BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039996
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54JL3|FTCD_DICDI Formimidoyltransferase-cyclodeaminase OS=Dictyostelium discoideum
GN=ftcd PE=3 SV=1
Length = 537
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 27/162 (16%)
Query: 6 LTCCKVYISESQNKAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDS 65
L C SE +++ +++I +A R + +++ + NR YT V
Sbjct: 4 LVECVPNFSEGRDQTIIDAISKAIRDTAGCTLLDVDPGKSTNRTVYTFVG---------- 53
Query: 66 CP--LKSTVFAMIKAAFENIEPGMHSGSHPRLGVVDHICFHPLASAPLDQVAGIAKSVVG 123
CP + + K AF+ I+ H G HPR+G +D F P+ + +++ +K
Sbjct: 54 CPDSIVNGAINATKVAFKLIDMTKHHGEHPRMGALDVCPFVPVRNVTMEECVNCSKEF-- 111
Query: 124 DIGSGLQGVIVIGSTRWVDNYNIPVFSTNIAAVRRIAKQVSE 165
R + +P+F A+ + KQ+ +
Sbjct: 112 -------------GKRISEEIGVPIFLYEEASTQSYRKQLKQ 140
>sp|P53603|FTCD_PIG Formimidoyltransferase-cyclodeaminase OS=Sus scrofa GN=FTCD PE=1
SV=1
Length = 541
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 6 LTCCKVYISESQNKAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDS 65
L C SE +N+ +++I +A ++++ + NR YT V + +
Sbjct: 4 LVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRPEDVVEG-- 61
Query: 66 CPLKSTVFAMIKAAFENIEPGMHSGSHPRLGVVDHICFHPLASAPLDQVAGIAKS 120
+AA++ I+ H G HPR+G +D F P+ +D+ A++
Sbjct: 62 ------ALNAARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQA 110
>sp|O88618|FTCD_RAT Formimidoyltransferase-cyclodeaminase OS=Rattus norvegicus GN=Ftcd
PE=1 SV=4
Length = 541
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 23/141 (16%)
Query: 9 CKVYISESQNKAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDSCPL 68
C SE N+ +++I QA ++++ + NR YT V + C +
Sbjct: 7 CVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQ-------PECVV 59
Query: 69 KSTVFAMIKAAFENIEPGMHSGSHPRLGVVDHICFHPLASAPLDQVAGIAKSVVGDIGSG 128
+ + A + A + I+ H G HPR+G +D F P+ +D+ AK+
Sbjct: 60 EGALSAA-RTASQLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAF------- 111
Query: 129 LQGVIVIGSTRWVDNYNIPVF 149
R + N+PV+
Sbjct: 112 --------GQRLAEELNVPVY 124
>sp|Q91XD4|FTCD_MOUSE Formimidoyltransferase-cyclodeaminase OS=Mus musculus GN=Ftcd PE=1
SV=1
Length = 541
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 23/141 (16%)
Query: 9 CKVYISESQNKAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDSCPL 68
C SE N+ +++I +A ++++ + NR YT V + C +
Sbjct: 7 CVPNFSEGNNQEVIDAISRAISQTPGCVLLDVDAGPSTNRTVYTFVGQ-------PECVV 59
Query: 69 KSTVFAMIKAAFENIEPGMHSGSHPRLGVVDHICFHPLASAPLDQVAGIAKSVVGDIGSG 128
+ + A + A + I+ H G HPR+G +D F P+ +++ AK+
Sbjct: 60 EGALHAA-RTASQLIDMSKHKGEHPRMGALDVCPFIPVRGVSMEECVLCAKAF------- 111
Query: 129 LQGVIVIGSTRWVDNYNIPVF 149
R + N+PV+
Sbjct: 112 --------GQRLAEELNVPVY 124
>sp|P0A8F7|URK_SHIFL Uridine kinase OS=Shigella flexneri GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R D N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B7LV30|URK_ESCF3 Uridine kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R D N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|P0A8F4|URK_ECOLI Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R D N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|P0A8F5|URK_ECOL6 Uridine kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R D N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|P0A8F6|URK_ECO57 Uridine kinase OS=Escherichia coli O157:H7 GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R D N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|Q9YH58|FTCD_CHICK Formimidoyltransferase-cyclodeaminase OS=Gallus gallus GN=FTCD PE=2
SV=1
Length = 541
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 6 LTCCKVYISESQNKAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDS 65
L C SE NK +E++ +A +++ + NR YT V +
Sbjct: 4 LVECVPNFSEGCNKEVIEALGRAISQTPGCTLLDVDAGASTNRTVYTFVGTPEAVVEG-- 61
Query: 66 CPLKSTVFAMIKAAFENIEPGMHSGSHPRLGVVDHICFHPLASAPLDQ 113
+ + A+E I+ H G HPR+G +D F P+ + +++
Sbjct: 62 ------ALSAARMAWELIDMSRHKGEHPRMGALDVCPFVPVMNISMEE 103
>sp|B5BF73|URK_SALPK Uridine kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=udk
PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|Q5PDX6|URK_SALPA Uridine kinase OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B5RBW3|URK_SALG2 Uridine kinase OS=Salmonella gallinarum (strain 287/91 / NCTC
13346) GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B4SXV3|URK_SALNS Uridine kinase OS=Salmonella newport (strain SL254) GN=udk PE=3
SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|P67408|URK_SALTY Uridine kinase OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|P67409|URK_SALTI Uridine kinase OS=Salmonella typhi GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B4TNH9|URK_SALSV Uridine kinase OS=Salmonella schwarzengrund (strain CVM19633)
GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|C0Q1G0|URK_SALPC Uridine kinase OS=Salmonella paratyphi C (strain RKS4594) GN=udk
PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|A9N7M0|URK_SALPB Uridine kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 /
SPB7) GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B4T9T4|URK_SALHS Uridine kinase OS=Salmonella heidelberg (strain SL476) GN=udk PE=3
SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B5R0B5|URK_SALEP Uridine kinase OS=Salmonella enteritidis PT4 (strain P125109)
GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B5FMU1|URK_SALDC Uridine kinase OS=Salmonella dublin (strain CT_02021853) GN=udk
PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|Q57MN1|URK_SALCH Uridine kinase OS=Salmonella choleraesuis (strain SC-B67) GN=udk
PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|B5EXV0|URK_SALA4 Uridine kinase OS=Salmonella agona (strain SL483) GN=udk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 129 LQGVIVIGSTRWVDNYNIPVF---STNIAAVRRIAKQVSERGGGLASVQAMVLIRGEDIT 185
L+G++++ R + N +F +I +RRI + V+ERG + SV A + +
Sbjct: 117 LEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQY---QKTVR 173
Query: 186 EVECNLLKPSKIGGD 200
+ ++PSK D
Sbjct: 174 PMFLQFIEPSKQYAD 188
>sp|Q9K6A4|Y3825_BACHD UPF0447 protein BH3825 OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH3825
PE=3 SV=2
Length = 249
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 19 KAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDSCPLKSTVFAMIKA 78
+ ++E + + F+ + +F + T Y V +L+ ++ DS
Sbjct: 76 RPSMEELNEIETAFNKS----RFAEFTVPAYSYVSVVELSNYMAGDSD----------DD 121
Query: 79 AFENIEPGMHSGSHPRLGVVDHICFHPLASA----------PLDQVAGIAKS--VVGDIG 126
++N P + + +P+L H+CF+P+ P+DQ + KS ++G
Sbjct: 122 PYQN--PHVRARLYPQLPKAKHVCFYPMDKRRQGDDNWYMLPMDQRRELMKSHGMIGRSY 179
Query: 127 SGLQGVIVIGSTRWVD-NYNIPVFSTNIAAVRRIA-----KQVSERGGGLASVQAMVLIR 180
+G I+ GS + D + + +F+ ++ +++ +VS R G S L+
Sbjct: 180 AGKVKQIITGSVGFDDWEWGVTLFADDVLQFKKLVYEMRFDEVSARYGEFGSFFVGNLLT 239
Query: 181 GEDI 184
E I
Sbjct: 240 AEGI 243
>sp|P32298|GRK4_HUMAN G protein-coupled receptor kinase 4 OS=Homo sapiens GN=GRK4 PE=1
SV=3
Length = 578
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 149 FSTNIAAVRRI------AKQVSERGGGLASVQAMVLIRGEDITEVECNLLKPSKIGGDKV 202
FS + ++ R+ +K++ RG G A V+ + + + +E N+L+P D
Sbjct: 413 FSEDAKSICRMLLTKNPSKRLGCRGEGAAGVKQHPVFKDINFRRLEANMLEPP-FCPDPH 471
Query: 203 QVEVDELAAVEGMAVGKGYYTDLSQEEIIERY 234
V ++ +E +V KG Y D + E+ R+
Sbjct: 472 AVYCKDVLDIEQFSVVKGIYLDTADEDFYARF 503
>sp|O95954|FTCD_HUMAN Formimidoyltransferase-cyclodeaminase OS=Homo sapiens GN=FTCD PE=1
SV=2
Length = 541
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 9 CKVYISESQNKAALESIEQAARLFSAAIIVNKFEDVTYNRVGYTVVSKLAPTLSSDSCPL 68
C SE +N+ +++I A ++++ + NR YT V C +
Sbjct: 7 CVPNFSEGKNQEVIDAISGAITQTPGCVLLDVDAGPSTNRTVYTFVG-------PPECVV 59
Query: 69 KSTVFAMIKAAFENIEPGMHSGSHPRLGVVDHICFHPLASAPLDQVAGIAKS 120
+ + A + A I+ H G HPR+G +D F P+ +D+ A++
Sbjct: 60 EGALNAA-RVASRLIDMSRHQGEHPRMGALDVCPFIPVRGVSVDECVLCAQA 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,740,021
Number of Sequences: 539616
Number of extensions: 3117744
Number of successful extensions: 9723
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 9713
Number of HSP's gapped (non-prelim): 38
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)