BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039995
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WY68|1A1D_THEMA Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=TM_0225 PE=3 SV=1
Length = 312
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 20 KGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHT 79
+G GYAI +SE++ +K++A+ G++LDPVY+ KA GM+ +M +N +K VLF+HT
Sbjct: 244 RGPGYAIPSSEDVEILKEVASIEGIILDPVYTAKAFRGMI-EMFRNSEK----NVLFIHT 298
Query: 80 GGLLGLF 86
GG+ GLF
Sbjct: 299 GGIFGLF 305
>sp|O57809|1A1D_PYRHO Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0054 PE=1 SV=2
Length = 325
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y T E ++ + G++LDPVY+GKA YG++ D+A+ K G K+LF+HTGG+
Sbjct: 256 YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLV-DLAR--KGELGEKILFIHTGGIS 312
Query: 84 GLFDKVDQMAPLL 96
G F D++ LL
Sbjct: 313 GTFHYGDKLLSLL 325
>sp|Q9V2L2|1A1D_PYRAB Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus
abyssi (strain GE5 / Orsay) GN=PYRAB00630 PE=3 SV=1
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 13 TRQPRL-SKGLG-YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWE 70
++PR+ G G Y E +K + G++LDPVY+GKA YG++ D+A+ K
Sbjct: 247 VQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLM-DLAK--KGDL 303
Query: 71 GRKVLFVHTGGLLGLFDKVDQMAPLL 96
G VLF+HTGGL G+F ++M LL
Sbjct: 304 GESVLFIHTGGLPGIFHYGEEMLELL 329
>sp|Q8U4R3|1A1D_PYRFU Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF0010 PE=3 SV=2
Length = 329
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWE-GRKVLFVHTGGL 82
Y T E ++ + GV+LDPVY+GKA YG+L D+A KK E G K+LF+HTGG+
Sbjct: 260 YGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLL-DLA---KKGELGEKILFIHTGGI 315
Query: 83 LGLFDKVDQMAPLL 96
G F D++ L
Sbjct: 316 SGTFHYGDKILSFL 329
>sp|B7NBR4|DCYD_ECOLU D-cysteine desulfhydrase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=dcyD PE=3 SV=1
Length = 328
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRCKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q1RAM1|DCYD_ECOUT D-cysteine desulfhydrase OS=Escherichia coli (strain UTI89 / UPEC)
GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7NRG1|DCYD_ECO7I D-cysteine desulfhydrase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7MCH6|DCYD_ECO45 D-cysteine desulfhydrase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7UST8|DCYD_ECO27 D-cysteine desulfhydrase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5YRU5|DCYD_ECO5E D-cysteine desulfhydrase OS=Escherichia coli O157:H7 (strain EC4115
/ EHEC) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q8XBC7|DCYD_ECO57 D-cysteine desulfhydrase OS=Escherichia coli O157:H7 GN=dcyD PE=3
SV=3
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B1LQT7|DCYD_ECOSM D-cysteine desulfhydrase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|P76316|DCYD_ECOLI D-cysteine desulfhydrase OS=Escherichia coli (strain K12) GN=dcyD
PE=1 SV=4
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B1IZY5|DCYD_ECOLC D-cysteine desulfhydrase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B1X677|DCYD_ECODH D-cysteine desulfhydrase OS=Escherichia coli (strain K12 / DH10B)
GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|C4ZQJ7|DCYD_ECOBW D-cysteine desulfhydrase OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7MWA6|DCYD_ECO81 D-cysteine desulfhydrase OS=Escherichia coli O81 (strain ED1a)
GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7L8T2|DCYD_ECO55 D-cysteine desulfhydrase OS=Escherichia coli (strain 55989 / EAEC)
GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|P59329|DCYD_ECOL6 D-cysteine desulfhydrase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=dcyD PE=3 SV=2
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|P59330|DCYD_SHIFL D-cysteine desulfhydrase OS=Shigella flexneri GN=dcyD PE=3 SV=2
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q0T3K8|DCYD_SHIF8 D-cysteine desulfhydrase OS=Shigella flexneri serotype 5b (strain
8401) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B2TXG4|DCYD_SHIB3 D-cysteine desulfhydrase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=dcyD PE=3 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|A8A1C2|DCYD_ECOHS D-cysteine desulfhydrase OS=Escherichia coli O9:H4 (strain HS)
GN=dcyD PE=3 SV=1
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G+++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARFEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7M363|DCYD_ECO8A D-cysteine desulfhydrase OS=Escherichia coli O8 (strain IAI1)
GN=dcyD PE=3 SV=1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIGGISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q3Z2U3|DCYD_SHISS D-cysteine desulfhydrase OS=Shigella sonnei (strain Ss046) GN=dcyD
PE=3 SV=1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + E + VK +A G++LDPVY+GKA G++ ++Q K EG +LF+HTGG
Sbjct: 260 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIGCISQKRFKDEG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5XPW3|DCYD_KLEP3 D-cysteine desulfhydrase OS=Klebsiella pneumoniae (strain 342)
GN=dcyD PE=3 SV=1
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY E + VK +A G++LDPVY+GKA G+++ + Q K EG +LFVHTGG
Sbjct: 260 GYGTPNEEGMAAVKLLAQLEGILLDPVYTGKAMAGLIDGITQKRFKDEG-PILFVHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B7LP46|DCYD_ESCF3 D-cysteine desulfhydrase OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=dcyD PE=3 SV=1
Length = 328
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY E + VK +A G++LDPVY+GKA G+++ ++Q K +G +LF+HTGG
Sbjct: 260 GYGTPNEEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDQG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|A8GFZ8|DCYD_SERP5 D-cysteine desulfhydrase OS=Serratia proteamaculans (strain 568)
GN=dcyD PE=3 SV=1
Length = 330
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E L ++ +A GV+LDPVYSGKA G+++ +AQ + +G +LF+HTGG
Sbjct: 263 YGMPNEEGLAAIQLLAQQEGVLLDPVYSGKAMAGLIDGVAQQRFRDDG-PILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
>sp|A6TB69|DCYD_KLEP7 D-cysteine desulfhydrase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=dcyD PE=3 SV=1
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A G++LDPVY+GKA G+++ + Q K EG +LFVHTGG
Sbjct: 260 GYGTPNEDGMAAVKLLAQLEGILLDPVYTGKAMAGLIDGITQKRFKDEG-PILFVHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q57N48|DCYD_SALCH D-cysteine desulfhydrase OS=Salmonella choleraesuis (strain SC-B67)
GN=dcyD PE=3 SV=1
Length = 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|C0Q2A0|DCYD_SALPC D-cysteine desulfhydrase OS=Salmonella paratyphi C (strain RKS4594)
GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B4SW60|DCYD_SALNS D-cysteine desulfhydrase OS=Salmonella newport (strain SL254)
GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B4T849|DCYD_SALHS D-cysteine desulfhydrase OS=Salmonella heidelberg (strain SL476)
GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5R890|DCYD_SALG2 D-cysteine desulfhydrase OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5R104|DCYD_SALEP D-cysteine desulfhydrase OS=Salmonella enteritidis PT4 (strain
P125109) GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5FRX8|DCYD_SALDC D-cysteine desulfhydrase OS=Salmonella dublin (strain CT_02021853)
GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5F2T4|DCYD_SALA4 D-cysteine desulfhydrase OS=Salmonella agona (strain SL483) GN=dcyD
PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B4TYX4|DCYD_SALSV D-cysteine desulfhydrase OS=Salmonella schwarzengrund (strain
CVM19633) GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|B5BGB4|DCYD_SALPK D-cysteine desulfhydrase OS=Salmonella paratyphi A (strain
AKU_12601) GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q5PI07|DCYD_SALPA D-cysteine desulfhydrase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=dcyD PE=3 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q8ZNT7|DCYD_SALTY D-cysteine desulfhydrase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=dcyD PE=1 SV=3
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|Q5LL69|CUYA_RUEPO L-cysteate sulfo-lyase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=cuyA PE=1 SV=1
Length = 339
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 21 GLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTG 80
G GY I T L ++ A ++LDPVYS K A G + D+ + +G +V+F+HTG
Sbjct: 261 GEGYGIPTESGLEAIRMFAELEAILLDPVYSAKGAAGFI-DLIRKGHFKKGERVVFLHTG 319
Query: 81 GLLGLF 86
G + LF
Sbjct: 320 GAVALF 325
>sp|Q8Z5S9|DCYD_SALTI D-cysteine desulfhydrase OS=Salmonella typhi GN=dcyD PE=3 SV=3
Length = 328
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A GV+LDPVY+GKA G+++ ++Q +G +LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLANLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|A9MU62|DCYD_SALPB D-cysteine desulfhydrase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=dcyD PE=3 SV=1
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82
GY + + VK +A+ GV+LDPVY+GKA G+++ ++Q +G LF+HTGG
Sbjct: 260 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPS-LFIHTGGA 318
Query: 83 LGLF 86
LF
Sbjct: 319 PALF 322
>sp|A4TK60|DCYD_YERPP D-cysteine desulfhydrase OS=Yersinia pestis (strain Pestoides F)
GN=dcyD PE=3 SV=1
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E + +K +A G++LDPVY+GKA G+L+ + Q K + +LF+HTGG
Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQ-KFCDKGPILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
>sp|Q1CHC4|DCYD_YERPN D-cysteine desulfhydrase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=dcyD PE=3 SV=1
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E + +K +A G++LDPVY+GKA G+L+ + Q K + +LF+HTGG
Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQ-KFCDKGPILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
>sp|Q8ZF73|DCYD_YERPE D-cysteine desulfhydrase OS=Yersinia pestis GN=dcyD PE=3 SV=1
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E + +K +A G++LDPVY+GKA G+L+ + Q K + +LF+HTGG
Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQ-KFCDKGPILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
>sp|Q66BQ4|DCYD_YERPS D-cysteine desulfhydrase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=dcyD PE=3 SV=1
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E + +K +A G++LDPVY+GKA G+L+ + Q K + +LF+HTGG
Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQ-KFCDKGPILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
>sp|A7FJ17|DCYD_YERP3 D-cysteine desulfhydrase OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=dcyD PE=3 SV=1
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E + +K +A G++LDPVY+GKA G+L+ + Q K + +LF+HTGG
Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQ-KFCDKGPILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
>sp|A1JSN4|DCYD_YERE8 D-cysteine desulfhydrase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=dcyD PE=3 SV=1
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83
Y + E L + +A G++LDPVY+GKA G+L+ + Q + +G +LF+HTGG
Sbjct: 263 YGMPNEEGLAAIGLLARLEGILLDPVYTGKAMAGLLDGLEQKKFRDDG-PILFIHTGGAP 321
Query: 84 GLF 86
LF
Sbjct: 322 ALF 324
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,578,194
Number of Sequences: 539616
Number of extensions: 1798425
Number of successful extensions: 4466
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4262
Number of HSP's gapped (non-prelim): 134
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)