.013 Score=47.09 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=30.3
Q ss_pred cceEEEEcCC----C-ccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFM----A-HGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p----~-~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+++|+++..- . .|--.-+..|++.|+++||+|+++++..
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 5788876622 3 3555678999999999999999999664
No 23
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.46 E-value=0.02 Score=47.47 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=31.6
Q ss_pred cceEEEEcC---C------------CccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPF---M------------AHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~---p------------~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+++|+++.. | ..|.-..+..|++.|+++||+|++++...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 60 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRI 60 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCC
Confidence 578888764 2 24677889999999999999999999764
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=95.22 E-value=0.17 Score=40.09 Aligned_cols=110 Identities=14% Similarity=0.099 Sum_probs=57.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC-CCEEEEEeCCCChhhhhhhhhhhhcCCCCeEE-EEeeCCCCCCCCCCCCCc
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR-GVKASVITTPANTPYVSKSVERANELGIEMDV-KTVKFPSVEAGLPDGCEN 112 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~p~~~~~ 112 (172)
+++|+++... .+.......|+++|.++ ||+|.++++............. .++.+ ..++ +.. ..
T Consensus 5 mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~--~~ 69 (376)
T 1v4v_A 5 MKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL-----FGIQEDRNLD-------VMQ--ER 69 (376)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT-----TTCCCSEECC-------CCS--SC
T ss_pred ceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHH-----cCCCcccccc-------cCC--CC
Confidence 5788877632 33445567889999998 8998887765432211111111 11222 1221 111 00
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEe--cCCCcc-HHHHHHHhCCCCC
Q 039991 113 LDAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVA--DIFFPW-ATDAAAKFGIPRL 172 (172)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~--D~~~~~-a~~vA~~lgiP~v 172 (172)
.. ....+. .....+.+++++.+||+|++ +....+ +..+|..+|+|++
T Consensus 70 ---~~------~~~~~~----~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v 119 (376)
T 1v4v_A 70 ---QA------LPDLAA----RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVG 119 (376)
T ss_dssp ---CC------HHHHHH----HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEE
T ss_pred ---cc------HHHHHH----HHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEE
Confidence 00 001111 11234556777889999998 322333 4567888899964
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=94.99 E-value=0.15 Score=41.55 Aligned_cols=120 Identities=17% Similarity=0.163 Sum_probs=60.5
Q ss_pred chhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHC-CCEEEEEeCCCChhhhhhhhhhhhcCCCCeE-EE
Q 039991 18 SLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTR-GVKASVITTPANTPYVSKSVERANELGIEMD-VK 95 (172)
Q Consensus 18 ~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~-~~ 95 (172)
.+|.||+. |+ +++|+++. .....+.-+.+|.++|.++ |+++.++.+....+.....++. .+ ++ ..
T Consensus 15 ~~~~~~~~---~~----m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~---~~--i~~~~ 81 (396)
T 3dzc_A 15 TENLYFQS---NA----MKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL---FS--ITPDF 81 (396)
T ss_dssp ------------C----CEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH---TT--CCCSE
T ss_pred cchhhHHh---CC----CCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh---cC--CCCce
Confidence 46778776 32 35777665 4557788889999999987 8898766665432211111111 11 21 01
Q ss_pred EeeCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEe--cCCCcc-HHHHHHHhCCCCC
Q 039991 96 TVKFPSVEAGLPDGCENLDAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVA--DIFFPW-ATDAAAKFGIPRL 172 (172)
Q Consensus 96 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~--D~~~~~-a~~vA~~lgiP~v 172 (172)
.+. +-.. . ... ... .......+.+++++.+||+|++ |....+ +...|..+|||++
T Consensus 82 ~l~-------~~~~----~--~~~-----~~~----~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~ 139 (396)
T 3dzc_A 82 DLN-------IMEP----G--QTL-----NGV----TSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVG 139 (396)
T ss_dssp ECC-------CCCT----T--CCH-----HHH----HHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEE
T ss_pred eee-------cCCC----C--CCH-----HHH----HHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEE
Confidence 111 0000 0 000 111 1233445667778889998886 333334 4678889999964
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=94.85 E-value=0.2 Score=39.56 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=62.4
Q ss_pred cceEEEEcC--C--CccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCC
Q 039991 35 QLHVFFFPF--M--AHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKSVERANELGIEMDVKTVKFPSVEAGLPDGC 110 (172)
Q Consensus 35 ~~~Ilv~p~--p--~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~ 110 (172)
+++|+++.. + ..|.-.-+..|++.| +||+|++++........... . ...++.+..++.. ..
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-~----~~~~~~~~~~~~~-------~~- 68 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-D----KTLDYEVIRWPRS-------VM- 68 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-H----TTCSSEEEEESSS-------SC-
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-c----cccceEEEEcccc-------cc-
Confidence 567887653 2 347888899999999 79999999988654321111 1 1224666666421 00
Q ss_pred CcccccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEecCCCcc--HHHHHHHhCCC
Q 039991 111 ENLDAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVADIFFPW--ATDAAAKFGIP 170 (172)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~D~~~~~--a~~vA~~lgiP 170 (172)
... . .....+.+++++.++|+|++...... ...++.++|+|
T Consensus 69 -----~~~----~----------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~ 111 (394)
T 3okp_A 69 -----LPT----P----------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGAS 111 (394)
T ss_dssp -----CSC----H----------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCS
T ss_pred -----ccc----h----------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCC
Confidence 010 0 11123456667779999998654433 45678888988
No 27
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=94.84 E-value=0.24 Score=39.47 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=29.9
Q ss_pred ceEEEEcCCCc-cchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAH-GHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~-GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..+....+|.. |.-.-...|++.|+++||+|++++...
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 54 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGL 54 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46676666665 666888899999999999999999864
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=94.69 E-value=0.063 Score=42.59 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=27.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCC-EEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGV-KASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh-~Vt~it~~ 72 (172)
++|+++.. ..++...+..|+++|.++|+ ++.++.+.
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~ 37 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTA 37 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 46777653 35778888999999999994 88776554
No 29
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=93.70 E-value=0.089 Score=42.48 Aligned_cols=41 Identities=15% Similarity=0.307 Sum_probs=33.3
Q ss_pred CcceEEEEcC---C--------CccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 34 PQLHVFFFPF---M--------AHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 34 ~~~~Ilv~p~---p--------~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
++++|+++.. | ..|+-..+..|++.|+++||+|++++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~ 70 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATR 70 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 4689998874 2 248888999999999999999999997643
No 30
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=92.65 E-value=1.4 Score=34.42 Aligned_cols=39 Identities=13% Similarity=0.137 Sum_probs=29.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC-C-CEEEEEeCCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR-G-VKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r-G-h~Vt~it~~~~ 74 (172)
+++|+++. ...++......++++|.++ | |+|.++++...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~ 48 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH 48 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence 47888876 3357788888999999987 5 88887776543
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=92.61 E-value=0.51 Score=38.45 Aligned_cols=110 Identities=10% Similarity=0.112 Sum_probs=57.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC--CCEEEEEeCCCChhhhhhhhhhhhcCCCCeEE-EEeeCCCCCCCCCCCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR--GVKASVITTPANTPYVSKSVERANELGIEMDV-KTVKFPSVEAGLPDGCE 111 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~p~~~~ 111 (172)
+++|+++. .....+.-+..|.++|.++ |+++.++.+....+.....++. .+ ++. ..+. +-..
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~---~~--i~~~~~l~-------v~~~-- 91 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI---FD--IKPDIDLD-------IMKK-- 91 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH---TT--CCCSEECC-------CCC---
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh---cC--CCCCcccc-------cCCC--
Confidence 35777766 3456788889999999987 6888766655331111111111 11 210 1110 1000
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEe--cCCCcc-HHHHHHHhCCCCC
Q 039991 112 NLDAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVA--DIFFPW-ATDAAAKFGIPRL 172 (172)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~--D~~~~~-a~~vA~~lgiP~v 172 (172)
. ... ... .......+.+++++.+||+|++ |....+ +...|.++|||++
T Consensus 92 --~--~~~-----~~~----~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~ 142 (403)
T 3ot5_A 92 --G--QTL-----AEI----TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG 142 (403)
T ss_dssp --C--CCH-----HHH----HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE
T ss_pred --C--CCH-----HHH----HHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE
Confidence 0 000 111 1233445667778889998886 223333 4678899999963
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=90.74 E-value=0.4 Score=37.31 Aligned_cols=28 Identities=11% Similarity=0.226 Sum_probs=24.6
Q ss_pred ccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 46 HGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 46 ~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.|.-.-...|++.|.++||+|++++...
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4667788999999999999999999774
No 33
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=90.69 E-value=0.26 Score=39.55 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=31.5
Q ss_pred cceEEEE-cCCC-ccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFF-PFMA-HGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~-p~p~-~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+++|+++ +.+. .|+-..+..|++.|+++||+|++++....
T Consensus 40 ~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 40 GRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred ccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 4677754 4443 47888899999999999999999987654
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=90.39 E-value=0.28 Score=38.45 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=28.7
Q ss_pred eEEEEc---CCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFP---FMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p---~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|+++. .|..|.-.-+..|++.|+++||+|++++..
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 40 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQS 40 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecC
Confidence 466553 244577788999999999999999999976
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=90.13 E-value=0.49 Score=37.46 Aligned_cols=41 Identities=12% Similarity=0.189 Sum_probs=31.5
Q ss_pred CcceEEEEcC---CC-ccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 34 PQLHVFFFPF---MA-HGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 34 ~~~~Ilv~p~---p~-~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
++++|+++.. +. .|.-.-+..|++.|+++||+|++++....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 3678887763 22 46668899999999999999999998754
No 36
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=88.69 E-value=1.2 Score=32.91 Aligned_cols=48 Identities=8% Similarity=-0.031 Sum_probs=40.5
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhh
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKS 81 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~ 81 (172)
++.+|++.+.++..|-....-++..|..+|++|.++......+.+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 356899999999999999999999999999999999987555544433
No 37
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=88.66 E-value=0.26 Score=40.36 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=29.6
Q ss_pred CcceEEEEcCC-Cc----cchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFM-AH----GHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p-~~----GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+++|+++... .. |=.+.+..|+++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 35788755432 22 333568999999999999999999864
No 38
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.88 E-value=0.67 Score=39.33 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=29.6
Q ss_pred CcceEEEEc---CCC--ccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFP---FMA--HGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p---~p~--~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..+||+++. .|. .|=+ .-+-.|+++|+++||+|+++++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 468999885 232 2433 45778999999999999999965
No 39
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=86.53 E-value=0.77 Score=37.55 Aligned_cols=38 Identities=11% Similarity=0.105 Sum_probs=28.0
Q ss_pred ceEEEEcC---C---CccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPF---M---AHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~---p---~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++.. | ..|=-.-+..|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 36676643 2 22444677899999999999999999764
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=86.51 E-value=0.69 Score=37.55 Aligned_cols=110 Identities=19% Similarity=0.176 Sum_probs=61.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChh-hhhhhhhhhhcCCCCeEEEEeeCCCCCCCCCCCCCcc
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTP-YVSKSVERANELGIEMDVKTVKFPSVEAGLPDGCENL 113 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~p~~~~~~ 113 (172)
+.+++++. ..+--+.-|.+|.++|.++ ++..++.+....+ .+..... .+ +.+ +.++ -.+..+
T Consensus 9 ~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~--~~i---~~~~--~~l~~~---- 71 (385)
T 4hwg_A 9 MLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DD--MGI---RKPD--YFLEVA---- 71 (385)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C---CCC---CCCS--EECCCC----
T ss_pred hhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hh--CCC---CCCc--eecCCC----
Confidence 34555543 5678889999999999887 9988887774322 1211110 01 111 1110 011111
Q ss_pred cccchhhhHHHHHHHHHHHHHhHHHHHHHhhhCCCCEEEe--cCCCccHHHHHHHhCCCCC
Q 039991 114 DAITNEVNKELIVKFFGATTKLQEPLEQLLRDHKPDCLVA--DIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~d~VI~--D~~~~~a~~vA~~lgiP~v 172 (172)
+ ... .+........+++++++.+||+|+. |....++...|.++|||++
T Consensus 72 ~--~~~---------~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~ 121 (385)
T 4hwg_A 72 A--DNT---------AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIF 121 (385)
T ss_dssp C--CCS---------HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEE
T ss_pred C--CCH---------HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEE
Confidence 0 000 0111234455677788889998776 4455556788899999963
No 41
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=86.16 E-value=3 Score=31.07 Aligned_cols=49 Identities=10% Similarity=-0.049 Sum_probs=40.7
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhhh
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSKS 81 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~ 81 (172)
.++.+|++.+.++-.|-....-++..|..+|++|.++...-..+.+...
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~ 138 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEE 138 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHH
Confidence 3457999999999999999999999999999999999987665555433
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=85.97 E-value=0.93 Score=37.05 Aligned_cols=38 Identities=18% Similarity=0.153 Sum_probs=27.7
Q ss_pred ceEEEEcC---C--Cc-cchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPF---M--AH-GHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~---p--~~-GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++.. | .. |=-.-...|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 36676653 2 23 334567889999999999999999764
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=85.43 E-value=1.5 Score=39.33 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=18.3
Q ss_pred CCCEEEecCCCc--cHHHHHHHhCCCCC
Q 039991 147 KPDCLVADIFFP--WATDAAAKFGIPRL 172 (172)
Q Consensus 147 ~~d~VI~D~~~~--~a~~vA~~lgiP~v 172 (172)
+||+|.+-.... .+..++..+|+|.|
T Consensus 407 ~PDVIHsH~~~sglva~llar~~gvP~V 434 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKLGVTQC 434 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHHTCCEE
T ss_pred CCeEEEeCCchHHHHHHHHHHHcCCCEE
Confidence 799998764221 14578899999964
No 44
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=85.09 E-value=1.5 Score=31.03 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=31.3
Q ss_pred CCCCCCcceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 29 MGSEIPQLHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 29 M~~~~~~~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
|.+++++.-++++..|-.-=. --.+=|+..|..+||+|++..++..
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAA 47 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAA 47 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHH
Confidence 455454555567888877444 4557788999999999999998854
No 45
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=84.09 E-value=3.5 Score=31.47 Aligned_cols=48 Identities=13% Similarity=-0.041 Sum_probs=40.2
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhh
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSK 80 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~ 80 (172)
..+.+|++.+.++..|-....-++..|.++|++|.++......+.+..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~ 168 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLA 168 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 346789999999999999999999999999999999987655444433
No 46
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=83.84 E-value=1.4 Score=33.86 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=23.5
Q ss_pred chhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 18 SLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 18 ~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
-|++||++.+.+....-..++++++..+.| --.++|++|+++|++|.++.-.
T Consensus 15 ~~~l~~~~~~~~~~~~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 66 (281)
T 4dry_A 15 TENLYFQSMMAQGKGSGEGRIALVTGGGTG---VGRGIAQALSAEGYSVVITGRR 66 (281)
T ss_dssp -------------------CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred cceEEEeccccccCCCCCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 488999887665432223456666644332 3468899999999999887643
No 47
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=83.84 E-value=2.8 Score=29.68 Aligned_cols=47 Identities=13% Similarity=0.070 Sum_probs=39.8
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhh
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSK 80 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~ 80 (172)
++.+|++.+.++-.|-.-..-++..|..+|++|.++......+.+..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~ 63 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAM 63 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 46789999999999999999999999999999999987755444443
No 48
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=80.31 E-value=2.7 Score=28.36 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=23.3
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh---CCCCC
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF---GIPRL 172 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l---giP~v 172 (172)
+++++.+||+||.|..++. |..+++++ ++|++
T Consensus 47 ~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI 83 (123)
T 2lpm_A 47 DIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFI 83 (123)
T ss_dssp HHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSC
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEE
Confidence 4566779999999998876 56666554 67754
No 49
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=80.29 E-value=1.9 Score=32.95 Aligned_cols=33 Identities=15% Similarity=0.340 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
|+|+|.. +.|-+- .+|+++|.++||+|+.++-.
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4677765 334442 46889999999999998743
No 50
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=78.09 E-value=4.3 Score=27.79 Aligned_cols=46 Identities=11% Similarity=0.059 Sum_probs=38.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhhh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVSK 80 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~ 80 (172)
+.+|++.+.++-+|-....-++..|..+|++|.++......+.+..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~ 48 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIK 48 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 4688888888999999999999999999999999987655444433
No 51
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=75.34 E-value=23 Score=28.48 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=21.9
Q ss_pred HHHHhhhCCCCEEEe--cCCCccHHHHHHHhCCCC
Q 039991 139 LEQLLRDHKPDCLVA--DIFFPWATDAAAKFGIPR 171 (172)
Q Consensus 139 l~~ll~~~~~d~VI~--D~~~~~a~~vA~~lgiP~ 171 (172)
+.++.++.++|.|+. |.....+..++++||+|.
T Consensus 67 ~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 67 VRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 445556678998874 333334567889999884
No 52
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=71.25 E-value=6.7 Score=28.95 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=30.8
Q ss_pred ceEEEEcCCCccchH-HHHHHHHHHHHCCCEEEEEeCCCChh
Q 039991 36 LHVFFFPFMAHGHMI-PIVDMAKLFVTRGVKASVITTPANTP 76 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~-P~l~La~~La~rGh~Vt~it~~~~~~ 76 (172)
.+|++.-..+ +... -...|.++|.++|++|.++.++....
T Consensus 8 k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 8 KHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp CEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 5666655444 5555 78999999999999999999886543
No 53
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=70.98 E-value=9.1 Score=28.43 Aligned_cols=41 Identities=10% Similarity=0.011 Sum_probs=32.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTP 76 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~ 76 (172)
+.+|++.-..+.|-+. ...|.+.|.++|++|.++.++....
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~ 44 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQL 44 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHH
Confidence 4577766666666665 8999999999999999999885443
No 54
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=70.23 E-value=3.4 Score=33.32 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=23.7
Q ss_pred cceEEEEc---CCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFP---FMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p---~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+++. +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 57788765 44 222122345788899999 99999543
No 55
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=70.01 E-value=11 Score=28.46 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=35.9
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+.+|++..-||.|--.-++.+|.+|+++|++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3578889999999999999999999999999998888765
No 56
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=69.92 E-value=30 Score=25.33 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=35.1
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+..|.++..+|.|--.-.+.+|.+.+.+|.+|-++..-.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 468999999999999999999999999999999996543
No 57
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=69.62 E-value=6 Score=27.15 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=26.5
Q ss_pred CCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 28 ~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.|.......+|+++. .|.+- ..+++.|.++|++|+++...
T Consensus 12 ~~~~~~~~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -----CCCCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred hhhcccCCCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 465444567899885 35543 45788899999999999765
No 58
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=66.15 E-value=8.5 Score=27.74 Aligned_cols=42 Identities=10% Similarity=0.093 Sum_probs=30.9
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYV 78 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 78 (172)
.||++.-..+.|=+ -...|.++|.++|++|.++.++.....+
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 46665554454444 5899999999999999999998654433
No 59
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=65.87 E-value=8.3 Score=28.20 Aligned_cols=36 Identities=11% Similarity=-0.059 Sum_probs=25.7
Q ss_pred cceEEEEcCCC---ccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 35 QLHVFFFPFMA---HGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 35 ~~~Ilv~p~p~---~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
++.|.++.... ..+..-..+|++.|+++|+.|.+=.
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GG 51 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGG 51 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 47899998655 1234567888889999999765543
No 60
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=65.64 E-value=8.4 Score=28.62 Aligned_cols=40 Identities=8% Similarity=0.102 Sum_probs=31.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTP 76 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~ 76 (172)
..+|++.-..+.+-+. ...|.++|.++| +|.++.++....
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~ 58 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLH 58 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHH
Confidence 4578877777777665 899999999999 999999986543
No 61
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=65.55 E-value=5.2 Score=27.38 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=26.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..|++++. .|++- ..+++.|.++|++|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45788884 46654 78899999999999999875
No 62
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=63.43 E-value=5.5 Score=30.92 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=27.7
Q ss_pred CCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 28 ~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.|......++|.|+.....| ..+|+.|+++||+|+++...
T Consensus 2 ~m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 2 SLSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CCCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45544445789998543333 36788999999999988543
No 63
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=63.28 E-value=14 Score=26.88 Aligned_cols=40 Identities=5% Similarity=0.037 Sum_probs=31.6
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTP 76 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~ 76 (172)
.||++.-..+.|-+ =...|.++|.++|++|.++.++....
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 41 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKV 41 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHH
Confidence 46777766666755 67999999999999999999885433
No 64
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=62.84 E-value=14 Score=27.22 Aligned_cols=49 Identities=10% Similarity=0.020 Sum_probs=26.2
Q ss_pred hhhhhhcCCCCCCCcceEEEEcCCCc---cchHHHHHHHHHHHHCCCEEEEEe
Q 039991 21 LYLIRKLNMGSEIPQLHVFFFPFMAH---GHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 21 ~~~~~~~~M~~~~~~~~Ilv~p~p~~---GH~~P~l~La~~La~rGh~Vt~it 70 (172)
+|.|-.+.+.. ..++.|.++..... -+..-..+|++.|+++|+.|..=.
T Consensus 9 ~~~~g~~~~~~-~~~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GG 60 (199)
T 3qua_A 9 RVYVGDVKEGQ-DRQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGG 60 (199)
T ss_dssp -------------CCCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEeccccccc-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 56666666654 23478999975541 234667889999999999875443
No 65
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=62.78 E-value=13 Score=27.34 Aligned_cols=41 Identities=10% Similarity=0.004 Sum_probs=30.5
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHC-CCEEEEEeCCCChhhh
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTR-GVKASVITTPANTPYV 78 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~~~~~ 78 (172)
+|++.-..+.|-+ -...|.+.|.++ |++|.++.++.....+
T Consensus 2 ~IllgvTGsiaa~-k~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 2 KLIVGMTGATGAP-LGVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp EEEEEECSSSCHH-HHHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred EEEEEEeChHHHH-HHHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 5665555555554 599999999999 9999999988544333
No 66
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=61.61 E-value=12 Score=23.96 Aligned_cols=27 Identities=26% Similarity=0.453 Sum_probs=19.0
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..++. |..+.+++
T Consensus 40 ~~l~~~~~dlvllD~~~p~~~g~~~~~~l 68 (122)
T 3gl9_A 40 EKLSEFTPDLIVLXIMMPVMDGFTVLKKL 68 (122)
T ss_dssp HHHTTBCCSEEEECSCCSSSCHHHHHHHH
T ss_pred HHHHhcCCCEEEEeccCCCCcHHHHHHHH
Confidence 3445568999999987755 56666554
No 67
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=61.50 E-value=23 Score=23.85 Aligned_cols=40 Identities=10% Similarity=0.006 Sum_probs=29.2
Q ss_pred ceEEEEcCCC---ccchHHHHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMA---HGHMIPIVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~---~GH~~P~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
.+++++-..+ .......+.+|...++.||+|+++-+..-.
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 4555443333 466778899999999999999998877543
No 68
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=61.31 E-value=14 Score=28.24 Aligned_cols=42 Identities=12% Similarity=0.117 Sum_probs=27.2
Q ss_pred cCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 27 LNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 27 ~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|....+.++|++.. +.|.+ -.+|++.|+++||+|+.+.-.
T Consensus 3 ~~~~~~~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 3 IDNAVLPEGSLVLVTG--ANGFV--ASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp STTCSSCTTCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcccCCCCCEEEEEC--CccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3444323345777775 33443 356889999999999987643
No 69
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=60.99 E-value=6.2 Score=32.32 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=25.9
Q ss_pred hcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 26 KLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 26 ~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|+|+......+|+|+... . .-+..|..|+++|++|+++=..
T Consensus 2 ~~~~~~~~~~~dvvVIGaG---~--~GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 2 HMDQETIDTDYDVIVLGTG---I--TECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp -----CCCCBCSEEEECCS---H--HHHHHHHHHHHTTCCEEEECSS
T ss_pred CCchhhccccCCEEEECcC---H--HHHHHHHHHHHCCCeEEEEeCC
Confidence 4566654445678888533 2 2456778899999999998654
No 70
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=59.26 E-value=12 Score=29.56 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=24.6
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+|... .|-+ -..|+++|+++||+|+.+.-.
T Consensus 29 ~~~vlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGA--GGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECC--ccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 467877753 3433 356789999999999998754
No 71
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=59.02 E-value=19 Score=31.02 Aligned_cols=45 Identities=4% Similarity=-0.095 Sum_probs=39.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVS 79 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~ 79 (172)
+.+|++.+.++-.|-....-++..|..+|++|..+......+.+.
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv 142 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKIL 142 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 578999999999999999999999999999999998876555443
No 72
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=58.99 E-value=13 Score=25.33 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=28.9
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.+++++. |-.=+.|++.+++.|.++|.+|+++ ....
T Consensus 19 ~~~llIa--GG~GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEE--ETTHHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEE--CcCcHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4666665 5566899999999999999999999 5543
No 73
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=57.54 E-value=13 Score=27.55 Aligned_cols=39 Identities=5% Similarity=-0.016 Sum_probs=27.8
Q ss_pred ceEEEEcCCCccchHH-HHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMAHGHMIP-IVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P-~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
.+|++.-..+ +...- ...|.+.|.++|++|.++.++...
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4666554444 45554 789999999999999999998654
No 74
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=57.51 E-value=9.4 Score=27.63 Aligned_cols=40 Identities=5% Similarity=0.100 Sum_probs=29.7
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhh
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPY 77 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~ 77 (172)
||++.-..+.|=+ -...|.++|.++|++|.++.++.....
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~f 43 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNF 43 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGT
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 5555554444444 788999999999999999999865433
No 75
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=56.88 E-value=12 Score=25.34 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=20.1
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
++++.+||+||.|..++. |..+++++
T Consensus 52 ~~~~~~~DlillD~~MP~mdG~el~~~i 79 (134)
T 3to5_A 52 MLKKGDFDFVVTDWNMPGMQGIDLLKNI 79 (134)
T ss_dssp HHHHHCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHHhCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 445568999999998876 67777665
No 76
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=56.63 E-value=13 Score=29.34 Aligned_cols=37 Identities=8% Similarity=-0.014 Sum_probs=26.7
Q ss_pred ceEEEEc--CCCc-cchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFP--FMAH-GHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p--~p~~-GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++. +|.. |--.-...|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 3566553 2333 5556788999999999 9999998653
No 77
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=56.00 E-value=17 Score=28.30 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=26.3
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..++|.|+.....| ..+|+.|+++||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 35689999665555 56888899999999988654
No 78
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=55.96 E-value=20 Score=23.32 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=24.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|+++. .|.+- ..+++.|.++|++|+++...
T Consensus 4 ~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 35788884 46654 35788999999999998754
No 79
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=55.89 E-value=11 Score=29.13 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=34.5
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHC--CCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTR--GVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~ 75 (172)
++|+++...+.|.+.-..++.+.|.++ |.+|++++.+...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~ 42 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCR 42 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGH
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchh
Confidence 478999888789999999999999886 9999999987543
No 80
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=55.81 E-value=8.2 Score=29.74 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=24.7
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+++|.|+.....| ..+|+.|+++||+|+++...
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 35789998544334 36788999999999998644
No 81
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=54.47 E-value=10 Score=31.52 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=24.3
Q ss_pred HHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 138 PLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 138 ~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.+++++++.++|++|.... +..+|+++|||++
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~ 397 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLL 397 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEE
Confidence 3455566668999998754 5689999999964
No 82
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=54.45 E-value=16 Score=26.13 Aligned_cols=32 Identities=13% Similarity=0.110 Sum_probs=22.8
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|++.. +.|.+ -..|+++|+++|++|+.+.-.
T Consensus 2 kilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLG--ATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEc--CCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 456654 33443 367899999999999998754
No 83
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=54.22 E-value=11 Score=28.41 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=18.8
Q ss_pred HHHHHHHHHHCCCEEEEEeCCC
Q 039991 52 IVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~~ 73 (172)
-..+|++|+.+|++|++++.+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 3568999999999999998753
No 84
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=54.10 E-value=42 Score=21.92 Aligned_cols=43 Identities=7% Similarity=-0.041 Sum_probs=32.2
Q ss_pred CCCCCcceEEEEcCCCccchH-HHHHHHHHHHHCCCEEEEEeCC
Q 039991 30 GSEIPQLHVFFFPFMAHGHMI-PIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 30 ~~~~~~~~Ilv~p~p~~GH~~-P~l~La~~La~rGh~Vt~it~~ 72 (172)
+...++.+|++++..|.|+-. -...|-+.+.++|.++.+-...
T Consensus 16 ~~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~ 59 (113)
T 1tvm_A 16 YFQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCR 59 (113)
T ss_dssp CCSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence 333446789999999999987 4677778888899987655533
No 85
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=53.86 E-value=8.4 Score=27.31 Aligned_cols=19 Identities=11% Similarity=0.268 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCEEEEEeC
Q 039991 53 VDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 53 l~La~~La~rGh~Vt~it~ 71 (172)
+.+|..|+++|++|+++=-
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 6788899999999999853
No 86
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.81 E-value=16 Score=24.23 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=25.6
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.||+++.. |.+ -..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 457888853 553 467899999999999998764
No 87
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=53.77 E-value=14 Score=30.81 Aligned_cols=32 Identities=25% Similarity=0.180 Sum_probs=24.9
Q ss_pred HHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 138 PLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 138 ~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
.+++++++.+||++|... .+..+|+++|||++
T Consensus 392 el~~~i~~~~pDL~ig~~---~~~~~a~k~gIP~~ 423 (483)
T 3pdi_A 392 VLLKTVDEYQADILIAGG---RNMYTALKGRVPFL 423 (483)
T ss_dssp HHHHHHHHTTCSEEECCG---GGHHHHHHTTCCBC
T ss_pred HHHHHHHhcCCCEEEECC---chhHHHHHcCCCEE
Confidence 455667777999999754 46689999999975
No 88
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=53.11 E-value=29 Score=26.78 Aligned_cols=36 Identities=6% Similarity=-0.018 Sum_probs=25.2
Q ss_pred ceEEEEcCCCccchHHH--HHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPI--VDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~--l~La~~La~rGh~Vt~it~ 71 (172)
..++|+..|-.+.++-. -...+.|.+.||+|+++--
T Consensus 24 KiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 24 KVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp EEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 34457777877666543 3467778889999999853
No 89
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=52.94 E-value=12 Score=28.13 Aligned_cols=48 Identities=8% Similarity=0.101 Sum_probs=27.3
Q ss_pred CchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 17 SSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 17 ~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
...++|++.-+++. .++++++..+ |- --.+++++|+++|++|.++.-.
T Consensus 14 ~~~~~~~~~m~~~~-----~k~vlVTGas-~g--IG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 14 GTENLYFQSMMRNQ-----QKVVVITGAS-QG--IGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp ------CHHHHHTT-----CCEEEESSCS-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred hhhhhhhhhhhCcC-----CCEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 45677887766544 2344454332 32 2358999999999999987643
No 90
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=52.80 E-value=11 Score=29.43 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=21.4
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEE
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVI 69 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~i 69 (172)
+||+|+...-.| +.+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 577777533223 66777899999999998
No 91
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=51.78 E-value=26 Score=28.98 Aligned_cols=41 Identities=17% Similarity=0.337 Sum_probs=36.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
+..|+++..+|.|--.-...||..|+.+|++|.++..+.+.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 35677888899999999999999999999999999987653
No 92
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=51.49 E-value=33 Score=23.06 Aligned_cols=59 Identities=10% Similarity=0.230 Sum_probs=34.4
Q ss_pred eeeeeecCchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
++.|+.+.+.-..+.+.++-+ +..|.+..+-. .. ..+...-.+.++||.+|.+++....
T Consensus 6 ~~~f~p~~~~~~~~~~~i~~A----~~~I~i~~~~~-~~-~~i~~aL~~a~~rGV~Vril~~~~~ 64 (155)
T 1byr_A 6 QVGYSPEGSARVLVLSAIDSA----KTSIRMMAYSF-TA-PDIMKALVAAKKRGVDVKIVIDERG 64 (155)
T ss_dssp EEEEETTTHHHHHHHHHHHHC----SSEEEEEESSB-CC-HHHHHHHHHHHHTTCEEEEEEESTT
T ss_pred EEEECCCCcHHHHHHHHHHHH----hhEEEEEEEEe-CC-HHHHHHHHHHHHCCCEEEEEEeCcc
Confidence 567777666555666666633 23444433222 22 3344444445679999999997754
No 93
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=51.44 E-value=59 Score=24.32 Aligned_cols=53 Identities=11% Similarity=-0.033 Sum_probs=23.8
Q ss_pred eecCchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 14 TNNSSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 14 ~~~~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+..++.+.||++--++-. -..++++++..+.| --.++|++|+++|++|.++.-
T Consensus 11 ~~~~~~~~~~~~m~~~~~--l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 11 VDLGTENLYFQSMTGPFS--LAGRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp --------------CTTC--CTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccccccccchhhcccccC--CCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 344566677775322211 12344555533332 346899999999999988873
No 94
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=51.21 E-value=18 Score=28.22 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=27.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.||.|+...+.| |-.+|+.|.++|++|+..=...
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCCC
Confidence 4578888776666 5579999999999999987654
No 95
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=51.10 E-value=14 Score=28.47 Aligned_cols=41 Identities=10% Similarity=0.123 Sum_probs=35.8
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHC--CCEEEEEeCCCChh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTR--GVKASVITTPANTP 76 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~ 76 (172)
++|+++-..+.|.+.-..++.+.|.++ +.+|++++.+...+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~ 43 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQ 43 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhH
Confidence 478999988889999999999999987 99999999886543
No 96
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=51.01 E-value=24 Score=26.51 Aligned_cols=51 Identities=16% Similarity=0.092 Sum_probs=27.8
Q ss_pred CchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 17 SSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 17 ~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++-|+|++.-|..-. -..++++++..+.| --.+++++|+++|++|.++...
T Consensus 14 ~~~~~~~~~mm~~~~--l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 14 GTENLYFQSMMTSIS--LAGKTAFVTGGSRG---IGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp ------CHHHHTTTC--CTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccchhhhccccC--CCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 567788887544221 12344555533332 3468999999999999887544
No 97
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=50.53 E-value=35 Score=25.31 Aligned_cols=36 Identities=11% Similarity=0.060 Sum_probs=25.8
Q ss_pred cceEEEEcCCCcc----chHHHHHHHHHHHHCCCEEEEEe
Q 039991 35 QLHVFFFPFMAHG----HMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 35 ~~~Ilv~p~p~~G----H~~P~l~La~~La~rGh~Vt~it 70 (172)
+..|.++.....+ +..-..+|++.|+++|+.|..=.
T Consensus 9 m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GG 48 (216)
T 1ydh_A 9 FRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGG 48 (216)
T ss_dssp CSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECC
Confidence 4579999755543 34677889999999998774433
No 98
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=50.49 E-value=20 Score=26.93 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=23.1
Q ss_pred cCchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 16 NSSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 16 ~~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+...++|++.-.+|. .++++++..+.| --.++|++|+++|++|.++.-
T Consensus 13 ~~~~~~~~~~m~~l~-----gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 60 (266)
T 3uxy_A 13 LGTENLYFQSMQGFE-----GKVALVTGAAGG---IGGAVVTALRAAGARVAVADR 60 (266)
T ss_dssp -------------CT-----TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECSS
T ss_pred CCCCCcchhhhhCCC-----CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 344555665544433 244555544332 346899999999999988653
No 99
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=50.28 E-value=15 Score=26.73 Aligned_cols=38 Identities=8% Similarity=0.002 Sum_probs=31.6
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+|+|-.-+|.|--.-...||..|+++|.+|.++-....
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 56776666668889999999999999999999987653
No 100
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=49.89 E-value=13 Score=28.01 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=24.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+|.. +.|.+ -..|++.|+++||+|+.+.-.
T Consensus 7 ~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITG--GAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 46777776 33443 346889999999999998754
No 101
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=49.79 E-value=37 Score=25.10 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=25.8
Q ss_pred cceEEEEcCCCcc----chHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHG----HMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~G----H~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+..|.|++....+ ...-..+|++.|+++|+.|..=..
T Consensus 13 m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 13 FRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp CSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 4579999655554 234567889999999988765433
No 102
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.63 E-value=13 Score=24.95 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=26.1
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.||+++.+ |.+ -..+++.|.++|++|+++....
T Consensus 7 ~~~viIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGY---GRV--GSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECc---CHH--HHHHHHHHHHCCCCEEEEECCH
Confidence 468888854 443 3468899999999999998763
No 103
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=47.98 E-value=19 Score=26.22 Aligned_cols=39 Identities=10% Similarity=-0.038 Sum_probs=29.5
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
.+|++.-..+.|=+ -...|.+.|.++|++|.++.++...
T Consensus 9 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 47 (194)
T 1p3y_1 9 KKLLIGICGSISSV-GISSYLLYFKSFFKEIRVVMTKTAE 47 (194)
T ss_dssp CEEEEEECSCGGGG-GTHHHHHHHTTTSSEEEEEECHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 46666655555444 5789999999999999999988543
No 104
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.59 E-value=24 Score=25.24 Aligned_cols=34 Identities=12% Similarity=0.216 Sum_probs=25.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|++.. +.|.+ -..|++.|+++|++|+.+.-.
T Consensus 4 m~~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIG--ASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEET--CCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEc--CCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 46777775 34444 357889999999999998754
No 105
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=46.22 E-value=17 Score=25.13 Aligned_cols=37 Identities=11% Similarity=0.125 Sum_probs=28.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
.+++++. +-.=+.|++.+++.|.++|.+|+++ .....
T Consensus 24 ~~~llIa--GG~GItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE--ETTHHHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE--ccCcHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 4566665 3344899999999999999999999 65443
No 106
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=45.61 E-value=20 Score=25.56 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=22.7
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|++.. +.|-+ -..++++|+++|++|+.+.-.
T Consensus 2 ~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVG--STGRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp EEEEES--TTSHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred eEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 566664 33333 257899999999999998754
No 107
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=45.59 E-value=33 Score=21.55 Aligned_cols=26 Identities=19% Similarity=0.563 Sum_probs=17.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+.+++.+||+||.|..++. +..+.++
T Consensus 40 ~~~~~~~~dlii~D~~~p~~~g~~~~~~ 67 (120)
T 3f6p_A 40 EMVEELQPDLILLDIMLPNKDGVEVCRE 67 (120)
T ss_dssp HHHHTTCCSEEEEETTSTTTHHHHHHHH
T ss_pred HHHhhCCCCEEEEeCCCCCCCHHHHHHH
Confidence 3445568999999987765 4455544
No 108
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=45.42 E-value=31 Score=24.47 Aligned_cols=36 Identities=8% Similarity=-0.020 Sum_probs=26.2
Q ss_pred eEEEEcCCCcc----chHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHG----HMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~G----H~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.|.++.....| +..-..+|++.|+++|+.|..=...
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~ 42 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQ 42 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSS
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh
Confidence 57788765554 5678889999999999766555444
No 109
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=45.39 E-value=12 Score=31.30 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=26.7
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.++||+|+....-| +.+|++|..+|++||++....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 46799999643223 467899999999999998764
No 110
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=44.70 E-value=36 Score=25.86 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=32.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+..|+|..-+|.|=-.-...||..|+++|.+|.++-...
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345667777777999999999999999999999997764
No 111
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=44.66 E-value=18 Score=29.80 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=23.6
Q ss_pred HHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 139 LEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 139 l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
+++++++.++|++|.+.. ...+|+++|||++
T Consensus 377 l~~~i~~~~pDl~ig~~~---~~~~a~k~gip~~ 407 (458)
T 1mio_B 377 VHQWIKNEGVDLLISNTY---GKFIAREENIPFV 407 (458)
T ss_dssp HHHHHHHSCCSEEEESGG---GHHHHHHHTCCEE
T ss_pred HHHHHHhcCCCEEEeCcc---hHHHHHHcCCCEE
Confidence 445566678999998853 5788999999963
No 112
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=44.65 E-value=24 Score=27.34 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=26.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.+|.|+.....|. ++|+.|+++||+|+++.-.
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 45788887776664 6799999999999998643
No 113
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=44.57 E-value=14 Score=29.16 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 51 PIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 51 P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
--..+|+.++.+|++||+++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 345789999999999999997643
No 114
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=44.45 E-value=23 Score=26.07 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=29.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHH-CCCEEEEEeCCCChh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVT-RGVKASVITTPANTP 76 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~-rGh~Vt~it~~~~~~ 76 (172)
..+|++.-..+.+ ..-...|.++|.+ +|++|.++.++....
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~ 60 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKH 60 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGG
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHH
Confidence 4567766655555 4456999999999 899999999986543
No 115
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=44.25 E-value=19 Score=27.80 Aligned_cols=34 Identities=6% Similarity=-0.021 Sum_probs=24.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+|... .|-+ -..|+++|+++|++|+.+.-.
T Consensus 27 ~~~vlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 27 PKVWLITGV--AGFI--GSNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEECC--CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 356777753 3433 356889999999999998754
No 116
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=43.75 E-value=13 Score=29.26 Aligned_cols=42 Identities=7% Similarity=0.048 Sum_probs=37.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC--CCEEEEEeCCCChh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR--GVKASVITTPANTP 76 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~ 76 (172)
..+|+++-..+.|.+.-..++.+.|.++ +.+|++++.+.+.+
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~ 51 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQ 51 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGG
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhH
Confidence 5789999999999999999999999987 99999999886543
No 117
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=43.74 E-value=29 Score=26.32 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=31.6
Q ss_pred cceEE-EE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVF-FF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Il-v~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.++++ |. +-+|.|--.-...||..|+++|.+|.++-....
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 34444 44 346779999999999999999999999987744
No 118
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=43.61 E-value=32 Score=25.96 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=22.9
Q ss_pred CchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 17 SSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 17 ~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+..|+|++.-++|. .++++++..+.| --.++|++|+++|++|.++.-.
T Consensus 14 ~~~~~~~~~m~~~~-----~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 14 GTENLYFQSMMNQP-----SPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp -------------C-----CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccchhhhhhhcCCC-----CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 44566776544443 234555433332 3468999999999999887643
No 119
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=43.52 E-value=33 Score=22.19 Aligned_cols=26 Identities=19% Similarity=0.451 Sum_probs=17.9
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+++.+||+||.|..++. +..+.+++
T Consensus 43 ~~~~~~~dlvl~D~~lp~~~g~~~~~~l 70 (136)
T 3t6k_A 43 QIYKNLPDALICDVLLPGIDGYTLCKRV 70 (136)
T ss_dssp HHHHSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 445568999999987754 55555543
No 120
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=43.14 E-value=31 Score=25.56 Aligned_cols=36 Identities=11% Similarity=-0.005 Sum_probs=28.3
Q ss_pred ceEEEEcCCCcc----chHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHG----HMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~G----H~~P~l~La~~La~rGh~Vt~it~ 71 (172)
..|+++.....| +..-..+|++.|+++|+.|..=..
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg 77 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGG 77 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSC
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCCh
Confidence 578899877665 567889999999999987776554
No 121
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=42.92 E-value=37 Score=21.77 Aligned_cols=27 Identities=7% Similarity=0.123 Sum_probs=18.0
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..+.. +..+.+.+
T Consensus 44 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 72 (140)
T 3grc_A 44 EQVARRPYAAMTVDLNLPDQDGVSLIRAL 72 (140)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHH
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 3445568999999987654 55555443
No 122
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=42.57 E-value=41 Score=29.54 Aligned_cols=41 Identities=2% Similarity=0.085 Sum_probs=31.6
Q ss_pred CcceEEEEcCCCc---cchHHHHH-HHHHHHH-CCCEEEEEeCCCC
Q 039991 34 PQLHVFFFPFMAH---GHMIPIVD-MAKLFVT-RGVKASVITTPAN 74 (172)
Q Consensus 34 ~~~~Ilv~p~p~~---GH~~P~l~-La~~La~-rGh~Vt~it~~~~ 74 (172)
+..+++..|..+. ||..|++. |.+.+.. -||+|+++.++..
T Consensus 381 ~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 381 KPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp SCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 3568889997777 88899988 6665554 3999999998753
No 123
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=42.40 E-value=30 Score=26.44 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=23.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++|+|.. +.|.+ -.+|+++|+++||+|+.+.-
T Consensus 21 ~~vlVTG--asG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITG--GAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CEEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 5677765 33443 35789999999999999875
No 124
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=42.31 E-value=50 Score=23.35 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=33.1
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+..+.+..++|.|--.-+..|++.|..+|.+|.++....
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 345778888888999999999999999999999888653
No 125
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=42.02 E-value=42 Score=25.25 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=22.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.++++++..+.| --.+++++|+++|++|.++.-
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 345555533332 346899999999999988874
No 126
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=41.96 E-value=39 Score=23.62 Aligned_cols=37 Identities=19% Similarity=0.410 Sum_probs=29.9
Q ss_pred EEEE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 38 VFFF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 38 Ilv~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
|++. +-+|.|--.-...||..|+++|.+|.++-....
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 4444 345668889999999999999999999987744
No 127
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=41.65 E-value=17 Score=30.40 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=23.0
Q ss_pred HHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 139 LEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 139 l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
+++++++.+||++|... ....+|+++|||++
T Consensus 409 l~~~i~~~~pDL~ig~~---~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 409 FEEFVKRIKPDLIGSGI---KEKFIFQKMGIPFR 439 (492)
T ss_dssp HHHHHHHHCCSEEEECH---HHHHHHHHTTCCEE
T ss_pred HHHHHHhcCCcEEEeCc---chhHHHHHcCCCEE
Confidence 34445556899999863 45789999999974
No 128
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=41.65 E-value=24 Score=27.20 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=24.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|.|+. -|.+ -..+|+.|+++||+|+++...
T Consensus 21 m~~I~iIG---~G~m--G~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLG---LGIM--GKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEEC---CSHH--HHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEC---ccHH--HHHHHHHHHHCCCeEEEEeCC
Confidence 46899885 4443 256788899999999998654
No 129
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=41.51 E-value=34 Score=21.57 Aligned_cols=26 Identities=12% Similarity=0.169 Sum_probs=17.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+.+++.+||+||.|..++. +..+.++
T Consensus 41 ~~l~~~~~dlii~D~~l~~~~g~~~~~~ 68 (127)
T 3i42_A 41 HAMSTRGYDAVFIDLNLPDTSGLALVKQ 68 (127)
T ss_dssp HHHHHSCCSEEEEESBCSSSBHHHHHHH
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHH
Confidence 3455568999999986643 5555544
No 130
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=41.50 E-value=36 Score=22.24 Aligned_cols=26 Identities=15% Similarity=0.378 Sum_probs=18.0
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+++.+||+||.|..++. |..+.+.+
T Consensus 53 ~~~~~~~dlvl~D~~mp~~~g~~~~~~l 80 (143)
T 3m6m_D 53 AMAEEDYDAVIVDLHMPGMNGLDMLKQL 80 (143)
T ss_dssp HHHHSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 445568999999987754 56665544
No 131
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=41.49 E-value=36 Score=27.59 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=25.4
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++.++++| |.||+. ..|++.+...|++||++-+..
T Consensus 203 P~~rL~If---GAGhva--~ala~~a~~lg~~V~v~D~R~ 237 (386)
T 2we8_A 203 PRPRMLVF---GAIDFA--AAVAQQGAFLGYRVTVCDARP 237 (386)
T ss_dssp CCCEEEEE---CCSTHH--HHHHHHHHHTTCEEEEEESCT
T ss_pred CCCEEEEE---CCCHHH--HHHHHHHHhCCCEEEEECCch
Confidence 45788888 789984 344555566699999998753
No 132
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=41.41 E-value=36 Score=25.14 Aligned_cols=37 Identities=11% Similarity=0.083 Sum_probs=30.3
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.|+|..-+|.|--.-...||..|+++|++|.++-...
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 4555556677999999999999999999999986654
No 133
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=41.35 E-value=25 Score=26.04 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=24.6
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|.|+. .|.+ -..||+.|+++||+|++....
T Consensus 19 ~~kIgiIG---~G~m--G~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLG---TGTV--GRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEEC---CSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEEC---CCHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 57889884 4443 245788899999999998654
No 134
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=41.10 E-value=41 Score=25.26 Aligned_cols=38 Identities=8% Similarity=0.096 Sum_probs=31.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..|+|..-+|.|--.-...||..|+++|++|.++=...
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 34556666677999999999999999999999987664
No 135
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=40.96 E-value=39 Score=25.39 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=23.1
Q ss_pred CchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 17 SSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 17 ~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..+++|++. |... ..++++++..+. - --.+++++|+++|++|.++.-.
T Consensus 14 ~~~~~~~~~---m~~~--~~k~~lVTGas~-G--IG~aia~~la~~G~~V~~~~r~ 61 (272)
T 4dyv_A 14 GTENLYFQS---MSKT--GKKIAIVTGAGS-G--VGRAVAVALAGAGYGVALAGRR 61 (272)
T ss_dssp -------------------CCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred Ccceeehhh---hcCC--CCCEEEEeCCCc-H--HHHHHHHHHHHCCCEEEEEECC
Confidence 346677755 3321 234566653333 2 3468999999999999887643
No 136
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=40.84 E-value=31 Score=26.29 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=22.2
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++|+|.. +.|-+ -.+|+++|+++||+|+.+.-
T Consensus 10 ~~vlVTG--atGfI--G~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVG--GTGFV--ASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEEC--TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CchHH--HHHHHHHHHHCCCEEEEEEc
Confidence 4666665 33433 24688999999999987653
No 137
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=40.26 E-value=50 Score=24.81 Aligned_cols=21 Identities=10% Similarity=0.105 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 31 G~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 31 GKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 138
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=40.24 E-value=32 Score=25.42 Aligned_cols=39 Identities=8% Similarity=0.130 Sum_probs=30.4
Q ss_pred ceEEEE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFFF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
..|++. +-+|.|--.-...||..|+++|.+|.++-....
T Consensus 7 ~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 7 RRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 344454 344558889999999999999999999987654
No 139
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=40.15 E-value=42 Score=26.37 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=35.4
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+...|+++..|+.|--.-+..|+..|+.+|++|.++....
T Consensus 78 ~~~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp 117 (355)
T 3p32_A 78 NAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDP 117 (355)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC-
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecCC
Confidence 3568899999999999999999999999999999988764
No 140
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=39.95 E-value=25 Score=26.28 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=17.7
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-..+|++|+++|++|+++..+
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999998653
No 141
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=39.74 E-value=95 Score=22.87 Aligned_cols=32 Identities=16% Similarity=-0.030 Sum_probs=21.8
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++++++..+.| --.++|++|+++|++|.++.-
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 45555544433 347888999999999888753
No 142
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=39.71 E-value=32 Score=26.13 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=25.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|.|+.....|. .+++.|+++||+|+++...
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 46888886555553 5788899999999988644
No 143
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=39.59 E-value=34 Score=25.95 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=22.6
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++|++.. +.|-+ -..|++.|+++||+|+.+.-
T Consensus 2 ~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 2 NSILICG--GAGYI--GSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC--CCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 3566664 33433 35788999999999999864
No 144
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=39.54 E-value=34 Score=25.81 Aligned_cols=35 Identities=9% Similarity=0.059 Sum_probs=23.5
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.++|++.. +.|-+ -..|+++|+++||+|+.+.-.
T Consensus 11 ~~~~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALITG--VAGFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 345666665 33443 356889999999999987643
No 145
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=39.50 E-value=24 Score=24.95 Aligned_cols=32 Identities=16% Similarity=0.137 Sum_probs=23.2
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|++.. +.|.+ -..|+++|+++|++|+.+.-.
T Consensus 2 kvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 566664 33443 257899999999999998754
No 146
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=39.24 E-value=25 Score=26.60 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=23.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+++.. |.+- ..+|+.|+++||+|+++...
T Consensus 3 ~m~i~iiG~---G~~G--~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGA---GAMG--SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECc---CHHH--HHHHHHHHhCCCcEEEEECC
Confidence 357888864 4332 45788899999999998653
No 147
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=39.18 E-value=43 Score=25.32 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=24.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+|+|+. +.|.+ -..++++|+++||+|+.++-..
T Consensus 12 ~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred CeEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 3677775 33444 3467899999999999987654
No 148
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=39.09 E-value=24 Score=25.52 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=24.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|++.. +.|.+ -.+|+++|+++||+|+.+.-.
T Consensus 21 ~~~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 35677775 33433 357889999999999998854
No 149
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.93 E-value=58 Score=22.15 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=28.7
Q ss_pred eEEEEcC-CCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 37 HVFFFPF-MAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 37 ~Ilv~p~-p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+++++-+ ...-...+.+-+|...++.|++|+++.+..-
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~g 47 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWG 47 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHH
Confidence 4443333 3347778999999999999999999998743
No 150
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=38.91 E-value=47 Score=20.99 Aligned_cols=24 Identities=21% Similarity=0.284 Sum_probs=16.1
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHH
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAA 165 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~ 165 (172)
.+++.+||+||.|..+.. +..+.+
T Consensus 42 ~l~~~~~dlvi~d~~l~~~~g~~~~~ 67 (133)
T 3nhm_A 42 QALAHPPDVLISDVNMDGMDGYALCG 67 (133)
T ss_dssp HHHHSCCSEEEECSSCSSSCHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCCCCHHHHHH
Confidence 445568999999987654 444444
No 151
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=38.90 E-value=39 Score=27.19 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=24.7
Q ss_pred CcceEEEEcCCCccchH-HHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFMAHGHMI-PIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~-P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++.+++++ |.||+. ++.++++.| |++||++-+..
T Consensus 198 p~~~L~I~---GaGhva~aLa~la~~l---gf~V~v~D~R~ 232 (362)
T 3on5_A 198 PKERLIIF---GAGPDVPPLVTFASNV---GFYTVVTDWRP 232 (362)
T ss_dssp CCEEEEEE---CCSTTHHHHHHHHHHH---TEEEEEEESCG
T ss_pred CCCEEEEE---CCCHHHHHHHHHHHHC---CCeEEEECCCc
Confidence 35688887 789983 555555444 99999998764
No 152
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.71 E-value=54 Score=24.46 Aligned_cols=33 Identities=15% Similarity=0.054 Sum_probs=23.4
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.++++++..+.| --.+++++|+++|++|.++..
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 455666544332 356899999999999988765
No 153
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=38.64 E-value=47 Score=25.40 Aligned_cols=45 Identities=20% Similarity=0.239 Sum_probs=27.6
Q ss_pred hhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 20 SLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 20 ~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
|+||+ .|.. .-..++++++-.+.| -=.++|++|++.|.+|.+..-
T Consensus 17 n~~~~---~Ms~-rL~gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 17 NLYFQ---SMTQ-RLNAKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp -----------C-TTTTCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccchh---hhcc-hhCCCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 45554 3543 124578888877664 457899999999999987764
No 154
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=38.45 E-value=65 Score=26.36 Aligned_cols=40 Identities=13% Similarity=0.195 Sum_probs=34.8
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHC-CCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTR-GVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~~ 75 (172)
..|+++..+|.|--.-...||..|+.+ |++|.++......
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 456677778889999999999999999 9999999988653
No 155
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=38.37 E-value=27 Score=27.17 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=25.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|.|+.....| ..+|+.|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3688988544434 46788999999999998754
No 156
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=38.36 E-value=57 Score=22.88 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=31.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
...|++...+|.|--.-.-.|++.|-..|+.|..+..
T Consensus 9 ~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~~ 45 (215)
T 1nn5_A 9 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 45 (215)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEeeC
Confidence 4678999999999999999999999999999866543
No 157
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=38.28 E-value=36 Score=25.83 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=25.1
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.++|++.. +.|-+ -..|++.|+++||+|+.+.-..
T Consensus 13 ~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~~ 48 (335)
T 1rpn_A 13 MTRSALVTG--ITGQD--GAYLAKLLLEKGYRVHGLVARR 48 (335)
T ss_dssp --CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECCC
T ss_pred cCCeEEEEC--CCChH--HHHHHHHHHHCCCeEEEEeCCC
Confidence 356788775 33443 3578899999999999987543
No 158
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=38.27 E-value=57 Score=23.50 Aligned_cols=34 Identities=9% Similarity=0.079 Sum_probs=24.6
Q ss_pred eEEEEcCCCcc----chHHHHHHHHHHHHCCCEEEEEe
Q 039991 37 HVFFFPFMAHG----HMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 37 ~Ilv~p~p~~G----H~~P~l~La~~La~rGh~Vt~it 70 (172)
.|.++.....| +..-..+|++.|+++|+.|..=.
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 57788766532 45678889999999998765443
No 159
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=37.93 E-value=57 Score=25.62 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=32.9
Q ss_pred cceEEEE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+.+|+++ .-+|.|--.-...||..|+++|.+|-++..+..
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4555555 445669999999999999999999999999863
No 160
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=37.80 E-value=52 Score=21.17 Aligned_cols=38 Identities=5% Similarity=0.148 Sum_probs=29.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|++++..|.|+-.-.-.+-+.+.++|.++.+-+..
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~ 41 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIA 41 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 46799999999988866666777777889987665544
No 161
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=37.77 E-value=53 Score=26.32 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=24.2
Q ss_pred ecCchhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 15 NNSSLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 15 ~~~~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
..||-|+||--+| |. ..+|+++. .| ..-..+++.+.+.|++|.++.
T Consensus 9 ~~~~~~~~~~~~m-m~----~~~I~ilG---gG--~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 9 HHSSENLYFQGHM-WN----SRKVGVLG---GG--QLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ------------C-CS----CCEEEEEC---CS--HHHHHHHHHHHHHTCEEEEEE
T ss_pred cccccceeEeccC-CC----CCEEEEEC---CC--HHHHHHHHHHHHCCCEEEEEE
Confidence 3578899998887 33 36788885 34 245667777888899999988
No 162
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=37.58 E-value=30 Score=26.24 Aligned_cols=35 Identities=9% Similarity=0.095 Sum_probs=24.6
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+++|+++. +.|.+ -..++++|+++||+|+.++-..
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYG--GTGYI--GKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEc--CCchh--HHHHHHHHHhCCCcEEEEECCc
Confidence 34677775 33444 2367889999999999988653
No 163
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=37.46 E-value=31 Score=26.51 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=24.9
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++...+.|-. +|..|++.||+|+++.-..
T Consensus 3 mkI~IiGaGaiG~~-----~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLY-----YGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHH-----HHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHH-----HHHHHHHCCCeEEEEEcCc
Confidence 47888866666643 6788999999999998653
No 164
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=37.46 E-value=44 Score=22.08 Aligned_cols=27 Identities=19% Similarity=0.417 Sum_probs=17.5
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..++. +..+.+.+
T Consensus 45 ~~l~~~~~dlii~D~~l~~~~g~~~~~~l 73 (154)
T 3gt7_A 45 RFLSLTRPDLIISDVLMPEMDGYALCRWL 73 (154)
T ss_dssp HHHTTCCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 3445568999999987654 55555443
No 165
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=37.41 E-value=52 Score=23.40 Aligned_cols=33 Identities=9% Similarity=0.095 Sum_probs=27.0
Q ss_pred EEEEcC-CCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 38 VFFFPF-MAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 38 Ilv~p~-p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
|++... +|.|--.-...||..|+++|++|.++=
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 444443 577999999999999999999999863
No 166
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=37.37 E-value=52 Score=21.20 Aligned_cols=27 Identities=19% Similarity=0.256 Sum_probs=17.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..+.. +..+.+.+
T Consensus 45 ~~l~~~~~dlii~D~~l~~~~g~~~~~~l 73 (144)
T 3kht_A 45 YQVQQAKYDLIILDIGLPIANGFEVMSAV 73 (144)
T ss_dssp HHHTTCCCSEEEECTTCGGGCHHHHHHHH
T ss_pred HHhhcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 3445568999999987654 44554443
No 167
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=37.23 E-value=36 Score=27.98 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=26.7
Q ss_pred ceEEEEcCCC---ccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMA---HGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~---~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.-..+=|... -||+.|++.+ ++|+..||++.++...
T Consensus 33 iy~G~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd 71 (419)
T 2ts1_A 33 LYCGFDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGG 71 (419)
T ss_dssp EEEEECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred EEEeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3455777754 2999986655 5899999999998754
No 168
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=37.05 E-value=29 Score=28.21 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=25.9
Q ss_pred eEEEEcCCC---ccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMA---HGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~---~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
-..+=|..- -||+.|++.+. .|+..||++.++...
T Consensus 68 y~G~dPTg~sLHlGhlv~l~~l~-~lQ~~G~~~~~lIgD 105 (392)
T 1y42_X 68 YVGIDPTAPSLHVGHLLPLMPLF-WMYLEGYKAFTLIGG 105 (392)
T ss_dssp EEEECCCSSSCBGGGHHHHHHHH-HHHHHTCEEEEEECT
T ss_pred EEeecCCCCCccHHHHHHHHHHH-HHHHcCCcEEEEEcC
Confidence 344667654 29999876654 888889999998754
No 169
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=36.96 E-value=27 Score=26.03 Aligned_cols=31 Identities=6% Similarity=-0.021 Sum_probs=22.6
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|+++.. |.+- ..+|+.|+++||+|+++...
T Consensus 2 ~i~iiG~---G~~G--~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGC---GALG--QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECC---SHHH--HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECc---CHHH--HHHHHHHHhCCCCEEEEEcC
Confidence 5677754 4433 36788999999999998654
No 170
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=36.80 E-value=57 Score=20.92 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=17.3
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+++.+||+||.|..++. +..+.+.+
T Consensus 49 ~l~~~~~dlvllD~~lp~~~g~~~~~~l 76 (140)
T 3c97_A 49 AYQNRQFDVIIMDIQMPVMDGLEAVSEI 76 (140)
T ss_dssp HHHHSCCSEEEECTTCCSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 334568999999987653 55555443
No 171
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=36.76 E-value=60 Score=20.58 Aligned_cols=29 Identities=3% Similarity=0.033 Sum_probs=23.2
Q ss_pred ccchHHHHHHHHHHHHC-CC-EEEEEeCCCC
Q 039991 46 HGHMIPIVDMAKLFVTR-GV-KASVITTPAN 74 (172)
Q Consensus 46 ~GH~~P~l~La~~La~r-Gh-~Vt~it~~~~ 74 (172)
.......+.+|..+++. || +|+++-..+-
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 35567789999999998 99 9998887643
No 172
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=36.61 E-value=53 Score=24.10 Aligned_cols=34 Identities=6% Similarity=0.027 Sum_probs=22.9
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+.+++...+ |- --.+++++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas-~g--IG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALITAGT-KG--LGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCEEEEeCCC-ch--hHHHHHHHHHHCCCEEEEEcCC
Confidence 3445555333 32 2468999999999999987544
No 173
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=36.58 E-value=35 Score=26.01 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=24.0
Q ss_pred HHHhhhCCCCEEEecCCCc------cHHHHHHHhCCCCC
Q 039991 140 EQLLRDHKPDCLVADIFFP------WATDAAAKFGIPRL 172 (172)
Q Consensus 140 ~~ll~~~~~d~VI~D~~~~------~a~~vA~~lgiP~v 172 (172)
.+++++.+||+|+.-.-.. -+..+|+.||+|.+
T Consensus 105 a~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~v 143 (264)
T 1o97_C 105 TEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHA 143 (264)
T ss_dssp HHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEE
T ss_pred HHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcc
Confidence 3444445799999886553 36799999999864
No 174
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=36.36 E-value=46 Score=25.31 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=24.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|++.. +.|-+ -.+|+++|+++||+|+.+.-.
T Consensus 5 ~~~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTG--GAGYI--GSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECCC
T ss_pred CcEEEEec--CCcHH--HHHHHHHHHHCCCcEEEEecC
Confidence 35677665 33433 257899999999999988643
No 175
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=36.28 E-value=57 Score=23.73 Aligned_cols=21 Identities=5% Similarity=0.074 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 26 G~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 26 GLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999888643
No 176
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=36.16 E-value=66 Score=23.83 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=22.8
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.+++...+.| --.+++++|+++|++|.++.-.
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34555533332 3468999999999999887753
No 177
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=36.13 E-value=49 Score=21.72 Aligned_cols=26 Identities=23% Similarity=0.370 Sum_probs=17.3
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+.+++.+||+||.|..+.. +..+.++
T Consensus 52 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~ 79 (153)
T 3hv2_A 52 QLLASREVDLVISAAHLPQMDGPTLLAR 79 (153)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHH
T ss_pred HHHHcCCCCEEEEeCCCCcCcHHHHHHH
Confidence 3445568999999987654 4555444
No 178
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=36.09 E-value=54 Score=24.31 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=24.1
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|++.. + |- --..|++.|+++||+|+.+.-.
T Consensus 4 ~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5677775 3 53 3457899999999999999754
No 179
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=36.04 E-value=12 Score=31.00 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=25.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+||+++...-.| ..||+.|.+.||+||++-..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5788888543333 46899999999999999765
No 180
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=36.03 E-value=34 Score=25.62 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=23.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|+++.. .|.+ -..+++.|+++||+|+.++-.
T Consensus 5 ~~ilVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLIGA--TGYI--GRHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEEST--TSTT--HHHHHHHHHHTTCCEEEECCC
T ss_pred CEEEEEcC--CcHH--HHHHHHHHHhCCCCEEEEECC
Confidence 46777763 3433 246788999999999987754
No 181
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=35.87 E-value=65 Score=23.72 Aligned_cols=33 Identities=9% Similarity=0.013 Sum_probs=22.1
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.+++...+ |- --.+++++|+++|++|.++.-.
T Consensus 30 k~vlITGas-~g--IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGAS-RG--IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-Ch--HHHHHHHHHHHCCCEEEEEECC
Confidence 345554333 32 3478899999999998877643
No 182
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.79 E-value=25 Score=27.18 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=24.8
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++...+.|- .+|..|++.||+|+++.-..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 5788885544443 46788999999999998654
No 183
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=35.79 E-value=31 Score=27.19 Aligned_cols=25 Identities=12% Similarity=0.244 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 49 MIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 49 ~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+-+|.+|.+.|.++|++|.++|...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4589999999999999999999763
No 184
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=35.64 E-value=21 Score=27.04 Aligned_cols=32 Identities=9% Similarity=-0.043 Sum_probs=24.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+.+|+++..... -+..|..|+++|++|+++-.
T Consensus 22 ~~~vvIIG~G~a-----Gl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPA-----AHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEec
Confidence 568888853322 25678889999999999976
No 185
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=35.61 E-value=37 Score=25.77 Aligned_cols=32 Identities=16% Similarity=0.026 Sum_probs=23.3
Q ss_pred HHhhhCCCCEEEecCCCc------cHHHHHHHhCCCCC
Q 039991 141 QLLRDHKPDCLVADIFFP------WATDAAAKFGIPRL 172 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~------~a~~vA~~lgiP~v 172 (172)
+++++.+||+|+.-.-.. -+..+|+.||+|.+
T Consensus 110 ~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~v 147 (255)
T 1efv_B 110 KLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQG 147 (255)
T ss_dssp HHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEE
T ss_pred HHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcc
Confidence 344445799999886553 26799999999863
No 186
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=35.60 E-value=18 Score=29.47 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=22.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|+|+ |-||- =|.=|..|+++|++|+++=..
T Consensus 2 k~VvVI---GaG~~--GL~aA~~La~~G~~V~VlEa~ 33 (501)
T 4dgk_A 2 KPTTVI---GAGFG--GLALAIRLQAAGIPVLLLEQR 33 (501)
T ss_dssp CCEEEE---CCHHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEE---CCcHH--HHHHHHHHHHCCCcEEEEccC
Confidence 467777 34443 245567899999999998543
No 187
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=35.32 E-value=43 Score=27.70 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=25.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+|.... |-+- ..|++.|+++||+|+.++-.
T Consensus 147 ~m~VLVTGat--G~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSR--GLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTT--SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC--CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 5688888643 4332 46889999999999998754
No 188
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=35.31 E-value=51 Score=20.76 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=17.0
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+++.+||+||.|..+.. +..+.+.+
T Consensus 45 ~l~~~~~dlii~d~~l~~~~g~~~~~~l 72 (132)
T 3lte_A 45 KLSTFEPAIMTLDLSMPKLDGLDVIRSL 72 (132)
T ss_dssp HHHHTCCSEEEEESCBTTBCHHHHHHHH
T ss_pred HHHhcCCCEEEEecCCCCCCHHHHHHHH
Confidence 445568999999987654 45555443
No 189
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=35.23 E-value=43 Score=25.45 Aligned_cols=32 Identities=13% Similarity=0.288 Sum_probs=22.2
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++|+|.. +.|-+ -..|+++|+++|++|+.+.-
T Consensus 2 ~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITG--GCGFL--GSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEeC--CCchh--HHHHHHHHHhCCCEEEEEeC
Confidence 3566664 33433 35788999999999999864
No 190
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=34.97 E-value=51 Score=24.69 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=24.1
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+++. +.|.+ -..++++|+++|++|+.++-.
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 34677775 33444 246788999999999988755
No 191
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=34.85 E-value=49 Score=27.92 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=31.7
Q ss_pred ceEE-EEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVF-FFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Il-v~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+|+ +-.-+|.|--.-...||..|+++|.+|-++....
T Consensus 8 ~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4444 4455667999999999999999999999999886
No 192
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=34.77 E-value=71 Score=19.94 Aligned_cols=27 Identities=7% Similarity=0.206 Sum_probs=18.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.++..+||+||.|..++. +..+.+.+
T Consensus 45 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l 73 (129)
T 1p6q_A 45 KIMAQNPHHLVISDFNMPKMDGLGLLQAV 73 (129)
T ss_dssp HHHHTSCCSEEEECSSSCSSCHHHHHHHH
T ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 3445568999999987653 56666554
No 193
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=34.63 E-value=47 Score=25.16 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=18.5
Q ss_pred CCCEEEecCCCcc-------HHHHHHHhCCCCC
Q 039991 147 KPDCLVADIFFPW-------ATDAAAKFGIPRL 172 (172)
Q Consensus 147 ~~d~VI~D~~~~~-------a~~vA~~lgiP~v 172 (172)
+||++++|-.... |..++-.+|+|+|
T Consensus 107 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtI 139 (237)
T 3goc_A 107 PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTI 139 (237)
T ss_dssp CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEE
T ss_pred CCCEEEEeCceeecCCCcchhheeeeecCCCEE
Confidence 7999999975433 3466667778864
No 194
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=34.54 E-value=32 Score=26.58 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=23.1
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEE
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVI 69 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~i 69 (172)
.++|+++...+.| ..+|..|++.||+|+++
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 5789999655445 44788899999999999
No 195
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=34.44 E-value=32 Score=23.84 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=23.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|++.. +.|-+ -..++++|+++|++|+.+.-.
T Consensus 4 ~~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 4677664 33433 467889999999999998754
No 196
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=34.34 E-value=58 Score=21.23 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=18.6
Q ss_pred HHHHhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 139 LEQLLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 139 l~~ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
..+.+++.+||+||.|..+.. +..+.+.
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~ 87 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEW 87 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHH
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHH
Confidence 334556678999999987644 5555544
No 197
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=34.28 E-value=58 Score=25.20 Aligned_cols=38 Identities=21% Similarity=0.142 Sum_probs=31.7
Q ss_pred ceEEEE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+|+++ .-+|.|--.-...||..|+++|.+|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 455544 45666999999999999999999999999986
No 198
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=34.25 E-value=61 Score=27.20 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=35.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
...|+++..++.|--.-...|+..|+.+|.+|.++..+.+
T Consensus 101 ~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~ 140 (504)
T 2j37_W 101 QNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTF 140 (504)
T ss_dssp -EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEecccc
Confidence 3468899999999999999999999999999999988654
No 199
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A*
Probab=34.17 E-value=72 Score=25.44 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=29.8
Q ss_pred hhhhhcCCCCCCCcce--EEEEcCCC-c--cchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 22 YLIRKLNMGSEIPQLH--VFFFPFMA-H--GHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 22 ~~~~~~~M~~~~~~~~--Ilv~p~p~-~--GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
-++..|+-+..+++.+ ..+=|..- . ||+.|+.. .+.|+..||++.++...
T Consensus 33 ~L~~~L~~~~~g~~~~vy~G~~PTg~sLHLGhl~~l~~-~~~lQ~~G~~~~~lIaD 87 (356)
T 2pid_A 33 ELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLG-LFHLQRAGHNVIALVGG 87 (356)
T ss_dssp CGGGGC-------CCEEEEEECCSSSSCBHHHHHHHHH-HHHHHHTTCEEEEEECT
T ss_pred HHHHHHhcCccCCCCEEEEeecCCCCcccHHHHHHHHH-HHHHHHCCCcEEEEEcc
Confidence 3556665332122234 34677753 3 99888776 56788999999998754
No 200
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=34.03 E-value=65 Score=23.39 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=27.4
Q ss_pred cCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 42 PFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 42 p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+-+|.|--.-...||..|+++|.+|.++-...
T Consensus 10 ~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 10 GKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp SSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 33455889999999999999999999998775
No 201
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=34.02 E-value=48 Score=25.35 Aligned_cols=34 Identities=9% Similarity=0.143 Sum_probs=24.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+|... .|-+ -..|+++|+++|++|+.+.-.
T Consensus 27 ~~~vlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 27 RKRILITGG--AGFV--GSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEcC--ccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 457777753 3433 357889999999999998753
No 202
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=33.99 E-value=47 Score=21.15 Aligned_cols=25 Identities=28% Similarity=0.521 Sum_probs=16.2
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+++.+||+||.|..... +..+.+.
T Consensus 46 ~l~~~~~dlvi~d~~l~~~~g~~~~~~ 72 (137)
T 3hdg_A 46 LFGLHAPDVIITDIRMPKLGGLEMLDR 72 (137)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHH
T ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHH
Confidence 344458999999987654 4555443
No 203
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=33.98 E-value=34 Score=28.07 Aligned_cols=36 Identities=25% Similarity=0.434 Sum_probs=26.7
Q ss_pred ceEEEEcCCC--c-cchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMA--H-GHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~--~-GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.-..+=|... . ||+.|++.+ ++|+..||++.++...
T Consensus 35 iy~G~dPTg~sLHlGh~v~l~~~-~~lQ~~G~~~~~lIgd 73 (420)
T 1jil_A 35 LYCGADPTADSLHIGHLLPFLTL-RRFQEHGHRPIVLIGG 73 (420)
T ss_dssp EEEEECCSSSSCBHHHHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred EEEeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3455777755 2 999986655 5899999999998754
No 204
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.94 E-value=61 Score=23.84 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 20 GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999998887653
No 205
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=33.79 E-value=65 Score=19.92 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=16.6
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+...+||+||.|..++. +..+.+.+
T Consensus 42 ~~~~~~~dlvi~D~~l~~~~g~~~~~~l 69 (123)
T 1xhf_A 42 ILSEYDINLVIMDINLPGKNGLLLAREL 69 (123)
T ss_dssp HHHHSCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 344557999999987653 55555443
No 206
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=33.79 E-value=36 Score=25.78 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=22.7
Q ss_pred HhhhCCCCEEEecCCCc------cHHHHHHHhCCCCC
Q 039991 142 LLRDHKPDCLVADIFFP------WATDAAAKFGIPRL 172 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~------~a~~vA~~lgiP~v 172 (172)
++++.+||+|+.-.-.. -+..+|+.||+|.+
T Consensus 108 ~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~v 144 (252)
T 1efp_B 108 VARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQA 144 (252)
T ss_dssp HHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEE
T ss_pred HHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcc
Confidence 33444799999886553 36799999999863
No 207
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=33.74 E-value=65 Score=20.62 Aligned_cols=27 Identities=26% Similarity=0.361 Sum_probs=17.9
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..... +..+.+.+
T Consensus 49 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 49 KFLQHNKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHCCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 3444567999999976643 56666555
No 208
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=33.72 E-value=58 Score=20.88 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=17.2
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+++..+||+||.|..++. +..+.+.+
T Consensus 42 ~l~~~~~dlvi~D~~l~~~~g~~~~~~l 69 (138)
T 3c3m_A 42 ALNATPPDLVLLDIMMEPMDGWETLERI 69 (138)
T ss_dssp HHHHSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHH
Confidence 344567999999987653 55555544
No 209
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=33.63 E-value=44 Score=27.39 Aligned_cols=39 Identities=15% Similarity=0.322 Sum_probs=34.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
..|+++..+|.|--.-...||..|+.+|++|.++.....
T Consensus 100 ~vI~ivG~~GvGKTTla~~La~~l~~~G~kVllv~~D~~ 138 (432)
T 2v3c_C 100 NVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTY 138 (432)
T ss_dssp CCEEEECCSSSSTTHHHHHHHHHHHHHHCCEEEECCSCC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 468888889999999999999999999999999987754
No 210
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=33.57 E-value=74 Score=19.38 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=17.0
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.++..+||+||.|..++. +..+.+.+
T Consensus 40 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l 67 (116)
T 3a10_A 40 KFFSGNYDLVILDIEMPGISGLEVAGEI 67 (116)
T ss_dssp HHHHSCCSEEEECSCCSSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEECCCCCCCHHHHHHHH
Confidence 344568999999987653 55555443
No 211
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=33.46 E-value=63 Score=25.19 Aligned_cols=40 Identities=10% Similarity=0.124 Sum_probs=28.8
Q ss_pred cceEEEEcCCC---ccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFFPFMA---HGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p~---~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.++.+|++..- -|-=.-...|++.|.+||++||.+-.+++
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 34555555332 35557888999999999999999876654
No 212
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=33.36 E-value=67 Score=23.59 Aligned_cols=35 Identities=9% Similarity=0.148 Sum_probs=27.8
Q ss_pred ceEEEEcC-CCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 36 LHVFFFPF-MAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 36 ~~Ilv~p~-p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
..|.+... ++.|--.-.+.|++.|+++|.+|.+.=
T Consensus 5 k~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 5 KKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 34444443 566999999999999999999999975
No 213
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=33.34 E-value=60 Score=26.69 Aligned_cols=39 Identities=15% Similarity=0.065 Sum_probs=28.8
Q ss_pred CcceEEEEcCCCccc--hHHHHHHHHH--HHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGH--MIPIVDMAKL--FVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH--~~P~l~La~~--La~rGh~Vt~it~~ 72 (172)
++++|+++.....+| -.-+..|++. |.++||+|++++..
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 457899776554444 3557789999 67779999999874
No 214
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=33.29 E-value=63 Score=22.05 Aligned_cols=35 Identities=9% Similarity=0.171 Sum_probs=30.8
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
..|++...||.|--.-.-.|++.|...|+.+.++.
T Consensus 2 ~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 46889999999999999999999998999988884
No 215
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=33.27 E-value=68 Score=20.22 Aligned_cols=23 Identities=22% Similarity=0.300 Sum_probs=16.1
Q ss_pred hCCCCEEEecCCCcc--HHHHHHHh
Q 039991 145 DHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 145 ~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
..++|+||.|..++. +..+.+.+
T Consensus 49 ~~~~dlvi~D~~~p~~~g~~~~~~l 73 (129)
T 3h1g_A 49 NADTKVLITDWNMPEMNGLDLVKKV 73 (129)
T ss_dssp CTTCCEEEECSCCSSSCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 347999999987754 55665544
No 216
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=33.24 E-value=16 Score=27.65 Aligned_cols=34 Identities=12% Similarity=-0.059 Sum_probs=24.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.+|+++.....| +..|..|+++|++|+++-...
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 3578888533223 577788899999999997653
No 217
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=33.24 E-value=60 Score=26.66 Aligned_cols=40 Identities=13% Similarity=0.279 Sum_probs=34.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
..|+++..+|.|--.-...||..|+.+|.+|.++..+.+.
T Consensus 98 ~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 98 FIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 4566888888899999999999999999999999977553
No 218
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=33.14 E-value=78 Score=22.59 Aligned_cols=60 Identities=13% Similarity=0.093 Sum_probs=36.1
Q ss_pred EEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChh--hhhhhhhhhhcCCCCeEEEEee
Q 039991 38 VFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTP--YVSKSVERANELGIEMDVKTVK 98 (172)
Q Consensus 38 Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~--~~~~~~~~~~~~~~~i~~~~l~ 98 (172)
|+++..+...+-.....+++.|.+.|++|.++....... .++...+... .+.+-+++.+|
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~n-~~~~s~~~~~~ 171 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAAN-SSDSCHLVSIP 171 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHHHHHC-STTCCEEEEEC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhcc-CCCceEEEEec
Confidence 455555555567778899999999999999887643321 1433322211 12345666664
No 219
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=33.11 E-value=73 Score=23.15 Aligned_cols=21 Identities=5% Similarity=-0.023 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 20 G~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 20 GRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 220
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.04 E-value=66 Score=23.69 Aligned_cols=33 Identities=9% Similarity=-0.023 Sum_probs=22.1
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+.| --.+++++|+++|++|.++...
T Consensus 9 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 9 RTIVVAGAGRD---IGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 44555533332 3468999999999999887443
No 221
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=32.89 E-value=42 Score=24.70 Aligned_cols=35 Identities=9% Similarity=0.072 Sum_probs=24.3
Q ss_pred HHHHHhhhCCCCEEEecCCCcc---HHHHHHHhCCCCC
Q 039991 138 PLEQLLRDHKPDCLVADIFFPW---ATDAAAKFGIPRL 172 (172)
Q Consensus 138 ~l~~ll~~~~~d~VI~D~~~~~---a~~vA~~lgiP~v 172 (172)
.+.+++++.+||+|+.-.-... +..+|.+||+|.+
T Consensus 82 ~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~ 119 (217)
T 3ih5_A 82 ILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLT 119 (217)
T ss_dssp HHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCcc
Confidence 3445555568999998864433 3588999998864
No 222
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=32.81 E-value=38 Score=26.06 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=23.2
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+|.|+...-.| .++|+.|+++||+|+++..
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 68888766656 4689999999999998753
No 223
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=32.77 E-value=69 Score=19.76 Aligned_cols=27 Identities=15% Similarity=0.294 Sum_probs=17.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
++++..+||+||.|..++. +..+.+.+
T Consensus 40 ~~~~~~~~dlvi~d~~l~~~~g~~~~~~l 68 (122)
T 1zgz_A 40 EIMQNQSVDLILLDINLPDENGLMLTRAL 68 (122)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHHhcCCCCEEEEeCCCCCCChHHHHHHH
Confidence 3445567999999976653 55555544
No 224
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.50 E-value=56 Score=20.81 Aligned_cols=25 Identities=20% Similarity=0.446 Sum_probs=16.4
Q ss_pred hhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 143 LRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 143 l~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+++.+||+||.|..++. +..+.+++
T Consensus 45 ~~~~~~dlvilD~~lp~~~g~~~~~~l 71 (133)
T 3b2n_A 45 IEEYNPNVVILDIEMPGMTGLEVLAEI 71 (133)
T ss_dssp HHHHCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HhhcCCCEEEEecCCCCCCHHHHHHHH
Confidence 34457899999987653 55555443
No 225
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=32.46 E-value=30 Score=27.52 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=26.4
Q ss_pred EEEcCCCc--cchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 39 FFFPFMAH--GHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 39 lv~p~p~~--GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+=|.... ||+.|.+.-...|++.||++.++...
T Consensus 18 G~~PTG~lHLGn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 18 GMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp EECCCSSCBHHHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred eeCCCCcccHHhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 35555433 88888888888899999999998765
No 226
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=32.28 E-value=27 Score=26.89 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=15.6
Q ss_pred HHHHHHHHHCCCEEEEEe
Q 039991 53 VDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 53 l~La~~La~rGh~Vt~it 70 (172)
+.+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 567888999999999984
No 227
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=31.96 E-value=95 Score=21.53 Aligned_cols=35 Identities=17% Similarity=0.094 Sum_probs=26.6
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+-|+++. ...|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~H-G~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQ-EIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEC-CTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEc-CcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3445554 3456667889999999999999988875
No 228
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=31.89 E-value=81 Score=23.26 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=22.4
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+.| --.+++++|+++|++|.++.-.
T Consensus 9 k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 9 AVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 44555533332 3568899999999998887643
No 229
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=31.89 E-value=1.3e+02 Score=21.07 Aligned_cols=38 Identities=13% Similarity=0.046 Sum_probs=28.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.+|+++-+++..- .-+......|...|++|++++...
T Consensus 23 ~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 46888888876653 344556677888899999999774
No 230
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=31.85 E-value=76 Score=22.67 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=29.2
Q ss_pred EEEEc-CCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 38 VFFFP-FMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 38 Ilv~p-~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
|.+.. -+|.|--.-...||..|+++|.+|.++-...
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 44443 3456888999999999999999999998765
No 231
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.78 E-value=28 Score=22.66 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=23.5
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|+++.. |.+- ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46888863 5443 45788999999999988754
No 232
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=31.71 E-value=89 Score=22.68 Aligned_cols=34 Identities=6% Similarity=0.052 Sum_probs=26.1
Q ss_pred cceEEEEcCCC---c----cchHHHHHHHHHHHHCCCEEEE
Q 039991 35 QLHVFFFPFMA---H----GHMIPIVDMAKLFVTRGVKASV 68 (172)
Q Consensus 35 ~~~Ilv~p~p~---~----GH~~P~l~La~~La~rGh~Vt~ 68 (172)
+..|.|+.... . -...-..+|++.|+++|+.|..
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 34688888642 2 4668899999999999988766
No 233
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=31.67 E-value=43 Score=25.64 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=39.4
Q ss_pred CcceEEEEcCCCccchHHHHHHHHH--------HHHC-CCEEEEEeCCCChhhhhhh
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKL--------FVTR-GVKASVITTPANTPYVSKS 81 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~--------La~r-Gh~Vt~it~~~~~~~~~~~ 81 (172)
++.+|++.+.++-.|-....-++.. |.++ |++|..+...-..+.+...
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 3578999999999999999988877 9999 9999999987655554433
No 234
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=31.62 E-value=43 Score=21.50 Aligned_cols=17 Identities=29% Similarity=0.682 Sum_probs=12.4
Q ss_pred Hhhh-CCCCEEEecCCCc
Q 039991 142 LLRD-HKPDCLVADIFFP 158 (172)
Q Consensus 142 ll~~-~~~d~VI~D~~~~ 158 (172)
.+++ .+||+||.|..++
T Consensus 44 ~l~~~~~~dlvi~D~~l~ 61 (140)
T 3lua_A 44 IFKDLDSITLIIMDIAFP 61 (140)
T ss_dssp TTTTCCCCSEEEECSCSS
T ss_pred HHhcCCCCcEEEEeCCCC
Confidence 4455 6788888887766
No 235
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.59 E-value=62 Score=24.21 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=22.3
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+.| --.+++++|+++|++|.++.-.
T Consensus 25 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 25 QTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 44555533332 3467899999999999877643
No 236
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=31.51 E-value=49 Score=24.70 Aligned_cols=34 Identities=6% Similarity=0.092 Sum_probs=23.4
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++. +.|.+ -..++++|+++||+|+.++-..
T Consensus 3 ~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 3 NKILILG--PTGAI--GRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCEEEES--TTSTT--HHHHHHHHHHHTCCEEEEECCS
T ss_pred cEEEEEC--CCchH--HHHHHHHHHhCCCcEEEEECCC
Confidence 4567665 33444 2467888999999999887553
No 237
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=31.45 E-value=83 Score=19.26 Aligned_cols=25 Identities=24% Similarity=0.409 Sum_probs=16.1
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+++.+||++|.|..++. +..+.+.
T Consensus 39 ~~~~~~~dlil~D~~l~~~~g~~~~~~ 65 (121)
T 2pl1_A 39 YLNEHIPDIAIVDLGLPDEDGLSLIRR 65 (121)
T ss_dssp HHHHSCCSEEEECSCCSSSCHHHHHHH
T ss_pred HHhccCCCEEEEecCCCCCCHHHHHHH
Confidence 344567899999977653 4544444
No 238
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=31.40 E-value=40 Score=25.65 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=24.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..+|.|+.....|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 45788886544454 4788899999999988765
No 239
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=31.34 E-value=26 Score=29.50 Aligned_cols=30 Identities=20% Similarity=0.463 Sum_probs=22.1
Q ss_pred HHHHhhhCCCCEEEecCCCccHHHHHHHhCCCC
Q 039991 139 LEQLLRDHKPDCLVADIFFPWATDAAAKFGIPR 171 (172)
Q Consensus 139 l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~ 171 (172)
+++++++.+||++|.+. ....+|+++|||+
T Consensus 341 l~~~i~~~~pDL~ig~~---~~~~~a~~~giP~ 370 (525)
T 3aek_B 341 VEKAIEAAAPELILGTQ---MERNIAKKLGLPC 370 (525)
T ss_dssp HHHHHHHHCCSEEEECH---HHHHHHHHHTCCE
T ss_pred HHHHHhhcCCCEEEecc---hhHHHHHHcCCCE
Confidence 33445556899999874 4667899999996
No 240
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=31.26 E-value=65 Score=20.57 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=14.2
Q ss_pred CCCCEEEecCCCcc--HHHHHH
Q 039991 146 HKPDCLVADIFFPW--ATDAAA 165 (172)
Q Consensus 146 ~~~d~VI~D~~~~~--a~~vA~ 165 (172)
.+||+||.|..++. +..+.+
T Consensus 59 ~~~dlvi~D~~l~~~~g~~~~~ 80 (146)
T 3ilh_A 59 RWPSIICIDINMPGINGWELID 80 (146)
T ss_dssp CCCSEEEEESSCSSSCHHHHHH
T ss_pred CCCCEEEEcCCCCCCCHHHHHH
Confidence 58999999987654 444444
No 241
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=31.09 E-value=81 Score=20.78 Aligned_cols=27 Identities=15% Similarity=0.054 Sum_probs=22.1
Q ss_pred cchHHHHHHHHHHHHCCCEE-EEEeCCC
Q 039991 47 GHMIPIVDMAKLFVTRGVKA-SVITTPA 73 (172)
Q Consensus 47 GH~~P~l~La~~La~rGh~V-t~it~~~ 73 (172)
......+.++..+++.||+| +++-..+
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 34568899999999999999 8877654
No 242
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=31.07 E-value=71 Score=24.47 Aligned_cols=40 Identities=15% Similarity=0.103 Sum_probs=27.8
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCCh
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANT 75 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~ 75 (172)
++++|++.-==|. |--=+..|++.|.+ +|+|+++.+....
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 4578888873333 33346677777776 8999999998664
No 243
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=31.05 E-value=90 Score=23.35 Aligned_cols=19 Identities=26% Similarity=0.111 Sum_probs=16.3
Q ss_pred HHHHHHHHHHCCCEEEEEe
Q 039991 52 IVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it 70 (172)
-.+++++|+++|++|.++.
T Consensus 23 G~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 23 GWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEee
Confidence 4688999999999998874
No 244
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=30.83 E-value=72 Score=20.56 Aligned_cols=26 Identities=19% Similarity=0.472 Sum_probs=16.9
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.++..+||+||.|..++. +..+.+.+
T Consensus 44 ~~~~~~~dlvllD~~lp~~~g~~l~~~l 71 (141)
T 3cu5_A 44 IALKHPPNVLLTDVRMPRMDGIELVDNI 71 (141)
T ss_dssp HHTTSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 344557999999987653 55555443
No 245
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=30.83 E-value=74 Score=20.14 Aligned_cols=26 Identities=15% Similarity=0.071 Sum_probs=16.6
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+++.+||+||.|..++. +..+.+++
T Consensus 42 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l 69 (132)
T 3crn_A 42 KIENEFFNLALFXIKLPDMEGTELLEKA 69 (132)
T ss_dssp HHHHSCCSEEEECSBCSSSBHHHHHHHH
T ss_pred HHhcCCCCEEEEecCCCCCchHHHHHHH
Confidence 344557999999976643 55554443
No 246
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=30.65 E-value=1.1e+02 Score=23.03 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=26.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+.++++++-.+.| -=.++|++|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4567888766654 347899999999999988764
No 247
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=30.63 E-value=56 Score=24.46 Aligned_cols=26 Identities=31% Similarity=0.244 Sum_probs=18.1
Q ss_pred CCCEEEecCCCcc-------HHHHHHHhCCCCC
Q 039991 147 KPDCLVADIFFPW-------ATDAAAKFGIPRL 172 (172)
Q Consensus 147 ~~d~VI~D~~~~~-------a~~vA~~lgiP~v 172 (172)
+||+|++|-.... |..++-.+|+|+|
T Consensus 103 ~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtI 135 (225)
T 2w36_A 103 KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTI 135 (225)
T ss_dssp CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEE
T ss_pred CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEE
Confidence 7999999975543 2355666688864
No 248
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=30.58 E-value=63 Score=23.23 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=30.6
Q ss_pred cceEEEEcCCCccc-----hHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFFPFMAHGH-----MIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH-----~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
..+|+++| |+|= ..+..+|++.|.++|.+|.|..-+-.
T Consensus 23 A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 65 (180)
T 1pno_A 23 ASKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 65 (180)
T ss_dssp CSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 35788887 6663 35999999999999999999887743
No 249
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=30.54 E-value=97 Score=20.44 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=25.0
Q ss_pred ceEEEEcCCCccchH-HHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMI-PIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~-P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++-....|+-- -.-.+++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 355555445567764 33446667777899999988764
No 250
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=30.49 E-value=31 Score=28.90 Aligned_cols=30 Identities=10% Similarity=0.279 Sum_probs=21.1
Q ss_pred HHHHhhhCCCCEEEecCCCccHHHHHHHhCCCC
Q 039991 139 LEQLLRDHKPDCLVADIFFPWATDAAAKFGIPR 171 (172)
Q Consensus 139 l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~ 171 (172)
+++++++.+||++|.+. ....+|+++|||+
T Consensus 364 l~~~i~~~~pDl~ig~~---~~r~~a~k~gip~ 393 (511)
T 2xdq_B 364 VGDAIARVEPAAIFGTQ---MERHVGKRLNIPC 393 (511)
T ss_dssp HHHHHHHHCCSEEEECH---HHHHHHHHHTCCE
T ss_pred HHHHHHhcCCCEEEecc---chHHHHHhcCCCe
Confidence 33445555788888763 3568899999996
No 251
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=30.42 E-value=55 Score=23.51 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=23.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.++|.++. .|.+- ..+|+.|+++||+|+++..
T Consensus 19 ~~~I~iiG---~G~mG--~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFG---KGNMG--QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHHCCCEEEEEcC
Confidence 46788885 44443 5678889999999998854
No 252
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=30.38 E-value=40 Score=24.20 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 18 G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 18 GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999887643
No 253
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=30.31 E-value=23 Score=26.90 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=23.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC-----C-CEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR-----G-VKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r-----G-h~Vt~it~ 71 (172)
+++|+|+.....| ..+|..|++. | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 4689998544444 3568888888 9 99999864
No 254
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=30.30 E-value=44 Score=28.17 Aligned_cols=30 Identities=17% Similarity=0.373 Sum_probs=20.7
Q ss_pred HHHhhhCCCCEEEecCCCccHHHHHHHh-------CCCCC
Q 039991 140 EQLLRDHKPDCLVADIFFPWATDAAAKF-------GIPRL 172 (172)
Q Consensus 140 ~~ll~~~~~d~VI~D~~~~~a~~vA~~l-------giP~v 172 (172)
++++++.+||++|.... +..+|+++ |||++
T Consensus 431 ~~~i~~~~pDLlig~s~---~k~~a~~~~~~~~~~giP~i 467 (523)
T 3u7q_B 431 RSLVFTDKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLI 467 (523)
T ss_dssp HHHHHHTCCSEEEECTT---HHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHHhcCCCEEEECcc---HHHHHHHhhcccccCCCceE
Confidence 34455568999998853 44567766 99963
No 255
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=30.29 E-value=40 Score=24.31 Aligned_cols=21 Identities=14% Similarity=0.099 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+.+.-.
T Consensus 14 G~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 14 GAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHhCCCEEEEEeCC
Confidence 457889999999999988643
No 256
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=30.25 E-value=43 Score=23.05 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=17.7
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+.+++.+||+||.|..++. |..+.+.
T Consensus 45 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~ 72 (184)
T 3rqi_A 45 KLAGAEKFEFITVXLHLGNDSGLSLIAP 72 (184)
T ss_dssp HHHTTSCCSEEEECSEETTEESHHHHHH
T ss_pred HHHhhCCCCEEEEeccCCCccHHHHHHH
Confidence 3455668999999987654 4555544
No 257
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=30.12 E-value=72 Score=23.83 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=22.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+++|.|+.....|- .||+.|.++||+|+.+..
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 46778777666653 367778888888877654
No 258
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=30.02 E-value=36 Score=26.33 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=23.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+++.....| ..+|..|+++||+|+++...
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 3688988643334 34788899999999988643
No 259
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.86 E-value=96 Score=22.90 Aligned_cols=21 Identities=14% Similarity=-0.175 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-..++++|+++|++|+++.-.
T Consensus 44 G~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 44 GRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEEcC
Confidence 468999999999999887654
No 260
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.84 E-value=66 Score=23.22 Aligned_cols=37 Identities=24% Similarity=0.419 Sum_probs=30.0
Q ss_pred ceEEEEcCCCccc-----hHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFFFPFMAHGH-----MIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv~p~p~~GH-----~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.+|+++| |+|= ..+..+|++.|.++|.+|.|..-+-.
T Consensus 23 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 64 (184)
T 1d4o_A 23 NSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVA 64 (184)
T ss_dssp SEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 5778887 6653 35999999999999999999887743
No 261
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=29.79 E-value=67 Score=20.06 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=16.9
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+...+||+||.|..++. +..+.+++
T Consensus 41 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l 69 (126)
T 1dbw_A 41 AFAPDVRNGVLVTDLRMPDMSGVELLRNL 69 (126)
T ss_dssp HHGGGCCSEEEEEECCSTTSCHHHHHHHH
T ss_pred HHHhcCCCCEEEEECCCCCCCHHHHHHHH
Confidence 3445557899999976643 55555443
No 262
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=29.77 E-value=54 Score=20.23 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=15.3
Q ss_pred hhhCCCCEEEecCCCc---cHHHHHHH
Q 039991 143 LRDHKPDCLVADIFFP---WATDAAAK 166 (172)
Q Consensus 143 l~~~~~d~VI~D~~~~---~a~~vA~~ 166 (172)
+++.+||+||.|.... .+..+.+.
T Consensus 45 ~~~~~~dlvi~d~~~~~~~~g~~~~~~ 71 (127)
T 2gkg_A 45 IRRDRPDLVVLAVDLSAGQNGYLICGK 71 (127)
T ss_dssp HHHHCCSEEEEESBCGGGCBHHHHHHH
T ss_pred HHhcCCCEEEEeCCCCCCCCHHHHHHH
Confidence 3445799999998665 34444443
No 263
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=29.75 E-value=87 Score=19.89 Aligned_cols=22 Identities=9% Similarity=0.132 Sum_probs=15.6
Q ss_pred CCCCEEEecCCCcc--HHHHHHHh
Q 039991 146 HKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 146 ~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+||+||.|..++. |..+.+.+
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~l 74 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMI 74 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHH
Confidence 57999999987754 55555443
No 264
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=29.71 E-value=66 Score=19.77 Aligned_cols=24 Identities=33% Similarity=0.534 Sum_probs=14.9
Q ss_pred hhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 144 RDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 144 ~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
++.+||+||.|..++. +..+.+++
T Consensus 44 ~~~~~dlil~D~~l~~~~g~~~~~~l 69 (120)
T 1tmy_A 44 KELKPDIVTMDITMPEMNGIDAIKEI 69 (120)
T ss_dssp HHHCCSEEEEECSCGGGCHHHHHHHH
T ss_pred HhcCCCEEEEeCCCCCCcHHHHHHHH
Confidence 3347899999877653 44454443
No 265
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=29.61 E-value=69 Score=25.15 Aligned_cols=39 Identities=13% Similarity=0.040 Sum_probs=31.8
Q ss_pred ceEEE-EcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFF-FPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv-~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.+|++ -.-+|.|--.-...||..|+++|.+|.++.....
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 44554 4456669999999999999999999999999854
No 266
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=29.60 E-value=59 Score=21.78 Aligned_cols=25 Identities=28% Similarity=0.327 Sum_probs=16.1
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+++.+||+||.|..+.. +..+.+.
T Consensus 66 ~l~~~~~dlvilD~~l~~~~g~~l~~~ 92 (164)
T 3t8y_A 66 KAIELKPDVITMDIEMPNLNGIEALKL 92 (164)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHH
T ss_pred HhccCCCCEEEEeCCCCCCCHHHHHHH
Confidence 344457999999986654 4555443
No 267
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=29.57 E-value=61 Score=24.57 Aligned_cols=32 Identities=6% Similarity=0.099 Sum_probs=25.5
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++... ....+++.+.++|++|.++.+..
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 577877533 56789999999999999988764
No 268
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=29.56 E-value=74 Score=20.18 Aligned_cols=27 Identities=22% Similarity=0.390 Sum_probs=16.8
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..... +..+.+.+
T Consensus 48 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l 76 (143)
T 3cnb_A 48 DLLHTVKPDVVMLDLMMVGMDGFSICHRI 76 (143)
T ss_dssp HHHHHTCCSEEEEETTCTTSCHHHHHHHH
T ss_pred HHHHhcCCCEEEEecccCCCcHHHHHHHH
Confidence 3444567899999976643 45555443
No 269
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=29.55 E-value=56 Score=21.33 Aligned_cols=27 Identities=30% Similarity=0.484 Sum_probs=17.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..+.. +..+.+.+
T Consensus 55 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l 83 (152)
T 3eul_A 55 ELIKAHLPDVALLDYRMPGMDGAQVAAAV 83 (152)
T ss_dssp HHHHHHCCSEEEEETTCSSSCHHHHHHHH
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHH
Confidence 3455568999999987644 45554443
No 270
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=29.49 E-value=1.3e+02 Score=22.03 Aligned_cols=34 Identities=9% Similarity=0.038 Sum_probs=22.9
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.+++...+ |-+ -.+++++|+++|++|.++....
T Consensus 27 k~vlVTGas-~gI--G~~la~~l~~~G~~v~i~~~r~ 60 (267)
T 4iiu_A 27 RSVLVTGAS-KGI--GRAIARQLAADGFNIGVHYHRD 60 (267)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 345555333 322 4689999999999998876543
No 271
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=29.45 E-value=41 Score=25.34 Aligned_cols=35 Identities=17% Similarity=0.026 Sum_probs=26.6
Q ss_pred ceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|++++.||- = -=-+.+|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGN--NGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 48888885543 2 12378999999999999998654
No 272
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=29.41 E-value=59 Score=20.49 Aligned_cols=22 Identities=27% Similarity=0.613 Sum_probs=14.0
Q ss_pred hCCCCEEEecCCCcc--HHHHHHH
Q 039991 145 DHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 145 ~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+.+||+||.|..++. +..+.+.
T Consensus 46 ~~~~dlvllD~~l~~~~g~~~~~~ 69 (130)
T 1dz3_A 46 EKRPDILLLDIIMPHLDGLAVLER 69 (130)
T ss_dssp HHCCSEEEEESCCSSSCHHHHHHH
T ss_pred cCCCCEEEEecCCCCCCHHHHHHH
Confidence 347899999976653 4444443
No 273
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=29.31 E-value=74 Score=23.76 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=27.1
Q ss_pred EEEEcC-CCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 38 VFFFPF-MAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 38 Ilv~p~-p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
|.+... ++.|--.-.+.|++.|.++|.+|.++=+
T Consensus 24 i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 24 LFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 433333 5558999999999999999999999853
No 274
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.28 E-value=97 Score=23.69 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=41.3
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC---CChhhhhhhhhhhhcC-CCCeEEEEee
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP---ANTPYVSKSVERANEL-GIEMDVKTVK 98 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~---~~~~~~~~~~~~~~~~-~~~i~~~~l~ 98 (172)
.|++.-.+...+-.=+..+++.+.+.|..|+++... .+...+.+..+..... +.+=+++.+|
T Consensus 110 IIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng~~~~~s~~v~v~ 175 (268)
T 4b4t_W 110 IVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTVT 175 (268)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCSSTTTSCEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcCCCCCceeEEEeC
Confidence 344556777788888999999999999999999854 2344444443332111 2345677775
No 275
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=29.27 E-value=83 Score=20.46 Aligned_cols=25 Identities=32% Similarity=0.579 Sum_probs=15.3
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+++.+||+||.|..... +..+.+.
T Consensus 46 ~l~~~~~dlii~D~~l~~~~g~~~~~~ 72 (153)
T 3cz5_A 46 LYRETTPDIVVMDLTLPGPGGIEATRH 72 (153)
T ss_dssp HHHTTCCSEEEECSCCSSSCHHHHHHH
T ss_pred HHhcCCCCEEEEecCCCCCCHHHHHHH
Confidence 344557899999976643 4444443
No 276
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=29.06 E-value=80 Score=20.30 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=29.7
Q ss_pred cceEEEEcCCCccchHHHH-HHHHHHHHCCCE-EEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIV-DMAKLFVTRGVK-ASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l-~La~~La~rGh~-Vt~it~~ 72 (172)
+.+|++++..|.|+-.-+. .|-+.+.++|.+ +.+-...
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~ 57 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCS 57 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEee
Confidence 4689999999999888777 677777889998 7655544
No 277
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=29.04 E-value=1e+02 Score=22.32 Aligned_cols=38 Identities=11% Similarity=0.169 Sum_probs=33.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
...+++...+|.|=-.-...|+..|+ +|.+|.++....
T Consensus 14 ~~i~~~~GkgGvGKTTl~~~La~~l~-~g~~v~vvd~D~ 51 (262)
T 1yrb_A 14 SMIVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDT 51 (262)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCS
T ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 45677889999999999999999999 999999998664
No 278
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=28.99 E-value=71 Score=23.91 Aligned_cols=36 Identities=11% Similarity=0.089 Sum_probs=25.3
Q ss_pred HHHHHHhhhCCCCEEEecCCCccH--HHHHHHhCCCCC
Q 039991 137 EPLEQLLRDHKPDCLVADIFFPWA--TDAAAKFGIPRL 172 (172)
Q Consensus 137 ~~l~~ll~~~~~d~VI~D~~~~~a--~~vA~~lgiP~v 172 (172)
+..++++++.+.|+||........ ..+.+.+|+|+|
T Consensus 164 ~~~~~~~~~~gad~IVLGCTh~p~l~~~i~~~~gVpvI 201 (245)
T 3qvl_A 164 ERCIRALKEDGSGAIVLGSGGMATLAQQLTRELRVPVI 201 (245)
T ss_dssp HHHHHHHHHSCCSEEEECCGGGGGGHHHHHHHHTSCEE
T ss_pred HHHHHHHHhcCCCEEEECCCChHHHHHHHHHHcCCeEE
Confidence 334455555689999999766553 477888899874
No 279
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=28.95 E-value=44 Score=24.09 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=22.4
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++++.. +.|-+ -.+++++|+++|++|.++.-.
T Consensus 8 ~~vlVTG--asggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 8 LRALVTG--AGKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC--CCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3455553 33433 457899999999999887643
No 280
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=28.95 E-value=73 Score=20.32 Aligned_cols=18 Identities=33% Similarity=0.499 Sum_probs=12.2
Q ss_pred HHhhhCCCCEEEecCCCcc
Q 039991 141 QLLRDHKPDCLVADIFFPW 159 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~ 159 (172)
+.+++.+||+||.|. ...
T Consensus 42 ~~l~~~~~dlvi~d~-~~~ 59 (142)
T 2qxy_A 42 TFLRREKIDLVFVDV-FEG 59 (142)
T ss_dssp HHHTTSCCSEEEEEC-TTT
T ss_pred HHHhccCCCEEEEeC-CCC
Confidence 344456789999998 543
No 281
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=28.91 E-value=43 Score=26.82 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=26.7
Q ss_pred ecCchhhhhhhhcCCCCCCCcceEEEE-cCCCccch---HHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 15 NNSSLSLYLIRKLNMGSEIPQLHVFFF-PFMAHGHM---IPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 15 ~~~~~~~~~~~~~~M~~~~~~~~Ilv~-p~p~~GH~---~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..||-|+||..+|. +.+|+++ ...+.=|= ..-..+++.|...|++|+.+-...
T Consensus 8 ~~~~~~~~~~~~m~------~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 64 (386)
T 3e5n_A 8 HHSSENLYFQGHMR------KIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDK 64 (386)
T ss_dssp -------------C------CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred ccccccchhhhhcC------CceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECC
Confidence 35788999999884 4566544 43333443 455688888888999999988653
No 282
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=28.84 E-value=1.2e+02 Score=21.58 Aligned_cols=45 Identities=11% Similarity=-0.071 Sum_probs=37.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVS 79 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~ 79 (172)
..-+++...||.|--.-+++++..++..|..|.+++.+.....+.
T Consensus 23 G~~~~i~G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e~~~~~~~ 67 (247)
T 2dr3_A 23 RNVVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVR 67 (247)
T ss_dssp TCEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEESSSCHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccCCHHHHH
Confidence 346678888999999999999999999999999999887654443
No 283
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=28.79 E-value=44 Score=24.09 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 20 G~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 20 GRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999988653
No 284
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=28.78 E-value=43 Score=25.42 Aligned_cols=35 Identities=6% Similarity=-0.061 Sum_probs=26.5
Q ss_pred ceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|++++.||- = -=-+.+|+.|+.+|++|+++...
T Consensus 86 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEec
Confidence 47888885543 2 13478999999999999998654
No 285
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=28.67 E-value=52 Score=25.42 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=24.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC-CCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR-GVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~ 72 (172)
+++|+|.. +.|-+- ..|+++|+++ ||+|+.+.-.
T Consensus 24 ~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 35788776 344443 5688899998 9999999854
No 286
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=28.51 E-value=1.1e+02 Score=20.92 Aligned_cols=36 Identities=17% Similarity=0.303 Sum_probs=31.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
...|++...+|.|--.-...|++.|..+|+.|.++.
T Consensus 13 ~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~ 48 (186)
T 2yvu_A 13 GIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLD 48 (186)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEee
Confidence 357889999999999999999999999999988775
No 287
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=28.41 E-value=45 Score=25.13 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=23.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|.++.....| ..+++.|+++||+|+++...
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 467777544444 34688899999999998654
No 288
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=28.39 E-value=86 Score=23.80 Aligned_cols=22 Identities=9% Similarity=0.368 Sum_probs=17.0
Q ss_pred HHhHHHHHHHhhhCCCCEEEec
Q 039991 133 TKLQEPLEQLLRDHKPDCLVAD 154 (172)
Q Consensus 133 ~~~~~~l~~ll~~~~~d~VI~D 154 (172)
+.+...+.+++++.+||+||+-
T Consensus 134 ~~l~~~l~~~ir~~~PdvV~t~ 155 (273)
T 3dff_A 134 GEVADDIRSIIDEFDPTLVVTC 155 (273)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEC
Confidence 3556677778888899999983
No 289
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=28.36 E-value=70 Score=23.49 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=30.2
Q ss_pred ceEEEEcCCCccc-----hHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFFFPFMAHGH-----MIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv~p~p~~GH-----~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.+|+++| |+|= ..+..+|++.|.++|.+|.|..-+-.
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 88 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 88 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 5788887 6653 35899999999999999999887743
No 290
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=28.33 E-value=1.1e+02 Score=20.99 Aligned_cols=35 Identities=11% Similarity=0.030 Sum_probs=25.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+-|+++. ...|.-.-+..+++.|+++|+.|..+-.
T Consensus 29 p~vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 29 PVIVIAQ-DIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEC-CTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CEEEEEc-CCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 4455555 3446666788999999999999887763
No 291
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=28.33 E-value=38 Score=28.47 Aligned_cols=30 Identities=13% Similarity=0.357 Sum_probs=21.6
Q ss_pred HHHhhhCCCCEEEecCCCccHHHHHHHh-------CCCCC
Q 039991 140 EQLLRDHKPDCLVADIFFPWATDAAAKF-------GIPRL 172 (172)
Q Consensus 140 ~~ll~~~~~d~VI~D~~~~~a~~vA~~l-------giP~v 172 (172)
++++++.++|++|.+. .+..+|+++ |||++
T Consensus 427 ~~~i~~~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v 463 (519)
T 1qgu_B 427 RSLMFTRQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLI 463 (519)
T ss_dssp HHHHHHHCCSEEEECG---GGHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHhhcCCCEEEECc---chHHHHHHhhcccccCCCCeE
Confidence 3344455899999886 357788888 99963
No 292
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=28.32 E-value=61 Score=20.04 Aligned_cols=25 Identities=28% Similarity=0.500 Sum_probs=15.7
Q ss_pred hhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 143 LRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 143 l~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+++.+||+||.|..++. +..+.+++
T Consensus 41 ~~~~~~dlvi~D~~l~~~~g~~~~~~l 67 (124)
T 1mb3_A 41 ARENKPDLILMDIQLPEISGLEVTKWL 67 (124)
T ss_dssp HHHHCCSEEEEESBCSSSBHHHHHHHH
T ss_pred HhcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 33447899999976653 55555443
No 293
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=28.29 E-value=42 Score=24.41 Aligned_cols=22 Identities=14% Similarity=-0.022 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHCCCEEEEEeCC
Q 039991 51 PIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 51 P~l~La~~La~rGh~Vt~it~~ 72 (172)
--.+++++|+++|++|.++.-.
T Consensus 19 IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 19 LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp HHHHHHHHHHTTTCEEEEEESS
T ss_pred HHHHHHHHHHhCCCEEEEEeCC
Confidence 3468899999999999887643
No 294
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=28.29 E-value=1.1e+02 Score=23.28 Aligned_cols=40 Identities=8% Similarity=0.100 Sum_probs=26.4
Q ss_pred cceEEEEcCC--Cccch-HHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFFPFM--AHGHM-IPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p--~~GH~-~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+.+++++-.| +.|.. .-.-++.+.|.++|+++++..+...
T Consensus 8 m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 8 FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 4455555445 55543 3445777888889999999877654
No 295
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=28.21 E-value=51 Score=25.91 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=25.6
Q ss_pred eEEEEcCCC-c--cchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMA-H--GHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~-~--GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
-..+=|... . ||+.|+.. .+.|++.||++.++...
T Consensus 37 y~G~~PTg~slHlGh~l~l~~-~~~lQ~~g~~~~~~i~D 74 (322)
T 2yxn_A 37 VCGFDPTADSLHLGHLVPLLC-LKRFQQAGHKPVALVGG 74 (322)
T ss_dssp EEEECCSSSSCBHHHHHHHHH-HHHHHHTTCEEEEEECT
T ss_pred EEeecCCCCcccHHHHHHHHH-HHHHHHcCCcEEEEEcc
Confidence 344677654 2 99997655 55889999999988874
No 296
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=27.90 E-value=70 Score=19.83 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=14.5
Q ss_pred hCCCCEEEecCCCcc--HHHHHHHh
Q 039991 145 DHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 145 ~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
..+||+||.|..++. +..+.+.+
T Consensus 45 ~~~~dlvl~D~~l~~~~g~~~~~~l 69 (124)
T 1srr_A 45 KERPDLVLLDMKIPGMDGIEILKRM 69 (124)
T ss_dssp HHCCSEEEEESCCTTCCHHHHHHHH
T ss_pred ccCCCEEEEecCCCCCCHHHHHHHH
Confidence 347899999976643 45554443
No 297
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=27.88 E-value=1.1e+02 Score=22.90 Aligned_cols=34 Identities=9% Similarity=0.007 Sum_probs=23.2
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++++++..+. -+ -.+++++|+++|++|.++.-.
T Consensus 29 gk~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVTGAGA-GI--GLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEETTTTS-TH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 35566654433 22 367899999999999887643
No 298
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=27.85 E-value=44 Score=27.49 Aligned_cols=33 Identities=6% Similarity=0.006 Sum_probs=22.9
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..++|.++.. |.+- +.+|..|++ ||+|+.+-..
T Consensus 35 ~~mkIaVIGl---G~mG--~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGT---GYVG--LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CCCEEEEECC---SHHH--HHHHHHHHT-TSEEEEECSC
T ss_pred CCCEEEEECc---CHHH--HHHHHHHHc-CCeEEEEecC
Confidence 3468988854 4442 346677887 9999998754
No 299
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=27.82 E-value=72 Score=23.49 Aligned_cols=37 Identities=24% Similarity=0.428 Sum_probs=30.2
Q ss_pred ceEEEEcCCCccc-----hHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVFFFPFMAHGH-----MIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Ilv~p~p~~GH-----~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.+|+++| |+|= ..+..+|++.|.++|.+|.|..-+-.
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 87 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVA 87 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccC
Confidence 5788887 6653 35899999999999999999887743
No 300
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.76 E-value=63 Score=20.74 Aligned_cols=23 Identities=22% Similarity=0.352 Sum_probs=14.5
Q ss_pred hCCCCEEEecCCCcc--HHHHHHHh
Q 039991 145 DHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 145 ~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
..+||+||.|..++. +..+.+.+
T Consensus 46 ~~~~dlvllD~~l~~~~g~~l~~~l 70 (137)
T 3cfy_A 46 RSKPQLIILDLKLPDMSGEDVLDWI 70 (137)
T ss_dssp HHCCSEEEECSBCSSSBHHHHHHHH
T ss_pred hcCCCEEEEecCCCCCCHHHHHHHH
Confidence 347899999976643 55555443
No 301
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=27.76 E-value=88 Score=22.82 Aligned_cols=36 Identities=6% Similarity=0.075 Sum_probs=29.3
Q ss_pred EEEE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 38 VFFF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 38 Ilv~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
|.++ +-+|.|--.-...||..|+++|++|.++-...
T Consensus 5 I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 5 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4443 44566889999999999999999999998765
No 302
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=27.75 E-value=42 Score=21.77 Aligned_cols=29 Identities=21% Similarity=-0.048 Sum_probs=18.2
Q ss_pred HHHHHhhh-CCCCEEEecCCCcc--HHHHHHH
Q 039991 138 PLEQLLRD-HKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 138 ~l~~ll~~-~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+..+.+. .+||+||.|..+.. +..+.+.
T Consensus 57 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~ 88 (146)
T 4dad_A 57 QIVQRTDGLDAFDILMIDGAALDTAELAAIEK 88 (146)
T ss_dssp HHTTCHHHHTTCSEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCccHHHHHHH
Confidence 44444455 78999999987755 3444443
No 303
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=27.68 E-value=47 Score=24.57 Aligned_cols=21 Identities=14% Similarity=0.067 Sum_probs=17.2
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 20 GASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 304
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=27.62 E-value=48 Score=24.04 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 20 GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEECCC
Confidence 457899999999999988754
No 305
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=27.52 E-value=91 Score=19.34 Aligned_cols=26 Identities=12% Similarity=0.110 Sum_probs=17.3
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+...+||+||.|..++. +..+.+.+
T Consensus 44 ~~~~~~~dlvi~D~~l~~~~g~~l~~~l 71 (128)
T 1jbe_A 44 KLQAGGYGFVISDWNMPNMDGLELLKTI 71 (128)
T ss_dssp HHTTCCCCEEEEESCCSSSCHHHHHHHH
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHH
Confidence 344557999999987653 55555544
No 306
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=27.51 E-value=39 Score=25.87 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=21.7
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+|+++.....| ..+|+.|+++||+|+++..
T Consensus 2 ~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 57777543333 3568889999999999875
No 307
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=27.44 E-value=33 Score=29.04 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=25.6
Q ss_pred HHHHHHhhhCCCCEEEecCCCccHHHHHHHhCCCCC
Q 039991 137 EPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRL 172 (172)
Q Consensus 137 ~~l~~ll~~~~~d~VI~D~~~~~a~~vA~~lgiP~v 172 (172)
..+++++++.+||++|... ....+|+++|||.+
T Consensus 446 ~el~~~i~~~~pDl~ig~~---~~~~~a~k~gIP~~ 478 (533)
T 1mio_A 446 HDMEVVLEKLKPDMFFAGI---KEKFVIQKGGVLSK 478 (533)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEEccc---chhHHHHhcCCCEE
Confidence 3466777778999999763 45789999999963
No 308
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=27.41 E-value=48 Score=24.36 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 27 G~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 27 GLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999999887643
No 309
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=27.38 E-value=80 Score=19.25 Aligned_cols=23 Identities=22% Similarity=0.528 Sum_probs=14.6
Q ss_pred hhCCCCEEEecCCCcc--HHHHHHH
Q 039991 144 RDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 144 ~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+..+||++|.|..++. +..+.+.
T Consensus 42 ~~~~~dlvl~D~~l~~~~g~~~~~~ 66 (120)
T 2a9o_A 42 EAEQPDIIILDLMLPEIDGLEVAKT 66 (120)
T ss_dssp HHHCCSEEEECSSCSSSCHHHHHHH
T ss_pred HhCCCCEEEEeccCCCCCHHHHHHH
Confidence 3447899999976643 4444443
No 310
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=27.36 E-value=48 Score=24.07 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 27 G~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 27 GSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999887653
No 311
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=27.33 E-value=47 Score=25.97 Aligned_cols=35 Identities=6% Similarity=-0.061 Sum_probs=26.7
Q ss_pred ceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|++++.||- = -=-+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEec
Confidence 47888885543 2 13478999999999999998664
No 312
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=27.32 E-value=65 Score=20.73 Aligned_cols=27 Identities=11% Similarity=0.244 Sum_probs=16.7
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+++.+||+||.|..+.. +..+.+.+
T Consensus 46 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l 74 (147)
T 2zay_A 46 PVAVKTHPHLIITEANMPKISGMDLFNSL 74 (147)
T ss_dssp HHHHHHCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HHHHcCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 3344457999999976643 45555443
No 313
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=27.29 E-value=1.2e+02 Score=23.20 Aligned_cols=21 Identities=10% Similarity=0.324 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 21 G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 21 GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999998877644
No 314
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=27.20 E-value=1.2e+02 Score=21.58 Aligned_cols=37 Identities=11% Similarity=-0.099 Sum_probs=30.9
Q ss_pred ceEEEEcCC-CccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFM-AHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p-~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..|.++..| +.|--.-++.+++++..+|.+|.++.+.
T Consensus 8 g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 8 GWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 456655555 8899999999999999999999999855
No 315
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=27.17 E-value=54 Score=26.98 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=27.2
Q ss_pred eEEEEcCCC-c--cchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 37 HVFFFPFMA-H--GHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 37 ~Ilv~p~p~-~--GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
-..+=|... . ||+.| +...+.|+..||++.++.....
T Consensus 41 y~G~dPTg~sLHlGh~v~-l~~l~~lQ~~G~~~i~lIgD~t 80 (432)
T 1h3f_A 41 KLGADPTRPDLHLGHAVV-LRKMRQFQELGHKVVLIIGDFT 80 (432)
T ss_dssp EEEECTTCCSCBHHHHHH-HHHHHHHHHTTCEEEEEECCCC
T ss_pred EEcccCCCCCCchhhHHH-HHHHHHHHHCCCCEEEEEccce
Confidence 445777753 2 99996 5556678899999999887643
No 316
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=27.08 E-value=53 Score=27.21 Aligned_cols=34 Identities=6% Similarity=0.020 Sum_probs=0.0
Q ss_pred CCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEE
Q 039991 31 SEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVI 69 (172)
Q Consensus 31 ~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~i 69 (172)
+....++|.++.....| +.+|..|+++||+|+++
T Consensus 4 ~~~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~ 37 (478)
T 2y0c_A 4 HHHGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCL 37 (478)
T ss_dssp ---CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred ccCCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEE
No 317
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=27.05 E-value=94 Score=23.29 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=29.2
Q ss_pred EEEE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 38 VFFF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 38 Ilv~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
|+|. +-+|.|--.-...||..|+++|.+|.++-...
T Consensus 7 I~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 7 IVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp EEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4444 33556888999999999999999999998776
No 318
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=27.00 E-value=50 Score=23.89 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 15 G~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 15 GLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999988643
No 319
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=26.99 E-value=54 Score=23.19 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=21.9
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|+++. +.|.+- ..+++.|+++||+|+++...
T Consensus 2 ~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566664 134332 45788899999999988653
No 320
>3oou_A LIN2118 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; HET: BTB; 1.57A {Listeria innocua}
Probab=26.96 E-value=8.8 Score=24.64 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=18.5
Q ss_pred eeeeeecCchhhhhhhhcCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMG 30 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~ 30 (172)
.+.|.+-+.|++.||+...|.
T Consensus 79 ~~Gf~~~s~F~r~Fk~~~G~t 99 (108)
T 3oou_A 79 KSGYTDMAYFYRQFKKHTGET 99 (108)
T ss_dssp HTTCCCHHHHHHHHHHHHSSC
T ss_pred HcCCCChHHHHHHHHHHhCcC
Confidence 457899999999999999886
No 321
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=26.96 E-value=83 Score=20.48 Aligned_cols=26 Identities=12% Similarity=0.196 Sum_probs=16.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHH
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
+.+++.+||+||.|...+. +..+.+.
T Consensus 45 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~ 72 (154)
T 2rjn_A 45 EALKGTSVQLVISDMRMPEMGGEVFLEQ 72 (154)
T ss_dssp HHHTTSCCSEEEEESSCSSSCHHHHHHH
T ss_pred HHHhcCCCCEEEEecCCCCCCHHHHHHH
Confidence 3445567999999976653 4444443
No 322
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=26.95 E-value=74 Score=25.77 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=0.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEE
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVI 69 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~i 69 (172)
++|.++.....| ..+|..|+++||+|+++
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGV 29 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEE
No 323
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=26.90 E-value=50 Score=23.95 Aligned_cols=21 Identities=14% Similarity=0.374 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 24 G~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 24 GLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999999888643
No 324
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=26.88 E-value=52 Score=23.33 Aligned_cols=32 Identities=6% Similarity=0.171 Sum_probs=22.3
Q ss_pred eEEEEcCCCccchHHHHHHHHHHH-HCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFV-TRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La-~rGh~Vt~it~~ 72 (172)
+|++.. +.|-+ -.+++++|+ ++|++|+.+.-.
T Consensus 7 ~vlVtG--asg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILG--AAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEEES--TTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEe--CCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 366664 23333 368899999 899999988744
No 325
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.88 E-value=41 Score=24.34 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 16 G~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 16 GSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp HHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEecC
Confidence 468999999999999887643
No 326
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=26.84 E-value=45 Score=25.88 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=24.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++|+++...+.| ..+|..|++.||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 3578888544444 34688899999999999853
No 327
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=26.83 E-value=50 Score=23.88 Aligned_cols=21 Identities=24% Similarity=0.308 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-..++++|+++|++|+++.-.
T Consensus 19 G~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 19 GLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999887643
No 328
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.83 E-value=50 Score=24.12 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|+++.-
T Consensus 18 G~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 18 GRATLELFAKEGARLVACDI 37 (245)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999998764
No 329
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=26.78 E-value=50 Score=24.22 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=17.8
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 35 G~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 35 GAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999887754
No 330
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=26.76 E-value=2e+02 Score=21.46 Aligned_cols=35 Identities=14% Similarity=-0.040 Sum_probs=26.1
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.++++++-.+.| -=.++|++|++.|.+|.+..-..
T Consensus 7 gKvalVTGas~G---IG~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 7 DKVVIVTGGASG---IGGAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECCc
Confidence 467777766654 23788999999999999887554
No 331
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.72 E-value=1.1e+02 Score=22.50 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=22.1
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.++++..+.| --.+++++|+++|++|.++.-.
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 44555433332 3468999999999999887643
No 332
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.71 E-value=64 Score=20.67 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=16.7
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+...+||+||.|..++. +..+.+.+
T Consensus 43 ~~~~~~~dlvllD~~l~~~~g~~l~~~l 70 (136)
T 2qzj_A 43 KIFSNKYDLIFLEIILSDGDGWTLCKKI 70 (136)
T ss_dssp HHHHCCCSEEEEESEETTEEHHHHHHHH
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHH
Confidence 344557899999976643 55555544
No 333
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=26.71 E-value=90 Score=24.77 Aligned_cols=54 Identities=6% Similarity=-0.023 Sum_probs=39.1
Q ss_pred hhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 19 LSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 19 ~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
|.+++.+.+.=..+..+.+|+++-+++.. ..-+......|.+.|++|+++++..
T Consensus 189 ~al~li~~l~g~~~~~~~ki~ill~dg~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 242 (396)
T 3uk7_A 189 FIQLFVKALGGKITGANKRILFLCGDYME-DYEVKVPFQSLQALGCQVDAVCPEK 242 (396)
T ss_dssp HHHHHHHHTTCEEECCCCEEEEECCTTEE-HHHHHHHHHHHHHHTCEEEEECTTC
T ss_pred HHHHHHHHHhccchhccceEEEEecCCCc-chhHHHHHHHHHHCCCEEEEECCCC
Confidence 67778888774433445689988888775 3445566677778899999999864
No 334
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=26.68 E-value=50 Score=24.01 Aligned_cols=21 Identities=14% Similarity=0.045 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 14 G~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 14 GAATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999987643
No 335
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.59 E-value=51 Score=23.67 Aligned_cols=21 Identities=10% Similarity=0.072 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 15 G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 15 GEAIARALARDGYALALGARS 35 (235)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999998887643
No 336
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=26.58 E-value=72 Score=26.36 Aligned_cols=32 Identities=16% Similarity=-0.025 Sum_probs=0.0
Q ss_pred CCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEE
Q 039991 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVI 69 (172)
Q Consensus 33 ~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~i 69 (172)
..+.+|.++ |-|++- +.+|-.|+++||+|+.+
T Consensus 19 ~~m~~IaVi---GlGYVG--Lp~A~~~A~~G~~V~g~ 50 (444)
T 3vtf_A 19 SHMASLSVL---GLGYVG--VVHAVGFALLGHRVVGY 50 (444)
T ss_dssp CCCCEEEEE---CCSHHH--HHHHHHHHHHTCEEEEE
T ss_pred CCCCEEEEE---ccCHHH--HHHHHHHHhCCCcEEEE
No 337
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=26.58 E-value=56 Score=24.57 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=22.7
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|.|+. -|.+ -..+++.|+++||+|+++...
T Consensus 2 ~~i~iIG---~G~m--G~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIG---LGIM--GSAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEEC---CSHH--HHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEe---ecHH--HHHHHHHHHHCCCeEEEEcCC
Confidence 4677774 3433 245788899999999988654
No 338
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=26.57 E-value=35 Score=28.21 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=24.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..+|+|+.....| +.+|..|+++|++|+++-...
T Consensus 7 ~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGG-----STLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccCC
Confidence 4678888533223 566777889999999997553
No 339
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=26.48 E-value=51 Score=24.07 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 25 G~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 25 GLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp HHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999988754
No 340
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=26.41 E-value=56 Score=24.99 Aligned_cols=35 Identities=9% Similarity=-0.104 Sum_probs=26.7
Q ss_pred ceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|++++.||- = -=-+.+|+.|+.+|++|+++...
T Consensus 80 ~~VlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGN--NGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 48888886543 2 12378999999999999998664
No 341
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=26.40 E-value=50 Score=24.72 Aligned_cols=31 Identities=23% Similarity=0.230 Sum_probs=22.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
+++|+++.....|. .+++.|++.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 35788886544453 46788999999998776
No 342
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=26.35 E-value=40 Score=25.95 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=24.6
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCC-EEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGV-KASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh-~Vt~it~~ 72 (172)
+++|.|+.. |.+- ..+|+.|+++|| +|+++...
T Consensus 24 ~~~I~iIG~---G~mG--~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGF---GEAA--SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECc---cHHH--HHHHHHHHHCCCCeEEEEcCC
Confidence 578999854 4432 478889999999 99988764
No 343
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=26.33 E-value=1.4e+02 Score=23.45 Aligned_cols=45 Identities=9% Similarity=0.019 Sum_probs=38.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVS 79 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~ 79 (172)
..-+++..-|+.|--.-++.+|..++..|..|.+++.+.....+.
T Consensus 46 G~LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql~ 90 (338)
T 4a1f_A 46 GSLVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQLA 90 (338)
T ss_dssp TCEEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHHH
Confidence 345778888999999999999999999999999999987765543
No 344
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=26.33 E-value=31 Score=26.92 Aligned_cols=35 Identities=29% Similarity=0.182 Sum_probs=23.6
Q ss_pred HHHHHHhhh-CCCCEEEecCCCccH--HHHHHHhCCCC
Q 039991 137 EPLEQLLRD-HKPDCLVADIFFPWA--TDAAAKFGIPR 171 (172)
Q Consensus 137 ~~l~~ll~~-~~~d~VI~D~~~~~a--~~vA~~lgiP~ 171 (172)
+.++.+++. .+++-+|.|+|++.| +.+|.++|..+
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ 277 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKW 277 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEE
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCE
Confidence 344455543 266779999999886 57778877543
No 345
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=26.32 E-value=66 Score=20.56 Aligned_cols=26 Identities=15% Similarity=0.267 Sum_probs=16.0
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+...+||+||.|..++. +..+.+.+
T Consensus 39 ~~~~~~~dlvl~D~~lp~~~g~~~~~~l 66 (139)
T 2jk1_A 39 ILEEEWVQVIICDQRMPGRTGVDFLTEV 66 (139)
T ss_dssp HHHHSCEEEEEEESCCSSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 334457899999977653 55544443
No 346
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=26.32 E-value=52 Score=23.84 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-..++++|+++|++|.++.-.
T Consensus 15 G~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 15 GRAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999999887644
No 347
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=26.22 E-value=44 Score=25.66 Aligned_cols=31 Identities=16% Similarity=-0.038 Sum_probs=23.4
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|+++...+.|- .+|..|+ .||+|+++.-.
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 5788886554443 5678889 99999999865
No 348
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=26.20 E-value=70 Score=20.25 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=15.9
Q ss_pred HhhhCCCCEEEecCCCc---cHHHHHHH
Q 039991 142 LLRDHKPDCLVADIFFP---WATDAAAK 166 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~---~a~~vA~~ 166 (172)
.+++.+||+||.|.... .+..+.+.
T Consensus 49 ~~~~~~~dlii~d~~~~~~~~g~~~~~~ 76 (140)
T 3cg0_A 49 CAPDLRPDIALVDIMLCGALDGVETAAR 76 (140)
T ss_dssp HHHHHCCSEEEEESSCCSSSCHHHHHHH
T ss_pred HHHhCCCCEEEEecCCCCCCCHHHHHHH
Confidence 34445799999997664 35545444
No 349
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=26.18 E-value=52 Score=23.95 Aligned_cols=20 Identities=15% Similarity=0.029 Sum_probs=17.1
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 17 G~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 17 GRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999988764
No 350
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=26.16 E-value=39 Score=25.02 Aligned_cols=32 Identities=9% Similarity=0.093 Sum_probs=24.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|++.. + |.+- .+|++.|+++||+|+.++-.
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 5778776 3 5443 46789999999999998754
No 351
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=26.16 E-value=52 Score=24.12 Aligned_cols=20 Identities=10% Similarity=0.215 Sum_probs=16.8
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 32 G~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 32 GRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 45789999999999988764
No 352
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=26.16 E-value=1.7e+02 Score=21.76 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=27.2
Q ss_pred cceEEEEcCCCc----------c-chHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAH----------G-HMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~----------G-H~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
+.+|+++-.... | ...=++.-...|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457777665421 1 24556667778889999999999754
No 353
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=26.16 E-value=52 Score=24.28 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 20 GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999887643
No 354
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=26.15 E-value=47 Score=25.40 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=24.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCC--EEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGV--KASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh--~Vt~it~~ 72 (172)
+++|+++. -|.+--. ++..|+.+|| +|+++...
T Consensus 7 ~mkI~IiG---aG~vG~~--~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIG---AGAVGST--LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEEC---CSHHHHH--HHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEEC---CCHHHHH--HHHHHHhCCCCCEEEEEeCC
Confidence 46899885 3665443 6778999999 99988765
No 355
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=26.11 E-value=62 Score=20.88 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=16.2
Q ss_pred HHhhhC-CCCEEEecCCCcc--HHHHHH
Q 039991 141 QLLRDH-KPDCLVADIFFPW--ATDAAA 165 (172)
Q Consensus 141 ~ll~~~-~~d~VI~D~~~~~--a~~vA~ 165 (172)
+.+++. +||+||.|..++. +..+.+
T Consensus 53 ~~l~~~~~~dlvilD~~l~~~~g~~~~~ 80 (145)
T 3kyj_B 53 DKLAAQPNVDLILLDIEMPVMDGMEFLR 80 (145)
T ss_dssp HHHHHCTTCCEEEECTTSCCCTTCHHHH
T ss_pred HHHhcCCCCCEEEEeCCCCCCCHHHHHH
Confidence 344455 7999999987654 344443
No 356
>3mn2_A Probable ARAC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=26.03 E-value=9.3 Score=24.46 Aligned_cols=22 Identities=9% Similarity=0.060 Sum_probs=18.9
Q ss_pred eeeeeecCchhhhhhhhcCCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMGS 31 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~~ 31 (172)
.+.|.+-+.|++.||+...|..
T Consensus 78 ~~Gf~~~s~F~r~Fk~~~G~tP 99 (108)
T 3mn2_A 78 SCGFSNLGHFARDYRDMFGEKP 99 (108)
T ss_dssp HTTCCCHHHHHHHHHHHHSSCH
T ss_pred HhCCCCHHHHHHHHHHHHCcCh
Confidence 4578999999999999999863
No 357
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=26.03 E-value=22 Score=27.63 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=23.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..|++++.+ |.+- ..+++.|.++|+ |+++...
T Consensus 115 ~~~viI~G~---G~~g--~~l~~~L~~~g~-v~vid~~ 146 (336)
T 1lnq_A 115 SRHVVICGW---SEST--LECLRELRGSEV-FVLAEDE 146 (336)
T ss_dssp -CEEEEESC---CHHH--HHHHTTGGGSCE-EEEESCG
T ss_pred cCCEEEECC---cHHH--HHHHHHHHhCCc-EEEEeCC
Confidence 468988864 4443 578999999999 8887544
No 358
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=26.02 E-value=52 Score=24.46 Aligned_cols=21 Identities=14% Similarity=0.128 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 34 G~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 34 GFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999887643
No 359
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=25.92 E-value=53 Score=24.02 Aligned_cols=20 Identities=25% Similarity=0.194 Sum_probs=16.7
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 20 G~~ia~~l~~~G~~V~~~~r 39 (250)
T 2fwm_X 20 GYATALAFVEAGAKVTGFDQ 39 (250)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 35789999999999998754
No 360
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=25.84 E-value=54 Score=23.73 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=22.3
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.+++...+ |- --.+++++|+++|++|.++.-.
T Consensus 15 k~vlITGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 15 RVILVTGAA-RG--IGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp CEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEEecC
Confidence 455555333 32 3457899999999999887643
No 361
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=25.83 E-value=53 Score=24.26 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 26 G~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 26 GRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 362
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.82 E-value=84 Score=21.67 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=26.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.-|+++. ...|+-.-+..+++.|+++|+.|..+--+
T Consensus 23 ~~vv~~H-G~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 58 (251)
T 3dkr_A 23 TGVVLLH-AYTGSPNDMNFMARALQRSGYGVYVPLFS 58 (251)
T ss_dssp EEEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred ceEEEeC-CCCCCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 3455444 34456667789999999999999887655
No 363
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=25.67 E-value=54 Score=23.86 Aligned_cols=20 Identities=20% Similarity=0.111 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 19 G~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 19 GQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEEC
Confidence 46889999999999988764
No 364
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=25.66 E-value=55 Score=23.60 Aligned_cols=21 Identities=5% Similarity=0.112 Sum_probs=17.2
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 20 GRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467889999999999887643
No 365
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=25.50 E-value=55 Score=23.83 Aligned_cols=21 Identities=14% Similarity=0.077 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 22 G~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 22 GQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999887643
No 366
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.50 E-value=42 Score=24.10 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 15 G~~la~~l~~~G~~V~~~~r~ 35 (242)
T 1uay_A 15 GRAAALALKARGYRVVVLDLR 35 (242)
T ss_dssp HHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEccC
Confidence 468899999999999987643
No 367
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=25.48 E-value=55 Score=23.78 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 16 G~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 16 GRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 468899999999999887643
No 368
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=25.42 E-value=54 Score=24.26 Aligned_cols=31 Identities=13% Similarity=-0.064 Sum_probs=22.0
Q ss_pred EEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 38 VFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 38 Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.++++..+ |- --.+++++|+++|++|.++.-
T Consensus 13 ~~lVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVITGGA-RR--IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEETTCS-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCC-cH--HHHHHHHHHHHCCCEEEEEeC
Confidence 45555333 32 356889999999999998865
No 369
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=25.41 E-value=59 Score=26.15 Aligned_cols=25 Identities=12% Similarity=0.345 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 49 MIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 49 ~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.-++.+|.+.|.++|++|.+++...
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 4699999999999999999999763
No 370
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=25.39 E-value=55 Score=23.91 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 20 GRAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999987654
No 371
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=25.36 E-value=1.2e+02 Score=22.97 Aligned_cols=22 Identities=14% Similarity=0.425 Sum_probs=17.0
Q ss_pred HHhHHHHHHHhhhCCCCEEEec
Q 039991 133 TKLQEPLEQLLRDHKPDCLVAD 154 (172)
Q Consensus 133 ~~~~~~l~~ll~~~~~d~VI~D 154 (172)
+.+...+.+++++.+||+|++-
T Consensus 131 ~~~~~~l~~~ir~~~PdvV~t~ 152 (270)
T 3dfi_A 131 AAIREDIESMIAECDPTLVLTC 152 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeC
Confidence 3566777778888899999873
No 372
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=25.35 E-value=78 Score=23.75 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=23.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+++|+|+.....|. .+++.|++.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 46899986544454 357889999999987654
No 373
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=25.33 E-value=55 Score=24.03 Aligned_cols=21 Identities=14% Similarity=0.151 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 18 G~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 18 GAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 374
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=25.32 E-value=55 Score=23.99 Aligned_cols=21 Identities=10% Similarity=-0.007 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 27 G~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 27 GHAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999999987643
No 375
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=25.31 E-value=48 Score=25.23 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=25.2
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|.|+.....|. .+|+.|+++||+|+++....
T Consensus 16 ~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 5789986555453 57888999999999986543
No 376
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=25.28 E-value=55 Score=24.08 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=22.6
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+.| --.+++++|+++|++|.++.-.
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34555543332 3478999999999999887643
No 377
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=25.23 E-value=94 Score=23.89 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=24.3
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHH--CCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVT--RGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~--rGh~Vt~it~~ 72 (172)
.++|+|... .|-+ -..|+++|++ +|++|+.+.-.
T Consensus 10 ~~~vlVTGa--tG~I--G~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 10 NQTILITGG--AGFV--GSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TCEEEEETT--TSHH--HHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCEEEEECC--CCHH--HHHHHHHHHhhCCCCeEEEEECC
Confidence 467777753 3433 3468899999 99999998753
No 378
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.22 E-value=55 Score=24.01 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 19 G~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 19 GRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999887654
No 379
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.20 E-value=1e+02 Score=19.17 Aligned_cols=27 Identities=26% Similarity=0.228 Sum_probs=16.9
Q ss_pred HHhhhC-CCCEEEecCCCcc---HHHHHHHh
Q 039991 141 QLLRDH-KPDCLVADIFFPW---ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~-~~d~VI~D~~~~~---a~~vA~~l 167 (172)
+.+++. +||+||.|..... +..+.+.+
T Consensus 43 ~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l 73 (132)
T 2rdm_A 43 EMLKSGAAIDGVVTDIRFCQPPDGWQVARVA 73 (132)
T ss_dssp HHHHTTCCCCEEEEESCCSSSSCHHHHHHHH
T ss_pred HHHHcCCCCCEEEEeeeCCCCCCHHHHHHHH
Confidence 344455 7999999986642 45554443
No 380
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=25.17 E-value=56 Score=23.88 Aligned_cols=21 Identities=10% Similarity=0.145 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 20 GEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999887643
No 381
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=25.15 E-value=63 Score=25.39 Aligned_cols=33 Identities=24% Similarity=0.179 Sum_probs=23.8
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..+|+|+...- --+.+|..|+++|++|+++-..
T Consensus 26 ~~dV~IVGaG~-----aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 26 DKNVAIIGGGP-----VGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCEEEECCCH-----HHHHHHHHHHHCCCCEEEEeCC
Confidence 45788885332 2356777899999999999643
No 382
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=25.14 E-value=55 Score=24.07 Aligned_cols=22 Identities=32% Similarity=0.295 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHCCCEEEEEeCC
Q 039991 51 PIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 51 P~l~La~~La~rGh~Vt~it~~ 72 (172)
--.+++++|+++|++|.++.-.
T Consensus 28 iG~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 28 IGETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp HHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEcCC
Confidence 3468899999999999888543
No 383
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=25.12 E-value=1.5e+02 Score=22.02 Aligned_cols=24 Identities=13% Similarity=0.322 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 50 IPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 50 ~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.=+..-...|.+.|++|+++++..
T Consensus 29 ~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 29 VEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 456666777888999999999763
No 384
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=25.09 E-value=49 Score=23.81 Aligned_cols=19 Identities=11% Similarity=0.015 Sum_probs=16.3
Q ss_pred HHHHHHHHHHCCCEEEEEe
Q 039991 52 IVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it 70 (172)
-.+++++|+++|++|+++.
T Consensus 14 G~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 14 GRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEc
Confidence 4678999999999999873
No 385
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=25.01 E-value=56 Score=24.00 Aligned_cols=21 Identities=10% Similarity=0.048 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 20 GFASALELARNGARLLLFSRN 40 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999887643
No 386
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=25.00 E-value=80 Score=24.53 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=24.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCC-CEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRG-VKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rG-h~Vt~it~~ 72 (172)
.++|+|.. +.|-+ -..|+++|+++| ++|+.+.-.
T Consensus 32 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 32 NTNVMVVG--GAGFV--GSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp TCEEEEET--TTSHH--HHHHHHHHHHTTCSEEEEECCC
T ss_pred CCEEEEEC--CccHH--HHHHHHHHHHcCCceEEEEECC
Confidence 35677775 33443 367889999999 999998644
No 387
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=24.98 E-value=48 Score=24.81 Aligned_cols=32 Identities=13% Similarity=0.196 Sum_probs=22.1
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|++.. +.|.+ -.+|+++|+++||+|+.+.-.
T Consensus 2 ~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 2 RIVVTG--GAGFI--GSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEECCC
T ss_pred EEEEEC--CCChH--HHHHHHHHHhCCCEEEEEeCC
Confidence 455554 33433 346899999999999988643
No 388
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.98 E-value=1.4e+02 Score=22.06 Aligned_cols=38 Identities=5% Similarity=-0.072 Sum_probs=26.4
Q ss_pred ceEEEEcCCCc-cchH---HHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAH-GHMI---PIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~-GH~~---P~l~La~~La~rGh~Vt~it~~~ 73 (172)
++|+++..+.. .|-. ....+++.|.++||+|.++....
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 46777653221 2333 45689999999999999998763
No 389
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.95 E-value=56 Score=24.00 Aligned_cols=20 Identities=10% Similarity=0.157 Sum_probs=16.8
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 25 G~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 25 GAAIARALDKAGATVAIADL 44 (263)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999988764
No 390
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=24.90 E-value=33 Score=26.81 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=22.8
Q ss_pred HHHHHhhh-CCCCEEEecCCCccH--HHHHHHhCCCC
Q 039991 138 PLEQLLRD-HKPDCLVADIFFPWA--TDAAAKFGIPR 171 (172)
Q Consensus 138 ~l~~ll~~-~~~d~VI~D~~~~~a--~~vA~~lgiP~ 171 (172)
.++.+++. .+++-+|.|+|++.| ..+|.++|..+
T Consensus 231 l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ 267 (319)
T 1eg2_A 231 VIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNS 267 (319)
T ss_dssp HHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEE
T ss_pred HHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcE
Confidence 34445443 266779999999886 47777777543
No 391
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=24.89 E-value=52 Score=23.80 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 24 G~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 24 GKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp HHHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 457899999999999987643
No 392
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=24.89 E-value=57 Score=23.99 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 20 GLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999887643
No 393
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=24.85 E-value=57 Score=23.98 Aligned_cols=21 Identities=5% Similarity=0.022 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 22 G~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 22 GYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 394
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.83 E-value=1.1e+02 Score=19.10 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=14.1
Q ss_pred CCCCEEEecCCCcc--HHHHHHH
Q 039991 146 HKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 146 ~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+||+||.|..+.. +..+.+.
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~ 76 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAE 76 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHH
T ss_pred CCCcEEEEecCCCcccHHHHHHH
Confidence 57899999976643 4544444
No 395
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis}
Probab=24.78 E-value=69 Score=26.39 Aligned_cols=34 Identities=24% Similarity=0.437 Sum_probs=25.6
Q ss_pred eEEEEcCCC-c--cchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 37 HVFFFPFMA-H--GHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 37 ~Ilv~p~p~-~--GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
-..+=|..- . ||+.|++. .++|+..||++.++..
T Consensus 36 y~G~dPTg~sLHLGhlv~l~~-l~~lQ~~G~~~i~lIg 72 (432)
T 2jan_A 36 YAGFDPTAPSLHAGHLVPLLT-LRRFQRAGHRPIVLAG 72 (432)
T ss_dssp EEEECCSSSSCBGGGHHHHHH-HHHHHHTTCEEEEEEC
T ss_pred EEeeCCCCCCcCHHHHHHHHH-HHHHHHCCCcEEEEEc
Confidence 445777753 2 99998876 5688999999998863
No 396
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=24.75 E-value=1.4e+02 Score=20.93 Aligned_cols=37 Identities=5% Similarity=-0.026 Sum_probs=26.1
Q ss_pred cceEEEEcCCCccc--hHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGH--MIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH--~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..-|+++.. ..|+ ..-+..+++.|+++|+.|..+--.
T Consensus 46 ~p~vv~~HG-~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHG-FTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECC-TTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcC-CCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 344555543 3333 566889999999999999888755
No 397
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=24.73 E-value=70 Score=22.45 Aligned_cols=33 Identities=12% Similarity=-0.087 Sum_probs=22.3
Q ss_pred HHHHHhhhCCCCEEEecCCCcc---HHHHHHHhCCCCC
Q 039991 138 PLEQLLRDHKPDCLVADIFFPW---ATDAAAKFGIPRL 172 (172)
Q Consensus 138 ~l~~ll~~~~~d~VI~D~~~~~---a~~vA~~lgiP~v 172 (172)
.+.++++ +||+|+.-.-... +..+|.+||+|.+
T Consensus 62 ~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~ 97 (166)
T 3fet_A 62 GILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTA 97 (166)
T ss_dssp HHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCce
Confidence 3444554 8999998764322 3588999998853
No 398
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=24.73 E-value=1.1e+02 Score=23.87 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=19.8
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|+|+..|..+- +..+.|.++||+|..+.+.
T Consensus 4 mmrIvf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 4 MIKVVFMGTPDFSV-----PVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp TSEEEEECCSTTHH-----HHHHHHHHTTCEEEEEECC
T ss_pred ceEEEEEeCCHHHH-----HHHHHHHHCCCcEEEEEeC
Confidence 56777776664432 2335566667777665554
No 399
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=24.71 E-value=1.3e+02 Score=22.19 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=31.5
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+..|++...||.|--.-...|++.|...|..+.++..
T Consensus 4 ~~lIvl~G~pGSGKSTla~~La~~L~~~g~~~i~~~~ 40 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGS 40 (260)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHHhCCCEEEEECc
Confidence 4678899999999999999999999889988776654
No 400
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=24.68 E-value=58 Score=26.16 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=27.9
Q ss_pred ceEEEEcCCCc-cchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAH-GHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~-GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|+++.==+. ..+.=++.|++.|.++|++|++..=.
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 57776663333 56666689999999999999987743
No 401
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=24.67 E-value=57 Score=25.23 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=24.6
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCC-CEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRG-VKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rG-h~Vt~it~~ 72 (172)
++|.|+.....| ..+|+.|+++| |+|+++...
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 578888644334 67889999999 999988754
No 402
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=24.66 E-value=72 Score=22.30 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=16.1
Q ss_pred hhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 144 RDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 144 ~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
++.+||+||.|..++. +..+.+.+
T Consensus 48 ~~~~~dlvllD~~lp~~~g~~~~~~l 73 (215)
T 1a04_A 48 ESLDPDLILLDLNMPGMNGLETLDKL 73 (215)
T ss_dssp HHHCCSEEEEETTSTTSCHHHHHHHH
T ss_pred HhcCCCEEEEeCCCCCCcHHHHHHHH
Confidence 3447899999987754 55555544
No 403
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=24.65 E-value=55 Score=23.60 Aligned_cols=20 Identities=10% Similarity=-0.074 Sum_probs=16.8
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++..
T Consensus 18 G~~~a~~l~~~G~~V~~~~~ 37 (247)
T 2hq1_A 18 GKAIAWKLGNMGANIVLNGS 37 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 46889999999999998843
No 404
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=24.61 E-value=49 Score=25.05 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=23.3
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++|++.. +.|.+ -.+|+++|+++||+|+.+.-.
T Consensus 4 ~~vlVtG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRALITG--IRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEC--CCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 4566664 33443 356889999999999988754
No 405
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=24.60 E-value=1.1e+02 Score=19.56 Aligned_cols=21 Identities=24% Similarity=0.234 Sum_probs=14.6
Q ss_pred CCCCEEEecCCCc---cHHHHHHH
Q 039991 146 HKPDCLVADIFFP---WATDAAAK 166 (172)
Q Consensus 146 ~~~d~VI~D~~~~---~a~~vA~~ 166 (172)
.+||+||.|..++ .+..+.+.
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~ 72 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALA 72 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHH
T ss_pred CCCCEEEEeccCCCCCCHHHHHHH
Confidence 6899999998764 35555443
No 406
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=24.58 E-value=68 Score=23.15 Aligned_cols=36 Identities=19% Similarity=0.412 Sum_probs=29.7
Q ss_pred ceEEEEcCCCccc-----hHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHGH-----MIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~GH-----~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+|+++| |+|= ..+..+|++.|.++|.+|.|..-+-
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 5788887 6653 3599999999999999999988774
No 407
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.58 E-value=71 Score=23.75 Aligned_cols=33 Identities=9% Similarity=-0.040 Sum_probs=22.1
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+. ---.++|++|+++|++|.+....
T Consensus 28 k~~lVTGas~---GIG~aia~~la~~G~~Vv~~~~~ 60 (267)
T 3u5t_A 28 KVAIVTGASR---GIGAAIAARLASDGFTVVINYAG 60 (267)
T ss_dssp CEEEEESCSS---HHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEcCC
Confidence 4455543333 23468999999999999887543
No 408
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.58 E-value=58 Score=23.95 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=16.8
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 21 G~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 21 GRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999988764
No 409
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=24.57 E-value=81 Score=26.33 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=28.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..||.|+...+.| |-.+|+.|.++|++|+..=...
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~~ 53 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDANI 53 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCCC
Confidence 4678888776665 6689999999999999987653
No 410
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=24.55 E-value=58 Score=24.01 Aligned_cols=20 Identities=10% Similarity=0.144 Sum_probs=17.1
Q ss_pred HHHHHHHHHCCCEEEEEeCC
Q 039991 53 VDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 53 l~La~~La~rGh~Vt~it~~ 72 (172)
.+++++|+++|++|.++.-.
T Consensus 25 ~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 25 YGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEcCc
Confidence 57899999999999987644
No 411
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=24.50 E-value=46 Score=25.36 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=23.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..+|+|+... -. -+..|..|+++|++|+++-..
T Consensus 4 ~~dvvIIG~G---~~--Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAG---VV--GLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCS---HH--HHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCC---HH--HHHHHHHHHhCCCeEEEEeCC
Confidence 3578887533 22 366778899999999999754
No 412
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=24.50 E-value=59 Score=23.55 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 18 G~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 18 GFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 368999999999999877654
No 413
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.47 E-value=1.2e+02 Score=19.15 Aligned_cols=22 Identities=14% Similarity=0.398 Sum_probs=15.8
Q ss_pred CCCCEEEecCCCcc--HHHHHHHh
Q 039991 146 HKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 146 ~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+||+||.|..+.. +..+.+.+
T Consensus 61 ~~~dlvi~D~~l~~~~g~~~~~~l 84 (149)
T 1k66_A 61 PRPAVILLDLNLPGTDGREVLQEI 84 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHH
T ss_pred CCCcEEEEECCCCCCCHHHHHHHH
Confidence 68999999987653 55555554
No 414
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=24.43 E-value=61 Score=24.63 Aligned_cols=26 Identities=35% Similarity=0.313 Sum_probs=18.0
Q ss_pred CCCEEEecCCCcc-------HHHHHHHhCCCCC
Q 039991 147 KPDCLVADIFFPW-------ATDAAAKFGIPRL 172 (172)
Q Consensus 147 ~~d~VI~D~~~~~-------a~~vA~~lgiP~v 172 (172)
+||++++|-.... |..++-.+|+|+|
T Consensus 109 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtI 141 (246)
T 3ga2_A 109 EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTI 141 (246)
T ss_dssp CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEE
T ss_pred CCCEEEEcCcEEecCCCcchhheeeeecCCCEE
Confidence 7999999965432 3466666677764
No 415
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=24.43 E-value=59 Score=23.69 Aligned_cols=21 Identities=14% Similarity=0.047 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++...
T Consensus 17 G~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 17 GRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999999887653
No 416
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=24.42 E-value=51 Score=27.96 Aligned_cols=24 Identities=13% Similarity=0.236 Sum_probs=21.6
Q ss_pred chHHHHHHHHHHHHCCCEEEEEeC
Q 039991 48 HMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 48 H~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++..|.+++++|.++|++|.++..
T Consensus 65 l~saMr~fa~~L~~~G~~v~y~~~ 88 (522)
T 3zxs_A 65 ILAAMRKFARRLQERGFRVAYSRL 88 (522)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHHHHHHhCCCeEEEEec
Confidence 467899999999999999999884
No 417
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=24.40 E-value=59 Score=23.84 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=16.8
Q ss_pred HHHHHHHHHCCCEEEEEeCC
Q 039991 53 VDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 53 l~La~~La~rGh~Vt~it~~ 72 (172)
.+++++|+++|++|.++.-.
T Consensus 14 ~aia~~l~~~G~~V~~~~r~ 33 (248)
T 3asu_A 14 ECITRRFIQQGHKVIATGRR 33 (248)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887643
No 418
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=24.39 E-value=69 Score=23.58 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=29.6
Q ss_pred cceEE-EE-cCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVF-FF-PFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Il-v~-p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+++++ |+ +-+|.|--.-...||..|+ +|.+|.++-....
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 34444 43 3444588899999999999 9999999987754
No 419
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=24.38 E-value=59 Score=23.82 Aligned_cols=21 Identities=14% Similarity=0.102 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 15 G~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 15 GKAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 420
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.37 E-value=70 Score=20.12 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=13.1
Q ss_pred CCCCEEEecCCCcc--HHHHHHH
Q 039991 146 HKPDCLVADIFFPW--ATDAAAK 166 (172)
Q Consensus 146 ~~~d~VI~D~~~~~--a~~vA~~ 166 (172)
.+||+||.|..++. +..+.+.
T Consensus 45 ~~~dlii~d~~l~~~~g~~~~~~ 67 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVNGIQVLET 67 (134)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHH
T ss_pred cCCCEEEEecCCCCCChHHHHHH
Confidence 46888888876543 4444443
No 421
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=24.32 E-value=55 Score=23.96 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHCCCEEEEEeC
Q 039991 51 PIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 51 P~l~La~~La~rGh~Vt~it~ 71 (172)
--.+++++|+++|++|.++.-
T Consensus 18 iG~~ia~~l~~~G~~V~~~~r 38 (253)
T 1hxh_A 18 VGLEVVKLLLGEGAKVAFSDI 38 (253)
T ss_dssp HHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 356789999999999888753
No 422
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.31 E-value=48 Score=21.26 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=11.5
Q ss_pred hhhCCCCEEEecCCCcc
Q 039991 143 LRDHKPDCLVADIFFPW 159 (172)
Q Consensus 143 l~~~~~d~VI~D~~~~~ 159 (172)
+++.+||+||.|..+..
T Consensus 42 ~~~~~~dlvi~D~~l~~ 58 (140)
T 3n53_A 42 IDHHHPDLVILDMDIIG 58 (140)
T ss_dssp HHHHCCSEEEEETTC--
T ss_pred HhcCCCCEEEEeCCCCC
Confidence 34457999999987654
No 423
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=24.31 E-value=59 Score=23.73 Aligned_cols=21 Identities=19% Similarity=0.154 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 15 G~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 15 GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999999887643
No 424
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=24.27 E-value=72 Score=20.21 Aligned_cols=17 Identities=29% Similarity=0.751 Sum_probs=11.6
Q ss_pred HhhhCCCCEEEecCCCc
Q 039991 142 LLRDHKPDCLVADIFFP 158 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~ 158 (172)
.+++.+||+||.|....
T Consensus 42 ~l~~~~~dlvi~d~~~~ 58 (140)
T 2qr3_A 42 VLREENPEVVLLDMNFT 58 (140)
T ss_dssp HHHHSCEEEEEEETTTT
T ss_pred HHHcCCCCEEEEeCCcC
Confidence 33445788898887654
No 425
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=24.22 E-value=59 Score=23.75 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 22 G~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 22 GEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 368999999999999887643
No 426
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.19 E-value=59 Score=24.08 Aligned_cols=21 Identities=24% Similarity=0.259 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 19 G~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 19 GRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 427
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=24.18 E-value=54 Score=24.87 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=24.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+++|++.. +.|.+ -..|++.|+++||+|+.+.-.
T Consensus 13 ~M~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLG--ATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 35788775 33433 356789999999999998754
No 428
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=24.15 E-value=78 Score=25.39 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=29.0
Q ss_pred ceEEEEcCC-CccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFM-AHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p-~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
++|+++... |.|--.-...||..|+++|.+|-++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 456655443 448888899999999999999999998
No 429
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=24.15 E-value=1.3e+02 Score=23.15 Aligned_cols=39 Identities=13% Similarity=-0.013 Sum_probs=32.0
Q ss_pred ceEE-EEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 36 LHVF-FFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 36 ~~Il-v~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
.+|+ +-.-+|.|--.-...||..|+++|++|-++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3444 44556669999999999999999999999998865
No 430
>2k9s_A Arabinose operon regulatory protein; activator, arabinose catabolism, carbohydrate metabolism, cytoplasm, DNA-binding, repressor, transcription; NMR {Escherichia coli}
Probab=24.14 E-value=11 Score=24.17 Aligned_cols=21 Identities=14% Similarity=0.162 Sum_probs=18.6
Q ss_pred eeeeeecCchhhhhhhhcCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMG 30 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~ 30 (172)
.+.|.+.+.|++.||+...|.
T Consensus 78 ~~Gf~~~s~F~r~Fk~~~G~t 98 (107)
T 2k9s_A 78 NVGFDDQLYFSRVFKKCTGAS 98 (107)
T ss_dssp HTTCCCHHHHHHHHHHHHSSC
T ss_pred HhCCCCHHHHHHHHHHHHCcC
Confidence 457999999999999999886
No 431
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=24.12 E-value=60 Score=23.77 Aligned_cols=21 Identities=14% Similarity=0.107 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 29 G~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 29 AYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEecc
Confidence 368999999999999887644
No 432
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=24.11 E-value=1.2e+02 Score=24.67 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=25.1
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..+|+|+...+.| +..|+.|+++|++|+..-...
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeCCc
Confidence 4688888754333 346999999999999987643
No 433
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=24.06 E-value=39 Score=27.47 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=25.8
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..||+|+.+ |.+ -..+++.|.++|++|+++-...
T Consensus 4 ~~~viIiG~---Gr~--G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGF---GRF--GQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECC---CHH--HHHHHHHHHHCCCCEEEEECCH
Confidence 468888864 443 3467899999999999998663
No 434
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=24.05 E-value=59 Score=24.31 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=21.9
Q ss_pred EEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 38 VFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 38 Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++++..+. -+ -.+++++|+++|++|.++.-.
T Consensus 23 ~vlVTGas~-gI--G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 23 TLFITGATS-GF--GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp EEEESSTTT-SS--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 455553333 22 357899999999999987643
No 435
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=24.04 E-value=51 Score=24.74 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=20.5
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
+|+|.. +.|-+ -.+|+++|+++||+|+.+.
T Consensus 3 ~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTG--GTGFL--GSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp EEEEES--TTSHH--HHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEC--ChhHH--HHHHHHHHHHCCCEEEEEE
Confidence 455554 33333 2568899999999999765
No 436
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=24.04 E-value=1.4e+02 Score=24.24 Aligned_cols=45 Identities=9% Similarity=-0.062 Sum_probs=38.4
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVS 79 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~ 79 (172)
..-+++..-||.|--.-.+++|...+.+|..|.+++.+....++.
T Consensus 197 G~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 197 RNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp SCEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 345778888999999999999999999999999999987655544
No 437
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=24.03 E-value=64 Score=24.18 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=22.0
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+|.|+.....|. .+++.|++.||+|+++...
T Consensus 2 ~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHH-----HHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 567775444443 5788899999999887643
No 438
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=24.00 E-value=54 Score=24.91 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=21.8
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.+|+|.. +.|-+- .+|+++|+++||+|+.+.-
T Consensus 6 ~~vlVTG--atGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 6 ETVCVTG--ASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp CEEEETT--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 4555554 344432 5688999999999987653
No 439
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=24.00 E-value=59 Score=24.24 Aligned_cols=34 Identities=9% Similarity=0.050 Sum_probs=23.8
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++++++..+.| --.+++++|+++|++|.++.-.
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 455666644432 3468999999999999887644
No 440
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=23.98 E-value=1.8e+02 Score=21.90 Aligned_cols=37 Identities=8% Similarity=-0.058 Sum_probs=27.8
Q ss_pred ceEEEEcCCCcc--c---hHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 36 LHVFFFPFMAHG--H---MIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 36 ~~Ilv~p~p~~G--H---~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.+|+++.. |.| | +.....+++.|.++||+|..+.+..
T Consensus 14 ~~v~vl~g-g~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 14 GKVAVLFG-GESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp CEEEEECC-CSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ceEEEEEC-CCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56776653 343 3 4578999999999999999998553
No 441
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=23.97 E-value=60 Score=23.75 Aligned_cols=20 Identities=20% Similarity=0.008 Sum_probs=17.2
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 34 G~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 34 GRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 46789999999999988765
No 442
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=23.92 E-value=95 Score=19.67 Aligned_cols=28 Identities=11% Similarity=-0.181 Sum_probs=19.4
Q ss_pred HHHhhh-CCCCEEEecCCCcc--HHHHHHHh
Q 039991 140 EQLLRD-HKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 140 ~~ll~~-~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+.+++ .+||+||.|..+.. +..+.+.+
T Consensus 52 l~~l~~~~~~dlvilD~~l~~~~g~~~~~~l 82 (138)
T 2b4a_A 52 FQHRSQLSTCDLLIVSDQLVDLSIFSLLDIV 82 (138)
T ss_dssp HHTGGGGGSCSEEEEETTCTTSCHHHHHHHH
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 345566 68999999987653 56666655
No 443
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=23.89 E-value=61 Score=23.61 Aligned_cols=20 Identities=30% Similarity=0.110 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|+++.-
T Consensus 20 G~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 20 GKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 46899999999999998765
No 444
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=23.87 E-value=61 Score=23.65 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHCCCEEEEEeC
Q 039991 51 PIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 51 P~l~La~~La~rGh~Vt~it~ 71 (172)
--.+++++|+++|++|.++.-
T Consensus 27 IG~~ia~~l~~~G~~V~~~~r 47 (247)
T 1uzm_A 27 IGLAIAQRLAADGHKVAVTHR 47 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 356789999999999998754
No 445
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=23.87 E-value=1.7e+02 Score=22.36 Aligned_cols=45 Identities=9% Similarity=-0.062 Sum_probs=37.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCChhhhh
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPANTPYVS 79 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~ 79 (172)
..-+++..-||.|--.-.+.++...+.+|..|.+++.+.....+.
T Consensus 68 G~l~li~G~pG~GKTtl~l~ia~~~a~~g~~vl~~slE~s~~~l~ 112 (315)
T 3bh0_A 68 RNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 112 (315)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHHHHHTTTCEEEEEESSSCHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEECCCCHHHHH
Confidence 345778888999999999999999999999999999986655443
No 446
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=23.86 E-value=1.1e+02 Score=25.19 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=26.7
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..||.|+...+.| |-.+|+.|.++|++|+..=..
T Consensus 22 ~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~~ 55 (494)
T 4hv4_A 22 VRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDLA 55 (494)
T ss_dssp CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEECC
Confidence 4689999877666 335799999999999987544
No 447
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=23.86 E-value=90 Score=22.73 Aligned_cols=27 Identities=22% Similarity=0.407 Sum_probs=18.4
Q ss_pred HHhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 141 QLLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 141 ~ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
+.+.+.+||+||.|..++. +..+.+++
T Consensus 75 ~~~~~~~~DlvllD~~lp~~~G~~l~~~l 103 (249)
T 3q9s_A 75 IKAREDHPDLILLDLGLPDFDGGDVVQRL 103 (249)
T ss_dssp HHHHHSCCSEEEEECCSCHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 3455568999999988765 45555443
No 448
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=23.85 E-value=1.8e+02 Score=21.56 Aligned_cols=39 Identities=8% Similarity=0.180 Sum_probs=24.2
Q ss_pred cceEE-EEcCCCc-cchHHHHH-HHHHHHHCCCEEEEEeCCC
Q 039991 35 QLHVF-FFPFMAH-GHMIPIVD-MAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 35 ~~~Il-v~p~p~~-GH~~P~l~-La~~La~rGh~Vt~it~~~ 73 (172)
+++|+ +..+|-. |.-.-++. +++.+.+.|++|.++--..
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~ 75 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSG 75 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTT
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhc
Confidence 45666 5555544 44434444 5666677899999987643
No 449
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=23.85 E-value=61 Score=24.03 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 21 G~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 21 GRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEecC
Confidence 467899999999999887643
No 450
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.82 E-value=60 Score=24.17 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=21.8
Q ss_pred EEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 38 VFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 38 Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.++++..+ |- --.+++++|+++|++|.++.-.
T Consensus 8 ~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 8 TVIITGSS-NG--IGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp EEEETTCS-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 45555333 32 3467899999999999887643
No 451
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=23.76 E-value=1.8e+02 Score=22.08 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=40.4
Q ss_pred eeecCchhhhhhhhcCCCCC------CCcceEEEEcCCC-------------ccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 13 FTNNSSLSLYLIRKLNMGSE------IPQLHVFFFPFMA-------------HGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 13 ~~~~~~~~~~~~~~~~M~~~------~~~~~Ilv~p~p~-------------~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
|-...|++.|--.|.|-+.. ....+|+|+-... .-+..=+......|.+.|++|+++++..
T Consensus 20 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g 99 (291)
T 1n57_A 20 FPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISG 99 (291)
T ss_dssp ECCHHHHHHHCCSSCCCCCCCCSSCCCSSCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCChhhHHHhcCCccCcccCcCccccCCCCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 44445666666777775432 1234888887653 1344566677777888999999999754
No 452
>3oio_A Transcriptional regulator (ARAC-type DNA-binding containing proteins); PSI-2, midwest center for structural genomics; 1.65A {Chromobacterium violaceum}
Probab=23.74 E-value=11 Score=24.45 Aligned_cols=22 Identities=14% Similarity=0.250 Sum_probs=19.0
Q ss_pred eeeeeecCchhhhhhhhcCCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMGS 31 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~~ 31 (172)
.+.|.+-+.|++.||+...|..
T Consensus 81 ~~Gf~~~s~F~r~Fk~~~G~tP 102 (113)
T 3oio_A 81 ACGFSSGPHFSSTYRNHFNITP 102 (113)
T ss_dssp HTTCSCHHHHHHHHHHHHSSCH
T ss_pred HHCCCCHHHHHHHHHHHHCcCH
Confidence 4578999999999999999863
No 453
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=23.73 E-value=50 Score=24.07 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 27 G~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 27 GLAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp HHHHHHHHHHTTEEEEEEES
T ss_pred HHHHHHHHHHCCCeEEEEeC
Confidence 36889999999999998875
No 454
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=23.65 E-value=1.2e+02 Score=20.34 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=20.2
Q ss_pred ceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.|++++.-+.+.- .-...+++.|+++|++|..+.-+
T Consensus 5 p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 5 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 44666654443322 12222445677888888777554
No 455
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=23.63 E-value=1.4e+02 Score=18.66 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=24.2
Q ss_pred CcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+.+|+++- .+-.-...|.+.|.+.|++|......
T Consensus 6 ~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~~ 40 (136)
T 3hdv_A 6 ARPLVLVVD----DNAVNREALILYLKSRGIDAVGADGA 40 (136)
T ss_dssp -CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESSH
T ss_pred CCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCCH
Confidence 356788773 45556667788888889998875543
No 456
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.63 E-value=43 Score=26.13 Aligned_cols=26 Identities=27% Similarity=0.313 Sum_probs=13.5
Q ss_pred CCCEEEecCCCcc-HHHHHHHhCCCCC
Q 039991 147 KPDCLVADIFFPW-ATDAAAKFGIPRL 172 (172)
Q Consensus 147 ~~d~VI~D~~~~~-a~~vA~~lgiP~v 172 (172)
+||+||....... ...+.+++|||++
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv 122 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVV 122 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEE
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEE
Confidence 6777776543211 1234456677753
No 457
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=23.62 E-value=1.2e+02 Score=19.22 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=15.4
Q ss_pred CCCCEEEecCCCcc--HHHHHHHh
Q 039991 146 HKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 146 ~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+||+||.|..... +..+.+.+
T Consensus 58 ~~~dlii~D~~l~~~~g~~~~~~l 81 (143)
T 2qvg_A 58 IHPKLILLDINIPKMNGIEFLKEL 81 (143)
T ss_dssp CCCSEEEEETTCTTSCHHHHHHHH
T ss_pred CCCCEEEEecCCCCCCHHHHHHHH
Confidence 57999999986643 55555554
No 458
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=23.59 E-value=62 Score=23.77 Aligned_cols=21 Identities=10% Similarity=0.003 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 36 G~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 36 GSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEecCC
Confidence 358999999999999887643
No 459
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=23.57 E-value=62 Score=23.83 Aligned_cols=21 Identities=10% Similarity=0.105 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 20 GLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999887643
No 460
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=23.57 E-value=62 Score=24.02 Aligned_cols=21 Identities=14% Similarity=-0.046 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|..+.-.
T Consensus 18 G~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 18 GRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999887654
No 461
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=23.54 E-value=62 Score=24.06 Aligned_cols=33 Identities=9% Similarity=-0.092 Sum_probs=23.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.+.+++...+.| --.+++++|+++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 355555544433 346899999999999988764
No 462
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=23.54 E-value=60 Score=24.67 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=26.6
Q ss_pred hhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCC-------CEEEEEeCC
Q 039991 24 IRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRG-------VKASVITTP 72 (172)
Q Consensus 24 ~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rG-------h~Vt~it~~ 72 (172)
|+.++|. .++|++.. +.|.+- ..|+++|+++| ++|+.+.-.
T Consensus 7 ~~~~~~~----~~~vlVtG--a~G~iG--~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 7 RENLYFQ----GMHIAIIG--AAGMVG--RKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CCCSCCS----CEEEEEET--TTSHHH--HHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred CCCCCcc----CCEEEEEC--CCcHHH--HHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 3444454 34677765 334442 57889999999 899887643
No 463
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=23.45 E-value=49 Score=24.84 Aligned_cols=31 Identities=19% Similarity=0.048 Sum_probs=22.0
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEe
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVIT 70 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it 70 (172)
++|++.. +.|-+ -..|+++|+++||+|+.+.
T Consensus 3 ~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTG--ATGLL--GRAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHTTTCEEEEEC
T ss_pred CeEEEEC--CCcHH--HHHHHHHHHhCCCeEEEEc
Confidence 3566665 33433 2468899999999999887
No 464
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=23.42 E-value=1.1e+02 Score=21.68 Aligned_cols=37 Identities=8% Similarity=-0.048 Sum_probs=27.0
Q ss_pred cceEEEEcCCC----ccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 35 QLHVFFFPFMA----HGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 35 ~~~Ilv~p~p~----~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+..|.++.... .-...-..+|++.|+++|+.|..=..
T Consensus 13 ~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg 53 (176)
T 2iz6_A 13 KPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGR 53 (176)
T ss_dssp CCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 45788877544 23456778888899999988877665
No 465
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=23.38 E-value=62 Score=24.17 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=22.6
Q ss_pred eEEEEcCCCc-cchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAH-GHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~-GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.++++..+. |-+ -.+++++|+++|++|.++.-.
T Consensus 22 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSI--AYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeCC
Confidence 3455554331 333 457899999999999987644
No 466
>3lsg_A Two-component response regulator YESN; structural genomics, PSI-2, protein structure initiative, MCSG; 2.05A {Fusobacterium nucleatum}
Probab=23.38 E-value=11 Score=23.91 Aligned_cols=21 Identities=10% Similarity=0.172 Sum_probs=18.3
Q ss_pred eeeeeecCchhhhhhhhcCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMG 30 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~ 30 (172)
.+.|.+.+.|++.||+...|.
T Consensus 77 ~~Gf~~~s~F~r~Fk~~~G~t 97 (103)
T 3lsg_A 77 QVGFEDVNYFITKFKKYYQIT 97 (103)
T ss_dssp HTTCSCHHHHHHHHHHHHSSC
T ss_pred HhCCCCHHHHHHHHHHHHCcC
Confidence 456899999999999999876
No 467
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=23.35 E-value=63 Score=23.71 Aligned_cols=20 Identities=10% Similarity=0.044 Sum_probs=16.8
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 18 G~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 18 GRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999988754
No 468
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=23.33 E-value=62 Score=24.21 Aligned_cols=21 Identities=14% Similarity=0.222 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|+++.-.
T Consensus 39 G~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 39 GKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468899999999999887644
No 469
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=23.31 E-value=1.7e+02 Score=19.81 Aligned_cols=38 Identities=8% Similarity=-0.030 Sum_probs=25.2
Q ss_pred cceEEEEcC----CCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPF----MAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~----p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+-|+++.. .+.+.-..+..+++.|+++|+.|..+.-.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFR 78 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecC
Confidence 445555553 13333345788999999999998877644
No 470
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=23.31 E-value=64 Score=23.64 Aligned_cols=33 Identities=6% Similarity=0.047 Sum_probs=22.3
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+. - --.+++++|+++|++|.++.-.
T Consensus 13 k~vlVTGas~-g--IG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 13 RIILVTGASD-G--IGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp CEEEEESTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCC-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4555553332 2 2468899999999999887643
No 471
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.30 E-value=63 Score=23.95 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 19 G~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 19 GRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 472
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=23.29 E-value=60 Score=23.77 Aligned_cols=21 Identities=10% Similarity=0.108 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 17 G~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 17 GLGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp HHHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999887644
No 473
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=23.25 E-value=62 Score=24.25 Aligned_cols=21 Identities=14% Similarity=0.097 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 29 G~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 29 GAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 368999999999999887643
No 474
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=23.23 E-value=1.4e+02 Score=22.85 Aligned_cols=38 Identities=11% Similarity=0.331 Sum_probs=27.6
Q ss_pred CcceEEEEcCCCccchHHH--HHHHHHHHHCC-CEEEEEeCC
Q 039991 34 PQLHVFFFPFMAHGHMIPI--VDMAKLFVTRG-VKASVITTP 72 (172)
Q Consensus 34 ~~~~Ilv~p~p~~GH~~P~--l~La~~La~rG-h~Vt~it~~ 72 (172)
++.+||++. ...+|-.+- ..|++.|.+.| ++|++....
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 467888884 333886444 57777778888 999999865
No 475
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=23.15 E-value=56 Score=26.23 Aligned_cols=32 Identities=9% Similarity=0.027 Sum_probs=23.1
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
.+|+|+...- --+.+|..|+++|++|+++--.
T Consensus 23 ~~ViIVGaGp-----aGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGT-----AGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHH-----HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEECCcH-----HHHHHHHHHHHCCCeEEEEcCC
Confidence 4687775321 2356788899999999999754
No 476
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=23.14 E-value=11 Score=24.68 Aligned_cols=22 Identities=9% Similarity=0.082 Sum_probs=19.1
Q ss_pred eeeeeecCchhhhhhhhcCCCC
Q 039991 10 KVAFTNNSSLSLYLIRKLNMGS 31 (172)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~M~~ 31 (172)
.+.|.+-+.|++.||+...|..
T Consensus 80 ~~Gf~~~s~F~r~Fk~~~G~tP 101 (120)
T 3mkl_A 80 SCGYHSVSYFIYVFRNYYGMTP 101 (120)
T ss_dssp HTTCSCHHHHHHHHHHHHSSCH
T ss_pred HHCCCCHHHHHHHHHHHHCcCH
Confidence 4578999999999999999874
No 477
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=23.14 E-value=80 Score=25.43 Aligned_cols=46 Identities=22% Similarity=0.171 Sum_probs=23.3
Q ss_pred chhhhhhhhcCCCCCCCcceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 18 SLSLYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 18 ~~~~~~~~~~~M~~~~~~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
..|+|++. |.. ...+|+|+. -|..- +..|..|+++|++|+++-...
T Consensus 15 ~~n~~~~~---M~~--~~~dViIIG---gG~AG--l~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 15 TENLYFQS---MVA--EKQDVVIIG---AGAAG--MMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp ------------------CCEEEEC---CSHHH--HHHHHHHHHTTCCEEEECSSS
T ss_pred cccccccc---ccC--CCCCEEEEC---cCHHH--HHHHHHHHHCCCcEEEEeCCC
Confidence 46778876 321 246788874 44433 446677899999999996543
No 478
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=23.12 E-value=56 Score=24.25 Aligned_cols=33 Identities=6% Similarity=0.002 Sum_probs=22.7
Q ss_pred EEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 38 VFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 38 Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
.++++..+.| --.+++++|+++|++|.++.-..
T Consensus 29 ~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 29 PILITGASQR---VGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 3555433332 34689999999999999887553
No 479
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=23.12 E-value=56 Score=22.30 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-+.+|..|+++|.+||++...
T Consensus 13 Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 13 GLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHHHCCCcEEEEeCC
Confidence 478899999999999999864
No 480
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=23.11 E-value=61 Score=23.27 Aligned_cols=21 Identities=19% Similarity=-0.020 Sum_probs=17.1
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++...
T Consensus 14 G~~la~~l~~~G~~v~~~~~r 34 (244)
T 1edo_A 14 GKAIALSLGKAGCKVLVNYAR 34 (244)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999886433
No 481
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=23.10 E-value=54 Score=25.92 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=21.5
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
+|+|+.....| +..|..|+++|++|+++=.
T Consensus 3 dVvVIGaG~aG-----l~aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSG-----LKAARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHH-----HHHHHHHHHcCCeEEEEec
Confidence 56666432223 6778899999999999964
No 482
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=23.07 E-value=65 Score=23.57 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=22.7
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
++++++..+. - --.+++++|+++|++|.++.-.
T Consensus 10 k~~lVTGas~-g--IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 10 KVALVTGASR-G--IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp CEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4555554333 2 3468999999999999887643
No 483
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=23.04 E-value=65 Score=23.77 Aligned_cols=20 Identities=20% Similarity=0.308 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 34 G~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 34 GLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999988764
No 484
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.93 E-value=65 Score=23.79 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=22.6
Q ss_pred eEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 37 HVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 37 ~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.++++..+. - --.+++++|+++|++|.++.-.
T Consensus 11 k~vlVTGas~-g--IG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 11 RSVVVTGGTK-G--IGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp CEEEETTCSS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4555554333 2 3467899999999999887643
No 485
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=22.91 E-value=1.6e+02 Score=22.29 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=28.7
Q ss_pred cCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 42 PFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 42 p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
+-+|.|--.-...||..|+++|.+|.++-....
T Consensus 100 ~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 100 VSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp SSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 346779999999999999999999999988754
No 486
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.89 E-value=97 Score=23.83 Aligned_cols=38 Identities=8% Similarity=0.113 Sum_probs=28.8
Q ss_pred cceEEEEcCCCccch-HHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHM-IPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 72 (172)
+.+|+++.-|..+.. ....++.+.|.++|++|.+..+.
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 42 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAE 42 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecch
Confidence 357888888888765 45778899999999999886544
No 487
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.86 E-value=61 Score=23.79 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 17 G~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 17 GLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp HHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHcCCEEEEEeCC
Confidence 578999999999999887543
No 488
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=22.86 E-value=65 Score=23.95 Aligned_cols=20 Identities=15% Similarity=0.353 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCEEEEEeC
Q 039991 52 IVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~ 71 (172)
-.+++++|+++|++|.++.-
T Consensus 22 G~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 22 GAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46789999999999988764
No 489
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=22.85 E-value=1.6e+02 Score=20.56 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=34.9
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 74 (172)
...+++...||.|--.-...+++.+..+|..+.++.....
T Consensus 52 ~~~~ll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~ 91 (242)
T 3bos_A 52 VQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIH 91 (242)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHH
Confidence 4688999999999999999999999999999998886543
No 490
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=22.83 E-value=39 Score=25.26 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=22.1
Q ss_pred HHHHHhhhC-CCCEEEecCCCccH--HHHHHHhCCC
Q 039991 138 PLEQLLRDH-KPDCLVADIFFPWA--TDAAAKFGIP 170 (172)
Q Consensus 138 ~l~~ll~~~-~~d~VI~D~~~~~a--~~vA~~lgiP 170 (172)
.++.+++.. +++-+|.|+|++.| ..+|.++|..
T Consensus 201 l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~ 236 (260)
T 1g60_A 201 LIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRN 236 (260)
T ss_dssp HHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCe
Confidence 344444432 56679999999886 4677777754
No 491
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=22.81 E-value=67 Score=25.38 Aligned_cols=19 Identities=11% Similarity=0.191 Sum_probs=16.2
Q ss_pred HHHHHHHHHCCCEEEEEeC
Q 039991 53 VDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 53 l~La~~La~rGh~Vt~it~ 71 (172)
+..|..|+++|++|+++=.
T Consensus 13 LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 13 LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp HHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHCCCeEEEEeC
Confidence 6678889999999999864
No 492
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=22.79 E-value=86 Score=21.73 Aligned_cols=26 Identities=38% Similarity=0.618 Sum_probs=17.4
Q ss_pred HhhhCCCCEEEecCCCcc--HHHHHHHh
Q 039991 142 LLRDHKPDCLVADIFFPW--ATDAAAKF 167 (172)
Q Consensus 142 ll~~~~~d~VI~D~~~~~--a~~vA~~l 167 (172)
.+++.+||+||.|..++. +..+.+.+
T Consensus 53 ~~~~~~~dlvi~D~~~p~~~g~~~~~~l 80 (205)
T 1s8n_A 53 LAELHKPDLVIMDVKMPRRDGIDAASEI 80 (205)
T ss_dssp HHHHHCCSEEEEESSCSSSCHHHHHHHH
T ss_pred HHhhcCCCEEEEeCCCCCCChHHHHHHH
Confidence 444558999999987754 55555443
No 493
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=22.78 E-value=1e+02 Score=22.12 Aligned_cols=37 Identities=3% Similarity=-0.070 Sum_probs=27.0
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..-|++++..+ |+-.-+..+++.|+++|++|..+-..
T Consensus 46 ~p~vv~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKN-FCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCC-CcchHHHHHHHHHHHCCCeEEEeecC
Confidence 34566665433 44456888999999999999988755
No 494
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=22.74 E-value=66 Score=23.62 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=17.3
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.++|++|+++|++|.++.-.
T Consensus 22 G~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 22 AWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEecCc
Confidence 468899999999999887544
No 495
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=22.72 E-value=1.1e+02 Score=25.41 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=27.2
Q ss_pred cceEEEEcCCCccchHHHHHHHHHHHHC-CC-EEEEEeCCCC
Q 039991 35 QLHVFFFPFMAHGHMIPIVDMAKLFVTR-GV-KASVITTPAN 74 (172)
Q Consensus 35 ~~~Ilv~p~p~~GH~~P~l~La~~La~r-Gh-~Vt~it~~~~ 74 (172)
.++|.++.....| ..+|..|+++ || +|+++.....
T Consensus 18 ~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 4689999655555 4688889999 99 9999886644
No 496
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=22.72 E-value=1.4e+02 Score=22.41 Aligned_cols=35 Identities=11% Similarity=0.111 Sum_probs=27.5
Q ss_pred eEEEEcC-CCccchHHHHHHHHHHHHCCCEEEEEeC
Q 039991 37 HVFFFPF-MAHGHMIPIVDMAKLFVTRGVKASVITT 71 (172)
Q Consensus 37 ~Ilv~p~-p~~GH~~P~l~La~~La~rGh~Vt~it~ 71 (172)
.|.+... ++.|--.-.+.|++.|.++|.+|.++=+
T Consensus 28 ~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 28 ILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 4444433 3558999999999999999999999863
No 497
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=22.71 E-value=85 Score=21.90 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=22.9
Q ss_pred ceEEEEcCCCccchHHHHHHHHHHHHCCCEEEEEeCC
Q 039991 36 LHVFFFPFMAHGHMIPIVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 36 ~~Ilv~p~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 72 (172)
..|++++..+. .-.-+..++..|+++|++|..+-.+
T Consensus 5 ~~vv~lHG~~~-~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 5 HHFVLVHNAYH-GAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp CEEEEECCTTC-CGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred CcEEEECCCCC-ccccHHHHHHHHHhCCCEEEEecCC
Confidence 44555554433 3333667888888888888877644
No 498
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=22.70 E-value=66 Score=23.90 Aligned_cols=21 Identities=5% Similarity=0.015 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-.+++++|+++|++|.++.-.
T Consensus 34 G~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 34 GYAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999887643
No 499
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.70 E-value=66 Score=23.87 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCEEEEEeCC
Q 039991 52 IVDMAKLFVTRGVKASVITTP 72 (172)
Q Consensus 52 ~l~La~~La~rGh~Vt~it~~ 72 (172)
-..+++.|+++|++|+++.-.
T Consensus 45 G~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 45 GAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 468899999999999887643
No 500
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=22.65 E-value=2.2e+02 Score=20.91 Aligned_cols=45 Identities=9% Similarity=-0.175 Sum_probs=34.7
Q ss_pred CCCCCCcceEEEEcCC-CccchHHHHHHHHHHHHCCCEEEEEeCCC
Q 039991 29 MGSEIPQLHVFFFPFM-AHGHMIPIVDMAKLFVTRGVKASVITTPA 73 (172)
Q Consensus 29 M~~~~~~~~Ilv~p~p-~~GH~~P~l~La~~La~rGh~Vt~it~~~ 73 (172)
|.....+..|.++..+ +.|--.-++.++++...+|-+|.++.+..
T Consensus 21 ~~~~~~~G~l~vitG~MgsGKTT~lL~~a~r~~~~g~kVli~k~~~ 66 (214)
T 2j9r_A 21 MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCI 66 (214)
T ss_dssp CCCCCCSCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEECC-
T ss_pred ccccCCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4432234566666666 88999999999999999999999998664
Done!