Query 039995
Match_columns 118
No_of_seqs 132 out of 686
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 05:59:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039995.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039995hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tyza_ c.79.1.1 (A:) 1-aminoc 99.8 4E-20 2.9E-24 137.1 8.9 82 11-93 255-336 (338)
2 d1f2da_ c.79.1.1 (A:) 1-aminoc 99.8 2E-19 1.5E-23 134.1 8.0 80 13-93 258-337 (341)
3 d1j0aa_ c.79.1.1 (A:) 1-aminoc 99.7 2.6E-18 1.9E-22 130.0 7.5 79 15-96 247-325 (325)
4 d1tdja1 c.79.1.1 (A:5-335) Thr 98.6 1.3E-08 9.4E-13 78.5 5.4 72 12-86 247-318 (331)
5 d1v7ca_ c.79.1.1 (A:) Threonin 98.6 1.9E-08 1.4E-12 76.9 6.0 68 12-81 252-319 (351)
6 d1v71a1 c.79.1.1 (A:6-323) Hyp 98.4 8.4E-08 6.1E-12 72.8 4.9 68 11-83 240-307 (318)
7 d1p5ja_ c.79.1.1 (A:) L-serine 98.1 2.1E-06 1.5E-10 65.1 5.5 70 11-81 228-302 (319)
8 d1v8za1 c.79.1.1 (A:1-386) Try 97.9 6.6E-06 4.8E-10 64.4 5.9 58 24-85 320-378 (386)
9 d1e5xa_ c.79.1.1 (A:) Threonin 97.5 5.6E-05 4.1E-09 61.2 6.0 63 16-81 363-425 (477)
10 d1ve1a1 c.79.1.1 (A:1-302) O-a 97.5 4.5E-05 3.3E-09 57.3 5.0 64 15-82 229-292 (302)
11 d1ve5a1 c.79.1.1 (A:2-311) Thr 97.4 7.6E-05 5.5E-09 55.8 5.1 63 14-82 243-305 (310)
12 d2bhsa1 c.79.1.1 (A:2-293) O-a 97.0 0.00061 4.4E-08 50.6 6.4 56 22-82 227-282 (292)
13 d1fcja_ c.79.1.1 (A:) O-acetyl 96.5 0.0012 8.8E-08 48.8 4.7 58 20-80 243-300 (302)
14 d1o58a_ c.79.1.1 (A:) O-acetyl 96.5 0.0025 1.8E-07 47.6 6.3 56 23-82 231-286 (293)
15 d1wkva1 c.79.1.1 (A:2-383) O-a 96.1 0.0037 2.7E-07 49.5 5.6 55 26-82 317-371 (382)
16 d1jbqa_ c.79.1.1 (A:) Cystathi 95.9 0.0065 4.7E-07 46.6 6.2 58 20-81 278-335 (355)
17 d1z7wa1 c.79.1.1 (A:3-322) O-a 95.0 0.018 1.3E-06 43.4 5.5 56 23-81 241-296 (320)
18 d1qopb_ c.79.1.1 (B:) Tryptoph 94.6 0.029 2.1E-06 43.8 5.9 58 24-86 324-384 (390)
19 d1y7la1 c.79.1.1 (A:2-311) O-a 93.2 0.072 5.3E-06 39.5 5.6 55 24-81 246-300 (310)
20 d1vb3a1 c.79.1.1 (A:1-428) Thr 70.8 6.2 0.00045 30.9 7.2 59 16-81 320-378 (428)
21 d1lbua1 a.20.1.1 (A:1-83) Zn2+ 59.6 7.7 0.00056 23.2 4.6 38 25-63 40-77 (83)
22 d1hnja2 c.95.1.2 (A:175-317) K 54.5 18 0.0013 23.3 6.2 55 27-82 69-133 (143)
23 d1o22a_ d.238.1.1 (A:) Hypothe 54.2 5 0.00036 27.3 3.2 27 25-51 10-36 (149)
24 d1ub7a2 c.95.1.2 (A:174-322) K 53.0 11 0.0008 24.6 4.9 52 29-81 74-135 (149)
25 d1gkub1 c.37.1.16 (B:1-250) He 45.6 5.6 0.00041 27.1 2.4 59 16-77 33-92 (237)
26 d1mzja2 c.95.1.2 (A:184-336) P 45.0 19 0.0014 23.6 5.0 53 30-83 76-139 (153)
27 d1agxa_ c.88.1.1 (A:) Glutamin 37.3 6.5 0.00047 29.2 1.7 13 72-84 2-14 (331)
28 d2ocda1 c.88.1.1 (A:2-337) Asp 37.1 7.2 0.00053 29.1 2.0 15 72-86 3-17 (336)
29 d1wp9a1 c.37.1.19 (A:1-200) pu 37.0 5.5 0.0004 25.9 1.1 33 27-59 10-42 (200)
30 d1wsaa_ c.88.1.1 (A:) Asparagi 35.6 7.6 0.00055 28.9 1.9 14 72-85 2-15 (328)
31 d1xpma2 c.95.1.2 (A:168-388) 3 34.3 16 0.0012 25.8 3.5 36 46-82 106-142 (221)
32 d1qtwa_ c.1.15.1 (A:) Endonucl 31.1 53 0.0039 21.9 5.8 61 27-89 44-120 (285)
33 d1m6sa_ c.67.1.1 (A:) Low-spec 29.7 40 0.0029 22.1 4.8 11 26-36 11-21 (343)
34 d2d6fa2 c.88.1.1 (A:84-435) Gl 29.3 11 0.0008 28.3 1.8 15 71-85 7-21 (352)
35 d1u6ea2 c.95.1.2 (A:175-317) K 29.2 46 0.0033 21.4 4.9 50 31-81 77-137 (148)
36 d2p6ra3 c.37.1.19 (A:1-202) He 29.0 5.7 0.00042 26.3 0.1 54 21-77 20-74 (202)
37 d1nnsa_ c.88.1.1 (A:) Asparagi 28.1 11 0.00079 28.0 1.6 14 72-85 2-15 (326)
38 d2esra1 c.66.1.46 (A:28-179) P 27.6 12 0.00086 24.1 1.5 35 44-79 87-121 (152)
39 d2evea1 b.122.1.8 (A:2-149) Hy 26.2 17 0.0012 24.7 2.2 19 70-88 42-61 (148)
40 d2ar1a1 b.122.1.8 (A:7-163) Hy 25.1 20 0.0014 24.4 2.4 17 69-85 46-63 (157)
41 d1hkha_ c.69.1.12 (A:) Gamma-l 24.2 25 0.0018 22.3 2.7 9 70-78 22-30 (279)
42 d1yt3a2 a.60.8.3 (A:295-375) R 24.0 25 0.0018 20.9 2.6 41 21-61 6-46 (81)
43 d1o7ja_ c.88.1.1 (A:) Asparagi 23.7 15 0.0011 27.1 1.6 14 72-85 3-16 (325)
44 d1b7ba_ c.73.1.1 (A:) Carbamat 23.5 13 0.00092 26.3 1.1 14 70-83 40-53 (307)
45 d1xtta1 c.61.1.1 (A:2-216) Ura 22.9 31 0.0023 24.0 3.2 53 43-105 135-188 (215)
46 d4pgaa_ c.88.1.1 (A:) Glutamin 22.8 15 0.0011 27.2 1.6 14 72-85 3-16 (330)
47 d1kl7a_ c.79.1.1 (A:) Threonin 22.3 70 0.0051 25.2 5.6 57 21-80 389-449 (511)
48 d1zq1a2 c.88.1.1 (A:76-438) Gl 21.6 19 0.0014 27.2 1.8 14 72-85 17-30 (363)
49 d1to0a_ c.116.1.3 (A:) Hypothe 21.5 37 0.0027 22.1 3.2 38 44-86 74-114 (157)
50 d2hc5a1 d.352.1.1 (A:1-109) Hy 21.4 12 0.00086 23.9 0.5 22 26-47 85-106 (109)
51 d1e19a_ c.73.1.1 (A:) Carbamat 21.1 14 0.001 26.5 1.0 13 70-82 42-54 (313)
52 d1xkla_ c.69.1.20 (A:) Salicyl 21.0 22 0.0016 21.7 1.8 12 71-82 2-13 (258)
53 d1v7pc_ c.62.1.1 (C:) Integrin 20.7 36 0.0026 21.9 3.0 53 28-83 61-115 (193)
54 d1c7na_ c.67.1.3 (A:) Cystalys 20.6 78 0.0057 22.4 5.2 26 23-48 63-89 (394)
55 d1ehya_ c.69.1.11 (A:) Bacteri 20.6 42 0.0031 21.2 3.3 10 70-79 27-36 (293)
56 d1k92a1 c.26.2.1 (A:1-188) Arg 20.1 25 0.0018 21.3 2.0 17 68-84 7-23 (188)
No 1
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]}
Probab=99.80 E-value=4e-20 Score=137.08 Aligned_cols=82 Identities=28% Similarity=0.397 Sum_probs=73.8
Q ss_pred hhhhhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCcccccccHH
Q 039995 11 LMTRQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLFDKVD 90 (118)
Q Consensus 11 ~~~~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf~~~~ 90 (118)
..+..+.++++++|+.+++|.++++++++++|||++||+|||++++++.+ +.+++.++++++||+|||||++|+|+|.+
T Consensus 255 ~~~~~~~~~~~~~~~v~d~ei~~a~~~l~~~eGI~~eP~~s~~a~a~l~~-~~~~~~~~~g~~Vv~i~TGG~~~~~~y~~ 333 (338)
T d1tyza_ 255 ADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIE-MVRNGEFPEGSRVLYAHLGGVPALNGYSF 333 (338)
T ss_dssp GGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHH-HHHTTCSCTTCEEEEEECCCGGGGGGGTG
T ss_pred hhhhhhhhcccceEEEChHHHHHHHHHHHHHhCCcCChHHHHHHHHHHHH-HHhcCCCCCcCeEEEEECCchhhHHHHHH
Confidence 45666778899999999999999999999999999999999999999986 55567888999999999999999999876
Q ss_pred Hhh
Q 039995 91 QMA 93 (118)
Q Consensus 91 ~~~ 93 (118)
.++
T Consensus 334 ~~~ 336 (338)
T d1tyza_ 334 IFR 336 (338)
T ss_dssp GGT
T ss_pred HHh
Confidence 654
No 2
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]}
Probab=99.78 E-value=2e-19 Score=134.11 Aligned_cols=80 Identities=24% Similarity=0.351 Sum_probs=71.9
Q ss_pred hhhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCcccccccHHHh
Q 039995 13 TRQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLFDKVDQM 92 (118)
Q Consensus 13 ~~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf~~~~~~ 92 (118)
+.+++++.+.+|+.+++|..++++.++++|||++||+||||++++|.+ +.+.+.++++++||||||||.+++++|.+.+
T Consensus 258 ~~~~~~~~~~~~~v~d~e~~~a~~~la~~eGI~veP~ys~~a~agl~~-l~~~~~i~~~~~Vv~i~TGG~~~~~~~~~~~ 336 (341)
T d1f2da_ 258 FTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIA-LIKEDYFKPGANVLYVHLGGAPALSAYSSFF 336 (341)
T ss_dssp CCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHH-HHHTTCSCTTCEEEEEECCCGGGGGGGGGGC
T ss_pred cccccccceeEEEEChHHHHHHHHHHHHHhCcccChhhhHHHHHHHHH-HHHcCCCCCcCeEEEEECCCcccHHHHHHHh
Confidence 456677889999999999999999999999999999999999999986 5555688889999999999999999987766
Q ss_pred h
Q 039995 93 A 93 (118)
Q Consensus 93 ~ 93 (118)
.
T Consensus 337 ~ 337 (341)
T d1f2da_ 337 P 337 (341)
T ss_dssp C
T ss_pred c
Confidence 4
No 3
>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.73 E-value=2.6e-18 Score=129.96 Aligned_cols=79 Identities=34% Similarity=0.590 Sum_probs=69.7
Q ss_pred hhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCcccccccHHHhhH
Q 039995 15 QPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLFDKVDQMAP 94 (118)
Q Consensus 15 ~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf~~~~~~~~ 94 (118)
...++++++|+++++|..++++.++++|||++||+|||++++++.+.+++ +.+ ++|||+|||||++|+|++.+++.+
T Consensus 247 ~~~~~~~~~~~v~d~e~~~a~~~l~~~eGI~~eP~~s~~a~~~l~~~~~~-~~~--~~~vv~i~tGGl~g~~~~~~~~~~ 323 (325)
T d1j0aa_ 247 ELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARK-GEL--GEKILFIHTGGISGTFHYGDKLLS 323 (325)
T ss_dssp EEEECSTTSTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHT-TCS--CSEEEEEECCCHHHHHHTHHHHHT
T ss_pred hhhhceecceeechHHHHHHHHHHHHHcCCcCChhhHHHHHHHHHHHHHc-CCC--CCeEEEEECCchHHHHHHHHHHHh
Confidence 44577899999999999999999999999999999999999999975554 444 789999999999999999988876
Q ss_pred hh
Q 039995 95 LL 96 (118)
Q Consensus 95 ~~ 96 (118)
++
T Consensus 324 ~~ 325 (325)
T d1j0aa_ 324 LL 325 (325)
T ss_dssp TC
T ss_pred hC
Confidence 53
No 4
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}
Probab=98.64 E-value=1.3e-08 Score=78.46 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=60.4
Q ss_pred hhhhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCccccc
Q 039995 12 MTRQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLF 86 (118)
Q Consensus 12 ~~~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf 86 (118)
+|..+.++.+..|..+++|..++++.++++|||++||. +|.+++|+++.+.+ +.+ +|++||+|||||--.+.
T Consensus 247 ~~~~~~~~~d~~~~V~d~e~~~a~~~la~~eGi~~eps-~~~alAal~~~~~~-~~~-~g~~Vv~vltGgnid~~ 318 (331)
T d1tdja1 247 TFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPS-GALALAGMKKYIAL-HNI-RGERLAHILSGANVNFH 318 (331)
T ss_dssp HHHHHTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHH-HHHHHHHHHHHHHH-HTC-CSCEEEEECCCCCCCTT
T ss_pred HHHHhhccCCEEEEecHHHHHHHHHHHHHHcCcEEeHH-HHHHHHHHHHHHhh-ccC-CcCeEEEEeCCCCCCcc
Confidence 45666788899999999999999999999999999996 78899999865454 455 68999999999865543
No 5
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}
Probab=98.63 E-value=1.9e-08 Score=76.91 Aligned_cols=68 Identities=22% Similarity=0.266 Sum_probs=58.7
Q ss_pred hhhhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 12 MTRQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 12 ~~~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
+.....++.+.-+..++++..++++.++++|||.+||. ||.+++|+++ +.++++++++++||+++||+
T Consensus 252 ~~~~~~~~~~~~~~V~d~ea~~a~~~l~~~eGi~v~ps-sg~alAa~~~-~~~~~~~~~~~~VV~i~tg~ 319 (351)
T d1v7ca_ 252 AVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPA-SAAAMAGVFK-LLREGRLEPESTVVLTLTGH 319 (351)
T ss_dssp HHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHH-HHHHHHHHHH-HHHTTCSCSSEEEEEEECBB
T ss_pred hhhhhhccCcEEEEEchHHHHHHHHHHHHHcCcEECHH-HHHHHHHHHH-HHHhCCCCCCCeEEEEeCCC
Confidence 34445566677788999999999999999999999999 9999999996 56667888899999999995
No 6
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.44 E-value=8.4e-08 Score=72.81 Aligned_cols=68 Identities=13% Similarity=0.143 Sum_probs=58.1
Q ss_pred hhhhhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCcc
Q 039995 11 LMTRQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83 (118)
Q Consensus 11 ~~~~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~ 83 (118)
+.+.++.++.+..|..+++|..++++.++++|||++||. +|.++++++. +++. . ++++||+++|||-.
T Consensus 240 ~~~~~~~~~~~~~~~v~d~e~~~a~~~la~~egi~~eps-~a~~lAa~~~-~~~~--~-~~~~Vv~il~GGN~ 307 (318)
T d1v71a1 240 YTFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPT-GCLSFAAARA-MKEK--L-KNKRIGIIISGGNV 307 (318)
T ss_dssp HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGG-GGHHHHHHHH-TGGG--G-TTCEEEEEECBCCC
T ss_pred HHHHHHHhccCceeeECHHHHHHHHHHHHHHcCcEEeHH-HHHHHHHHHH-hHHH--c-CCCcEEEEeCCCCC
Confidence 456677788899999999999999999999999999997 7899999875 5543 2 58899999999843
No 7
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.07 E-value=2.1e-06 Score=65.08 Aligned_cols=70 Identities=10% Similarity=0.170 Sum_probs=56.0
Q ss_pred hhhhhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHH-----HhCCCCCCCCeEEEEecCC
Q 039995 11 LMTRQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDM-----AQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 11 ~~~~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l-----~~~g~~~~g~rVLfiHTGG 81 (118)
.++..+.++.+..+..+++|.+++++.++++|||.+||. +|.+++|+++.+ .++....++++||.+++||
T Consensus 228 ~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps-sa~~~aal~~~~~~~~~~~~~~~~~~~~vVvv~~~G 302 (319)
T d1p5ja_ 228 QALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPA-CGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGG 302 (319)
T ss_dssp HHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHH-HHHHHHHHHTTHHHHHHHTTSSCSSCSCEEEECCBC
T ss_pred ccchhhhhccceeeecCHHHHHHHHHHHHHHcCEEEeHH-HHHHHHHHHHHHHHHHHHhccccCCCCCEEEEEcCC
Confidence 345666777788889999999999999999999999999 899999987422 2333344677899999877
No 8
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.91 E-value=6.6e-06 Score=64.36 Aligned_cols=58 Identities=16% Similarity=0.237 Sum_probs=48.9
Q ss_pred cccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecC-Ccccc
Q 039995 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTG-GLLGL 85 (118)
Q Consensus 24 YG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTG-Gl~gl 85 (118)
...+++|.++++++++++|||+.+| -+|-+++++++ +.+ .+.++++||++.|| |+--+
T Consensus 320 v~VtD~E~~~a~~~La~~EGI~~~~-~sa~alA~a~k-la~--~~~~~~~VV~iltG~G~kD~ 378 (386)
T d1v8za1 320 VTVTDEEALKAFHELSRTEGIIPAL-ESAHAVAYAMK-LAK--EMSRDEIIIVNLSGRGDKDL 378 (386)
T ss_dssp EEEEHHHHHHHHHHHHHHHSCCBCH-HHHHHHHHHHH-HHH--TSCTTCEEEEEECBBSGGGH
T ss_pred EEECHHHHHHHHHHHHHhcCCeecc-HHHHHHHHHHH-HHH--HcCCCCEEEEEeCCCccccH
Confidence 3467788999999999999999999 78999999986 544 36789999999999 76543
No 9
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.53 E-value=5.6e-05 Score=61.18 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=50.1
Q ss_pred hccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 16 PRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 16 l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
+.+..|.-...+++|..++++. ++++||++|| .||-+++|+.+ +++.+.+.++++||.+.||-
T Consensus 363 ~~~~~g~~~~VsDeei~~a~~l-~~~eGi~veP-ssA~alAal~k-l~~~g~i~~~~~VVvl~Tg~ 425 (477)
T d1e5xa_ 363 LKKCNGIVEEATEEELMDAMAQ-ADSTGMFICP-HTGVALTALFK-LRNQGVIAPTDRTVVVSTAH 425 (477)
T ss_dssp HHHTTCEEEEECHHHHHHHHHH-HHHTTCCCCH-HHHHHHHHHHH-HHHTTSSCTTCCEEEEECBC
T ss_pred HhhcCceEEecCHHHHHHHHHH-HHHCCcEECh-HHHHHHHHHHH-HHHhCCCCCCCcEEEEeCcC
Confidence 3333344455778888888875 6889999999 69999999986 66667888999999999985
No 10
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}
Probab=97.53 E-value=4.5e-05 Score=57.27 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=51.9
Q ss_pred hhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCc
Q 039995 15 QPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82 (118)
Q Consensus 15 ~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl 82 (118)
...++....+-.+++|.+++++.+++++||+++| .+|.+++++++...+ +.++++||+|-|||-
T Consensus 229 ~~~~~~~~~~~V~d~ea~~a~~~l~~~eGi~v~~-ssgaa~aaal~~~~~---~~~~~~Vv~i~~g~G 292 (302)
T d1ve1a1 229 LDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGM-SSGGIVWAALQVARE---LGPGKRVACISPDGG 292 (302)
T ss_dssp CCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCH-HHHHHHHHHHHHHHH---HCTTCEEEEEECBBS
T ss_pred hhhhcceeeeecCHHHHHHHHHHHHHHcCCEEec-cHHHHHHHHHHHhHH---hCccCeEEEEECCCC
Confidence 3445556667788899999999999999999999 689999999864433 457899999999873
No 11
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]}
Probab=97.42 E-value=7.6e-05 Score=55.83 Aligned_cols=63 Identities=13% Similarity=0.103 Sum_probs=50.5
Q ss_pred hhhccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCc
Q 039995 14 RQPRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82 (118)
Q Consensus 14 ~~l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl 82 (118)
..+.+..+..+..+++|..++++.++++|||.++|. +|=+++++++ +.+ + .+++||.+-|||=
T Consensus 243 ~~~~~~~d~~v~V~d~e~~~a~~~La~~eGi~veps-saa~lAa~~~-~~~--~--~~~~Vvvvl~GgN 305 (310)
T d1ve5a1 243 PILRERVDGILTVSEEALLEAERLLFTRTKQVVEPT-GALPLAAVLE-HGA--R--LPQTLALLLSGGN 305 (310)
T ss_dssp HHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGG-GGHHHHHHHH-HGG--G--SCSEEEEEECBCC
T ss_pred HHhcccCCeEEEECHHHHHHHHHHHHHHcCCEEcHH-HHHHHHHHHH-hhH--h--cCCCEEEEeCCCC
Confidence 344455667788899999999999999999999996 6778999875 433 2 2579999999984
No 12
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}
Probab=97.03 E-value=0.00061 Score=50.62 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=46.2
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCc
Q 039995 22 LGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82 (118)
Q Consensus 22 ~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl 82 (118)
.-+-.++++..+++++++++|||+++|. +|-+++++++ +.+.+ ++++||+|-||+-
T Consensus 227 ~~~~v~d~ea~~a~~~L~~~eGi~vepS-sgaalaa~~~-~~~~~---~~~~VV~il~~~G 282 (292)
T d2bhsa1 227 EVLDIHQRDAENTMRELAVREGIFCGVS-SGGAVAGALR-VAKAN---PDAVVVAIICDRG 282 (292)
T ss_dssp EEEEECHHHHHHHHHHHHHHHCCCBCHH-HHHHHHHHHH-HHHTC---TTCEEEEEECBBS
T ss_pred eEEEcCHHHHHHHHHHHHHHcCeEEeHH-HHHHHHHHHH-HHHHC---cCCeEEEEECCCC
Confidence 3355778889999999999999999998 8999999986 44433 5789999988764
No 13
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}
Probab=96.55 E-value=0.0012 Score=48.82 Aligned_cols=58 Identities=12% Similarity=0.233 Sum_probs=46.1
Q ss_pred cCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecC
Q 039995 20 KGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTG 80 (118)
Q Consensus 20 ~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTG 80 (118)
...-+-.+++|..++++.+++++||..||. +|-+++++++ +.+.... ++++||+|=+|
T Consensus 243 ~d~~~~Vsd~ea~~a~~~l~~~~gi~~eps-saa~laaa~~-l~~~~~~-~~~~vvvilc~ 300 (302)
T d1fcja_ 243 IDKVVGITNEEAISTARRLMEEEGILAGIS-SGAAVAAALK-LQEDESF-TNKNIVVILPS 300 (302)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHH-HTTSGGG-TTCCEEEEECB
T ss_pred CcEEEEECHHHHHHHHHHHHHHcCCEEcHH-HHHHHHHHHH-HHHhcCC-CcCeEEEEeCC
Confidence 344566778889999999999999999998 7889999985 5543333 57899998776
No 14
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}
Probab=96.50 E-value=0.0025 Score=47.56 Aligned_cols=56 Identities=20% Similarity=0.234 Sum_probs=46.9
Q ss_pred CcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCc
Q 039995 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82 (118)
Q Consensus 23 GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl 82 (118)
-+-.+++|..++++.+++++||..+|. +|-+++++++ +.+ ++.++++||+|-||+.
T Consensus 231 ~v~v~d~e~~~a~~~l~~~eGi~~eps-saa~~aa~~~-~a~--~~~~~~~Vv~i~~d~g 286 (293)
T d1o58a_ 231 VITVEDEEAYEMARYLAKKEGLLVGIS-SGANVAAALK-VAQ--KLGPDARVVTVAPDHA 286 (293)
T ss_dssp EEEECHHHHHHHHHHHHHHHCCCBCHH-HHHHHHHHHH-HHH--TSCTTCCEEEEECBBG
T ss_pred EEEECHHHHHHHHHHHHHHcCCEEeHH-HHHHHHHHHH-HHH--HcCCcCEEEEEECCCC
Confidence 466788999999999999999999998 6889999986 544 3667899999988753
No 15
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=96.11 E-value=0.0037 Score=49.54 Aligned_cols=55 Identities=24% Similarity=0.378 Sum_probs=43.2
Q ss_pred cCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCc
Q 039995 26 INTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82 (118)
Q Consensus 26 ~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl 82 (118)
.+++|.++++++++++|||+.+|- +|-+++++++ +.+.+.+.+++.|+.++.+|.
T Consensus 317 Vsd~Eai~a~r~La~~EGI~vgpS-SGaavaaa~k-~a~~~~~~~~~vVvIlcD~G~ 371 (382)
T d1wkva1 317 VTLEEAMEAVVEVARSDGLVIGPS-GGAAVKALAK-KAAEGDLEPGDYVVVVPDTGF 371 (382)
T ss_dssp ECHHHHHHHHHHHHHHHSCCBCHH-HHHHHHHHHH-HHHTTCSCSEEEEEEECBBGG
T ss_pred ECHHHHHHHHHHHHHHcCCEEcHH-HHHHHHHHHH-HHhhccCCCCCEEEEECCCCc
Confidence 456778999999999999999997 6889999886 444456766666677777774
No 16
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.94 E-value=0.0065 Score=46.63 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=46.2
Q ss_pred cCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 20 KGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 20 ~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
...-+..+++|..++++.+++++||+++|. +|-+++++++ +.+ ++.++++||.|=+++
T Consensus 278 ~~~~~~v~D~ea~~~~~~L~~~eGi~vepS-saa~laa~l~-~~~--~~~~g~~VVvvlcd~ 335 (355)
T d1jbqa_ 278 VDKWFKSNDEEAFTFARMLIAQEGLLCGGS-AGSTVAVAVK-AAQ--ELQEGQRCVVILPDS 335 (355)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSCCCBCHH-HHHHHHHHHH-HGG--GCCTTCEEEEEECBB
T ss_pred eeeeccCCHHHHHHHHHHHHHHhCcEEeHH-HHHHHHHHHH-HHH--hcCCcCEEEEEECCC
Confidence 344456778899999999999999999997 6889999986 544 356789998877653
No 17
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=94.98 E-value=0.018 Score=43.39 Aligned_cols=56 Identities=20% Similarity=0.361 Sum_probs=44.7
Q ss_pred CcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 23 GYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 23 GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
-+..++.|..++++.++++|||+++|- +|-++++.++ +.+.. ..++++||.|=+++
T Consensus 241 ~~~V~d~e~~~a~~~l~~~eGi~ve~s-sga~~aaa~k-~a~~~-~~~~~~VV~i~~d~ 296 (320)
T d1z7wa1 241 VVQVSSDESIDMARQLALKEGLLVGIS-SGAAAAAAIK-LAQRP-ENAGKLFVAIFPSF 296 (320)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCBCHH-HHHHHHHHHH-HHTSG-GGTTCEEEEEECBB
T ss_pred eeccCHHHHHHHHHHHHHHCCEEEehH-HHHHHHHHHH-HHhhc-cCCCCEEEEEECCC
Confidence 356778899999999999999999998 6888999885 44432 24688999887754
No 18
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=94.55 E-value=0.029 Score=43.81 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=42.0
Q ss_pred cccCCHHHHHHHHHHHHHhCCcc--chhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecC-Cccccc
Q 039995 24 YAINTSEELNFVKDIAAATGVVL--DPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTG-GLLGLF 86 (118)
Q Consensus 24 YG~~t~e~~~~I~~~a~~eGI~L--DPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTG-Gl~glf 86 (118)
...+++|.+++++.+++.|||+. +|- =++++.++...+. ..+++.||++-|| |.--+.
T Consensus 324 ~~vtD~Ea~~a~~~La~~EGI~~a~Esa---~Ava~Ai~~a~~~--~~~~~~VVv~lsG~G~kD~~ 384 (390)
T d1qopb_ 324 VSITDDEALEAFKTLCRHEGIIPALESS---HALAHALKMMREQ--PEKEQLLVVNLSGRGDKDIF 384 (390)
T ss_dssp EEEEHHHHHHHHHHHHHHHSCCBCHHHH---HHHHHHHHHHHHS--TTSCEEEEEEECBBCGGGHH
T ss_pred EEECHHHHHHHHHHHHHhcCCeecCchH---HHHHHHHHHhhhc--CCCCCEEEEEECCCCccCHH
Confidence 34667899999999999999994 553 3677666544442 3457788888899 876543
No 19
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}
Probab=93.19 E-value=0.072 Score=39.46 Aligned_cols=55 Identities=15% Similarity=0.257 Sum_probs=41.0
Q ss_pred cccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 24 YAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 24 YG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
.-.+++|.+++++.+++++||..+|- +|=+++++++ +.+.+.. ++++||.|-+++
T Consensus 246 ~~v~d~ea~~~~~~l~~~eGi~veps-saa~laaa~~-~a~~~~~-~~~~vV~vlcd~ 300 (310)
T d1y7la1 246 ETVDSDTALATARRLMAEEGILAGIS-SGAAVAAADR-LAKLPEF-ADKLIVVILPSA 300 (310)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCBCHH-HHHHHHHHHH-HHTSGGG-TTCEEEEEECBB
T ss_pred ccCCHHHHHHHHHHHHHHcCCEEeHH-HHHHHHHHHH-HHhhccC-CcCEEEEEECCC
Confidence 44556778999999999999999998 4668888875 5544334 578888775443
No 20
>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}
Probab=70.75 E-value=6.2 Score=30.92 Aligned_cols=59 Identities=22% Similarity=0.166 Sum_probs=42.6
Q ss_pred hccccCCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 16 PRLSKGLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 16 l~~~~g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
+......++...++|..+.|+...+++|+++||= ||=++.++.+ ...++..+|++=|+-
T Consensus 320 ~~~l~~~~~~~~dde~~~~i~~~~~~~gyi~DPH-TAvg~~a~~~------~~~~~~~~V~LaTAH 378 (428)
T d1vb3a1 320 IWQLKELGYAAVDDETTQQTMRELKELGYTSEPH-AAVAYRALRD------QLNPGEYGLFLGTAH 378 (428)
T ss_dssp TCCGGGSEEEECCHHHHHHHHHHHHHTTCCCCHH-HHHHHHHHHT------TCCTTCEEEEEECBC
T ss_pred hhhhcccceeeccHHHHHHHHHHHHHcCceeCCc-HHHHHHHHHH------hhCCCCCEEEEECcC
Confidence 3333455677889999999999999999999994 6767766542 223466778886664
No 21
>d1lbua1 a.20.1.1 (A:1-83) Zn2+ DD-carboxypeptidase, N-terminal domain {Streptomyces albus G [TaxId: 1962]}
Probab=59.60 E-value=7.7 Score=23.15 Aligned_cols=38 Identities=11% Similarity=0.075 Sum_probs=32.5
Q ss_pred ccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHH
Q 039995 25 AINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMA 63 (118)
Q Consensus 25 G~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~ 63 (118)
|..++++.++++.|-+..|+..|-+-.-.++..|.+ +.
T Consensus 40 g~fg~~t~~AV~~FQ~~~gL~~dGivg~~T~~~L~~-~~ 77 (83)
T d1lbua1 40 GQFGPATKAAVQRFQSAYGLAADGIAGPATFNKIYQ-LQ 77 (83)
T ss_dssp SBCCHHHHHHHHHHHHHTTSCCSSCBCHHHHHHHHH-HB
T ss_pred CccCHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHH-Hh
Confidence 468899999999999999999999988888877763 54
No 22
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=54.54 E-value=18 Score=23.33 Aligned_cols=55 Identities=18% Similarity=0.261 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHHhCCccchhhh----------HHHHHHHHHHHHhCCCCCCCCeEEEEecCCc
Q 039995 27 NTSEELNFVKDIAAATGVVLDPVYS----------GKAAYGMLNDMAQNPKKWEGRKVLFVHTGGL 82 (118)
Q Consensus 27 ~t~e~~~~I~~~a~~eGI~LDPVYT----------gKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl 82 (118)
+.+.....++.+++.-|++.|.+++ +=...+|. +..+++++.+|.+|+++-.|.-
T Consensus 69 ~Hq~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~-~~~~~~~~~~Gd~vll~g~G~G 133 (143)
T d1hnja2 69 PHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALD-EAVRDGRIKPGQLVLLEAFGGG 133 (143)
T ss_dssp ECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHH-HHHHTTCSCTTCEEEEEEEETT
T ss_pred eccCchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHH-HHHHhCCCCCCCEEEEEEEehh
Confidence 3444556777778888999888764 44455654 4556678889999999988853
No 23
>d1o22a_ d.238.1.1 (A:) Hypothetical protein TM0875 {Thermotoga maritima [TaxId: 2336]}
Probab=54.22 E-value=5 Score=27.30 Aligned_cols=27 Identities=33% Similarity=0.318 Sum_probs=23.3
Q ss_pred ccCCHHHHHHHHHHHHHhCCccchhhh
Q 039995 25 AINTSEELNFVKDIAAATGVVLDPVYS 51 (118)
Q Consensus 25 G~~t~e~~~~I~~~a~~eGI~LDPVYT 51 (118)
|+-+..+.+-|+++-+++||.||||-+
T Consensus 10 ~k~~~~le~k~~ei~~etgisl~~vns 36 (149)
T d1o22a_ 10 GKEFGILEKKMKEIFNETGVSLEPVNS 36 (149)
T ss_dssp TCCCHHHHHHHHHHHHHHSCCCCCCCC
T ss_pred CcchhHHHHHHHHHHHhcCceeeecch
Confidence 455667888999999999999999976
No 24
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=53.05 E-value=11 Score=24.59 Aligned_cols=52 Identities=17% Similarity=0.282 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhCCccchhhh----------HHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 29 SEELNFVKDIAAATGVVLDPVYS----------GKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 29 ~e~~~~I~~~a~~eGI~LDPVYT----------gKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
+.....++.++++-||+-|.+++ +=....|. +..+.+++.+|.+||++-.|.
T Consensus 74 qa~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~-~~~~~~~~~~Gd~vll~g~G~ 135 (149)
T d1ub7a2 74 QANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALK-EAVDAGRIREGDHVLLVSFGA 135 (149)
T ss_dssp CSCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHH-HHHHHTSSCTTCEEEEEEEET
T ss_pred ccchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHH-HHHHcCCCCCCCEEEEEEEch
Confidence 33445667777788888888664 33445554 455556888999999998884
No 25
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=45.59 E-value=5.6 Score=27.08 Aligned_cols=59 Identities=12% Similarity=0.086 Sum_probs=40.3
Q ss_pred hccccCCCcccCCHHHHHHHHHHHHH-hCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEE
Q 039995 16 PRLSKGLGYAINTSEELNFVKDIAAA-TGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFV 77 (118)
Q Consensus 16 l~~~~g~GYG~~t~e~~~~I~~~a~~-eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfi 77 (118)
+..+...++++|++--.++|..+-+- .-+..=|+=+||++.+++-.+.. ..++.++|++
T Consensus 33 ~~~~~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~---~~~~~rvliv 92 (237)
T d1gkub1 33 FVEFFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFL---ALKGKRCYVI 92 (237)
T ss_dssp HHHHHHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHH---HTTSCCEEEE
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHH---HHhcCeEEEE
Confidence 44455567889999888888776543 44777899999998876642221 1235677776
No 26
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=44.99 E-value=19 Score=23.64 Aligned_cols=53 Identities=19% Similarity=0.196 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhCCccchhhh-----------HHHHHHHHHHHHhCCCCCCCCeEEEEecCCcc
Q 039995 30 EELNFVKDIAAATGVVLDPVYS-----------GKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLL 83 (118)
Q Consensus 30 e~~~~I~~~a~~eGI~LDPVYT-----------gKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~ 83 (118)
.....++.++++-||+-|-+++ +=....|. +..+.+++.+|.+|+++-.|+-.
T Consensus 76 ~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~-~~~~~~~~~~Gd~ill~~fG~G~ 139 (153)
T d1mzja2 76 ANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALD-RLVRSGAVPGGGPALMIGFGAGL 139 (153)
T ss_dssp SCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHH-HHHHHTSSCTTCEEEEEEEETTT
T ss_pred CcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHH-HHHHcCCCCCCCEEEEEEEchhh
Confidence 3356777788888998886542 22244554 45555788899999999888543
No 27
>d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]}
Probab=37.32 E-value=6.5 Score=29.22 Aligned_cols=13 Identities=38% Similarity=0.708 Sum_probs=11.4
Q ss_pred CeEEEEecCCccc
Q 039995 72 RKVLFVHTGGLLG 84 (118)
Q Consensus 72 ~rVLfiHTGGl~g 84 (118)
+||+.|+|||..+
T Consensus 2 ~~ilvi~TGGTIa 14 (331)
T d1agxa_ 2 NNVVIVATGGTIA 14 (331)
T ss_dssp CEEEEEECBTTTS
T ss_pred CEEEEEEcCCccc
Confidence 5899999999875
No 28
>d2ocda1 c.88.1.1 (A:2-337) Asparaginase type II {Vibrio cholerae [TaxId: 666]}
Probab=37.07 E-value=7.2 Score=29.07 Aligned_cols=15 Identities=27% Similarity=0.636 Sum_probs=12.6
Q ss_pred CeEEEEecCCccccc
Q 039995 72 RKVLFVHTGGLLGLF 86 (118)
Q Consensus 72 ~rVLfiHTGGl~glf 86 (118)
+||+.|+|||..|..
T Consensus 3 ~~I~vi~TGGTIa~~ 17 (336)
T d2ocda1 3 KHIYIAYTGGTIGMK 17 (336)
T ss_dssp CEEEEEECCSGGGBC
T ss_pred CeEEEEEeCCcccee
Confidence 589999999988643
No 29
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=36.99 E-value=5.5 Score=25.94 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHHhCCccchhhhHHHHHHHH
Q 039995 27 NTSEELNFVKDIAAATGVVLDPVYSGKAAYGML 59 (118)
Q Consensus 27 ~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~ 59 (118)
|.+--.+++..+.++..|+..|+=+||++.+++
T Consensus 10 pr~~Q~~~~~~~~~~n~lv~~pTGsGKT~i~~~ 42 (200)
T d1wp9a1 10 PRIYQEVIYAKCKETNCLIVLPTGLGKTLIAMM 42 (200)
T ss_dssp CCHHHHHHHHHGGGSCEEEECCTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCeEEEeCCCCcHHHHHHH
Confidence 445555666666677889999999999986654
No 30
>d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes [TaxId: 844]}
Probab=35.58 E-value=7.6 Score=28.94 Aligned_cols=14 Identities=29% Similarity=0.430 Sum_probs=11.9
Q ss_pred CeEEEEecCCcccc
Q 039995 72 RKVLFVHTGGLLGL 85 (118)
Q Consensus 72 ~rVLfiHTGGl~gl 85 (118)
.||++|+|||..+.
T Consensus 2 pki~~i~TGGTI~~ 15 (328)
T d1wsaa_ 2 PQVTILATGGTIAG 15 (328)
T ss_dssp CEEEEEESSSCSCC
T ss_pred CEEEEEECCCcccc
Confidence 48999999998764
No 31
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}
Probab=34.32 E-value=16 Score=25.84 Aligned_cols=36 Identities=17% Similarity=0.352 Sum_probs=28.1
Q ss_pred cchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecC-Cc
Q 039995 46 LDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTG-GL 82 (118)
Q Consensus 46 LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTG-Gl 82 (118)
+=-+|||-.+.+|+..+. ++...+|+||+++==| |+
T Consensus 106 iGN~YTaSlyl~L~Sll~-~~~~~~G~rIglfSYGSG~ 142 (221)
T d1xpma2 106 VGNIYTGSLYLSLISLLE-NRDLQAGETIGLFSYGSGS 142 (221)
T ss_dssp TCCCGGGHHHHHHHHHHH-HSCCCTTCEEEEEEEETTT
T ss_pred cCCcchHHHHHHHHhhhc-cccCCCCCEEEEEEecCCc
Confidence 567999999999987554 4566689999998776 54
No 32
>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]}
Probab=31.13 E-value=53 Score=21.89 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHHhCCccc----------------hhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCcccccccH
Q 039995 27 NTSEELNFVKDIAAATGVVLD----------------PVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLFDKV 89 (118)
Q Consensus 27 ~t~e~~~~I~~~a~~eGI~LD----------------PVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf~~~ 89 (118)
.+++..+.++...+..|+.+- |----|+.-.+.+.+.....+ |.+++.+|+|....-....
T Consensus 44 ~~~~~~~~~k~~~~~~gl~~~~~~~~~p~~~n~~~~~~~~r~~s~~~~~~~i~~a~~l--G~~~vv~h~g~~~~~~~~~ 120 (285)
T d1qtwa_ 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQL--GLSLLNFHPGSHLMQISEE 120 (285)
T ss_dssp CCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHT--TCCEEEECCCBCTTTSCHH
T ss_pred CCHHHHHHHHHHHHHcCCCcceeEecCCcccccccchHHHHHHHHHHHHHHHHHHHHc--CCCceeeeceeccCcccHH
Confidence 578999999999999987433 222234444443322222123 7789999998765543333
No 33
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=29.70 E-value=40 Score=22.14 Aligned_cols=11 Identities=18% Similarity=-0.034 Sum_probs=6.4
Q ss_pred cCCHHHHHHHH
Q 039995 26 INTSEELNFVK 36 (118)
Q Consensus 26 ~~t~e~~~~I~ 36 (118)
+|+|+.+++|+
T Consensus 11 ~p~p~v~~A~~ 21 (343)
T d1m6sa_ 11 KPTEEMRKAMA 21 (343)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 45666666654
No 34
>d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=29.26 E-value=11 Score=28.27 Aligned_cols=15 Identities=27% Similarity=0.335 Sum_probs=12.6
Q ss_pred CCeEEEEecCCcccc
Q 039995 71 GRKVLFVHTGGLLGL 85 (118)
Q Consensus 71 g~rVLfiHTGGl~gl 85 (118)
=+||+.|+|||..|.
T Consensus 7 ~p~I~ii~TGGTIa~ 21 (352)
T d2d6fa2 7 LPDVSIISTGGTVAS 21 (352)
T ss_dssp SCEEEEEESSCCCCC
T ss_pred CCEEEEEECCCcccc
Confidence 369999999998764
No 35
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.19 E-value=46 Score=21.43 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCccchhh-h----------HHHHHHHHHHHHhCCCCCCCCeEEEEecCC
Q 039995 31 ELNFVKDIAAATGVVLDPVY-S----------GKAAYGMLNDMAQNPKKWEGRKVLFVHTGG 81 (118)
Q Consensus 31 ~~~~I~~~a~~eGI~LDPVY-T----------gKa~~gL~~~l~~~g~~~~g~rVLfiHTGG 81 (118)
....++.++++-||+-|-+. + +-....|. +..+++.+.+|.+|+++-.|+
T Consensus 77 ~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~-~a~~~g~i~~Gd~vll~gfG~ 137 (148)
T d1u6ea2 77 NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMA-ELLTTGAAKPGDLALLIGYGA 137 (148)
T ss_dssp CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHH-HHHHHTSSCTTCEEEEEEEET
T ss_pred cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHH-HHHHcCCCCCCCEEEEEEEch
Confidence 34566666777788776433 2 22345554 455556888899999987664
No 36
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=29.00 E-value=5.7 Score=26.33 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=33.5
Q ss_pred CCCcccCCHHHHHHHHHHHH-HhCCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEE
Q 039995 21 GLGYAINTSEELNFVKDIAA-ATGVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFV 77 (118)
Q Consensus 21 g~GYG~~t~e~~~~I~~~a~-~eGI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfi 77 (118)
-.||-.++|.-.+++..+.+ ...|+.-|+=+||++.+++..+.. ...+.+||++
T Consensus 20 ~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~---~~~~~~vl~l 74 (202)
T d2p6ra3 20 EEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVRE---AIKGGKSLYV 74 (202)
T ss_dssp CC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHH---HHTTCCEEEE
T ss_pred HcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHH---hhccCcceee
Confidence 35787888877777776644 556778999999998876542221 1124467666
No 37
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]}
Probab=28.07 E-value=11 Score=28.02 Aligned_cols=14 Identities=21% Similarity=0.406 Sum_probs=11.8
Q ss_pred CeEEEEecCCcccc
Q 039995 72 RKVLFVHTGGLLGL 85 (118)
Q Consensus 72 ~rVLfiHTGGl~gl 85 (118)
.||++|+|||..+.
T Consensus 2 Pki~vi~TGGTI~~ 15 (326)
T d1nnsa_ 2 PNITILATGGTIAG 15 (326)
T ss_dssp CEEEEEEEESGGGC
T ss_pred CeEEEEEcCCCccc
Confidence 38999999998763
No 38
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=27.63 E-value=12 Score=24.12 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=24.8
Q ss_pred CccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEec
Q 039995 44 VVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHT 79 (118)
Q Consensus 44 I~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHT 79 (118)
|.+||=|..+.....++.+.+.+.+.++ .++++|+
T Consensus 87 If~DPPy~~~~~~~~l~~i~~~~~L~~~-g~iiiE~ 121 (152)
T d2esra1 87 VFLDPPYAKETIVATIEALAAKNLLSEQ-VMVVCET 121 (152)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTTCEEEE-EEEEEEE
T ss_pred eEechhhccchHHHHHHHHHHCCCcCCC-eEEEEEe
Confidence 8899999888777777777765545444 4566665
No 39
>d2evea1 b.122.1.8 (A:2-149) Hypothetical protein PSPTO5229 {Pseudomonas syringae [TaxId: 317]}
Probab=26.19 E-value=17 Score=24.69 Aligned_cols=19 Identities=26% Similarity=0.447 Sum_probs=14.8
Q ss_pred CCCeEEEEecC-Cccccccc
Q 039995 70 EGRKVLFVHTG-GLLGLFDK 88 (118)
Q Consensus 70 ~g~rVLfiHTG-Gl~glf~~ 88 (118)
.|..++|.||| +-+|+.+-
T Consensus 42 ~GD~~~fYHS~~~~~~IvGi 61 (148)
T d2evea1 42 EGDEFFFYHSSCPEPGIAGI 61 (148)
T ss_dssp TTCEEEEEECSSSSCEEEEE
T ss_pred cCCEEEEEecCCCCCceEEE
Confidence 47899999999 66766553
No 40
>d2ar1a1 b.122.1.8 (A:7-163) Hypothetical protein LmjF36.6870 {Leishmania major [TaxId: 5664]}
Probab=25.09 E-value=20 Score=24.43 Aligned_cols=17 Identities=41% Similarity=0.544 Sum_probs=12.7
Q ss_pred CCCCeEEEEecC-Ccccc
Q 039995 69 WEGRKVLFVHTG-GLLGL 85 (118)
Q Consensus 69 ~~g~rVLfiHTG-Gl~gl 85 (118)
..|..++|.||| +-+++
T Consensus 46 k~GD~~~fYHS~~~~~~i 63 (157)
T d2ar1a1 46 SVGDKVLFYHSNTKEPGV 63 (157)
T ss_dssp CTTCEEEEEECSSSSCEE
T ss_pred cCCCEEEEEEcCCCCCce
Confidence 358899999999 44444
No 41
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]}
Probab=24.22 E-value=25 Score=22.29 Aligned_cols=9 Identities=33% Similarity=0.888 Sum_probs=7.4
Q ss_pred CCCeEEEEe
Q 039995 70 EGRKVLFVH 78 (118)
Q Consensus 70 ~g~rVLfiH 78 (118)
.|+.|||+|
T Consensus 22 ~g~~illlH 30 (279)
T d1hkha_ 22 SGQPVVLIH 30 (279)
T ss_dssp SSEEEEEEC
T ss_pred cCCeEEEEC
Confidence 367899999
No 42
>d1yt3a2 a.60.8.3 (A:295-375) Ribonuclease D {Escherichia coli [TaxId: 562]}
Probab=24.04 E-value=25 Score=20.88 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=37.1
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHH
Q 039995 21 GLGYAINTSEELNFVKDIAAATGVVLDPVYSGKAAYGMLND 61 (118)
Q Consensus 21 g~GYG~~t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~ 61 (118)
.+||-+.-..+.+.++..|++.||.-+=+-|-|-+-.++..
T Consensus 6 ~P~yK~~~K~lk~~v~~~Ae~~~IapelLaskkdle~ll~~ 46 (81)
T d1yt3a2 6 MPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNW 46 (81)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHTCCHHHHCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCCHHHhcCHHHHHHHHHH
Confidence 58999989999999999999999999999999998888753
No 43
>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi [TaxId: 556]}
Probab=23.68 E-value=15 Score=27.15 Aligned_cols=14 Identities=21% Similarity=0.479 Sum_probs=11.7
Q ss_pred CeEEEEecCCcccc
Q 039995 72 RKVLFVHTGGLLGL 85 (118)
Q Consensus 72 ~rVLfiHTGGl~gl 85 (118)
.||++|+|||..|.
T Consensus 3 Pki~vi~TGGTIa~ 16 (325)
T d1o7ja_ 3 PNIVILATGGTIAG 16 (325)
T ss_dssp CEEEEEEEESGGGC
T ss_pred CEEEEEECCCcccc
Confidence 48999999998654
No 44
>d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]}
Probab=23.52 E-value=13 Score=26.32 Aligned_cols=14 Identities=21% Similarity=0.556 Sum_probs=11.3
Q ss_pred CCCeEEEEecCCcc
Q 039995 70 EGRKVLFVHTGGLL 83 (118)
Q Consensus 70 ~g~rVLfiHTGGl~ 83 (118)
.|.+|+.+|.||-|
T Consensus 40 ~G~~vViVHGGgpq 53 (307)
T d1b7ba_ 40 QGHRLIVSHGNGPQ 53 (307)
T ss_dssp TTCEEEEEECCHHH
T ss_pred CCCEEEEEcCCHHH
Confidence 37799999999843
No 45
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}
Probab=22.93 E-value=31 Score=24.04 Aligned_cols=53 Identities=9% Similarity=0.303 Sum_probs=38.0
Q ss_pred CCccchhh-hHHHHHHHHHHHHhCCCCCCCCeEEEEecCCcccccccHHHhhHhhccccccccc
Q 039995 43 GVVLDPVY-SGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLFDKVDQMAPLLKNWSRMDVH 105 (118)
Q Consensus 43 GI~LDPVY-TgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf~~~~~~~~~~~~~~~~~~~ 105 (118)
=|++||.= ||.++...++.+.+.| -++|+|++ +.+..+-++.+.++++..++.
T Consensus 135 VillDPmlATG~s~~~ai~~L~~~g----~~~I~~~~------~ias~~Gi~~l~~~~P~v~i~ 188 (215)
T d1xtta1 135 VIIADPMIATASTMLKVLEEVVKAN----PKRIYIVS------IISSEYGVNKILSKYPFIYLF 188 (215)
T ss_dssp EEEECSEESSSHHHHHHHHHHGGGC----CSEEEEEC------SEEEHHHHHHHHHHCTTSEEE
T ss_pred EEEeCchHhcchhHHHHHHHHhccC----CCEEEEEE------EEecHHHHHHHHHHCcCCEEE
Confidence 47779985 6888888887777654 25899984 566667777777888875443
No 46
>d4pgaa_ c.88.1.1 (A:) Glutaminase-asparaginase {Pseudomonas sp., 7A [TaxId: 306]}
Probab=22.80 E-value=15 Score=27.24 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=12.0
Q ss_pred CeEEEEecCCcccc
Q 039995 72 RKVLFVHTGGLLGL 85 (118)
Q Consensus 72 ~rVLfiHTGGl~gl 85 (118)
.||+.|+|||..+-
T Consensus 3 pkI~vi~TGGTI~~ 16 (330)
T d4pgaa_ 3 ANVVILATGGTIAG 16 (330)
T ss_dssp CEEEEEEEESGGGC
T ss_pred CEEEEEECCCCccc
Confidence 48999999998864
No 47
>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.31 E-value=70 Score=25.22 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=40.3
Q ss_pred CCCcccCCHHHHHHHHHHHHHh----CCccchhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecC
Q 039995 21 GLGYAINTSEELNFVKDIAAAT----GVVLDPVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTG 80 (118)
Q Consensus 21 g~GYG~~t~e~~~~I~~~a~~e----GI~LDPVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTG 80 (118)
..++...++|.++.|+.+.++. |.++||= ||=++.++.+...++ ...+..+|++=|-
T Consensus 389 F~s~svsD~et~~tIk~vye~~~n~~gYllDPH-TAVG~~aa~k~~~~~--~~~~~p~VvLATA 449 (511)
T d1kl7a_ 389 FTSERVSNEETSETIKKIYESSVNPKHYILDPH-TAVGVCATERLIAKD--NDKSIQYISLSTA 449 (511)
T ss_dssp EEEEECCHHHHHHHHHHHHHHCCSSTTCCCCHH-HHHHHHHHHHHHHHH--CCTTSEEEEEECB
T ss_pred eeEEEeCHHHHHHHHHHHHHhcCccCCeEECCc-HHHHHHHHHHHHHhc--cCCCCcEEEEeCc
Confidence 5566778899999999999987 9999995 677777765533332 1234456766554
No 48
>d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=21.59 E-value=19 Score=27.21 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=12.1
Q ss_pred CeEEEEecCCcccc
Q 039995 72 RKVLFVHTGGLLGL 85 (118)
Q Consensus 72 ~rVLfiHTGGl~gl 85 (118)
.||+.|+|||..+.
T Consensus 17 PkI~ii~TGGTIa~ 30 (363)
T d1zq1a2 17 PEVTIIGTGGTIAS 30 (363)
T ss_dssp CEEEEEECSCCCCE
T ss_pred CEEEEEECCCcccc
Confidence 59999999998764
No 49
>d1to0a_ c.116.1.3 (A:) Hypothetical protein YydA {Bacillus subtilis [TaxId: 1423]}
Probab=21.50 E-value=37 Score=22.10 Aligned_cols=38 Identities=29% Similarity=0.420 Sum_probs=28.3
Q ss_pred Cccc---hhhhHHHHHHHHHHHHhCCCCCCCCeEEEEecCCccccc
Q 039995 44 VVLD---PVYSGKAAYGMLNDMAQNPKKWEGRKVLFVHTGGLLGLF 86 (118)
Q Consensus 44 I~LD---PVYTgKa~~gL~~~l~~~g~~~~g~rVLfiHTGGl~glf 86 (118)
|.|| ..+|...|+.++......| .++|.|+- ||.-|+-
T Consensus 74 I~LDe~Gk~~sS~~fA~~l~~~~~~g----~~~i~FiI-GGa~G~~ 114 (157)
T d1to0a_ 74 IALAIEGKMKTSEELADTIDKLATYG----KSKVTFVI-GGSLGLS 114 (157)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHHTTT----CCEEEEEE-CCSSCCC
T ss_pred EEeccchhhhhHHHHHHHHHHHHhcC----CcceEEEE-CCCCCCC
Confidence 7788 6789999999987655432 25788886 8888773
No 50
>d2hc5a1 d.352.1.1 (A:1-109) Hypothetical protein YvyC {Bacillus subtilis [TaxId: 1423]}
Probab=21.42 E-value=12 Score=23.94 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=19.8
Q ss_pred cCCHHHHHHHHHHHHHhCCccc
Q 039995 26 INTSEELNFVKDIAAATGVVLD 47 (118)
Q Consensus 26 ~~t~e~~~~I~~~a~~eGI~LD 47 (118)
.|+++.++..+.+.+..|+++|
T Consensus 85 IP~Ee~l~l~~~i~e~~Gll~D 106 (109)
T d2hc5a1 85 IPPKRWLDFYAAMTEFLGLFVD 106 (109)
T ss_dssp ECHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHhCceec
Confidence 4788999999999999999988
No 51
>d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.12 E-value=14 Score=26.46 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=10.8
Q ss_pred CCCeEEEEecCCc
Q 039995 70 EGRKVLFVHTGGL 82 (118)
Q Consensus 70 ~g~rVLfiHTGGl 82 (118)
.|.+|+++|.||.
T Consensus 42 ~G~~vVlVhGGgp 54 (313)
T d1e19a_ 42 RGYEVVITHGNGP 54 (313)
T ss_dssp TTCEEEEECCCHH
T ss_pred CCCEEEEEcCCHH
Confidence 3679999999984
No 52
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=21.04 E-value=22 Score=21.68 Aligned_cols=12 Identities=25% Similarity=0.520 Sum_probs=9.2
Q ss_pred CCeEEEEecCCc
Q 039995 71 GRKVLFVHTGGL 82 (118)
Q Consensus 71 g~rVLfiHTGGl 82 (118)
|+.|||||-.|.
T Consensus 2 G~~vvllHG~~~ 13 (258)
T d1xkla_ 2 GKHFVLVHGACH 13 (258)
T ss_dssp CCEEEEECCTTC
T ss_pred CCcEEEECCCCC
Confidence 789999995443
No 53
>d1v7pc_ c.62.1.1 (C:) Integrin alpha2-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.68 E-value=36 Score=21.93 Aligned_cols=53 Identities=15% Similarity=-0.049 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHHH--hCCCCCCCCeEEEEecCCcc
Q 039995 28 TSEELNFVKDIAAATGVVLDPVYSGKAAYGMLNDMA--QNPKKWEGRKVLFVHTGGLL 83 (118)
Q Consensus 28 t~e~~~~I~~~a~~eGI~LDPVYTgKa~~gL~~~l~--~~g~~~~g~rVLfiHTGGl~ 83 (118)
.+++.++|..+.. ..=..++|++|+....+.+- .++..+...+++.+-|.|-+
T Consensus 61 ~~~~~~~i~~~~~---~~g~~t~~~~AL~~a~~~~f~~~~~~R~~~~kvvVllTDG~s 115 (193)
T d1v7pc_ 61 KEEMIVATSQTSQ---YGGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGES 115 (193)
T ss_dssp HHHHHHHHHHCCC---CCCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCC
T ss_pred HHHHHHHHHhhhh---hccCccchHHHHHHHHHhccccccCCCCCCceEEEEEecCCc
Confidence 3455566655322 22246899999988776542 22333344678888888854
No 54
>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}
Probab=20.64 E-value=78 Score=22.40 Aligned_cols=26 Identities=23% Similarity=0.134 Sum_probs=18.7
Q ss_pred CcccCCHHHHHHHHHHHH-HhCCccch
Q 039995 23 GYAINTSEELNFVKDIAA-ATGVVLDP 48 (118)
Q Consensus 23 GYG~~t~e~~~~I~~~a~-~eGI~LDP 48 (118)
||...++++.++|....+ ..|+.++|
T Consensus 63 ~Y~~g~~~Lr~aia~~~~~~~g~~~~~ 89 (394)
T d1c7na_ 63 GYTGPTEEYKKTVKKWMKDRHQWDIQT 89 (394)
T ss_dssp SSBCCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 576677888888877654 55887777
No 55
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}
Probab=20.62 E-value=42 Score=21.23 Aligned_cols=10 Identities=30% Similarity=0.677 Sum_probs=7.9
Q ss_pred CCCeEEEEec
Q 039995 70 EGRKVLFVHT 79 (118)
Q Consensus 70 ~g~rVLfiHT 79 (118)
.|..|||+|-
T Consensus 27 ~gp~vv~lHG 36 (293)
T d1ehya_ 27 AGPTLLLLHG 36 (293)
T ss_dssp CSSEEEEECC
T ss_pred CCCeEEEECC
Confidence 3678999993
No 56
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.10 E-value=25 Score=21.34 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=14.3
Q ss_pred CCCCCeEEEEecCCccc
Q 039995 68 KWEGRKVLFVHTGGLLG 84 (118)
Q Consensus 68 ~~~g~rVLfiHTGGl~g 84 (118)
++.|+|||...+||+-.
T Consensus 7 ~~~gkKv~vA~SGGvDS 23 (188)
T d1k92a1 7 LPVGQRIGIAFSGGLDT 23 (188)
T ss_dssp CCTTSEEEEECCSSHHH
T ss_pred CCCCCEEEEEeCCCHHH
Confidence 56799999999999643
Done!