Query         039998
Match_columns 70
No_of_seqs    35 out of 37
Neff          3.5 
Searched_HMMs 29240
Date          Mon Mar 25 06:02:09 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039998.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039998hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1kf6_D Fumarate reductase 13 k  64.3     7.7 0.00026   25.8   3.6   24   11-34     93-116 (119)
  2 1oqw_A Fimbrial protein; type   44.3      55  0.0019   20.3   5.2   28   18-45      9-36  (144)
  3 3sok_A Fimbrial protein; pilus  43.4      58   0.002   20.5   5.2   25   18-42      9-33  (151)
  4 2ifo_A Inovirus; helical virus  38.9      33  0.0011   19.2   3.0   22   21-42     25-46  (46)
  5 4ewp_A 3-oxoacyl-[acyl-carrier  34.9      22 0.00076   24.7   2.3   32   36-67     68-100 (350)
  6 2wya_A Hydroxymethylglutaryl-C  33.9      23  0.0008   26.2   2.3   33   35-67     59-92  (460)
  7 2hi2_A Fimbrial protein; type   33.7      50  0.0017   20.6   3.6   25   18-42      9-33  (158)
  8 1pfi_A Major coat protein of P  31.4      51  0.0018   18.6   3.0   24   18-41     23-46  (46)
  9 1afo_A Glycophorin A; integral  30.3      72  0.0025   17.5   3.5   24   11-34      6-29  (40)
 10 3c8l_A FTSZ-like protein of un  29.3      33  0.0011   22.7   2.2   17   34-50     22-38  (122)
 11 1jhg_A Trp operon repressor; c  28.2      25 0.00085   22.1   1.5   17   31-48     72-88  (101)
 12 1wgn_A UBAP1, ubiquitin associ  27.8      33  0.0011   20.5   1.9   21   25-45     23-43  (63)
 13 3ug9_A Archaeal-type opsin 1,   27.0      68  0.0023   24.0   3.9   31   13-43    187-217 (333)
 14 1lgh_A LH II, B800/850, light   26.4      55  0.0019   19.0   2.6   26    9-34     10-35  (56)
 15 2zxx_A Geminin; coiled-coil, c  23.2      28 0.00097   21.4   1.0   13   39-51     26-38  (79)
 16 3vr8_C Cytochrome B-large subu  21.0      68  0.0023   22.1   2.7   30    4-33    142-173 (188)
 17 3iqu_A 14-3-3 protein sigma; s  20.9 1.5E+02   0.005   21.1   4.5   36   11-48    166-209 (236)
 18 2yew_B E1 envelope glycoprotei  20.8      84  0.0029   24.8   3.4    9   11-19    392-400 (427)
 19 3ubw_A 14-3-3E, 14-3-3 protein  20.6      49  0.0017   24.1   1.9   36   11-48    189-232 (261)
 20 1wlq_A Geminin; coiled-coil; 2  20.3      44  0.0015   20.8   1.5   13   39-51     30-42  (83)

No 1  
>1kf6_D Fumarate reductase 13 kDa hydrophobic protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: f.21.2.2 PDB: 1kfy_D* 1l0v_D* 2b76_D* 3cir_D* 3p4p_D* 3p4q_D* 3p4r_D* 3p4s_D*
Probab=64.32  E-value=7.7  Score=25.83  Aligned_cols=24  Identities=25%  Similarity=0.736  Sum_probs=20.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHH
Q 039998           11 EISATRWVYMALGFVISVILMVCV   34 (70)
Q Consensus        11 e~S~~~W~~~~vGlVaTVvv~vyV   34 (70)
                      +....+|++|++.++.||+..+.|
T Consensus        93 h~~~~~~~~Yg~A~l~sv~~~~~v  116 (119)
T 1kf6_D           93 HVPAGKWVFYGLAAILTVVTLIGV  116 (119)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCcchhhHHHHHHHHHHHHHHHh
Confidence            344679999999999999988776


No 2  
>1oqw_A Fimbrial protein; type IV pilin, fiber-forming protein, adhesion, pseudomonas aerugionosa, PAK pilin, cell adhesion; 2.00A {Pseudomonas aeruginosa} SCOP: d.24.1.1
Probab=44.25  E-value=55  Score=20.27  Aligned_cols=28  Identities=14%  Similarity=0.197  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039998           18 VYMALGFVISVILMVCVAKVAKASLDKS   45 (70)
Q Consensus        18 ~~~~vGlVaTVvv~vyVTrvAr~AL~~a   45 (70)
                      ++-++|+++++++--|-.-+.|.-++++
T Consensus         9 vi~Ii~il~~ia~p~~~~~~~~~~~~~~   36 (144)
T 1oqw_A            9 VVAIIGILAAIAIPQYQNYVARSEGASA   36 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4668899999988887766655544443


No 3  
>3sok_A Fimbrial protein; pilus subunit, extracellular, cell adhesion; 2.30A {Dichelobacter nodosus}
Probab=43.39  E-value=58  Score=20.55  Aligned_cols=25  Identities=12%  Similarity=0.219  Sum_probs=18.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 039998           18 VYMALGFVISVILMVCVAKVAKASL   42 (70)
Q Consensus        18 ~~~~vGlVaTVvv~vyVTrvAr~AL   42 (70)
                      ++-++|+++++++--|-..+.|.-+
T Consensus         9 viaIigiLaaia~p~~~~~~~~~~~   33 (151)
T 3sok_A            9 VVAIIGILAAFAIPAYNDYIARSQA   33 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999998888776655433


No 4  
>2ifo_A Inovirus; helical virus; NMR {Filamentous phage} SCOP: h.1.4.1
Probab=38.91  E-value=33  Score=19.23  Aligned_cols=22  Identities=23%  Similarity=0.292  Sum_probs=16.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 039998           21 ALGFVISVILMVCVAKVAKASL   42 (70)
Q Consensus        21 ~vGlVaTVvv~vyVTrvAr~AL   42 (70)
                      +.+.+..|.+.+.+-|.-||+|
T Consensus        25 IG~aVLgV~v~i~v~k~IRral   46 (46)
T 2ifo_A           25 IGGAVLTVMVGIKVYKWVRRAM   46 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhC
Confidence            4456667778888889998874


No 5  
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=34.95  E-value=22  Score=24.65  Aligned_cols=32  Identities=6%  Similarity=0.217  Sum_probs=18.8

Q ss_pred             HHHHHHHHHHHHhcCC-cceeccCCCCCCCCCC
Q 039998           36 KVAKASLDKSLIENGE-KCIMGQSMLPAGPESP   67 (70)
Q Consensus        36 rvAr~AL~~ai~E~~d-~~~~~~~~l~i~~~~~   67 (70)
                      +-||+||+++=.+.+| |.++.++..|--..|+
T Consensus        68 ~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~  100 (350)
T 4ewp_A           68 GAAREALERAGLQGSDLDAVIVSTVTFPHATPS  100 (350)
T ss_dssp             HHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSC
T ss_pred             HHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCc
Confidence            4455555554334445 8888777777655565


No 6  
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=33.88  E-value=23  Score=26.18  Aligned_cols=33  Identities=3%  Similarity=-0.067  Sum_probs=23.3

Q ss_pred             HHHHHHHHHHHHHhcCC-cceeccCCCCCCCCCC
Q 039998           35 AKVAKASLDKSLIENGE-KCIMGQSMLPAGPESP   67 (70)
Q Consensus        35 TrvAr~AL~~ai~E~~d-~~~~~~~~l~i~~~~~   67 (70)
                      .+-||+||+++=.+.++ |.|+.+++.|.-..|+
T Consensus        59 ~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps   92 (460)
T 2wya_A           59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKA   92 (460)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSC
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCc
Confidence            45677777776555566 8888888887766665


No 7  
>2hi2_A Fimbrial protein; type IV pilin, fiber-forming protein, membrane protein, DNA protein, contractIle protein, cell adhesion; HET: MEA GLA DT6 HTO; 2.30A {Neisseria gonorrhoeae} PDB: 2hil_A* 1ay2_A* 2pil_A*
Probab=33.67  E-value=50  Score=20.62  Aligned_cols=25  Identities=24%  Similarity=0.296  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 039998           18 VYMALGFVISVILMVCVAKVAKASL   42 (70)
Q Consensus        18 ~~~~vGlVaTVvv~vyVTrvAr~AL   42 (70)
                      ++.++|+++++++-.|-..+.|.-+
T Consensus         9 vi~ii~il~~~~~p~~~~~~~~~~~   33 (158)
T 2hi2_A            9 VIAIVGILAAVALPAYQDYTARAQV   33 (158)
T ss_dssp             HHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4567888988888777665554433


No 8  
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=31.37  E-value=51  Score=18.58  Aligned_cols=24  Identities=4%  Similarity=0.044  Sum_probs=15.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 039998           18 VYMALGFVISVILMVCVAKVAKAS   41 (70)
Q Consensus        18 ~~~~vGlVaTVvv~vyVTrvAr~A   41 (70)
                      .=|++|.++-+.|-=++.++-|||
T Consensus        23 ~~~IVGaLvil~VAGLiysm~RKa   46 (46)
T 1pfi_A           23 GGYIVGALVILAVAGLIYSMLRKA   46 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            346677776666666666776654


No 9  
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=30.33  E-value=72  Score=17.54  Aligned_cols=24  Identities=17%  Similarity=0.275  Sum_probs=16.9

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHH
Q 039998           11 EISATRWVYMALGFVISVILMVCV   34 (70)
Q Consensus        11 e~S~~~W~~~~vGlVaTVvv~vyV   34 (70)
                      .+|.-.-++++.|.+|.|+-+++.
T Consensus         6 ~fs~p~i~lII~~vmaGiIG~Ill   29 (40)
T 1afo_A            6 HFSEPEITLIIFGVMAGVIGTILL   29 (40)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCchhHHHHHHHHHHHHHHHHH
Confidence            455557788888888877776654


No 10 
>3c8l_A FTSZ-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.22A {Nostoc punctiforme}
Probab=29.31  E-value=33  Score=22.66  Aligned_cols=17  Identities=12%  Similarity=0.196  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHhcC
Q 039998           34 VAKVAKASLDKSLIENG   50 (70)
Q Consensus        34 VTrvAr~AL~~ai~E~~   50 (70)
                      .||=|+||.++||..|.
T Consensus        22 ~TkAA~RAvrDAI~~ns   38 (122)
T 3c8l_A           22 PTIAASRAVRNAIAHNA   38 (122)
T ss_dssp             HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhhhc
Confidence            58999999999998875


No 11 
>1jhg_A Trp operon repressor; complex (regulatory protein-peptide), DNA-binding regulatory complex (regulatory protein-peptide) complex; HET: TRP; 1.30A {Escherichia coli} SCOP: a.4.12.1 PDB: 1co0_A* 1mi7_R 1p6z_R 1wrp_R* 1zt9_A* 2oz9_R* 3ssw_R 3wrp_A 1rcs_A* 1wrs_R* 1wrt_R 2xdi_A 3ssx_R* 1trr_A* 1tro_A*
Probab=28.18  E-value=25  Score=22.07  Aligned_cols=17  Identities=18%  Similarity=0.331  Sum_probs=12.7

Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 039998           31 MVCVAKVAKASLDKSLIE   48 (70)
Q Consensus        31 ~vyVTrvAr~AL~~ai~E   48 (70)
                      .-||+|+ +++|++.-.+
T Consensus        72 ~stISRi-~r~L~~l~~~   88 (101)
T 1jhg_A           72 IATITRG-SNSLKAAPVE   88 (101)
T ss_dssp             HHHHHHH-HHHHHHSCHH
T ss_pred             hhhhhHH-HHHHHHccHH
Confidence            4589999 8899765444


No 12 
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=27.78  E-value=33  Score=20.50  Aligned_cols=21  Identities=19%  Similarity=0.150  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 039998           25 VISVILMVCVAKVAKASLDKS   45 (70)
Q Consensus        25 VaTVvv~vyVTrvAr~AL~~a   45 (70)
                      |.+++-|=|=.+.||+||++.
T Consensus        23 V~~LvsMGFs~~qA~kALKat   43 (63)
T 1wgn_A           23 VETVVNMGYSYECVLRAMKKK   43 (63)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHHHHHHHc
Confidence            678888888899999999764


No 13 
>3ug9_A Archaeal-type opsin 1, archaeal-type opsin 2; microbialrhodopsin, seven-transmembrane, light-gated cation membrane protein; HET: RET OLA; 2.30A {Chlamydomonas reinhardtii}
Probab=27.04  E-value=68  Score=24.01  Aligned_cols=31  Identities=16%  Similarity=0.295  Sum_probs=19.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039998           13 SATRWVYMALGFVISVILMVCVAKVAKASLD   43 (70)
Q Consensus        13 S~~~W~~~~vGlVaTVvv~vyVTrvAr~AL~   43 (70)
                      +..+|.++.+|.+.-.++...+.+.++++.+
T Consensus       187 ~~~kw~wfvIs~~~~~ily~l~~ge~~kaa~  217 (333)
T 3ug9_A          187 GYVRVIFFLMGLCYGIYTFFNAAKVYIEAYH  217 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568999999987544444334455666554


No 14 
>1lgh_A LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=26.44  E-value=55  Score=18.95  Aligned_cols=26  Identities=19%  Similarity=0.383  Sum_probs=21.6

Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHH
Q 039998            9 WNEISATRWVYMALGFVISVILMVCV   34 (70)
Q Consensus         9 ~~e~S~~~W~~~~vGlVaTVvv~vyV   34 (70)
                      |.-+.|.++.....||++...++|=.
T Consensus        10 WlvvdP~~~L~~l~~~v~vlAllIH~   35 (56)
T 1lgh_A           10 WLVINPSTWLPVIWIVATVVAIAVHA   35 (56)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCceeHHHHHHHHHHHHHHHHH
Confidence            55678999999999999988887754


No 15 
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=23.19  E-value=28  Score=21.43  Aligned_cols=13  Identities=31%  Similarity=0.427  Sum_probs=11.7

Q ss_pred             HHHHHHHHHhcCC
Q 039998           39 KASLDKSLIENGE   51 (70)
Q Consensus        39 r~AL~~ai~E~~d   51 (70)
                      |+||.+++.||++
T Consensus        26 R~AL~eaL~EN~~   38 (79)
T 2zxx_A           26 RKALYEALKENEK   38 (79)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7899999999875


No 16 
>3vr8_C Cytochrome B-large subunit; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_C*
Probab=20.99  E-value=68  Score=22.13  Aligned_cols=30  Identities=23%  Similarity=0.428  Sum_probs=20.2

Q ss_pred             ccccCcc--ccchHHHHHHHHHHHHHHHHHHH
Q 039998            4 DVTHGWN--EISATRWVYMALGFVISVILMVC   33 (70)
Q Consensus         4 dvthg~~--e~S~~~W~~~~vGlVaTVvv~vy   33 (70)
                      |..+|..  +.-.+-|+.++++++.|+++.+|
T Consensus       142 D~G~gl~l~~~~~sg~~vl~lSvvltl~la~~  173 (188)
T 3vr8_C          142 DMAKGTDIPSIYRGAYLVLGLAALISLAVVVY  173 (188)
T ss_pred             HhcccccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4445543  34467788888888888877666


No 17 
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=20.88  E-value=1.5e+02  Score=21.07  Aligned_cols=36  Identities=19%  Similarity=0.409  Sum_probs=24.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHh
Q 039998           11 EISATRWVYMALGFVISVILMVC--------VAKVAKASLDKSLIE   48 (70)
Q Consensus        11 e~S~~~W~~~~vGlVaTVvv~vy--------VTrvAr~AL~~ai~E   48 (70)
                      +-+|++=+.  +||.-..-|..|        --++||+|+++|++|
T Consensus       166 ~L~pthPir--LGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~e  209 (236)
T 3iqu_A          166 EMPPTNPIR--LGLALNFSVFHYEIANSPEEAISLAKTTFDEAMAD  209 (236)
T ss_dssp             HSCTTCHHH--HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCcHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence            345555555  455555545555        358999999999998


No 18 
>2yew_B E1 envelope glycoprotein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=20.83  E-value=84  Score=24.77  Aligned_cols=9  Identities=22%  Similarity=0.568  Sum_probs=6.0

Q ss_pred             ccchHHHHH
Q 039998           11 EISATRWVY   19 (70)
Q Consensus        11 e~S~~~W~~   19 (70)
                      +.+.|.|++
T Consensus       392 S~Taw~W~~  400 (427)
T 2yew_B          392 STTAWQWLA  400 (427)
T ss_dssp             SHHHHHHHG
T ss_pred             hhhhHHHHH
Confidence            445688884


No 19 
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=20.55  E-value=49  Score=24.07  Aligned_cols=36  Identities=25%  Similarity=0.474  Sum_probs=24.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHh
Q 039998           11 EISATRWVYMALGFVISVILMVC--------VAKVAKASLDKSLIE   48 (70)
Q Consensus        11 e~S~~~W~~~~vGlVaTVvv~vy--------VTrvAr~AL~~ai~E   48 (70)
                      +-+|++=+.  +||.-..-|..|        --++||+|+++|++|
T Consensus       189 ~L~pThPir--LGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~e  232 (261)
T 3ubw_A          189 ELPPTHPIR--LGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAE  232 (261)
T ss_dssp             HSCTTCHHH--HHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHT
T ss_pred             hCCCCCcHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence            344555555  455555544445        268999999999998


No 20 
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=20.27  E-value=44  Score=20.83  Aligned_cols=13  Identities=31%  Similarity=0.427  Sum_probs=11.8

Q ss_pred             HHHHHHHHHhcCC
Q 039998           39 KASLDKSLIENGE   51 (70)
Q Consensus        39 r~AL~~ai~E~~d   51 (70)
                      |+||.+++.||.+
T Consensus        30 r~AL~eaL~EN~~   42 (83)
T 1wlq_A           30 RKALYEALKENEK   42 (83)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7899999999986


Done!