BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040003
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/146 (73%), Positives = 126/146 (86%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
RVIAESLSEEEIAGLKE F ID D SG IT EELK GL+RVGANL +SEI L QA D+
Sbjct: 15 RVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADV 74
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ 453
DNSGT+DY EFIAA LHLNKI+REDH++AAF+YFDKDGSGYITPDELQ AC++FG++D +
Sbjct: 75 DNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVR 134
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+E++ R+VDQDNDGRIDY+EFVA Q
Sbjct: 135 IEELXRDVDQDNDGRIDYNEFVAXXQ 160
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 4/157 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
AE LSEEEI GLKE+FKMIDTDNSG IT +ELK GL+RVG+ LM+SEI LM A DID S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED 456
GT+DYGEFIAA +HLNK++RE+++ +AFSYFDKDGSGYIT DE+Q AC+ FGLDD ++D
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 457 IIREVDQDNDGRIDYSEFVAMMQ----DSGLGKKVFK 489
+I+E+DQDNDG+IDY EF AMM+ + G+G++ +
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMR 157
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G G++ + Y+L +G+G +G + V+K T+ A K I K +
Sbjct: 18 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 77
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ HPN+I++ +ED +++VMELC GGELF+R++ + + E AA + + ++
Sbjct: 78 KSL----DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 133
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
V CH L V HRDLKPENFLF+ ++PLK IDFGL+ F+PG R
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 184
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G G++ + Y+L +G+G +G + V+K T+ A K I K +
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ HPN+I++ +ED +++VMELC GGELF+R++ + + E AA + + ++
Sbjct: 61 KSL----DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
V CH L V HRDLKPENFLF+ ++PLK IDFGL+ F+PG R
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 178/404 (44%), Gaps = 49/404 (12%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G + K G+L EMY +KLG G +G LC +K T E A K I RK
Sbjct: 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKII--RKTSVSTSSNSK 82
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN++++ +ED ++VME GGELFD II R + E AA +
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII 142
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLH 295
+ ++ V H ++HRDLKPEN L +++++A +K +DFGLS F + RL
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE--RLG 200
Query: 296 FLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAV-------PPIGDRVIAESLSEEEIA-- 346
++ + L + +E +W V + PP G + E L + E
Sbjct: 201 TAYY------IAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY 254
Query: 347 ------------GLKEMFK-MIDTDNSGYITLEE-LKKGLQRVGANLMDSEIDGLMQAGD 392
G K++ K M+ D+ I+ ++ L+ + + +S I+ A
Sbjct: 255 TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANA 314
Query: 393 IDNSGTMDYGEFI--AAMLH----LNKIQREDHMYAAFSYFDKDGSGYITPDEL------ 440
I+N + + AA+L+ L + + F + DK+G G + EL
Sbjct: 315 IENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSK 374
Query: 441 ----QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ A +++++ I+ D D +G IDYSEFV + D
Sbjct: 375 LSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMD 418
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--------LMDSEIDGLMQAGD 392
S+EE L ++F+ ID + G + +EL G ++ ++SE+D ++ A D
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
D +G +DY EF+ + + +D + +AF FD+DG+G I+ DEL + FGLD
Sbjct: 401 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGLDHL 457
Query: 453 Q---LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ +++I +D +NDG +D+ EF M+Q
Sbjct: 458 ESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 177/418 (42%), Gaps = 59/418 (14%)
Query: 112 GLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXX 171
+ G + +K G + E Y RKLG G +G LC EK E A K I K +
Sbjct: 20 AINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRY 79
Query: 172 XXXXXXXXXXMHHLAG---------HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ 222
+ HPN+I++ +ED ++V E GGELF++II
Sbjct: 80 SDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN 139
Query: 223 RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
R + E AA++ + I+ + H ++HRD+KPEN L N+ +K +DFGLS FF
Sbjct: 140 RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 283 RPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAV-------PPIGDRV 335
R RL ++ + L + NE +W V + PP G +
Sbjct: 200 SKDYKLRD--RLGTAYY------IAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251
Query: 336 IAESLSEEEIAGL--------------KEMFK-MIDTDNSGYITLEEL--KKGLQRVGAN 378
+ + + E KE+ K M+ D + T EE + +++ N
Sbjct: 252 DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFI--AAML----HLNKIQREDHMYAAFSYFDKDGS 432
+ S+ L G + N + + + AA+L L ++ + F DK+G
Sbjct: 312 INKSDQKTL--CGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGD 369
Query: 433 GYITPDEL---QTACQQFGLD-------DTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
G + EL + F + + ++++I++EVD D +G I+YSEF+++ D
Sbjct: 370 GQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMD 427
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 291 WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKE 350
W++ + K Q L L GS + A+ IG ++ + EE L +
Sbjct: 304 WIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLT----TLEERKELTD 359
Query: 351 MFKMIDTDNSGYITLEELKKG---LQRVGANL-----MDSEIDGLMQAGDIDNSGTMDYG 402
+FK +D + G + +EL +G L+ L ++ E+D +++ D D +G ++Y
Sbjct: 360 IFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYS 419
Query: 403 EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVD 462
EFI+ + + E+ + AF+ FD D SG IT +EL + + D++ E D
Sbjct: 420 EFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEAD 479
Query: 463 QDNDGRIDYSEFVAMMQ 479
Q+ D ID+ EFV+MM
Sbjct: 480 QNKDNMIDFDEFVSMMH 496
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 116 GSVLG---RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX 172
G+V G ++ +++++Y LG G F L +K TQK A K IAK+ L
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 173 XXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H HPN++ + YE ++++M+L +GGELFDRI+++G YTER A+
Sbjct: 63 MENEIA---VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
L ++ V+ H LG++HRDLKPEN L+ + E++ + DFGLS PG
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 115 VGSVLG---RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXX 171
+G+V G ++ +++++Y LG G F L +K TQK A K IAK L
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 172 XXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA 231
+ H HPN++ + YE ++++M+L +GGELFDRI+++G YTER A
Sbjct: 62 SMENEIA---VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ L ++ V+ H LG++HRDLKPEN L+ + E++ + DFGLS PG
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 115 VGSVLG---RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXX 171
+G+V G ++ +++++Y LG G F L +K TQK A K IAK L
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 172 XXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA 231
+ H HPN++ + YE ++++M+L +GGELFDRI+++G YTER A
Sbjct: 62 SMENEIA---VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ L ++ V+ H LG++HRDLKPEN L+ + E++ + DFGLS PG
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 115 VGSVLG---RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXX 171
+G+V G ++ +++++Y LG G F L +K TQK A K IAK L
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 172 XXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA 231
+ H HPN++ + YE ++++M+L +GGELFDRI+++G YTER A
Sbjct: 62 SMENEIA---VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ L ++ V+ H LG++HRDLKPEN L+ + E++ + DFGLS PG
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
Query: 114 QVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXX 173
+ S ++ ++K+++ LG G F L EKAT K FA K I K+ L
Sbjct: 8 ESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI 67
Query: 174 XXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAD 233
H N++ + YE +++VM+L +GGELFDRI+++G YTE+ A+
Sbjct: 68 ENEIAVLRK---IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST 124
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L R ++ V H +G++HRDLKPEN L+ +Q EE+ + DFGLS
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G L + + + +LG+G + C +K TQK +A K + K
Sbjct: 45 GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVRTEI 99
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L+ HPN+I++ +E + +V+EL GGELFDRI+++G+Y+ER AAD + I+
Sbjct: 100 GVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL 158
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V H G++HRDLKPEN L+ +APLK DFGLS
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
D+ +AE LSEEEI GLKE+FKMIDTDNSG IT +ELK GL+RVG+ LM+SEI LM A D
Sbjct: 10 DKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD 69
Query: 393 IDNSGTMDYGEFIAAMLH 410
ID SGT+DYGEFIAA +H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVA 476
F D D SG IT DEL+ ++ G L +++++D++ D D G IDY EF+A
Sbjct: 29 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 83
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 168/400 (42%), Gaps = 51/400 (12%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L + Y +KLG G +G LC +K T E A K I K + + L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
HPN++++ +ED ++VME+ GGELFD II R ++E AA + + ++
Sbjct: 62 -DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLHFLFFQKQRQS 305
H ++HRDLKPEN L ++ +A +K +DFGLS F G + RL ++
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RLGTAYY------ 172
Query: 306 VLQTRLVRNLNEPGSLWPDKVAV-------PPIGDRVIAESLSEEEIAGL---------- 348
+ L + +E +W V + PP G + E L E
Sbjct: 173 IAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 349 ----KEMFK-MIDTDNSGYITLEE-LKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
K++ K M+ + S I+ EE L + +++ G + N
Sbjct: 233 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSS 292
Query: 403 EFI--AAML----HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--------- 447
+ + AAML L ++ + F D +G G + EL ++
Sbjct: 293 QKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVS 352
Query: 448 GLDDTQLE----DIIREVDQDNDGRIDYSEFVAMMQDSGL 483
LD +Q+E I++ VD D +G I+YSEFV + D L
Sbjct: 353 DLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQL 392
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----------GANLMDSEIDGLMQAG 391
EE L ++F+ +D + G + +EL +G +++ ++ +++E+D ++Q+
Sbjct: 311 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 370
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDD 451
D D +G ++Y EF+ + + + + AAF FD DGSG IT +EL +DD
Sbjct: 371 DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDD 430
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+++E D++NDG +D+ EFV MMQ
Sbjct: 431 ETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG+G F CV K + + FA K I+KR + GHPN+++
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVK 70
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ + D + +VMEL GGELF+RI ++ H++E +A+ + R +V V H +GV+HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
DLKPEN LF ++ + +K IDFG + P
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPP 161
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G + T + Y R LG+G FG LC +K T +E A K I+KR++
Sbjct: 14 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN++++ +ED ++V E+ GGELFD II R ++E AA +
Sbjct: 74 LREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
R ++ + H ++HRDLKPEN L ++ ++A ++ IDFGLS F
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV------GANLMDS-----EIDGLMQ 389
S++E L +F +D + G + EL +G + + A+++D+ E+D ++
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 389
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL 449
A D D +G ++Y EF+ + + + + AF FD D SG I+ EL T +
Sbjct: 390 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 449
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D + ++ EVD++NDG +D+ EF M+
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 406 AAMLHL-NKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQF----GLDDTQLE-- 455
AA+L++ +K+ +D + A F DK+G G + EL ++ G D + L+
Sbjct: 319 AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378
Query: 456 -------DIIREVDQDNDGRIDYSEFVAMMQD 480
++ VD D +G I+YSEFV + D
Sbjct: 379 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMD 410
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G + T + Y R LG+G FG LC +K T +E A K I+KR++
Sbjct: 38 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 97
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN++++ +ED ++V E+ GGELFD II R ++E AA +
Sbjct: 98 LREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 156
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
R ++ + H ++HRDLKPEN L ++ ++A ++ IDFGLS F
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 203
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV------GANLMDS-----EIDGLMQ 389
S++E L +F +D + G + EL +G + + A+++D+ E+D ++
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 413
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL 449
A D D +G ++Y EF+ + + + + AF FD D SG I+ EL T +
Sbjct: 414 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 473
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D + ++ EVD++NDG +D+ EF M+
Sbjct: 474 DSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 406 AAMLHL-NKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQF----GLDDTQLE-- 455
AA+L++ +K+ +D + A F DK+G G + EL ++ G D + L+
Sbjct: 343 AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 402
Query: 456 -------DIIREVDQDNDGRIDYSEFVAMMQD 480
++ VD D +G I+YSEFV + D
Sbjct: 403 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMD 434
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G + T + Y R LG+G FG LC +K T +E A K I+KR++
Sbjct: 37 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 96
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN++++ +ED ++V E+ GGELFD II R ++E AA +
Sbjct: 97 LREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 155
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
R ++ + H ++HRDLKPEN L ++ ++A ++ IDFGLS F
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 202
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV------GANLMDS-----EIDGLMQ 389
S++E L +F +D + G + EL +G + + A+++D+ E+D ++
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 412
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL 449
A D D +G ++Y EF+ + + + + AF FD D SG I+ EL T +
Sbjct: 413 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 472
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D + ++ EVD++NDG +D+ EF M+
Sbjct: 473 DSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 406 AAMLHL-NKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQF----GLDDTQLE-- 455
AA+L++ +K+ +D + A F DK+G G + EL ++ G D + L+
Sbjct: 342 AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 401
Query: 456 -------DIIREVDQDNDGRIDYSEFVAMMQD 480
++ VD D +G I+YSEFV + D
Sbjct: 402 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMD 433
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G + T + Y R LG+G FG LC +K T +E A K I+KR++
Sbjct: 14 GXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN+ ++ +ED ++V E+ GGELFD II R ++E AA +
Sbjct: 74 LREVQLLKQL-DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
R ++ + H ++HRDLKPEN L ++ ++A ++ IDFGLS F
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----------GANLMDSEIDGLMQ 389
S++E L +F D + G + EL +G + + A+ ++ E+D ++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL 449
A D D +G ++Y EF+ + + + AF FD D SG I+ EL T +
Sbjct: 390 AVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDV 449
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEF 474
D + ++ EVD++NDG +D+ EF
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 406 AAMLHL-NKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQF----GLDDTQLE-- 455
AA+L+ +K+ +D + A F DK+G G + EL ++ G D + L+
Sbjct: 319 AALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDAS 378
Query: 456 -------DIIREVDQDNDGRIDYSEFVAMMQD 480
++ VD D +G I+YSEFV + D
Sbjct: 379 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXD 410
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G + T + Y R LG+G FG LC +K T +E A K I+KR++
Sbjct: 20 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 79
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN++++ +ED ++V E+ GGELFD II R ++E AA +
Sbjct: 80 LREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 138
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
R ++ + H ++HRDLKPEN L ++ ++A ++ IDFGLS F
Sbjct: 139 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 185
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH 183
G E Y++ LG+G FG C ++ TQ+E+A K I K +
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI--NKASAKNKDTSTILREVELL 75
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++++ ED+ + ++V EL GGELFD II+R ++E AA + + + +
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
H ++HRDLKPEN L +++++ +K IDFGLS F+
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 18/155 (11%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKG---------------LQRVGANLMDSEIDGL 387
+E L E+F+ +DT+N G + +EL +G +Q G+ + D +ID L
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIED-QIDSL 386
Query: 388 MQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
M D+D SG+++Y EFIA+ + + + M AF FDKDGSG I+ EL Q
Sbjct: 387 MPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA 446
Query: 448 --GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ +LE II +VD + DG +D++EFV M+Q+
Sbjct: 447 DSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 4/165 (2%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
+T N+++ + LG G F FL ++ T K FA K I K
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ H N++ + YE ++VM+L +GGELFDRI++RG YTE+ A+ + + ++
Sbjct: 63 I----KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA 118
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286
V+ H G++HRDLKPEN L++ +E + + DFGLS + G+
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH 183
G E Y++ LG+G FG C ++ TQ+E+A K I K +
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI--NKASAKNKDTSTILREVELL 75
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++++ ED+ + ++V EL GGELFD II+R ++E AA + + + +
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
H ++HRDLKPEN L +++++ +K IDFGLS F+
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH 183
G E Y++ LG+G FG C ++ TQ+E+A K I K +
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI--NKASAKNKDTSTILREVELL 75
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++++ ED+ + ++V EL GGELFD II+R ++E AA + + + +
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
H ++HRDLKPEN L +++++ +K IDFGLS F+
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 398 TMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M K E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ + L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ + L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMM 409
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMM 437
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID 394
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 395 NSGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMM 445
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++ +IRE D D DG+++Y EFV MM
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMM 146
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
GT+D+ EF+ M K E+ + AF FDKDG+G+I+ EL+ G L D ++
Sbjct: 61 GTIDFPEFLTMMARKMK-DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMM 143
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
AE L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLHLNKIQ-REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF++ M K Q E+ + AF FD+DG+G I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG I+Y EFV MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + E SEEE L E FK+ D D +G I+ EL+ + +G L D E+D +++ DI
Sbjct: 74 RKMKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 131 DGDGHINYEEFVRMMV 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE + D DG+++Y EFV MM
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 400 DYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++++
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+IRE D D DG+++Y EFV MM
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 400 DYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+IRE D D DG+++Y EFV MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 400 DYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+IRE D D DG+++Y EFV MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L + Y +KLG G +G LC +K T E A K I K + + L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
HPN++++ +ED ++VME+ GGELFD II R ++E AA + + ++
Sbjct: 79 -DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
H ++HRDLKPEN L ++ +A +K +DFGLS F G
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D ++
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG+++Y EFV MM
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMM 144
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLHLNKIQ-REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF++ M K Q E+ + AF FD+DG+G I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG I+Y EFV MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + E SEEE L E FK+ D D +G I+ EL+ + +G L D E+D +++ DI
Sbjct: 74 RKMKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 131 DGDGHINYEEFVRMMV 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 85/143 (59%), Gaps = 3/143 (2%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
+ +EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 399 MDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +++
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 456 DIIREVDQDNDGRIDYSEFVAMM 478
++IRE D D DG+++Y EFV MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+D
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 401 YGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI 457
+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D +++++
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 458 IREVDQDNDGRIDYSEFVAMM 478
IRE D D DG+++Y EFV MM
Sbjct: 121 IREADIDGDGQVNYEEFVQMM 141
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG G+F C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V ++ EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N+ + Y G +LG G F C EK+T ++A K I KR+ +
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 185 LA--GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I+ V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
HSL + H DLKPEN + +++ P +K IDFGL+
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 110 SAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXX 169
S+G+ +G+ +++ Y +G +LG GQF C +K T KE+A K I KR+L
Sbjct: 8 SSGVDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSS 67
Query: 170 XXXXXXXXXXXXMHHL--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYT 227
++ L HPN+I + +E+ V +++EL +GGELFD + ++ T
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT 127
Query: 228 ERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGL 286
E +A + I+ V HS + H DLKPEN + +++ P +K IDFG++ G
Sbjct: 128 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 287 TFR 289
F+
Sbjct: 188 EFK 190
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L++E+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEE LKE F++ D D +G+I+ EL+ + +G L D E+D +++ D+
Sbjct: 74 RKMKDTDSEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 131 DGDGQVNYEEFVQVMM 146
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+D
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 401 YGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDII 458
+ EF+ M K + + AF FDKDG+GYI+ EL+ G L D +++++I
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 459 REVDQDNDGRIDYSEFVAMM 478
RE + D DG+++Y EFV MM
Sbjct: 121 REANIDGDGQVNYEEFVQMM 140
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEE ++E F++ D D +GYI+ EL+ + +G L D E+D +++ +I
Sbjct: 70 RKMKDTDSEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 125
Query: 394 DNSGTMDYGEFIAAM 408
D G ++Y EF+ M
Sbjct: 126 DGDGQVNYEEFVQMM 140
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L++E+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG+++Y EFV +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEE+ LKE F++ D D +G+I+ EL+ + +G L D E+D +++ D+
Sbjct: 74 RKMKDTDSEEK---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 131 DGDGQVNYEEFVQVMM 146
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
++++ Y +G +LG GQF C +K T KE+A K I KR+L ++
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 185 L--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPN+I + +E+ V +++EL +GGELFD + ++ TE +A + I+ V
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
HS + H DLKPEN + +++ P +K IDFG++ G F+
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 176
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
+++ Y +G +LG GQF C +K T KE+A K I KR+L ++ L
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 186 --AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN+I + +E+ V +++EL +GGELFD + ++ TE +A + I+ V
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
HS + H DLKPEN + +++ P +K IDFG++ G F+
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 169
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G LG + + MY L +LG+G F CV+ +E+A K I +KL
Sbjct: 10 GVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE 69
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ L HPN++++ + + +++ +L GGELF+ I+ R +Y+E A+
Sbjct: 70 REAR--ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI 127
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ I+ V CH +GV+HRDLKPEN L ++ + A +K DFGL++
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L R + + Y + +G G + C+ KAT EFA K I K K
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEE 65
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
+ HPN+I + Y+D V+VV EL GGEL D+I+++ ++ER+A+ + I
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFFR 283
VE H+ GV+HRDLKP N L++++ ++ DFG + R
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH 183
G + +++ RKLG G FG L E+++ E K+I K + +
Sbjct: 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVL 74
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ---RGH-YTERKAADLTRIIV 239
HPN+I+I +ED +++VME C GGEL +RI+ RG +E A+L + ++
Sbjct: 75 KSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+ HS V+H+DLKPEN LF + +P+K IDFGL+ F+
Sbjct: 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L R + + Y + +G G + C+ KAT EFA K I K K
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEE 65
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
+ HPN+I + Y+D V+VV EL GGEL D+I+++ ++ER+A+ + I
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFFR 283
VE H+ GV+HRDLKP N L++++ ++ DFG + R
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K +++ Y +G +LG GQF C EK+T E+A K I KR+
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 182 MHHLAG--HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L HPN+I + YE+ V +++EL +GGELFD + Q+ +E +A + I+
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L++E+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 400 DYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + E+ + AF FDKDG+G+I+ EL+ G L D ++++
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+IRE D D DG+++Y EFV +M
Sbjct: 121 MIREADVDGDGQVNYEEFVQVM 142
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEE LKE F++ D D +G+I+ EL+ + +G L D E+D +++ D+
Sbjct: 71 RKMKDTDSEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 128 DGDGQVNYEEFVQVMM 143
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE++ KE F + D D G IT EL ++ +G N ++E+ +M D D +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ M + E+ + AF FDKDG+G+++ EL+ + G L D +
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IR D D DG+++Y EFV ++
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ +EEEI +E F++ D D +G+++ EL+ + R+G L D E+D +++A D
Sbjct: 74 RKMKDTDNEEEI---REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADT 130
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ ++
Sbjct: 131 DGDGQVNYEEFVRVLV 146
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ LSEE+I KE F + D D G IT+EEL ++ + N + E+ ++ D D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 397 GTMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+++ EF++ M + E+ + AF FDKD +GYI+ EL+ G L D +
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
+E +I+E D D DG+++Y EFV MM
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ ++ +EEE LKE FK+ D D +GYI+ EL+ + +G L D E++ +++ D+D
Sbjct: 76 VKDTDAEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG 132
Query: 396 SGTMDYGEFIAAMLHL 411
G ++Y EF+ M+ +
Sbjct: 133 DGQVNYEEFVKMMMTV 148
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+E++I+ KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKD +G+I+ EL+ G L D
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+I+Y EFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVM 146
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEE LKE F++ D D +G+I+ EL+ + +G L D E+D +++ D+
Sbjct: 75 RKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 132 DGDGQINYDEFVKVMM 147
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K +++ Y +G +LG GQF C EK+T E+A K I KR+
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 182 MHHL--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L H NVI + YE+ V +++EL +GGELFD + Q+ +E +A + I+
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K +++ Y +G +LG GQF C EK+T E+A K I KR+
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 182 MHHL--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L H NVI + YE+ V +++EL +GGELFD + Q+ +E +A + I+
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K +++ Y +G +LG GQF C EK+T E+A K I KR+
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 182 MHHL--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L H NVI + YE+ V +++EL +GGELFD + Q+ +E +A + I+
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K +++ Y +G +LG GQF C EK+T E+A K I KR+
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 182 MHHL--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L H NVI + YE+ V +++EL +GGELFD + Q+ +E +A + I+
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +G G + CV KAT E+A K I K K + HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+I + Y+D V++V EL GGEL D+I+++ ++ER+A+ + I VE HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 250 VMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFFR 283
V+HRDLKP N L++++ L+ DFG + R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K +++ Y +G +LG GQF C EK+T E+A K I KR+
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 182 MHHL--AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L H NVI + YE+ V +++EL +GGELFD + Q+ +E +A + I+
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFR 289
V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +G G + CV KAT E+A K I K K + HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+I + Y+D V++V EL GGEL D+I+++ ++ER+A+ + I VE HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 250 VMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFFR 283
V+HRDLKP N L++++ L+ DFG + R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL + +G N ++E+ + D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 397 GTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ K E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFV 475
+++ IRE D D DG+++Y EFV
Sbjct: 121 VDEXIREADIDGDGQVNYEEFV 142
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L++++I+ KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKD +G+I+ EL+ G L D
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+I+Y EFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVM 146
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEE LKE F++ D D +G+I+ EL+ + +G L D E+D +++ D+
Sbjct: 75 RKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 132 DGDGQINYEEFVKVMM 147
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +LG+G F CV K T EFA K I +KL + HP
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR--ICRKLQHP 88
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + ++ ++V +L GGELF+ I+ R Y+E A+ + I+ + CHS G
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
++HR+LKPEN L ++ + A +K DFGL++
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL + +G N ++E+ + D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 397 GTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+++ EF+ K E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFV 475
+++ IRE D D DG+++Y EFV
Sbjct: 121 VDEXIREADIDGDGQVNYEEFV 142
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
++ + Y L +LG+G F C++ T +E+A K I +KL +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREAR--ICR 58
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
L HPN++++ + + ++V +L GGELF+ I+ R +Y+E A+ + I+ V
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
CH G++HRDLKPEN L ++ + A +K DFGL++
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL + +G N ++E+ + D D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 397 GTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF+ K E+ + AF FDKDG+GYI+ EL+ G L D +
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 454 LEDIIREVDQDNDGRIDYSEFV 475
++ IRE D D DG+++Y EFV
Sbjct: 122 VDQXIREADIDGDGQVNYEEFV 143
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +LG+G F CV K T EFA K I +KL + HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR--ICRKLQHP 65
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + ++ ++V +L GGELF+ I+ R Y+E A+ + I+ + CHS G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
++HR+LKPEN L ++ + A +K DFGL++
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +LG+G F CV K T EFA K I +KL + HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR--ICRKLQHP 65
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + ++ ++V +L GGELF+ I+ R Y+E A+ + I+ + CHS G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
++HR+LKPEN L ++ + A +K DFGL++
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +LG+G F CV K T EFA K I +KL + HP
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR--ICRKLQHP 64
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + ++ ++V +L GGELF+ I+ R Y+E A+ + I+ + CHS G
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
++HR+LKPEN L ++ + A +K DFGL++
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
++ + Y L +LG+G F C++ T +E+A K I +KL +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREAR--ICR 58
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
L HPN++++ + + ++V +L GGELF+ I+ R +Y+E A+ + I+ V
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
CH G++HRDLKPEN L ++ + A +K DFGL++
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID 394
+IA+ ++ ++ LK F ++D D GYIT E+LKKGL++ G L D L+ D D
Sbjct: 41 IIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKL-PYNFDLLLDQIDSD 99
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------ 448
SG +DY EFIAA L ++ ++ +Y AF FD D G IT EL
Sbjct: 100 GSGKIDYTEFIAAALDRKQLSKK-LIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNIT 158
Query: 449 -LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
D +++ +IR+VD++NDG+ID+ EF MM+
Sbjct: 159 QRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLD-DTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ F D+DG GYIT ++L+ ++ GL + ++ ++D D G+IDY+EF+A D
Sbjct: 56 STFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALD 115
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT ++L ++ +G N ++E+ ++ D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 398 TMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
T+D+ +F+ M + E+ + AF F KDG+GYI+ +L+ G L D ++
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D DG+++Y +FV MM
Sbjct: 423 DEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G++ +K E + +GR LG+G+FG +L EK ++ A K + K +L
Sbjct: 1 GAMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
HL HPN++++ G + DA V++++E GE++ + + + E++ A
Sbjct: 61 RREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ + CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
++ + Y L +G+G F CV+ T E+A K I +KL +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREAR--ICR 58
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
L H N++++ + + ++V +L GGELF+ I+ R +Y+E A+ + I+ V
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
CH +GV+HRDLKPEN L ++ + A +K DFGL++
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E Y L +LG+G F CV+ +E+A I +KL + L
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR--ICRLLK 68
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ + + +++ +L GGELF+ I+ R +Y+E A+ + I+ V CH
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+GV+HR+LKPEN L ++ + A +K DFGL++
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G++ +K E + +GR LG+G+FG +L EK ++ A K + K +L
Sbjct: 1 GAMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
HL HPN++++ G + DA V++++E GE++ + + + E++ A
Sbjct: 61 RREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ + CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
L+EE+IA K+ F D + +G I EL ++ +G N ++E+ L+ + +N+G
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQ 62
Query: 399 MDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
+++ EF M + + E+ M AF FD+DG G+I+P EL+ G + D +++
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 456 DIIREVDQDNDGRIDYSEFVAMM 478
++IRE D D DG I+Y EFV M+
Sbjct: 123 EMIREADFDGDGMINYEEFVWMI 145
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
E+ +EEE ++E FK+ D D G+I+ EL+ + +G + D EID +++ D D G
Sbjct: 78 ETDTEEE---MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDG 134
Query: 398 TMDYGEFI 405
++Y EF+
Sbjct: 135 MINYEEFV 142
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
GS + +K E + +GR LG+G+FG +L EK ++ A K + K +L
Sbjct: 1 GSHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
HL HPN++++ G + DA V++++E G ++ + + + E++ A
Sbjct: 61 RREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ + CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G + +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 104/189 (55%), Gaps = 16/189 (8%)
Query: 297 LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMID 356
L+FQ + L + L++NL + + + I +IA+ L + EI L+ +F +D
Sbjct: 14 LYFQGHVE--LSSTLLKNLKN----FKKENELKKIALTIIAKHLCDVEINNLRNIFIALD 67
Query: 357 TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416
DNSG ++ +E+ GL+++G + +I +++ D + SG + Y +F+AA + +
Sbjct: 68 VDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLK 127
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ-------LEDIIREVDQDNDGRI 469
++ F +FD DG+G I+ +EL+ FG DD + ++ +++EVD + DG I
Sbjct: 128 KEVCLIPFKFFDIDGNGKISVEELKRI---FGRDDIENPLIDKAIDSLLQEVDLNGDGEI 184
Query: 470 DYSEFVAMM 478
D+ EF+ MM
Sbjct: 185 DFHEFMLMM 193
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 38/118 (32%)
Query: 367 ELKK-GLQRVGANLMDSEIDGLMQ---AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422
ELKK L + +L D EI+ L A D+DNSGT+ E + +
Sbjct: 38 ELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGL-------------- 83
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
K G I PD + ++R++D + G+I Y++F+A D
Sbjct: 84 -----KKIGYQKIPPD---------------IHQVLRDIDSNASGQIHYTDFLAATID 121
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L +LG+G F CV+K +E+A K I +KL + L HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR--ICRLLKHP 90
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + + ++V +L GGELF+ I+ R +Y+E A+ I+ V H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
++HRDLKPEN L ++ + A +K DFGL++
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+++EL ++ +G E+D +++ D D SGT+
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FD++ GYI +EL + G + D +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+E ++++ D++NDGRID+ EF+ MM+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 102 PAHVKRISSAGLQVGS--------VLGRKTGNLKEMYSLGRK--LGQGQFGTTFLCVEKA 151
P KR S+ + + + ++ K G + Y++ + LG G+FG C E A
Sbjct: 53 PVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETA 112
Query: 152 TQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211
T + A K I R + M+ L H N+IQ+ A+E + +VME
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEISV---MNQL-DHANLIQLYDAFESKNDIVLVMEYV 168
Query: 212 AGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270
GGELFDRII + TE + I + H + ++H DLKPEN L +N+ +
Sbjct: 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQ- 227
Query: 271 LKTIDFGLSMFFRPGLTFRV 290
+K IDFGL+ ++P +V
Sbjct: 228 IKIIDFGLARRYKPREKLKV 247
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G+K E + +GR LG+G+FG +L EK ++ A K + K +L
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
HL HPN++++ G + DA V++++E G ++ + + + E++ A +
Sbjct: 61 EIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ CHS V+HRD+KPEN L + E LK DFG S
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 156
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
+ +L+EE+IA KE F + D DN+G I+ EL ++ +G + ++E++ LM D+D +
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 397 GTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
+++ EF+A M L E + AF FDK+G G I+ EL+ G L D +
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++D++REV D G I+ +F A++
Sbjct: 122 VDDMLREV-SDGSGEINIQQFAALL 145
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+++EL ++ +G E+D +++ D D SGT+
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 400 DYGEFIAAMLHLNKI----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FD++ GYI +EL + G + D +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+E ++++ D++NDGRID+ EF+ MM+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
LG K E + +GR LG+G+FG +L E+ ++ A K + K +L
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
HL HPN++++ G + DA V++++E G ++ + + + E++ A +
Sbjct: 63 VEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSV 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
LG K E + +GR LG+G+FG +L E+ ++ A K + K +L
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
HL HPN++++ G + DA V++++E G ++ + + + E++ A +
Sbjct: 63 VEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSV 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 92
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 153 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 182
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 92
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 153 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 182
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 118 VLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXX 177
+G K E + +GR LG+G+FG +L EK ++ A K + K +L
Sbjct: 2 AMGSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 178 XXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
HL HPN++++ G + DA V++++E G ++ + + + E++ A
Sbjct: 62 EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ + CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 160
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G++ +K E + +GR LG+G+FG +L EK ++ A K + K +L
Sbjct: 1 GAMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
HL HPN++++ G + DA V++++E G ++ + + + E++ A
Sbjct: 61 RREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ + CHS V+HRD+KPEN L + E LK DFG S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 83
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 144 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 173
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 68
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 158
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 157
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 157
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 71
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 65
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 126 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 155
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--------LMDSEIDGLMQAGD 392
S+EE L ++F+ ID + G + +EL G ++ ++SE+D ++ A D
Sbjct: 58 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 117
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
D +G +DY EF+ + + +D + +AF FD+DG+G I+ DEL + FGLD
Sbjct: 118 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGLDHL 174
Query: 453 Q---LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ +++I +D +NDG +D+ EF M+Q
Sbjct: 175 ESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 204
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 424 FSYFDKDGSGYITPDEL----------QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSE 473
F + DK+G G + EL + A +++++ I+ D D +G IDYSE
Sbjct: 69 FRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSE 128
Query: 474 FVAMMQD 480
FV + D
Sbjct: 129 FVTVAMD 135
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
+ +L+EE+IA KE F + D DN+G I+ EL ++ +G + ++E++ LM D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 397 GTMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
+++ EF+A M L E + AF FDK+G G I+ EL+ G L D +
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++D++REV D G I+ +F A++
Sbjct: 121 VDDMLREV-SDGSGEINIQQFAALL 144
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----------GANLMDSEIDGLMQAG 391
EE L ++F+ +D + G + +EL +G +++ ++ +++E+D ++Q+
Sbjct: 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 96
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDD 451
D D +G ++Y EF+ + + + + AAF FD DGSG IT +EL +DD
Sbjct: 97 DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDD 156
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+++E D++NDG +D+ EFV MMQ
Sbjct: 157 ETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Query: 406 AAML----HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---------GLDDT 452
AAML L ++ + F D +G G + EL ++ LD +
Sbjct: 24 AAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS 83
Query: 453 QLE----DIIREVDQDNDGRIDYSEFVAMMQDSGL 483
Q+E I++ VD D +G I+YSEFV + D L
Sbjct: 84 QIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQL 118
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 8/148 (5%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++++L+EE+IA KE F + D DNSG I+ EL ++ +G + ++E+ LM D+D
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 396 SGTMDYGEFIAAM---LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
+ +++ EF+A M L N ++E + AF FDK+G G I+ EL+ G L
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQE--LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 118
Query: 451 DTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D ++++++REV D G I+ +F A++
Sbjct: 119 DAEVDEMLREV-SDGSGEINIKQFAALL 145
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ +GR LG+G+FG +L EK + A K + K +L HL HP
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + D +++++E GEL+ + + G + E+++A + + CH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSV 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ +GR LG+G+FG +L EK + A K + K +L HL HP
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + D +++++E GEL+ + + G + E+++A + + CH
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 136 VIHRDIKPENLLMGYKGE---LKIADFGWSV 163
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + D+ V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 127 KKVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+ ++E F + DTD SG I +ELK ++ +G EI ++ D D SGT+
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + + + + AF FD D SG IT +L+ ++ G L + +L++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 457 IIREVDQDNDGRIDYSEFVAMMQDSGL 483
+I E D+++D ID EF+ +M+ + L
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK + A K + K +L HL
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 124 KRVIHRDIKPENLLLGSAGE---LKIADFGWSV 153
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 68
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK +FG S+
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIANFGWSV 158
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L HL
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK +FG S+
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIANFGWSV 159
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 35/189 (18%)
Query: 103 AHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI- 161
+HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 2 SHVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ 52
Query: 162 ----AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCA 212
A+R++ +H A P++++IV YE+ A + +VME
Sbjct: 53 DCPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98
Query: 213 GGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270
GGELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 271 LKTIDFGLS 279
LK DFG +
Sbjct: 159 LKLTDFGFA 167
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI------AKRKLXXXXXXXXXX 176
T E Y LG+G C+ K T KE+A K I +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 177 XXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
+ ++GHPN+IQ+ YE +V +L GELFD + ++ +E++ + R
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
++ V+ A H L ++HRDLKPEN L ++ +K DFG S PG R
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLR 181
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI------AKRKLXXXXXXXXXX 176
T E Y LG+G C+ K T KE+A K I +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 177 XXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
+ ++GHPN+IQ+ YE +V +L GELFD + ++ +E++ + R
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
++ V+ A H L ++HRDLKPEN L ++ +K DFG S PG R
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLR 181
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 35/189 (18%)
Query: 103 AHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 2 PHVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ 52
Query: 162 ----AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCA 212
A+R++ +H A P++++IV YE+ A + +VME
Sbjct: 53 DCPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98
Query: 213 GGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270
GGELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 271 LKTIDFGLS 279
LK DFG +
Sbjct: 159 LKLTDFGFA 167
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 2 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 52
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 53 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 98
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 99 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 158
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 159 KLTDFGFA 166
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 1 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 51
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 52 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 97
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 157
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 158 KLTDFGFA 165
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 8 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 58
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 59 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 104
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 105 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 164
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 165 KLTDFGFA 172
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 3 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 53
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 54 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 159
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 160 KLTDFGFA 167
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI------AKRKLXXXXXXXXXXXXXXX 181
E Y LG+G C+ K T KE+A K I +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ ++GHPN+IQ+ YE +V +L GELFD + ++ +E++ + R ++ V
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+ A H L ++HRDLKPEN L ++ +K DFG S PG R
Sbjct: 124 ICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLR 168
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 17 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 67
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 68 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 113
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 114 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 173
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 174 KLTDFGFA 181
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 1 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 51
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 52 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 97
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 157
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 158 KLTDFGFA 165
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 7 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 57
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 58 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 103
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 104 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 163
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 164 KLTDFGFA 171
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 111 AGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-----AKRK 165
+GLQ+ +K + + + LG G G K TQ++FA K + A+R+
Sbjct: 50 SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE 104
Query: 166 LXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAGGELFDRI 220
+ +H A P++++IV YE+ A + +VME GGELF RI
Sbjct: 105 VE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 150
Query: 221 IQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A LK DFG
Sbjct: 151 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210
Query: 279 S 279
+
Sbjct: 211 A 211
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 35/188 (18%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-- 161
HVK +GLQ+ +K + + + LG G G K TQ++FA K +
Sbjct: 9 HVK----SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD 59
Query: 162 ---AKRKLXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAG 213
A+R++ +H A P++++IV YE+ A + +VME G
Sbjct: 60 CPKARREVE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 105
Query: 214 GELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELF RI RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A L
Sbjct: 106 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 165
Query: 272 KTIDFGLS 279
K DFG +
Sbjct: 166 KLTDFGFA 173
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 111 AGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-----AKRK 165
+GLQ+ +K + + + LG G G K TQ++FA K + A+R+
Sbjct: 56 SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE 110
Query: 166 LXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAGGELFDRI 220
+ +H A P++++IV YE+ A + +VME GGELF RI
Sbjct: 111 VE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 156
Query: 221 IQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A LK DFG
Sbjct: 157 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 216
Query: 279 S 279
+
Sbjct: 217 A 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K G++ + Y + +LG G FG CVEKAT + F K I
Sbjct: 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ 104
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVG 240
+H HP +I + A+ED + +++E +GGELFDRI + +E + + R
Sbjct: 105 LH----HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 160
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ H ++H D+KPEN + ++ + +K IDFGL+ P +V
Sbjct: 161 GLKHMHEHSIVHLDIKPENIM-CETKKASSVKIIDFGLATKLNPDEIVKV 209
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACK--SIAKRKLXXXXXXXXXXXXXXXMH---HLAGHPN 190
+G+G CV +AT EFA K + +L H +AGHP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV 250
+I ++ +YE + + +V +L GELFD + ++ +E++ + R ++ V H+ +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+HRDLKPEN L + + ++ DFG S PG R
Sbjct: 222 VHRDLKPENILLDDNMQ---IRLSDFGFSCHLEPGEKLR 257
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID 394
+IA+ ++ ++ LK F +D + G IT +L+KGL+R G ++ D L+ D D
Sbjct: 44 IIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGL-MLPPNFDLLLDQIDSD 102
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTAC---QQFG--- 448
SG +DY EF+AA + ++ ++ +Y AF FD D G IT EL + G
Sbjct: 103 GSGNIDYTEFLAAAIDRRQLSKK-LIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNIT 161
Query: 449 -LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
D Q++ +IREVD++ DG+ID+ EF MM+
Sbjct: 162 ERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G GN Y + + LG+G FG L T ++ A K I K+ L
Sbjct: 10 GAHIGN----YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 65
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L HP++I++ + + +V+E AG ELFD I+QR +E++A + I+
Sbjct: 66 SYLR-LLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
VE CH ++HRDLKPEN L E +K DFGLS
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLS 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G GN Y + + LG+G FG L T ++ A K I K+ L
Sbjct: 9 GAHIGN----YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 64
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L HP++I++ + + +V+E AG ELFD I+QR +E++A + I+
Sbjct: 65 SYLR-LLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
VE CH ++HRDLKPEN L E +K DFGLS
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLS 159
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G GN Y + + LG+G FG L T ++ A K I K+ L
Sbjct: 4 GAHIGN----YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 59
Query: 180 XXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ L HP++I++ + + +V+E AG ELFD I+QR +E++A + I+
Sbjct: 60 SYLR-LLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
VE CH ++HRDLKPEN L E +K DFGLS
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLS 154
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T +E A K I K +L + + HP
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVR--IMKILNHP 74
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 135 IVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVG 167
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A K I K +L + + HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVLNHP 73
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFG 166
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A K I K +L + + HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVLNHP 73
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFG 166
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 115 VGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX 174
+GS + L++ Y + + LG G G L E+ T K+ A K I+KRK
Sbjct: 3 LGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREA 62
Query: 175 ----XXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK 230
+ HP +I+I + DA ++V+EL GGELFD+++ E
Sbjct: 63 DPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEAT 121
Query: 231 AADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 122 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + + LG+G FG L T ++ A K I K+ L + L HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHP 64
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ + + +V+E AG ELFD I+QR +E++A + I+ VE CH
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKPEN L E +K DFGLS
Sbjct: 124 IVHRDLKPENLLL---DEHLNVKIADFGLS 150
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ + R LG+G+FG +L EK + A K + K +L HL HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + D +++++E GEL+ + + G + E+++A + + CH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
V+HRD+KPEN L + E LK DFG S+
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSV 162
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXX-XXXXXXXXXXXMHH 184
+++Y L +G+G F C+ + T ++FA K + K + H
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH----YTERKAADLTRIIVG 240
+ HP++++++ Y +++V E G +L I++R Y+E A+ R I+
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ CH ++HRD+KPEN L +++ AP+K DFG+++
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI 181
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A K I K +L + + HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVLNHP 73
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFG 166
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T +E A K I K +L + + HP
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR--IMKILNHP 71
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E ++++ME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 132 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVG 164
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T +E A K I K +L + + HP
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR--IMKILNHP 74
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E ++++ME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVG 167
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A K I K +L + + HP
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVLNHP 66
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 127 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFG 159
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX----XXXXXXX 181
L++ Y + + LG G G L E+ T K+ A K I+KRK
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ HP +I+I + DA ++V+EL GGELFD+++ E ++
Sbjct: 68 ILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX----XXXXXXX 181
L++ Y + + LG G G L E+ T K+ A K I+KRK
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ HP +I+I + DA ++V+EL GGELFD+++ E ++
Sbjct: 68 ILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 31/181 (17%)
Query: 111 AGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-----AKRK 165
+GLQ+ +K + + + LG G G K TQ++FA K + A+R+
Sbjct: 50 SGLQI-----KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARRE 104
Query: 166 LXXXXXXXXXXXXXXXMHHLAGH-PNVIQIVGAYEDAVA----VHVVMELCAGGELFDRI 220
+ +H A P++++IV YE+ A + +V E GGELF RI
Sbjct: 105 VE--------------LHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI 150
Query: 221 IQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
RG +TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A LK DFG
Sbjct: 151 QDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210
Query: 279 S 279
+
Sbjct: 211 A 211
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX----XXXXXXX 181
L++ Y + + LG G G L E+ T K+ A K I+KRK
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ HP +I+I + DA ++V+EL GGELFD+++ E ++
Sbjct: 67 ILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 163
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX----XXXXXXX 181
L++ Y + + LG G G L E+ T K+ A K I+KRK
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ HP +I+I + DA ++V+EL GGELFD+++ E ++
Sbjct: 68 ILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX----XXXXXXX 181
L++ Y + + LG G G L E+ T K+ A + I+KRK
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ HP +I+I + DA ++V+EL GGELFD+++ E ++
Sbjct: 193 ILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX----XXXXXXX 181
L++ Y + + LG G G L E+ T K+ A + I+KRK
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ HP +I+I + DA ++V+EL GGELFD+++ E ++
Sbjct: 207 ILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 265
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+ H G++HRDLKPEN L +Q+E+ +K DFG S
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 303
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A + I K +L + + HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVR--IMKVLNHP 73
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFG 166
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A + I K +L + + HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVR--IMKVLNHP 73
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++VME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFG 166
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Query: 183 HHL--AGHPNVIQIVGAYED----AVAVHVVMELCAGGELFDRIIQRGH--YTERKAADL 234
HH +G P+++ I+ YE+ + ++ME GGELF RI +RG +TER+AA++
Sbjct: 74 HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEI 133
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
R I ++ HS + HRD+KPEN L+ +++++A LK DFG +
Sbjct: 134 MRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + LG+G FG L TQ++ A K I+ R+L L HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ + +V+E AGGELFD I+++ TE + + I+ +E CH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKPEN L + +K DFGLS
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLS 155
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Query: 183 HHL--AGHPNVIQIVGAYED----AVAVHVVMELCAGGELFDRIIQRGH--YTERKAADL 234
HH +G P+++ I+ YE+ + ++ME GGELF RI +RG +TER+AA++
Sbjct: 55 HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEI 114
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
R I ++ HS + HRD+KPEN L+ +++++A LK DFG +
Sbjct: 115 MRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G+G F L T KE A K I K +L + + HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IXKVLNHP 73
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E +++V E +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 134 IVHRDLKAENLLL---DADXNIKIADFGFSNEFTFG 166
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 124 GNLKEMYSLGRKL-GQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
G ++MY L +L G+G + V KE+A K I K+ +
Sbjct: 8 GKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---AGHSRSRVFREVETL 64
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+ G+ N+++++ +ED ++V E GG + I ++ H+ ER+A+ + R + +
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+ H+ G+ HRDLKPEN L + ++ +P+K DF L
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDL 160
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+ ++E F + DTD SG I +ELK ++ +G EI ++ D D SGT+
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + + + + AF FD D +G I+ L+ ++ G + D +L++
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 457 IIREVDQDNDGRIDYSEFVAMMQDSGL 483
+I E D+D DG ++ EF +M+ + L
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F TT L E AT +E+A K + KR +
Sbjct: 9 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHI 68
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 69 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 182
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEIXINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H ++ Q+ E A + +V+E C GGELFD II + +E + + R IV V HS
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G HRDLKPEN LF E LK IDFGL
Sbjct: 127 QGYAHRDLKPENLLF---DEYHKLKLIDFGLC 155
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEIXINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEIXINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E Y + + +G+G FG L KA+QK +A K ++K ++ M A
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 133
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P V+Q+ A++D +++VME GG+L + ++ E+ A T +V ++A HS
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+G++HRD+KP+N L + LK DFG M
Sbjct: 193 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCM 222
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 11 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 70
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 71 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 61
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 122 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 154
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 11 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 70
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 71 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 11 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 70
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 71 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 9 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 68
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 69 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 182
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 9 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 68
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 69 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 182
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 11 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 70
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 71 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 12 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 71
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 72 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 130
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 131 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 185
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 12 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 71
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 72 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 130
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 131 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 185
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 11 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 70
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 71 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 9 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 68
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 69 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 182
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 65
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 126 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 159
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 16 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 75
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 76 IKENKVPYVTRERDVMSRL-DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSF 134
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 135 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 189
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 66
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 160
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 14 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 73
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + GEL I + G +
Sbjct: 74 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 132
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 133 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 187
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 67
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 128 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 161
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 68
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 129 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 162
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 87
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 181
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y LG LG G FG + + T + A K + ++K+ + L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ +VME +GGELFD I + G E +A L + I+ V+ CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
V+HRDLKPEN L K DFGLS G R
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLR 168
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 72
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 133 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 166
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y LG LG G FG + + T + A K + ++K+ + L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ + +VME +GGELFD I + G E+++ L + I+ V+ CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
V+HRDLKPEN L K DFGLS G R
Sbjct: 137 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLR 173
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G +G L V + T++ A K + ++ ++ +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINAMLN 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + G+ LG+G F T L E AT +E+A K + KR + M L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 87
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP +++ ++D ++ + GEL I + G + E T IV +E H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 181
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y LG LG G FG + + T + A K + ++K+ + L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ +VME +GGELFD I + G E +A L + I+ V+ CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRDLKPEN L K DFGLS
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLS 158
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E Y + + +G+G FG L K+T+K +A K ++K ++ M A
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 127
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P V+Q+ A++D +++VME GG+L + ++ E+ A T +V ++A HS
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 186
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+G +HRD+KP+N L + LK DFG M
Sbjct: 187 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCM 216
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E Y + + +G+G FG L K+T+K +A K ++K ++ M A
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 132
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P V+Q+ A++D +++VME GG+L + ++ E+ A T +V ++A HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+G +HRD+KP+N L + LK DFG M
Sbjct: 192 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCM 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E Y + + +G+G FG L K+T+K +A K ++K ++ M A
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 132
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P V+Q+ A++D +++VME GG+L + ++ E+ A T +V ++A HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+G +HRD+KP+N L + LK DFG M
Sbjct: 192 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCM 221
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EE+ ++E F + D D +G I ++ELK ++ +G EI ++ D + +G M+
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 401 YGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI 457
+G+F+ M +++ ++ + AF FD D +G I+ L+ ++ G L D +L+++
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 458 IREVDQDNDGRIDYSEFVAMMQ 479
I E D+D DG + EF+ +M+
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMK 142
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G G L V + T++ A K + ++ ++ +
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLN 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H NV++ G + ++ +E C+GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+G+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXX-XXXXXXXXXXXMHH 184
+++Y L +G+G F C+ + T ++FA K + K + H
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH----YTERKAADLTRIIVG 240
+ HP++++++ Y +++V E G +L I++R Y+E A+ R I+
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ CH ++HRD+KP L +++ AP+K FG+++
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXX-XXXXXXXXXXXMHH 184
+++Y L +G+G F C+ + T ++FA K + K + H
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH----YTERKAADLTRIIVG 240
+ HP++++++ Y +++V E G +L I++R Y+E A+ R I+
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+ CH ++HRD+KP L +++ AP+K FG+++
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 183
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G G FG L +K + + A K I + + H HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-----KIAANVKREIINHRSLRHP 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + +VME +GGELF+RI G ++E +A + ++ V CH++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 250 VMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
V HRDLK EN L AP LK DFG S
Sbjct: 136 VCHRDLKLENTLL--DGSPAPRLKICDFGYS 164
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K ++ + Y + +LG G FG E+AT FA K + +
Sbjct: 45 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQ 100
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVG 240
+ HP ++ + A+ED + ++ E +GGELF+++ + +E +A + R +
Sbjct: 101 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 160
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+ H +H DLKPEN +F ++ LK IDFGL+ P + +V
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKV 209
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T FA K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T FA K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F FDK+ GYI +EL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 4/178 (2%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R + LQ + E + G+ LG+G F T L E AT +E+A K + KR +
Sbjct: 11 RPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI 70
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
M L HP +++ ++D ++ + G L I + G +
Sbjct: 71 IKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSF 129
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E T IV +E H G++HRDLKPEN L E+ ++ DFG + P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T FA K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 167 DLKPEN-LMIDQQ--GYIKVTDFGFA 189
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F FDK+ GYI +EL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R LG G FG L K T +A K + K+K+ + P +++
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-IQQAVNFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++V+E GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIKVADFGFA 189
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
+L+EE+IA KE F + D DN+G I+ EL ++ +G + ++E++ LM D+D +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 399 MDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
+++ EF+A M L E + AF FDK+G G I+ EL+ G L D +LE
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLE--DIIREVDQDNDGRIDYSEFVAMM 478
AF+ FDKD +G I+ EL T + GL ++ E D++ E+D D + +I++SEF+A+M
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
SL EEI L+E F+ D D GYI +L ++ +G + E+ L Q +++ G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 399 MDYGEFIAAMLHLNKIQRED-----HMYAAFSYFDKDGSGYITPDELQTACQ-----QFG 448
+D+ +F+ M + D + AF FD +G G I+ EL+ A + Q G
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D +E+IIR+VD + DGR+D+ EFV MM
Sbjct: 138 HRD--IEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 314 NLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373
N+N G + D V +G +++AE+ + L++ F+ DT+ G I+ EL++ ++
Sbjct: 71 NMNLGGHVDFDDF-VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 129
Query: 374 R-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+ +G + +I+ +++ D++ G +D+ EF+ M
Sbjct: 130 KLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G G FG L +K + + A K I + + H HP
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-----KIDENVKREIINHRSLRHP 74
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + +VME +GGELF+RI G ++E +A + ++ V CH++
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 250 VMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
V HRDLK EN L AP LK DFG S
Sbjct: 135 VCHRDLKLENTLL--DGSPAPRLKICDFGYS 163
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
K ++ + Y + +LG G FG E+AT FA K + +
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQ 206
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVG 240
+ HP ++ + A+ED + ++ E +GGELF+++ + +E +A + R +
Sbjct: 207 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 266
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+ H +H DLKPEN +F ++ LK IDFGL+ P + +V
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKV 315
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F +DK+ GYI DEL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F FDK+ GYI DEL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY E++ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEWLEFMK 158
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F FDK+ GYI +EL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 187 DLKPEN-LLIDQQ--GYIQVTDFGFA 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 92
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L E+ ++ DFG +
Sbjct: 153 DLKPENLLI---DEQGYIQVTDFGFA 175
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 159 DLKPEN-LLIDQQ--GYIQVTDFGFA 181
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LIIDQQ--GYIQVTDFGFA 188
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFGL+
Sbjct: 166 DLKPEN-LMIDQQ--GYIKVTDFGLA 188
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 187 DLKPEN-LLIDQQ--GYIQVTDFGFA 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ +GR LG+G+FG +L EK + A K + K ++ HL HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HHP 83
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ + D +++++E GEL+ + + + E++ A + + + CH
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 250 VMHRDLKPEN 259
V+HRD+KPEN
Sbjct: 144 VIHRDIKPEN 153
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
SL EEI L+E F+ D D GYI +L ++ +G + E+ L Q +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 399 MDYGEFIAAMLHLNKIQRED-----HMYAAFSYFDKDGSGYITPDELQTACQ-----QFG 448
+D+ +F+ M + D + AF FD +G G I+ EL+ A + Q G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 123
Query: 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D +E+IIR+VD + DGR+D+ EFV MM
Sbjct: 124 HRD--IEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 314 NLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373
N+N G + D V +G +++AE+ + L++ F+ DT+ G I+ EL++ ++
Sbjct: 57 NMNLGGHVDFDDF-VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 115
Query: 374 R-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+ +G + +I+ +++ D++ G +D+ EF+ M
Sbjct: 116 KLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 100
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G + E A IV E HSL +++R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 161 DLKPEN-LLIDQQ--GYIQVTDFGFA 183
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G + E A IV E HSL +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 187 DLKPEN-LLIDQQ--GYIQVTDFGFA 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
SL EEI L+E F+ D D GYI +L ++ +G + E+ L Q +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 399 MDYGEFIAAMLHLNKIQRED-----HMYAAFSYFDKDGSGYITPDELQTACQ-----QFG 448
+D+ +F+ M + D + AF FD +G G I+ EL+ A + Q G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG 123
Query: 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
D +E+IIR+VD + DGR+D+ EFV MM
Sbjct: 124 HRD--IEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 314 NLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373
N+N G + D V +G +++AE+ + L++ F+ DT+ G I+ EL++ ++
Sbjct: 57 NMNLGGHVDFDDF-VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 115
Query: 374 R-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+G + +I+ +++ D++ G +D+ EF+ M
Sbjct: 116 ALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + +G G FG L +K T++ A K I + H HP
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER-----GAAIDENVQREIINHRSLRHP 76
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + ++ME +GGEL++RI G ++E +A + ++ V CHS+
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 250 VMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
+ HRDLK EN L AP LK DFG S
Sbjct: 137 ICHRDLKLENTLL--DGSPAPRLKICDFGYS 165
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K + +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L K T +A K + K+K+ + + P +++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G + E A IV E HSL +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 159 DLKPEN-LLIDQQ--GYIQVTDFGFA 181
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME AGGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F DK+ GYI DEL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F FDK+ GYI DEL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY E + M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEXLEFMK 158
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 166 DLKPEN-LMIDQQ--GYIKVTDFGFA 188
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFGL+
Sbjct: 166 DLKPEN-LMIDQQ--GYIQVTDFGLA 188
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 55/215 (25%)
Query: 113 LQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX 172
Q GS+L L++ Y L +GQG +G + +E T+ A K + K K+
Sbjct: 16 FQGGSLL-----ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70
Query: 173 -XXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI----------- 220
+ HPN+ ++ YED + +VMELC GG L D++
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130
Query: 221 ---------------------------------IQRGHYTERKAADLTRIIVGVVEACHS 247
+QR E+ +++ R I + H+
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQR----EKLISNIMRQIFSALHYLHN 186
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
G+ HRD+KPENFLF + + +K +DFGLS F
Sbjct: 187 QGICHRDIKPENFLF-STNKSFEIKLVDFGLSKEF 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
+ L + LGQG FG FL V K T+ + +A K + K L
Sbjct: 30 FELLKVLGQGSFGKVFL-VRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD-- 86
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-DLTRIIVGVVEA 244
HP V+++ A++ ++++++ GG+LF R+ + +TE L + +G+ +
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL-DH 145
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HSLG+++RDLKPEN L EE +K DFGLS
Sbjct: 146 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS 177
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 123 TGNLKEMYSLGRK-LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
+G +++Y L LG+G C+ T +E+A K I K+
Sbjct: 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEM 63
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
++ GH NV++++ +E+ ++V E GG + I +R H+ E +A+ + + +
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
++ H+ G+ HRDLKPEN L + + +P+K DFGL
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G G FG L +K + + A K I + + H HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-----KIDENVKREIINHRSLRHP 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + +VME +GGELF+RI G ++E +A + ++ V CH++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 250 VMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
V HRDLK EN L AP LK FG S
Sbjct: 136 VCHRDLKLENTLL--DGSPAPRLKICAFGYS 164
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ + R LG G FG L + + +A K + K+++ M + HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMK-VLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+I++ G ++DA + ++M+ GGELF + + + A + +E HS
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+++RDLKPEN L + +K DFG + + P +T+ +
Sbjct: 127 IIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTYXL 163
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G G FG L +K + + A K I + + H HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-----KIDENVKREIINHRSLRHP 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + +VME +GGELF+RI G ++E +A + ++ V CH++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 250 VMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
V HRDLK EN L AP LK FG S
Sbjct: 136 VCHRDLKLENTLL--DGSPAPRLKICAFGYS 164
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 166 DLKPEN-LMIDQQ--GYIKVTDFGFA 188
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+ L + LGQG FG FL + + ++ +A K + K L +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--V 83
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HP ++++ A++ ++++++ GG+LF R+ + +TE + ++ H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
SLG+++RDLKPEN L EE +K DFGLS
Sbjct: 144 SLGIIYRDLKPENILL---DEEGHIKLTDFGLS 173
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+ L + LGQG FG FL + + ++ +A K + K L +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--V 84
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HP ++++ A++ ++++++ GG+LF R+ + +TE + ++ H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
SLG+++RDLKPEN L EE +K DFGLS
Sbjct: 145 SLGIIYRDLKPENILL---DEEGHIKLTDFGLS 174
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+ L + LGQG FG FL + + ++ +A K + K L +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--V 83
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HP ++++ A++ ++++++ GG+LF R+ + +TE + ++ H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
SLG+++RDLKPEN L EE +K DFGLS
Sbjct: 144 SLGIIYRDLKPENILL---DEEGHIKLTDFGLS 173
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 91
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 152 DLKPEN-LLIDQQ--GYIQVTDFGFA 174
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ +G G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIKVADFGFA 188
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 167 DLKPEN-LMIDQQ--GYIKVTDFGFA 189
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 167 DLKPEN-LMIDQQ--GYIKVTDFGFA 189
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LMIDQQ--GYIQVTDFGFA 188
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 110 SAGLQVGS--VLGRKTGNLKEMYSL-GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
S+G+ +G+ + + N Y L ++LG+G+F C+ K+T +E+A K + KR+
Sbjct: 8 SSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR- 66
Query: 167 XXXXXXXXXXXXXXXMHHLA------GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI 220
+H +A P VI + YE+ + +++E AGGE+F
Sbjct: 67 ------RGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC 120
Query: 221 IQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+ +E L + I+ V H ++H DLKP+N L + +K +DFG+
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180
Query: 279 S 279
S
Sbjct: 181 S 181
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G + E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIQVTDFGFA 188
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P +++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G + E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ ++ DFG +
Sbjct: 167 DLKPEN-LLIDQQ--GYIQVTDFGFA 189
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ LG G FG L T +A K + K+K+ + + P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GGE+F + + G + E A IV E HSL +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 167 DLKPEN-LMIDQQ--GYIKVTDFGFA 189
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L + +G G FG L +K + A K I + + H HP
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE-----KIDENVKREIINHRSLRHP 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + +VME +GGELF+RI G ++E +A + ++ V H++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 250 VMHRDLKPENFLFINQQEEAP-LKTIDFGLS 279
V HRDLK EN L AP LK DFG S
Sbjct: 136 VAHRDLKLENTLL--DGSPAPRLKIADFGYS 164
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ +G G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GG++F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIKVADFGFA 188
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
+ +G G FG L T +A K + K+K+ + + P +++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++D +++VME GG++F + + G ++E A IV E HSL +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLKPEN L I+QQ +K DFG +
Sbjct: 166 DLKPEN-LLIDQQ--GYIKVADFGFA 188
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 123 TGNLKEMYSLGRK-LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXX 181
+G +++Y L LG+G C+ T +E+A K I K+
Sbjct: 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEM 63
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
++ GH NV++++ +E+ ++V E GG + I +R H+ E +A+ + + +
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
++ H+ G+ HRDLKPEN L + + +P+K DF L
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDL 160
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L E Y + LG+G+FG CVE +++K + K + + + ++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNI 57
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEA 244
A H N++ + ++E + ++ E +G ++F+RI ER+ + ++
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
HS + H D++PEN ++ + + +K I+FG + +PG FR+
Sbjct: 118 LHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRL 162
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L EE+ + E F + D +N G++ ELK ++ +G L EI L+ D + M
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 400 DYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
Y +F M + K D + AF FD D +G I+ L+ ++ G L D +L
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 457 IIREVDQDNDGRIDYSEFVAMMQDS 481
+I E D D DG I+ +EF+A+ DS
Sbjct: 137 MIEEFDLDGDGEINENEFIAICTDS 161
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLXXXXXXXXXXXXX-XXMH 183
E + L + LG G +G FL + + T K +A K + K + +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H+ P ++ + A++ +H++++ GGELF + QR +TE + IV +E
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
H LG+++RD+K EN L + DFGLS F T R +
Sbjct: 174 HLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAY 218
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL---- 185
Y LG LG+G FGT F + + A K I + ++ + L
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 186 --AGHPNVIQIVGAYEDAVAVHVVME-LCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
GHP VI+++ +E +V+E +LFD I ++G E + +V +
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ CHS GV+HRD+K EN L ++ A K IDFG
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFG 185
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
+EI L + FK +D DNSG +++EE L + N + + ++ D D +G +D+
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 72
Query: 403 EFIAAMLHLN-KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDII 458
EFI + + K +E + AF +D D GYI+ EL + L DTQL+ I+
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 132
Query: 459 REV----DQDNDGRIDYSEFVAMMQDSGLGKKV 487
+ D+D DGRI + EF A++ + KK+
Sbjct: 133 DKTIINADKDGDGRISFEEFCAVVGGLDIHKKM 165
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
+EI L + FK +D DNSG +++EE L + N + + ++ D D +G +D+
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 73
Query: 403 EFIAAMLHLN-KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDII 458
EFI + + K +E + AF +D D GYI+ EL + L DTQL+ I+
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133
Query: 459 REV----DQDNDGRIDYSEFVAMMQDSGLGKKV 487
+ D+D DGRI + EF A++ + KK+
Sbjct: 134 DKTIINADKDGDGRISFEEFCAVVGGLDIHKKM 166
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ +EI L + FK +D DNSG +++EE L + N + + ++ D D +G +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEV 56
Query: 400 DYGEFIAAMLHLN-KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLE 455
D+ EFI + + K +E + AF +D D GYI+ EL + L DTQL+
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 456 DIIREV----DQDNDGRIDYSEFVAMM 478
I+ + D+D DGRI + EF A++
Sbjct: 117 QIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
+EI L + FK +D DNSG +++EE L + N + + ++ D D +G +D+
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 58
Query: 403 EFIAAMLHLN-KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDII 458
EFI + + K +E + AF +D D GYI+ EL + L DTQL+ I+
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 459 REV----DQDNDGRIDYSEFVAMM 478
+ D+D DGRI + EF A++
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 327 AVPPIGDRVIAESLSE--EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI 384
AV +++ A+ LS I GL F+ +D D S + +E ++GL ++G L +E
Sbjct: 16 AVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEA 75
Query: 385 DGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
+G+ + D + SGT+D EF+ A+ RE + AAF+ D+ G G +T D+L+
Sbjct: 76 EGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLR 132
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
F D+DGS + DE + + G LD + E + R+ D++ G +D EF+ ++
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALR 100
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLXXXXXXXXXXXXXXXMH 183
E + L R LG+G +G F V K T K FA K + K + +
Sbjct: 17 ECFELLRVLGKGGYGKVFQ-VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HP ++ ++ A++ +++++E +GGELF ++ + G + E A I +
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
H G+++RDLKPEN + +Q +K DFGL
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL 167
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLXXXXXXXXXXXXXXXMH 183
E + L R LG+G +G F V K T K FA K + K + +
Sbjct: 17 ECFELLRVLGKGGYGKVFQ-VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HP ++ ++ A++ +++++E +GGELF ++ + G + E A I +
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
H G+++RDLKPEN + +Q +K DFGL
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL 167
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ +I KE F MID + G+I E+L L +G N D ++G+M G +
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPI 56
Query: 400 DYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
++ F+ LN ED + AF+ FD++ SG+I D L+ G D ++++
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 457 IIREVDQDNDGRIDYSEFVAMMQ 479
+ RE D G +Y EF +++
Sbjct: 117 MYREAPIDKKGNFNYVEFTRILK 139
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
++ F D + SG+I + L++ L +G D E+D + + ID G +Y EF
Sbjct: 78 IRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRI 137
Query: 408 MLH 410
+ H
Sbjct: 138 LKH 140
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 76
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 137 KLENLML---DKDGHIKITDFGL 156
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 132 KLENLML---DKDGHIKITDFGL 151
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 132 KLENLML---DKDGHIKITDFGL 151
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 132 KLENLML---DKDGHIKITDFGL 151
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 132 KLENLML---DKDGHIKITDFGL 151
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 74
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 135 KLENLML---DKDGHIKITDFGL 154
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + + + HP + +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 132 KLENLML---DKDGHIKITDFGL 151
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
++E F++ D DN G +++EEL L+ +G N ++E++ + G ++ EF A
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKEFDLA 58
Query: 408 MLHL-------NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDII 458
++ M AF DK+G+G I EL+ G L +++E+++
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 459 REVDQDNDGRIDYSEFVAMM 478
+EV DG I+Y FV M+
Sbjct: 119 KEVSVSGDGAINYESFVDML 138
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE 455
D + F FDKD G ++ +EL +A + G + T E
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAE 42
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ A K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N L E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVLI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+ ++E F + D D +G I ++ELK + +G EI + D + +G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 400 DYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
++G+F+ ++ ++ + AF FD D +G I+ L+ ++ G L D +L++
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Query: 457 IIREVDQDNDGRIDYSEFVAMMQDSGL 483
I E D+D DG + EF+ + + + L
Sbjct: 145 XIDEADRDGDGEVSEQEFLRIXKKTSL 171
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
+E ++EEI + FK+ D D +G I+ + LK+ + +G NL D E+ + D D
Sbjct: 98 SEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGD 154
Query: 397 GTMDYGEFI 405
G + EF+
Sbjct: 155 GEVSEQEFL 163
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + +G LG+G F + T E A K I K+ + +H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK-IHCQLK 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACH 246
HP+++++ +ED+ V++V+E+C GE+ + R ++E +A I+ + H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S G++HRDL N L +K DFGL+
Sbjct: 130 SHGILHRDLTLSNLLLTRNMN---IKIADFGLA 159
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
+G+G FG L KA + +A K + K+ + + HP ++ +
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ A ++ V++ GGELF + + + E +A I + HSL +++RDL
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 165
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KPEN L +Q + DFGL
Sbjct: 166 KPENILLDSQGH---IVLTDFGL 185
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+++++ KE F++ D++ +G+IT E L+ L++ G + + + + D +G + +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 402 GEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDII 458
EF++ M + + ED + AF FD +G+GYI LQ A G L + + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 459 REVDQDNDGRIDYSEFVAMM 478
+ + G+I Y F+ M
Sbjct: 122 G-ITETEKGQIRYDNFINTM 140
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 99 SKKP-AHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFA 157
S KP AHV S+ ++ VL + Y GR LG+G F + + T++ FA
Sbjct: 14 SAKPSAHVDPKSAPLKEIPDVL--VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 158 CKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELF 217
K + K L +H +P+V+ G +ED V+VV+E+C L
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIA-IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 218 DRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ +R TE +A R + V+ H+ V+HRDLK N LF+N + +K DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFG 187
Query: 278 LS 279
L+
Sbjct: 188 LA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 99 SKKP-AHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFA 157
S KP AHV S+ ++ VL + Y GR LG+G F + + T++ FA
Sbjct: 14 SAKPSAHVDPKSAPLKEIPDVL--VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 158 CKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELF 217
K + K L +H +P+V+ G +ED V+VV+E+C L
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIA-IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 218 DRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ +R TE +A R + V+ H+ V+HRDLK N LF+N + +K DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFG 187
Query: 278 LS 279
L+
Sbjct: 188 LA 189
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 99 SKKP-AHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFA 157
S KP AHV S+ ++ VL + Y GR LG+G F + + T++ FA
Sbjct: 14 SAKPSAHVDPKSAPLKEIPDVL--VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 158 CKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELF 217
K + K L +H +P+V+ G +ED V+VV+E+C L
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIA-IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 218 DRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ +R TE +A R + V+ H+ V+HRDLK N LF+N + +K DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFG 187
Query: 278 LS 279
L+
Sbjct: 188 LA 189
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 175
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L EE+ + E F + D +N G++ ELK + +G L EI L+ D +
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 400 DYGEF-IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
Y +F I + K D + AF FD D +G I+ L+ ++ G L D +L
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 457 IIREVDQDNDGRIDYSEFVAMMQDS 481
I E D D DG I+ +EF+A+ DS
Sbjct: 137 XIEEFDLDGDGEINENEFIAICTDS 161
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 188
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 188
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 175
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 189
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 176
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 176
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 195
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 203
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMM 478
AFS +DKDG G IT EL T + GL+ T +L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 398 TMDYGEFIAAMLHLNK 413
T+D+ EF+ M + K
Sbjct: 62 TIDFPEFLTMMARIMK 77
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 188
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D DG ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 188
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 189
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 189
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 176
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y GR LG+G F + + T++ FA K + K L +H +P
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA-IHKSLDNP 86
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+V+ G +ED V+VV+E+C L + +R TE +A R + V+ H+
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRDLK N LF+N ++ +K DFGL+
Sbjct: 147 VIHRDLKLGN-LFLN--DDMDVKIGDFGLA 173
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 475 VAMM 478
V MM
Sbjct: 61 VQMM 64
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
EEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++Y
Sbjct: 1 EEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 57
Query: 402 GEFIAAM 408
EF+ M
Sbjct: 58 EEFVQMM 64
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 203
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
G++ L+ Y +G LG G FG+ + + + A K + K ++
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 180 XXMHHL----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADL 234
+ L +G VI+++ +E + +++E +LFD I +RG E A
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
++ V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 208
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 475 VAMM 478
V MM
Sbjct: 68 VQMM 71
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++
Sbjct: 7 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 64 YEEFVQMM 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 475 VAMM 478
V MM
Sbjct: 64 VQMM 67
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 60 YEEFVQMM 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 475 VAMM 478
V MM
Sbjct: 67 VQMM 70
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++
Sbjct: 6 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 63 YEEFVQMM 70
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVME-LCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E + +LFD I +RG E A ++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 160
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 475 VAMM 478
V MM
Sbjct: 64 VQMM 67
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 60 YEEFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 475 VAMM 478
V MM
Sbjct: 65 VQMM 68
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++
Sbjct: 4 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 61 YEEFVQMM 68
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 161
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 398 TMDYGEFIAAM 408
T+D+ EF+ M
Sbjct: 62 TIDFPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 62 GTIDFPEFLTMM 73
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 160
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 161
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E Y +K+G+G FG L +++ K I ++ +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN--MK 81
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRG-HYTERKAADLTRIIVGVVEAC 245
HPN++Q ++E+ ++++VM+ C GG+LF RI Q+G + E + D I ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H ++HRD+K +N ++ ++ DFG++
Sbjct: 142 HDRKILHRDIKSQNIFLT---KDGTVQLGDFGIA 172
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 90
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 147
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 148 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 188
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 97
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 154
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 155 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 195
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 161
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 91
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 148
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 149 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 189
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 91
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ Q T+ I+ ++ CHS
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 148
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 149 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 189
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 156
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 159
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 156
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T+ L+D+I EVD D +G ID+ EF+ MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAMLH-LNKIQREDHMYAAF 424
GT+D+ EF+ M + E+ + AF
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAF 89
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 183
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L+ Y +G LG G FG+ + + + A K + K ++ + L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 186 ----AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVG 240
+G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 241 VVEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
V CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGE---LKLIDFG 156
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
G+ K+ Y+ K+GQG GT + ++ AT +E A I + L M
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVM 71
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+PN++ + +Y + VVME AGG L D ++ E + A + R + +
Sbjct: 72 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E HS V+HRD+K +N L + +K DFG P
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
G+ K+ Y+ K+GQG GT + ++ AT +E A I + L M
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVM 71
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+PN++ + +Y + VVME AGG L D ++ E + A + R + +
Sbjct: 72 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E HS V+HRD+K +N L + +K DFG P
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
G+ K+ Y+ K+GQG GT + ++ AT +E A I + L M
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVM 71
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+PN++ + +Y + VVME AGG L D ++ E + A + R + +
Sbjct: 72 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E HS V+HRD+K +N L + +K DFG P
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + ++ K + K + +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGP 92
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + F ++ R T+ I+ ++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--RQTLTDYDIRFYMYEILKALDYCHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LS+ ++ LKE F MID D G+I +E+LK +G D E++ +++ + G +
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQL 65
Query: 400 DYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
++ F+ ++ ED + AFS FD+DG G+I D L+ + G
Sbjct: 66 NFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
L+ F M D D G+I + LK L+ +G N EI + + + N
Sbjct: 86 ALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLKN 134
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
G+ K+ Y+ K+GQG GT + ++ AT +E A I + L M
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVM 72
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+PN++ + +Y + VVME AGG L D ++ E + A + R + +
Sbjct: 73 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 130
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E HS V+HRD+K +N L + +K DFG P
Sbjct: 131 EFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 169
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKD +GYI+ EL+ G L D ++E +I+E D D DG+++Y EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 475 VAMM 478
V MM
Sbjct: 68 VKMM 71
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EEE LKE FK+ D D +GYI+ EL+ + +G L D E++ +++ D+D G ++
Sbjct: 7 AEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 401 YGEFIAAML 409
Y EF+ M+
Sbjct: 64 YEEFVKMMM 72
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEE++ L F+M D + GYI LEELK LQ G + + +I+ LM+ GD +N G +D
Sbjct: 3 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 59
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 60 YDEFLEFM 67
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYS 472
+ E+ + F FDK+ GYI +EL+ Q G + + +E+++++ D++NDGRIDY
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 473 EFVAMMQ 479
EF+ M+
Sbjct: 62 EFLEFMK 68
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 110 SAGLQVGSV-LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXX 168
S+G+ +G+ L ++ + +E+++ K+G+G FG F ++ TQK A K I L
Sbjct: 8 SSGVDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLEE 64
Query: 169 XXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTE 228
+ P V + G+Y + ++ME GG D +++ G E
Sbjct: 65 AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDE 123
Query: 229 RKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ A + R I+ ++ HS +HRD+K N L E +K DFG++
Sbjct: 124 TQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVA 171
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEE++ L F+M D + GYI LEELK LQ G + + +I+ LM+ GD +N G +D
Sbjct: 5 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 62 YDEFLEFM 69
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 413 KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRID 470
K + E+ + F FDK+ GYI +EL+ Q G + + +E+++++ D++NDGRID
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 471 YSEFVAMMQ 479
Y EF+ M+
Sbjct: 62 YDEFLEFMK 70
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKD +GYI+ EL+ G L D ++E +I+E D D DG+++Y EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 475 VAMM 478
V MM
Sbjct: 63 VKMM 66
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EEE LKE FK+ D D +GYI+ EL+ + +G L D E++ +++ D+D G ++
Sbjct: 2 AEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 58
Query: 401 YGEFIAAML 409
Y EF+ M+
Sbjct: 59 YEEFVKMMM 67
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G F F + T++ FA K I + L +H H +V+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGK-IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
G +ED V VV+ELC L + +R TE +A R IV + H V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K N LF+N+ E +K DFGL+
Sbjct: 148 KLGN-LFLNEDLE--VKIGDFGLA 168
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
S+ I + E+F +DT+++G ++ E+ L VG D I+ ++QA DI++ G
Sbjct: 32 SVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGN 89
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDII 458
+ Y EF+A I+ + AAF+ DKD GYI+ ++ + LD+ +++
Sbjct: 90 ITYTEFMAGCYRWKNIEST-FLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFF 148
Query: 459 REV 461
V
Sbjct: 149 LSV 151
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVA 476
F D + +G ++ E+ T G+ + I++ +D ++ G I Y+EF+A
Sbjct: 45 FYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFMA 97
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G F F + T++ FA K I + L +H H +V+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGK-IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
G +ED V VV+ELC L + +R TE +A R IV + H V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K N LF+N+ E +K DFGL+
Sbjct: 166 KLGN-LFLNEDLE--VKIGDFGLA 186
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G F F + T++ FA K I + L +H H +V+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGK-IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
G +ED V VV+ELC L + +R TE +A R IV + H V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K N LF+N+ E +K DFGL+
Sbjct: 168 KLGN-LFLNEDLE--VKIGDFGLA 188
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G F F + T++ FA K I + L +H H +V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGK-IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
G +ED V VV+ELC L + +R TE +A R IV + H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K N LF+N+ E +K DFGL+
Sbjct: 144 KLGN-LFLNEDLE--VKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G F F + T++ FA K I + L +H H +V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGK-IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
G +ED V VV+ELC L + +R TE +A R IV + H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K N LF+N+ E +K DFGL+
Sbjct: 144 KLGN-LFLNEDLE--VKIGDFGLA 164
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FD+DG+G I+ EL+ G L D +++++IRE D D DG I+Y EF
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
Query: 475 VAMM 478
V MM
Sbjct: 67 VRMM 70
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ E SEEE L E FK+ D D +G I+ EL+ + +G L D E+D +++ DID
Sbjct: 1 MKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 57
Query: 396 SGTMDYGEFIAAML 409
G ++Y EF+ M+
Sbjct: 58 DGHINYEEFVRMMV 71
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EEE++ L F+M D + GYI LEELK LQ G + + +I+ LM+ GD +N G +D
Sbjct: 13 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 70 YDEFLEFM 77
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVD 462
+ M +K + E+ + F FDK+ GYI +EL+ Q G + + +E+++++ D
Sbjct: 2 VRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61
Query: 463 QDNDGRIDYSEFVAMMQ 479
++NDGRIDY EF+ M+
Sbjct: 62 KNNDGRIDYDEFLEFMK 78
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G F F + T++ FA K I + L +H H +V+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGK-IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
G +ED V VV+ELC L + +R TE +A R IV + H V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K N LF+N+ E +K DFGL+
Sbjct: 142 KLGN-LFLNEDLE--VKIGDFGLA 162
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EEE++ L F+M D + GYI LEELK LQ G + + +I+ LM+ GD +N G +D
Sbjct: 8 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 65 YDEFLEFM 72
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 412 NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRI 469
+K + E+ + F FDK+ GYI +EL+ Q G + + +E+++++ D++NDGRI
Sbjct: 4 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 63
Query: 470 DYSEFVAMMQ 479
DY EF+ M+
Sbjct: 64 DYDEFLEFMK 73
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E+++ K+G+G FG F ++ TQK A K I L +
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQC 77
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P V + G+Y + ++ME GG D +++ G E + A + R I+ ++ H
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 136
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E +K DFG++
Sbjct: 137 SEKKIHRDIKAANVLL---SEHGEVKLADFGVA 166
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ + R +G+G FG + + T+K +A K + K+K M L HP
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HP 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + +++D + +V++L GG+L + Q H+ E +V ++ +
Sbjct: 76 FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR 135
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+KP+N L E + DF ++
Sbjct: 136 IIHRDMKPDNILL---DEHGHVHITDFNIA 162
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E+++ K+G+G FG F ++ TQK A K I L +
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQC 62
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P V + G+Y + ++ME GG D +++ G E + A + R I+ ++ H
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 121
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E +K DFG++
Sbjct: 122 SEKKIHRDIKAANVLL---SEHGEVKLADFGVA 151
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E+++ K+G+G FG F ++ TQK A K I L +
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQC 62
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P V + G+Y + ++ME GG D +++ G E + A + R I+ ++ H
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 121
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E +K DFG++
Sbjct: 122 SEKKIHRDIKAANVLL---SEHGEVKLADFGVA 151
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEE LKE F++ D D +G+I+ EL+ + +G L D E+D +++ D+D G ++
Sbjct: 2 SEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 58
Query: 401 YGEFIAAML 409
Y EF+ M+
Sbjct: 59 YEEFVKVMM 67
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKD +G+I+ EL+ G L D +++++IRE D D DG+I+Y EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 475 VAMM 478
V +M
Sbjct: 63 VKVM 66
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMM 478
AFS FDKDG G IT EL T + G + T +L+D+I EVD D +G ID+ EF+ +M
Sbjct: 15 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ L++E+I+ KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+D+ EF+ M
Sbjct: 61 GTIDFPEFLNLM 72
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 8/174 (4%)
Query: 105 VKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKR 164
+ R+S + L G+ +E + K+G+G G + EK T K+ A K + R
Sbjct: 22 MSRVSHEQFRAALQLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR 81
Query: 165 KLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG 224
K H H NV+ + +Y + VVME GG L D I+
Sbjct: 82 KQQRRELLFNEVVIMRDYH----HDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHT 136
Query: 225 HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
E + A + ++ + H+ GV+HRD+K ++ L + + +K DFG
Sbjct: 137 RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGF 187
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF DKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 475 VAMM 478
V MM
Sbjct: 88 VQMM 91
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID 394
++ ++ SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID
Sbjct: 21 LMKDTDSEEEI---REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 77
Query: 395 NSGTMDYGEFIAAM 408
G ++Y EF+ M
Sbjct: 78 GDGQVNYEEFVQMM 91
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ +L+ G L D +++++IRE D D DG+++Y +F
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 475 VAMM 478
V MM
Sbjct: 66 VQMM 69
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ +L+ + +G L D E+D +++ DID G ++
Sbjct: 5 SEEEI---REAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 401 YGEFIAAM 408
Y +F+ M
Sbjct: 62 YEDFVQMM 69
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
G+ K+ Y+ K+GQG GT + ++ AT +E A I + L M
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVM 72
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+PN++ + +Y + VVME AGG L D ++ E + A + R + +
Sbjct: 73 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 130
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
E HS V+HR++K +N L + +K DFG P
Sbjct: 131 EFLHSNQVIHRNIKSDNILL---GMDGSVKLTDFGFCAQITP 169
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
+ AF FD+DG G+IT DEL+ A G L +L+ +IRE D D DGR++Y EF M
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Query: 478 M 478
+
Sbjct: 68 L 68
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 346 AGLKEM---FKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
AGL+++ F+ D D G+IT++EL++ + +G L E+D +++ D+D G ++Y
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 403 EFIAAML 409
EF A ML
Sbjct: 63 EF-ARML 68
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEE++ L F+M D + GYI L+ELK LQ G + + +I+ LM+ GD +N G +D
Sbjct: 4 SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 61 YDEFLEFM 68
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYS 472
+ E+ + F FDK+ GYI DEL+ Q G + + +E+++++ D++NDGRIDY
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
Query: 473 EFVAMMQ 479
EF+ M+
Sbjct: 63 EFLEFMK 69
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G FG FL K T + FA K++ K + +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP + + ++ + VME GG+L I + +A I+ ++ HS
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
G+++RDLK +N L ++ +K DFG+
Sbjct: 138 KGIVYRDLKLDNILL---DKDGHIKIADFGM 165
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGL--DDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
AF FD+DG+G+I+ EL TA + G ++ +LE II+ +D D DG++D+ EFV ++
Sbjct: 41 AFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 43/69 (62%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ E+E+ ++E FK+ D D +G+I+ +EL ++ +G + E++ ++Q D+D G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 400 DYGEFIAAM 408
D+ EF+ +
Sbjct: 90 DFEEFVTLL 98
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G++ R T N E L LG+G FG L EKAT + +A K I K+++
Sbjct: 1 GAMDPRVTMNEFEYLKL---LGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAH 56
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ + HP + + +++ + VME GGELF + + ++E +A
Sbjct: 57 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 116
Query: 236 RIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
IV ++ HS V++RDLK EN + ++ +K DFGL
Sbjct: 117 AEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGL 157
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K I K+++ + + HP + +
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRD 254
+++ + VME GGELF + + ++E +A IV ++ HS V++RD
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 277
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
LK EN + ++ +K DFGL
Sbjct: 278 LKLENLML---DKDGHIKITDFGL 298
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 118 VLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXX 177
+ R T N E L LG+G FG L EKAT + +A K I K+++
Sbjct: 2 AMARVTMNEFEYLKL---LGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTL 57
Query: 178 XXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
+ + HP + + +++ + VME GGELF + + ++E +A
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 238 IVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
IV ++ HS V++RDLK EN + ++ +K DFGL
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGL 156
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K I K+++ + + HP + +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRD 254
+++ + VME GGELF + + ++E +A IV ++ HS V++RD
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
LK EN + ++ +K DFGL
Sbjct: 275 LKLENLML---DKDGHIKITDFGL 295
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K I K+++ + + HP + +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMK-ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRD 254
+++ + VME GGELF + + ++E +A IV ++ HS V++RD
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
LK EN + ++ +K DFGL
Sbjct: 135 LKLENLML---DKDGHIKITDFGL 155
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
E + L + LG+G FG FL K T + FA K++ K + +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP + + ++ + VME GG+L I + +A I+ ++ HS
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
G+++RDLK +N L ++ +K DFG+
Sbjct: 137 KGIVYRDLKLDNILL---DKDGHIKIADFGM 164
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + + K + K + +L G
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK------KKKIKREVKILENLRGGT 93
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I+++ +D V+ +V E + F ++ Q T+ ++ ++ CHS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMYELLKALDYCHS 150
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
G+MHRD+KP N + +QQ++ L+ ID+GL+ F+ P + V
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNV 191
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L G + YS LG G FG + V+K KE K I K K+
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG 74
Query: 179 XXXMH----HLAGHPNVIQIVGAYEDAVAVHVVMELCAGG-ELFDRIIQRGHYTERKAAD 233
+ H N+I+++ +E+ +VME G +LF I + E A+
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
+ R +V V ++HRD+K EN + E+ +K IDFG + + G F
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLF 186
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y L RKLG+G++ F + + K + K + +L G
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK------KKKIKREVKILENLRGGT 98
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I+++ +D V+ +V E + F ++ Q T+ ++ ++ CHS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMYELLKALDYCHS 155
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
G+MHRD+KP N + +QQ++ L+ ID+GL+ F+ P + V
Sbjct: 156 KGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNV 196
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 327 AVPPIGDRVIAES-LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEID 385
AV P GD + E+ S+ + L F+ +D + GY++ + LQ++GA ++ D
Sbjct: 9 AVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLS----RMDLQQIGALAVNPLGD 64
Query: 386 GLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED-----------------HMYAAFSYFD 428
++++ D S +D+ F+ + H ++ ED ++ AF +D
Sbjct: 65 RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYD 124
Query: 429 KDGSGYITPDE-LQTACQQFGLDDT--QLEDI----IREVDQDNDGRIDYSEFVAMMQDS 481
D G I+ E LQ G+ T QLE+I ++E D+D DG + + EF ++
Sbjct: 125 LDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184
Query: 482 GLGKKV 487
+ +K+
Sbjct: 185 DVEQKM 190
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
+ E Y K+G+G +G F C + T + A K + + M
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQ 58
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGEL--FDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++ ++ + +H+V E C L DR QRG E +T + V
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY-QRG-VPEHLVKSITWQTLQAVN 116
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
CH +HRD+KPEN L + +K DFG +
Sbjct: 117 FCHKHNCIHRDVKPENILITKH---SVIKLCDFGFA 149
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXX 179
GR ++ Y L +KLG+G +G + +++ T + A K I
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREI 59
Query: 180 XXMHHLAGHPNVIQIVGAYE-----DAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
+ L+GH N++ ++ D V ME + I++ H +
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH-----KQYV 114
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
++ V++ HS G++HRD+KP N L E +K DFGLS F
Sbjct: 115 VYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF 159
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
+ E Y + KLG G T +L + + A K+I L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
+ H N++ ++ E+ ++VME G L + I G + A + T I+ ++
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H + ++HRD+KP+N L + + LK DFG++
Sbjct: 128 HDMRIVHRDIKPQNILIDSNK---TLKIFDFGIA 158
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+G T + + Y + +G G G + ++ A K ++ R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
M + H N+I ++ + E+ V++VMEL ++IQ ER +
Sbjct: 74 LVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++VG+ + HS G++HRDLKP N + + +A LK +DFGL+
Sbjct: 131 LLYQMLVGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 3/150 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ R LG+G FG L K T +A K + K + + HP
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ Q+ ++ + VME GG+L I + + E +A I+ + H G
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+++RDLK +N L E K DFG+
Sbjct: 145 IIYRDLKLDNVLL---DHEGHCKLADFGMC 171
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
+ +L+EE+IA KE F + D DN+G I+ EL ++ +G + ++E++ LM D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 397 GTMDYGEFIAAM 408
+++ EF+A M
Sbjct: 61 HQIEFSEFLALM 72
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLE--DIIREVDQDNDGRIDYSEFVAMM 478
AF+ FDKD +G I+ EL T + GL ++ E D++ E+D D + +I++SEF+A+M
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMM 478
AAF FD DG G I+ EL T + G + T +L+ II EVD+D G ID+ EF+ MM
Sbjct: 13 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 400 DYGEFIAAMLHLNK 413
D+ EF+ M+ K
Sbjct: 63 DFEEFLVMMVRQMK 76
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+G T + + Y + +G G G + ++ A K ++ R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
M + H N+I ++ + E+ V++VMEL ++IQ ER +
Sbjct: 74 LVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++VG+ + HS G++HRDLKP N + + +A LK +DFGL+
Sbjct: 131 LLYQMLVGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+G T + + Y + +G G G + ++ A K ++ R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
M + H N+I ++ + E+ V++VMEL ++IQ ER +
Sbjct: 74 LVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++VG+ + HS G++HRDLKP N + + +A LK +DFGL+
Sbjct: 131 LLYQMLVGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMM 478
AAF FD DG G I+ EL T + G + T +L+ II EVD+D G ID+ EF+ MM
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNK 413
D+ EF+ M+ K
Sbjct: 74 DFEEFLVMMVRQMK 87
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG L K T++ +A K + K + + L P + Q+
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ ++ VME GG+L I Q G + E +A I + H G+++RDL
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K +N + E +K DFG+
Sbjct: 147 KLDNVML---DSEGHIKIADFGMC 167
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 10/158 (6%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXM 182
T +E++ + KLG+G +G+ + + K T + A K + +
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP------VESDLQEIIKEISI 77
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGV 241
P+V++ G+Y + +VME C G + D I R TE + A + + +
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+E H + +HRD+K N L E K DFG++
Sbjct: 138 LEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVA 172
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R LG+G FG F C KAT K +ACK + K++L + + ++
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVS 249
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLG 249
+ A+E + +VM + GG++ I + E +A T IV +E H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+++RDLKPEN L ++ ++ D GL++ + G T
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQT 344
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R LG+G FG F C KAT K +ACK + K++L + + ++
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVS 249
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLG 249
+ A+E + +VM + GG++ I + E +A T IV +E H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+++RDLKPEN L ++ ++ D GL++ + G T
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQT 344
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R LG+G FG F C KAT K +ACK + K++L + + ++
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVS 249
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLG 249
+ A+E + +VM + GG++ I + E +A T IV +E H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+++RDLKPEN L ++ ++ D GL++ + G T
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQT 344
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ LSEE+I KE F + D D G IT+EEL ++ + N + E+ ++ D D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+++ EF++ M
Sbjct: 61 GTIEFDEFLSLM 72
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AF FDKDG G IT +EL T + + T+ L+D+I EVD D +G I++ EF+++M
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ LSEE+I KE F + D D G IT+EEL ++ + N + E+ ++ D D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 397 GTMDYGEFIAAM 408
GT+++ EF++ M
Sbjct: 61 GTIEFDEFLSLM 72
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMM 478
AF FDKDG G IT +EL T + + T+ L+D+I EVD D +G I++ EF+++M
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R LG+G FG F C KAT K +ACK + K++L + + ++
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVS 249
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLG 249
+ A+E + +VM + GG++ I + E +A T IV +E H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+++RDLKPEN L ++ ++ D GL++ + G T
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQT 344
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD--DTQLEDIIREVDQDNDGRIDYS 472
+++ + AF FD DGSG I EL+ A + G + +++ +I E+D+D G ID+
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 473 EFVAMM 478
EF+ MM
Sbjct: 87 EFLTMM 92
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+ ++E F + DTD SG I +ELK ++ +G EI ++ D D SGT+
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 400 DYGEFIAAM 408
D+ EF+ M
Sbjct: 84 DFEEFLTMM 92
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT 442
D D SGT+D E AM L +++ + S DKDGSG I +E T
Sbjct: 40 DTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 90
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D ++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNK 413
D+ EF+ M+ K
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMM 478
AAF FD DG G I+ EL T + G + T +L+ II EVD+D G ID+ EF+ MM
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMM 82
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 340 LSEEEIAGLKEMFKMIDT-DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
LS ++ L+ F+ +T + SG ++ +++ L+ +G S I L+ D +G
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 399 MDYGEF--IAAML---HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT- 452
+D+ F I A +N Q + + AF +DK+G+GYI+ D ++ + LD+T
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAE--LDETL 124
Query: 453 ---QLEDIIREVDQDNDGRIDYSEFVAMM 478
L+ +I E+D D G +D+ EF+ +M
Sbjct: 125 SSEDLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 287 TFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIA 346
T ++ + L L Q+ + ++ Q L+ + G+ D + IG R + E ++ E++
Sbjct: 33 TDQIGIILEVLGIQQTKSTIRQ--LIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ 90
Query: 347 G-LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFI 405
L+E F++ D + +GYI+ + +++ L + L ++D ++ D D SGT+D+ EF+
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Query: 406 AAM 408
M
Sbjct: 151 GVM 153
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+G K+ E + L K+G G+FG+ F CV++ +A K +K+ L
Sbjct: 3 MGMKSRYTTEFHEL-EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALRE 60
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKAADL 234
L H +V++ A+ + + + E C GG L D I + ++ E + DL
Sbjct: 61 VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 120
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265
+ + HS+ ++H D+KP N +FI++
Sbjct: 121 LLQVGRGLRYIHSMSLVHMDIKPSN-IFISR 150
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG-- 187
+S+ R +G+G FG + C + T K +A K + K+++ + ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL----TRIIVGVVE 243
P ++ + A+ + +++L GG+L + Q G ++E AD+ II+G+ E
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAAEIILGL-E 306
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
H+ V++RDLKP N L E ++ D GL+ F
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG-- 187
+S+ R +G+G FG + C + T K +A K + K+++ + ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL----TRIIVGVVE 243
P ++ + A+ + +++L GG+L + Q G ++E AD+ II+G+ E
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAAEIILGL-E 305
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
H+ V++RDLKP N L E ++ D GL+ F
Sbjct: 306 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 341
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXX 175
G++ R T E+ K+G G+FG+ F CV++ +A K +K+ L
Sbjct: 1 GAMKSRYTTEFHEL----EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNA 55
Query: 176 XXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKA 231
L H +V++ A+ + + + E C GG L D I + ++ E +
Sbjct: 56 LREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265
DL + + HS+ ++H D+KP N +FI++
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSN-IFISR 148
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXX 180
R+ + E++ + +LG G FG + KA KE + AK
Sbjct: 12 RRDLDPNEVWEIVGELGDGAFGKVY----KAKNKETGALAAAKVIETKSEEELEDYIVEI 67
Query: 181 XMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI---IQRGHYTERKAADLTRI 237
+ HP +++++GAY + +++E C GG + D I + RG TE + + R
Sbjct: 68 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQ 125
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ + HS ++HRDLK N L E ++ DFG+S
Sbjct: 126 MLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVS 164
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
K + R LG+G FG C +AT K +ACK + K+++ + +
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN 242
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEA 244
V+ + AYE A+ +V+ L GG+L I G + E +A I +E
Sbjct: 243 SR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
H +++RDLKPEN L + ++ D GL++ G T +
Sbjct: 302 LHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIK 343
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 182 MHHLAGHPNVIQIVGAYED--AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ +L G PN+++++ D + ++ E + + Y D+ I
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF------KVLYPTLTDYDIRYYIY 133
Query: 240 GVVEA---CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+++A CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 185
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 360 SGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI 414
SG++++EE KK + N + + + D + GT+D+ EFI A+ ++
Sbjct: 40 SGHLSMEEFKK----IYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRG 95
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQF--------------GLDDTQLEDIIRE 460
+ E + AFS +D DG+GYI+ E+ Q + + E I R+
Sbjct: 96 KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQ 155
Query: 461 VDQDNDGRIDYSEFV 475
+D + DG++ EF+
Sbjct: 156 MDTNRDGKLSLEEFI 170
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXX 180
R+ + E++ + +LG G FG + KA KE + AK
Sbjct: 4 RRDLDPNEVWEIVGELGDGAFGKVY----KAKNKETGALAAAKVIETKSEEELEDYIVEI 59
Query: 181 XMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI---IQRGHYTERKAADLTRI 237
+ HP +++++GAY + +++E C GG + D I + RG TE + + R
Sbjct: 60 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQ 117
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ + HS ++HRDLK N L E ++ DFG+S
Sbjct: 118 MLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVS 156
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 185
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
+G VI+++ +E + +++E +LFD I +RG E A ++ V
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 245 CHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
CH+ GV+HRD+K EN L +N+ E LK IDFG
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFG 203
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 205
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 182 MHHLAGHPNVIQIVGAYED--AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ +L G PN+++++ D + ++ E + + Y D+ I
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF------KVLYPTLTDYDIRYYIY 132
Query: 240 GVVEA---CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+++A CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+G T + + Y + +G G G + ++ A K ++ R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
M + H N+I ++ + E+ V++VMEL ++IQ ER +
Sbjct: 74 LVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++ G+ + HS G++HRDLKP N + + +A LK +DFGL+
Sbjct: 131 LLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG-- 187
+S+ R +G+G FG + C + T K +A K + K+++ + ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL----TRIIVGVVE 243
P ++ + A+ + +++L GG+L + Q G ++E AD+ II+G+ E
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAAEIILGL-E 306
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
H+ V++RDLKP N L E ++ D GL+ F
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG-- 187
+S+ R +G+G FG + C + T K +A K + K+++ + ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL----TRIIVGVVE 243
P ++ + A+ + +++L GG+L + Q G ++E AD+ II+G+ E
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAAEIILGL-E 306
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
H+ V++RDLKP N L E ++ D GL+ F
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 399 MDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
M++G+F+ M +++ ++ + AF FD D +G I+ L+ ++ G L D +L+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 456 DIIREVDQDNDGRIDYSEFVAMMQDSGL 483
++I E D+D DG + EF+ +M+ + L
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMKKTSL 88
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++E ++EEI + FK+ D D +G I+ + LK+ + +G NL D E+ ++ D D
Sbjct: 14 MSEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 70
Query: 396 SGTMDYGEFIAAM 408
G + EF+ M
Sbjct: 71 DGEVSEQEFLRIM 83
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E+++ ++G+G FG F ++ TQ+ A K I L +
Sbjct: 22 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII---DLEEAEDEIEDIQQEITVLSQC 78
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
V + G+Y + ++ME GG D +++ G + E + A + + I+ ++ H
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLH 137
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E+ +K DFG++
Sbjct: 138 SEKKIHRDIKAANVLL---SEQGDVKLADFGVA 167
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 182 MHHLAGHPNVIQIVGAYED--AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+ +L G PN+++++ D + ++ E + +++ Y D+ I
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVL----YPTLTDYDIRYYIY 134
Query: 240 GVVEA---CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+++A CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 135 ELLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 186
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ ++ CHS G+MHRD+KP N + E L+ ID+GL+ F+ PG + V
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMM 478
AAF FD DG G I+ L T + G + T +L+ II EVD+D G ID+ EF+ MM
Sbjct: 24 AAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ + L ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNK 413
D+ EF+ M+ K
Sbjct: 74 DFEEFLVMMVRQMK 87
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
K + R LG+G FG C +AT K +ACK + K+++ + +
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN 242
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEA 244
V+ + AYE A+ +V+ L GG+L I G + E +A I +E
Sbjct: 243 SR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
H +++RDLKPEN L + ++ D GL++ G T +
Sbjct: 302 LHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIK 343
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 17/265 (6%)
Query: 117 SVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXX 176
SV + + Y KLG+G +G + ++ T + A K I R
Sbjct: 23 SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI--RLEHEEEGVPGTA 80
Query: 177 XXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
+ H N+I++ +H++ E A +L + + + R
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLY 139
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLF-INQQEEAP-LKTIDFGLSMFFRPGLTFRVWLRL 294
++ V CHS +HRDLKP+N L ++ E P LK DFGL+ F G+ R +
Sbjct: 140 QLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHE 197
Query: 295 HFLFFQKQRQSVLQTRLVR---NLNEPGSLWPDKVAVPPI--GDRVIAESLSEEEIAGLK 349
+ + + +L +R ++ +W + + P+ GD I + E+ GL
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257
Query: 350 EMFKMIDTDNSGYITLEELKKGLQR 374
+ DT G L + K+ +
Sbjct: 258 D-----DTTWPGVTALPDWKQSFPK 277
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACK-SIAKRKLXXXXXXXXXXXXXXXMHHLAGH 188
Y LGRK+G G FG +L A+ +E A K K K M G
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTK---HPQLHIESKFYKMMQGGVGI 67
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P+ I+ GA D + VMEL +LF+ ++ ++ + L ++ +E H
Sbjct: 68 PS-IKWCGAEGDYNVM--VMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 122
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
S +HRD+KP+NFL ++ + IDFGL+ +R T
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E+++ ++G+G FG + ++ T++ A K I L +
Sbjct: 18 EELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKII---DLEEAEDEIEDIQQEITVLSQC 74
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P + + G+Y + + ++ME GG D +++ G E A + R I+ ++ H
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLH 133
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E+ +K DFG++
Sbjct: 134 SERKIHRDIKAANVLL---SEQGDVKLADFGVA 163
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + +A LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 423 AFSYFDKDGSGYITPDELQTACQ-----QFGLDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
AF FD +G G I+ EL+ A + Q G D +E+IIR+VD + DGR+D+ EFV M
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRD--IEEIIRDVDLNGDGRVDFEEFVRM 69
Query: 478 M 478
M
Sbjct: 70 M 70
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L++ F+ DT+ G I+ EL++ +++ +G + +I+ +++ D++ G +D+ EF+
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 68
Query: 407 AM 408
M
Sbjct: 69 MM 70
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACK-SIAKRKLXXXXXXXXXXXXXXXMHHLAGH 188
Y LGRK+G G FG +L + A +E A K K K M G
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGI 67
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P I+ GA D + VMEL +LF+ ++ ++ + L ++ +E H
Sbjct: 68 P-TIRWCGAEGDYNVM--VMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 122
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
S +HRD+KP+NFL ++ + IDFGL+ +R T
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 48.5 bits (114), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
E L E E LKE F+++D + G I ++ L+ L+ +G L + EI+ ++ D D SG
Sbjct: 2 EDLDERE---LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSG 58
Query: 398 TMDYGEFIAAML 409
T+DY EF M+
Sbjct: 59 TVDYEEFKCLMM 70
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E + AF DK+ G I D L+ + G L + ++E++I E D D G +DY EF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 475 VAMMQDS 481
+M S
Sbjct: 66 KCLMMSS 72
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACK-SIAKRKLXXXXXXXXXXXXXXXMHHLAGH 188
Y LGRK+G G FG +L + A +E A K K K M G
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGI 65
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P I+ GA D + VMEL +LF+ ++ ++ + L ++ +E H
Sbjct: 66 P-TIRWCGAEGDYNVM--VMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 120
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
S +HRD+KP+NFL ++ + IDFGL+ +R T
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 161
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G G+FG+ F CV++ +A K +K+ L L H +V++
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGV 250
A+ + + + E C GG L D I + ++ E + DL + + HS+ +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 251 MHRDLKPENFLFINQ 265
+H D+KP N +FI++
Sbjct: 133 VHMDIKPSN-IFISR 146
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N ++ + + +LG G FG + KA KE + + AK +
Sbjct: 34 NPEDFWEIIGELGDGAFGKVY----KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVE 243
HPN+++++ A+ + +++E CAGG + +++ TE + + + + +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H ++HRDLK N LF + +K DFG+S
Sbjct: 150 YLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS 182
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G G+FG+ F CV++ +A K +K+ L L H +V++
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGV 250
A+ + + + E C GG L D I + ++ E + DL + + HS+ +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 251 MHRDLKPENFLFINQ 265
+H D+KP N +FI++
Sbjct: 135 VHMDIKPSN-IFISR 148
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N ++ + + +LG G FG + KA KE + + AK +
Sbjct: 34 NPEDFWEIIGELGDGAFGKVY----KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVE 243
HPN+++++ A+ + +++E CAGG + +++ TE + + + + +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H ++HRDLK N LF + +K DFG+S
Sbjct: 150 YLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
N ++ + + +LG G FG + KA KE + + AK +
Sbjct: 34 NPEDFWEIIGELGDGAFGKVY----KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVE 243
HPN+++++ A+ + +++E CAGG + +++ TE + + + + +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H ++HRDLK N LF + +K DFG+S
Sbjct: 150 YLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVS 182
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 346 AGLKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
A +KE+F+++D D SG+I EELK KG G +L D+E L+ AGD D+ G +
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 403 EF 404
EF
Sbjct: 101 EF 102
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 395 NSGTMDYGEFIAAMLHLN--KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---- 448
+ GT DY F HL K + + + F DKD SG+I +EL+ + F
Sbjct: 20 DPGTFDYKRF----FHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75
Query: 449 -LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
L+DT+ + ++ D D+DG+I EF M+
Sbjct: 76 DLNDTETKALLAAGDSDHDGKIGADEFAKMV 106
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 21/158 (13%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G FG F K +A K I +L HP +++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 196 GAY------------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
A+ V +++ M+LC L D + R ER+ + I + + E
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 244 AC---HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
A HS G+MHRDLKP N F + +K DFGL
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGL 164
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVI-QI 194
LG+G FG L K T + +A K I K+ + + L G P + Q+
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVK-ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
++ ++ VME GG+L I Q G + E A I + S G+++RD
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 255 LKPENFLFINQQEEAPLKTIDFGLS 279
LK +N + E +K DFG+
Sbjct: 147 LKLDNVML---DSEGHIKIADFGMC 168
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACH 246
+ Q+ A++D +++VME GG+L + + G ER A++ R IV +++ H
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVH 179
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
LG +HRD+KP+N L ++ DFG + R T R
Sbjct: 180 RLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVR 219
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ L R +G+G + L K T + +A K + K + + HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + ++ + V+E GG+L + ++ E A + I + H G
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF-FRPGLT 287
+++RDLK +N L E +K D+G+ RPG T
Sbjct: 142 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDT 177
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ L R +G+G + L K T + +A K + K + + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + ++ + V+E GG+L + ++ E A + I + H G
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF-FRPGLT 287
+++RDLK +N L E +K D+G+ RPG T
Sbjct: 127 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDT 162
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ L R +G+G + L K T + +A K + K + + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + ++ + V+E GG+L + ++ E A + I + H G
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF-FRPGLT 287
+++RDLK +N L E +K D+G+ RPG T
Sbjct: 131 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDT 166
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 413 KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRID 470
K + E+ + F FDK+ G+I +EL + G + + +ED++++ D++NDGRID
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 64
Query: 471 YSEFVAMMQ 479
+ EF+ MM+
Sbjct: 65 FDEFLKMME 73
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ SEEE+A F++ D + G+I +EEL + L+ G ++++ +I+ LM+ D +N
Sbjct: 4 AKGKSEEELANC---FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 60
Query: 397 GTMDYGEFIAAM 408
G +D+ EF+ M
Sbjct: 61 GRIDFDEFLKMM 72
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ + +K+G+GQF + A K + L + L HP
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHP 92
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRII-----QRGHYTERKAADLTRIIVGVVEA 244
NVI+ ++ + +++V+EL G+L R+I Q+ ER + +E
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
HS VMHRD+KP N +FI +K D GL FF
Sbjct: 152 MHSRRVMHRDIKPAN-VFITAT--GVVKLGDLGLGRFF 186
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G L EK + ++ A K + RK H NV+++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF----NVVEM 107
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + V+ME GG L D I+ + E + A + ++ + H+ GV+HRD
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + +K DFG
Sbjct: 167 IKSDSILLTL---DGRVKLSDFGF 187
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVI-QI 194
LG+G FG L K T + +A K I K+ + + L G P + Q+
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVK-ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
++ ++ VME GG+L I Q G + E A I + S G+++RD
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
LK +N + E +K DFG+
Sbjct: 468 LKLDNVML---DSEGHIKIADFGM 488
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K DTD SG I EL + G +L + + +++ D SG MD+ F
Sbjct: 87 IKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYS-DESGNMDFDNF 145
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I+ ++ L D M+ AF DKDG+G I
Sbjct: 146 ISCLVRL------DAMFRAFKSLDKDGTGQI 170
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDI-IREVDQDN 465
++ Q F +D+D SG I +EL+ A + L D Q DI IR+ D+
Sbjct: 66 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGYRLSD-QFHDILIRKFDRQG 118
Query: 466 DGRIDYSEFV 475
G+I + +F+
Sbjct: 119 RGQIAFDDFI 128
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 128 IQGCIVLQRLT------DIFRRYDTDQDGWI 152
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ ELQ A + + II D++N +++SE
Sbjct: 3 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 62
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 63 FTGVWKYITDWQNVFR 78
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI--AKRKLXXXXXXXXXXXXXXXMHHLAGHP---- 189
LGQG FG + +A K I + KL + + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 190 --NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER-KAADLTRIIVGVVEACH 246
N ++ + A + + + ME C G L+D I +R + L R I+ + H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S G++HRDLKP N +FI+ E +K DFGL+
Sbjct: 134 SQGIIHRDLKPMN-IFID--ESRNVKIGDFGLA 163
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQD 464
++ Q F +D+D SG I +EL+ A FG L D + +IR+ D+
Sbjct: 88 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 465 NDGRIDYSEFV 475
G+I + +F+
Sbjct: 142 GRGQIAFDDFI 152
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 152 IQGCIVLQRLT------DIFRRYDTDQDGWI 176
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ +ELQ A + + II D++N +++SE
Sbjct: 25 QSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 84
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 85 FTGVWKYITDWQNVFR 100
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA 173
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQD 464
++ Q F +D+D SG I +EL+ A FG L D + +IR+ D+
Sbjct: 69 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 122
Query: 465 NDGRIDYSEFV 475
G+I + +F+
Sbjct: 123 GRGQIAFDDFI 133
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 133 IQGCIVLQRLT------DIFRRYDTDQDGWI 157
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ ELQ A + + II D++N +++SE
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 65
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 66 FTGVWKYITDWQNVFR 81
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLX 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA 173
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ L R +G+G + L K T + +A + + K + + HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + ++ + V+E GG+L + ++ E A + I + H G
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF-FRPGLT 287
+++RDLK +N L E +K D+G+ RPG T
Sbjct: 174 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDT 209
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI-IREVDQ 463
++ Q F +D+D SG I +EL+ A FG L D Q DI IR+ D+
Sbjct: 66 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSD-QFHDILIRKFDR 118
Query: 464 DNDGRIDYSEFV 475
G+I + +F+
Sbjct: 119 QGRGQIAFDDFI 130
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 130 IQGCIVLQRLT------DIFRRYDTDQDGWI 154
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ ELQ A + + II D++N +++SE
Sbjct: 3 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 62
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 63 FTGVWKYITDWQNVFR 78
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLX 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA 173
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD---RIIQRGHYT-----ERKAADLTRIIV 239
HPN++ ++ + +VM+L +GG + D I+ +G + E A + R ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+E H G +HRD+K N L E+ ++ DFG+S F G
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATG 174
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI-IREVDQ 463
++ Q F +D+D SG I +EL+ A FG L D Q DI IR+ D+
Sbjct: 87 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSD-QFHDILIRKFDR 139
Query: 464 DNDGRIDYSEFV 475
G+I + +F+
Sbjct: 140 QGRGQIAFDDFI 151
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 151 IQGCIVLQRLT------DIFRRYDTDQDGWI 175
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ ELQ A + + II D++N +++SE
Sbjct: 24 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 83
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 84 FTGVWKYITDWQNVFR 99
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFV 475
+ + AF FD D SG IT +L+ ++ G L + +L+++I E D+++D ID EF+
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFI 68
Query: 476 AMMQDSGL 483
+M+ + L
Sbjct: 69 RIMKKTSL 76
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 352 FKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
F++ D DNSG IT+++L++ + +G NL + E+ ++ D ++ +D EFI M
Sbjct: 15 FRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 71
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLX 130
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 131 GI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA 166
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI-IREVDQ 463
++ Q F +D+D SG I +EL+ A FG L D Q DI IR+ D+
Sbjct: 65 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSD-QFHDILIRKFDR 117
Query: 464 DNDGRIDYSEFV 475
G+I + +F+
Sbjct: 118 QGRGQIAFDDFI 129
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 129 IQGCIVLQRLT------DIFRRYDTDQDGWI 153
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ ELQ A + + II D++N +++SE
Sbjct: 2 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 61
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 62 FTGVWKYITDWQNVFR 77
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL---- 185
+ LGRK+G G FG +L T +E A K L ++ +
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKIYRILQGG 62
Query: 186 AGHPNV--IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII----- 238
G PNV + G Y +VM+L G L D ++ RK + T ++
Sbjct: 63 TGIPNVRWFGVEGDYN-----VLVMDLL-GPSLEDLF----NFCSRKLSLKTVLMLADQM 112
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+ VE HS +HRD+KP+NFL + + IDFGL+ +R
Sbjct: 113 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 360 SGYITLEELKKGLQRVGANL-MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED 418
SG TL E K L G N + ID + D + G +D+ EFIAA+ + + + E
Sbjct: 34 SGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQ 93
Query: 419 HMYAAFSYFDKDGSGYITPDEL-------QTACQQFGLDDTQLEDII-REVDQDNDGRID 470
+ F +D DG+G I +EL Q Q L + +++ ++D +NDG +
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
Query: 471 YSEFV-AMMQDSGLGKKVFK 489
EF+ M +D L + V+K
Sbjct: 154 LEEFINGMAKDQDLLEIVYK 173
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD---RIIQRGHYT-----ERKAADLTRIIV 239
HPN++ ++ + +VM+L +GG + D I+ +G + E A + R ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+E H G +HRD+K N L E+ ++ DFG+S F G
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATG 169
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+ + L + Y +G G +G+ ++K + ++ A K ++ R
Sbjct: 33 VNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRE 91
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR---GHYTERKAADLT 235
+ H+ H NVI ++ + A ++ + +Q+ ++E K L
Sbjct: 92 LLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ ++ HS GV+HRDLKP N L +N E+ LK +DFGL+
Sbjct: 151 YQMLKGLKYIHSAGVVHRDLKPGN-LAVN--EDCELKILDFGLA 191
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 138
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 139 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 136
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 137 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 172
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 138
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 139 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 174
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG-- 187
Y+L ++G+G +G L + +A K ++K+KL G
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 188 --------------------HPNVIQIVGAYEDAVAVHVVM--ELCAGGELFDRIIQRGH 225
HPNV+++V +D H+ M EL G + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLKP 133
Query: 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+E +A + ++ +E H ++HRD+KP N L E+ +K DFG+S F+
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEFK 188
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 131
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 132 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 167
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 175
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 176 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 211
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 175
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 176 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 211
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 131
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 132 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 167
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G + +++ K A K + RK H NV+++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH----ENVVEM 86
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 146 IKSDSILLTH---DGRVKLSDFGF 166
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF--IAAM 408
+FK +D + G ++ EE+K + + + + +A DID +G +D EF AA
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 409 LHLNKIQRED-HMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG 467
+ + E + + D DG G +T +E+ T ++FG + ++ D I + D + DG
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYE--KVVDQIMKADANGDG 122
Query: 468 RIDYSEFVAM 477
I EF+A
Sbjct: 123 YITLEEFLAF 132
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID 394
V + LS+E++ GLK ++K++D D G +T EE+ ++ G + +D +M+A D +
Sbjct: 65 VKEQDLSDEKV-GLKILYKLMDADGDGKLTKEEVTTFFKKFG---YEKVVDQIMKA-DAN 119
Query: 395 NSGTMDYGEFIA 406
G + EF+A
Sbjct: 120 GDGYITLEEFLA 131
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 130
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 131 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 166
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G + +++ K A K + RK H NV+++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH----ENVVEM 93
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 153 IKSDSILLTH---DGRVKLSDFGF 173
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G + +++ K A K + RK H NV+++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH----ENVVEM 91
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 151 IKSDSILLTH---DGRVKLSDFGF 171
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+ EE KE F++ D DN +T EEL ++ +GAN +I +++ D DNSG
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 400 DYGEFIAAMLH 410
D F+ ML
Sbjct: 68 DQETFLTIMLE 78
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMMQD 480
AF FDKD +T +EL T + G + T+ + +I+++ D+DN G+ D F+ +M +
Sbjct: 19 AFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLE 78
Query: 481 SG 482
G
Sbjct: 79 YG 80
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G + +++ K A K + RK H NV+++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH----ENVVEM 136
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 196 IKSDSILLTH---DGRVKLSDFGF 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
+ + L + Y +G G +G+ ++K + ++ A K ++ R
Sbjct: 15 VNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR---GHYTERKAADLT 235
+ H+ H NVI ++ + A ++ + +Q+ ++E K L
Sbjct: 74 LLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ ++ HS GV+HRDLKP N L +N E+ LK +DFGL+
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGN-LAVN--EDCELKILDFGLA 173
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 142
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 143 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 178
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G + +++ K A K + RK H NV+++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH----ENVVEM 82
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 142 IKSDSILLTH---DGRVKLSDFGF 162
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 131
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 132 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 167
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 138
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 139 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 174
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G G + +++ K A K + RK H NV+++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 213
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 273 IKSDSILLTH---DGRVKLSDFGF 293
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L +++I +KE F MID D G+++ E++K +++G D E+ +++ G +
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 67
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYIT----PDELQTACQQFGLDDTQL 454
++ F++ L+ E+ + AF+ FD+ + + D L+ F D+ ++
Sbjct: 68 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 127
Query: 455 EDIIREVDQDNDGRIDYSEFVAMMQDSG 482
+E + G+ DY +F AM++ SG
Sbjct: 128 --TFKEAPVEG-GKFDYVKFTAMIKGSG 152
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++IQ ER + L +++
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 139
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 140 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 175
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDEL 440
+E+ ++ D D +GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 441 QTACQQFG 448
+ G
Sbjct: 61 RHVMTNLG 68
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+L+D+I EVD D +G ID+ EF+ MM
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMM 27
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376
R + ++ SEEEI +E F++ D D +GYI+ EL+ + +G
Sbjct: 29 RKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R +G G +G+ + +++ A K ++ R + HL H NVI
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLK-HENVIG 91
Query: 194 IVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
++ + ED V++V L G + I++ ++ L ++ ++ HS
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HRDLKP N + E++ L+ +DFGL+
Sbjct: 150 AGIIHRDLKPSN---VAVNEDSELRILDFGLA 178
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L +++I +KE F MID D G+++ E++K +++G D E+ +++ G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 56
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSG-----YITPDELQTACQQFGLDDTQ 453
++ F++ L+ E+ + AF+ FD+ + YI D L+ F D+ +
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIK-DLLENMGDNFNKDEMR 115
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSG 482
+ +E + G+ DY +F AM++ SG
Sbjct: 116 M--TFKEAPVEG-GKFDYVKFTAMIKGSG 141
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y +GR++G+G FG F ++ A K +R + G P
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIP 68
Query: 190 NVIQIVGAYEDAVAVHVVMEL-CAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHS 247
NV Y +H V+ + G L D + G ++ + A + ++ V++ H
Sbjct: 69 NVY-----YFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 123
Query: 248 LGVMHRDLKPENFLF--INQQEEAPLKTIDFGLSMFFRPGLT 287
+++RD+KP+NFL N + + +DFG+ F+R +T
Sbjct: 124 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 165
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + + D G + L +++ G+ CHS V+H
Sbjct: 71 LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 129
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKPEN L IN E +K DFGL+ F G+ R +
Sbjct: 130 RDLKPEN-LLINT--EGAIKLADFGLARAF--GVPVRTY 163
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y +GR++G+G FG F ++ A K +R + G P
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIP 69
Query: 190 NVIQIVGAYEDAVAVHVVMEL-CAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHS 247
NV Y +H V+ + G L D + G ++ + A + ++ V++ H
Sbjct: 70 NVY-----YFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 124
Query: 248 LGVMHRDLKPENFLF--INQQEEAPLKTIDFGLSMFFRPGLT 287
+++RD+KP+NFL N + + +DFG+ F+R +T
Sbjct: 125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + + D G + L +++ G+ CHS V+H
Sbjct: 69 LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 127
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKPEN L IN E +K DFGL+ F G+ R +
Sbjct: 128 RDLKPEN-LLINT--EGAIKLADFGLARAF--GVPVRTY 161
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC---HSLGVMHRDLKPE 258
V +++ M+LC L D + +R +R+ I + + EA HS G+MHRDLKP
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPS 193
Query: 259 NFLFINQQEEAPLKTIDFGL 278
N F +K DFGL
Sbjct: 194 NIFFTMDDV---VKVGDFGL 210
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 11/151 (7%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNV 191
LG ++G+G FG F +A A KS + L + HPN+
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKS-CRETLPPDLKAKFLQEARILKQY--SHPNI 174
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII---VGVVEACHSL 248
++++G +++VMEL GG+ + G + L +++ +E S
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E+ LK DFG+S
Sbjct: 233 CCIHRDLAARNCLVT---EKNVLKISDFGMS 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 4/162 (2%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
++++S R++G G FG + + + A K ++ + L
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HPN IQ G Y +VME C G + + E + A +T + + H
Sbjct: 113 -HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
S ++HRD+K N L E +K DFG + P F
Sbjct: 172 SHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLA 172
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 68 LRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQ 124
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 168
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ + GA + V++ MEL GG L I Q G E +A + +E H+
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 183
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++H D+K +N L + A L DFG ++ +P
Sbjct: 184 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQP 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 4/162 (2%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
++++S R++G G FG + + + A K ++ + L
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HPN IQ G Y +VME C G + + E + A +T + + H
Sbjct: 74 -HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
S ++HRD+K N L E +K DFG + P F
Sbjct: 133 SHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF 171
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 11/151 (7%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNV 191
LG ++G+G FG F +A A KS R+ + + HPN+
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNI 174
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII---VGVVEACHSL 248
++++G +++VMEL GG+ + G + L +++ +E S
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E+ LK DFG+S
Sbjct: 233 CCIHRDLAARNCLVT---EKNVLKISDFGMS 260
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ + GA + V++ MEL GG L I Q G E +A + +E H+
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++H D+K +N L + A L DFG ++ +P
Sbjct: 170 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQP 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKPEN L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPEN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSE 473
E+ + AF FD +G G I DE + Q+ G L D ++E+ ++E D+D +G ID E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 474 FVAMMQDS 481
F+ +++ S
Sbjct: 67 FMDLIKKS 74
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 352 FKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFI 405
FK+ D + G I +E K +Q+VG L D+E++ M+ D D +G +D EF+
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R +G G +G+ + +++ A K ++ R + HL H NVI
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLK-HENVIG 91
Query: 194 IVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
++ + ED V++V L G + I++ ++ L ++ ++ HS
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HRDLKP N + E++ L+ +DFGL+
Sbjct: 150 AGIIHRDLKPSN---VAVNEDSELRILDFGLA 178
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 343 EEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
EE+ L E+FK + + + G I EE + L R N + D + D+ +G ++
Sbjct: 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIE 92
Query: 401 YGEFIAAM--LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL---E 455
+GEF+ ++ H + E + AF +D +G+I +EL+ L +++L E
Sbjct: 93 FGEFVRSLGVFHPSAPVHEKVKF-AFKLYDLRQTGFIEREELKEMVVAL-LHESELVLSE 150
Query: 456 DIIR--------EVDQDNDGRIDYSEF 474
D+I + D+ NDG+ID E+
Sbjct: 151 DMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDSE--LKILDFGL 171
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 70 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 128
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKPEN L IN E +K DFGL+ F G+ R +
Sbjct: 129 RDLKPEN-LLINT--EGAIKLADFGLARAF--GVPVRTY 162
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 188 HPNVIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQRGHYTERKAAD-------LTRII 238
HPN+++ D +++VME C GG+L +I +G ER+ D +T++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVMTQLT 121
Query: 239 VGVVEACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
+ + E CH V+HRDLKP N +Q +K DFGL+ +F
Sbjct: 122 LALKE-CHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSF 172
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 188 HPNVIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQRGHYTERKAAD-------LTRII 238
HPN+++ D +++VME C GG+L +I +G ER+ D +T++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVMTQLT 121
Query: 239 VGVVEACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
+ + E CH V+HRDLKP N +Q +K DFGL+ +F
Sbjct: 122 LALKE-CHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSF 172
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ + GA + V++ MEL GG L I Q G E +A + +E H+
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++H D+K +N L + A L DFG ++ +P
Sbjct: 186 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQP 219
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + + D G + L +++ G+ CHS V+H
Sbjct: 71 LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 129
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 130 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 163
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 127
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKPEN L IN E +K DFGL+ F G+ R +
Sbjct: 128 RDLKPEN-LLINT--EGAIKLADFGLARAF--GVPVRTY 161
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + + D G + L +++ G+ CHS V+H
Sbjct: 70 LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 128
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 129 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 162
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+ ++E F + D D +G I ++ELK ++ +G EI ++ D + +G M
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 400 DYGEFIAAMLH 410
++G+F+ M
Sbjct: 85 NFGDFLTVMTQ 95
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD--DTQLEDIIREVDQDNDGRIDYS 472
+++ + AF FD DG+G I EL+ A + G + +++ +I E+D++ G++++
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 473 EFVAMM 478
+F+ +M
Sbjct: 88 DFLTVM 93
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
D D +GT+D E AM L +++ + S DK+G+G +
Sbjct: 41 DADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 28/168 (16%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA---------- 244
+ +++V E + + T A+ LT I + ++++
Sbjct: 71 LDVIHTENKLYLVFEF----------LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 245 -CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
CHS V+HRDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 121 FCHSHRVLHRDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 163
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI--AKRKLXXXXXXXXXXXXXXXMHHLAGHP---- 189
LGQG FG + +A K I + KL + + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 190 --NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER-KAADLTRIIVGVVEACH 246
N ++ + A + + + ME C L+D I +R + L R I+ + H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S G++HRDLKP N +FI+ E +K DFGL+
Sbjct: 134 SQGIIHRDLKPMN-IFID--ESRNVKIGDFGLA 163
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++I ER + L +++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLC 137
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
LS+ + +K++F+ ID D SGY+ +ELK LQ+ ++ L +SE LM A D D
Sbjct: 35 LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94
Query: 397 GTMDYGEFIAAMLH 410
G + EF M+H
Sbjct: 95 GKIGADEF-QEMVH 107
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLD-----DTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F + D D SGY+ DEL+ Q+F D +++ + ++ D D DG+I EF M+
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 343 EEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
EE+ L E+FK + + + G I EE + L R N + D + D+ +G ++
Sbjct: 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIE 92
Query: 401 YGEFIAAM--LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL---E 455
+GEF+ ++ H + E + AF +D +G+I +EL+ L +++L E
Sbjct: 93 FGEFVRSLGVFHPSAPVHEKVKF-AFKLYDLRQTGFIEREELKEMVVAL-LHESELVLSE 150
Query: 456 DIIR--------EVDQDNDGRIDYSEF 474
D+I + D+ NDG+ID E+
Sbjct: 151 DMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDSE--LKILDFGLA 174
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I ++ + E+ V++VMEL ++I ER + L +++
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLC 135
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 136 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 171
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLA 177
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L +++I +KE F MID + G+I + +LK+ +G D E+ +++ G +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 68
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFD-----KDGSGYITPDELQTACQQFGLDDTQ 453
++ F++ L+ E+ + AF FD K YI D L+ F D+ +
Sbjct: 69 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIK-DLLENMGDNFNKDEMR 127
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSG 482
+ +E + G+ DY FVAM++ SG
Sbjct: 128 M--TFKEAPVEG-GKFDYVRFVAMIKGSG 153
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFV 475
+ + AF FD D +G I+ L+ ++ G L D +L+++I E D+D DG + EF+
Sbjct: 11 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 70
Query: 476 AMMQDSGL 483
+M+ + L
Sbjct: 71 RIMKKTSL 78
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++E ++EEI + FK+ D D +G I+ + LK+ + +G NL D E+ ++ D D
Sbjct: 4 MSEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 396 SGTMDYGEFIAAM 408
G + EF+ M
Sbjct: 61 DGEVSEQEFLRIM 73
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R +G G +G+ + +++ A K ++ R + HL H NVI
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLK-HENVIG 83
Query: 194 IVGAYEDAVAVH----VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + A ++ V + G + I++ ++ L ++ ++ HS G
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKP N + E+ L+ +DFGL+
Sbjct: 144 IIHRDLKPSN---VAVNEDCELRILDFGLA 170
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 20/106 (18%)
Query: 188 HPNVIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQRGHYTERKAAD-------LTRII 238
HPN+++ D +++VME C GG+L +I +G ER+ D +T++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVMTQLT 121
Query: 239 VGVVEACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + E CH V+HRDLKP N +Q +K DFGL+
Sbjct: 122 LALKE-CHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLA 163
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACH 246
P ++Q G + V + MEL G +++ +R G ER L ++ V +V+A +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERI---LGKMTVAIVKALY 138
Query: 247 SL----GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L GV+HRD+KP N L E +K DFG+S
Sbjct: 139 YLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGIS 172
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDSE--LKILDFGLA 178
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y K+G+G +GT F + T + A K + R + H
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELKHK 61
Query: 190 NVIQIVGAYEDAVAVHVVMELC----------AGGELFDRIIQRGHYTERKAADLTRIIV 239
N++++ + +V E C G+L I++ + L +++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK---------SFLFQLLK 112
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
G+ CHS V+HRDLKP+N L IN+ E LK DFGL+ F G+ R +
Sbjct: 113 GL-GFCHSRNVLHRDLKPQN-LLINRNGE--LKLADFGLARAF--GIPVRCY 158
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 117 SVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXX 176
S+ G + G +E L R LG+G FG + V + E ++ K
Sbjct: 1 SMGGPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 60
Query: 177 XXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT- 235
+ HP++++++G E+ ++MEL GEL GHY ER L
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGEL-------GHYLERNKNSLKV 112
Query: 236 -RIIVGVVEAC------HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+++ ++ C S+ +HRD+ N L + + +K DFGLS +
Sbjct: 113 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFGLSRY 162
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 91 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 147
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 191
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 92 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 148
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 192
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 92 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 148
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 192
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLA 177
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 168
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 83 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 139
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLA 183
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 168
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 81
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 82 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 138
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 182
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K DTD SG I EL + G +L + I ++ D +G MD+ F
Sbjct: 76 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNF 134
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I+ ++ L D M+ AF DK+G+G I
Sbjct: 135 ISCLVRL------DAMFRAFRSLDKNGTGQI 159
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
+L + Y LG LG G L + ++ A K + + L
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAA 67
Query: 185 LAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H G++HRD+KP N L +K +DFG++
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATNA---VKVVDFGIA 163
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 312 VRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKG 371
+R+ P S P K +S++ + LKE+F+++D D SG+I +ELK
Sbjct: 15 LRDCQAPDSFSPKKF--------FQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66
Query: 372 LQRV--GANLMD-SEIDGLMQAGDIDNSGTMDYGEF 404
LQR GA ++ SE + A D D G + EF
Sbjct: 67 LQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F D D SG+I DEL+ Q+F L ++ + + D D DG+I EF M+
Sbjct: 47 FRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMV 106
Query: 479 Q 479
Q
Sbjct: 107 Q 107
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI---AKRKLXXXXXXXXXXXXXXXMHHLAGHPNVI 192
+G+G FG +C K K+ A K I ++RK HPN++
Sbjct: 16 VGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVELRQLSR---------VNHPNIV 64
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRII---QRGHYTERKAADLTRIIVGVVEACHSL- 248
++ GA + V + VME GG L++ + +YT A V HS+
Sbjct: 65 KLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 249 --GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKP N L + LK DFG +
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTV--LKICDFGTA 153
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI---AKRKLXXXXXXXXXXXXXXXMHHLAGHPNVI 192
+G+G FG +C K K+ A K I ++RK HPN++
Sbjct: 17 VGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVELRQLSR---------VNHPNIV 65
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRII---QRGHYTERKAADLTRIIVGVVEACHSL- 248
++ GA + V + VME GG L++ + +YT A V HS+
Sbjct: 66 KLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 249 --GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKP N L + LK DFG +
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTV--LKICDFGTA 154
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + +VME G+L+ R++ + H K + R+++ +
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIALGIEY 137
Query: 248 L-----GVMHRDLKPENFLFINQQEEAPL--KTIDFGLS 279
+ ++HRDL+ N + E AP+ K DFGLS
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ + GA + V++ MEL GG L + ++G E +A + +E HS
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++H D+K +N L + A L DFG ++ +P
Sbjct: 186 RILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQP 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 95 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 151
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 195
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 140
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 184
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 178
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G +G + + + Q A K I +R +H H N++Q +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHY-----TERKAADLTRIIVGVVEACHSLGV 250
G++ + + + ME GG L + R + E+ T+ I+ ++ H +
Sbjct: 86 GSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRD+K +N L IN LK DFG S
Sbjct: 144 VHRDIKGDNVL-INTYSGV-LKISDFGTS 170
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 140
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 184
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ + GA + V++ MEL GG L + ++G E +A + +E HS
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++H D+K +N L + A L DFG ++ +P
Sbjct: 205 RILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQP 238
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 177
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 70
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 71 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 127
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 171
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 83 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 139
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 183
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K DTD SG I EL + G +L + I ++ D +G MD+ F
Sbjct: 87 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNF 145
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I+ ++ L D M+ AF DK+G+G I
Sbjct: 146 ISCLVRL------DAMFRAFRSLDKNGTGQI 170
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 168
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 174
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 179
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
LG+G +G + + + Q A K I +R +H H N++Q +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHY-----TERKAADLTRIIVGVVEACHSLGV 250
G++ + + + ME GG L + R + E+ T+ I+ ++ H +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRD+K +N L IN LK DFG S
Sbjct: 130 VHRDIKGDNVL-INTYSGV-LKISDFGTS 156
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRV--GA-NLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F+ ID D SGY+ EELK LQ+ GA L +SE LM A D D G + EF
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
Query: 405 IAAMLH 410
M+H
Sbjct: 104 -QEMVH 108
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 424 FSYFDKDGSGYITPDELQTACQQF-----GLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F + D D SGY+ +EL+ Q+F L +++ + ++ D D DG+I EF M+
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 174
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 17/170 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 449 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKFSLDLASLILYAYQLS 501
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+L + HRD+ N L + +K DFGLS + ++
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYK 548
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 69 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 125
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 169
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 69
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 70 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 126
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 127 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 170
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 75 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 133
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 134 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 167
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 72 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 130
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 131 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 164
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G + I++ T+
Sbjct: 91 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 191
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 69 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 125
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 169
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L +++I +KE F MID D G+++ E++K +++G D E+ +++ G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 56
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSG-----YITPDELQTACQQFGLDDTQ 453
++ F++ L+ E+ + AF+ FD+ + YI D L+ F D+ +
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIK-DLLENMGDNFNKDEMR 115
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ +E + G+ DY +F AM++
Sbjct: 116 M--TFKEAPVEG-GKFDYVKFTAMIK 138
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E + + + +G+G FG + K T++ +A K + K ++ + +
Sbjct: 73 REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL--VN 130
Query: 187 GHPNVIQIVG-AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG----V 241
G I + A++D +++VM+ GG+L + + ++ D+ R +G
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGEMVLA 187
Query: 242 VEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
+++ H L +HRD+KP+N L +N ++ DFG
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGH----IRLADFG 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 174
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 79 LRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 179
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 95 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 151
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 195
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K DTD SG I EL + G +L + I ++ D +G MD+ F
Sbjct: 87 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNF 145
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I+ ++ L D M+ AF DK+G+G I
Sbjct: 146 ISCLVRL------DAMFRAFRSLDKNGTGQI 170
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 71 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 129
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 130 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 163
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 177
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E + + + +G+G FG + K T++ +A K + K ++ + +
Sbjct: 89 REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL--VN 146
Query: 187 GHPNVIQIVG-AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG----V 241
G I + A++D +++VM+ GG+L + + ++ D+ R +G
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGEMVLA 203
Query: 242 VEACHSLGVMHRDLKPENFLF-INQQEEAPLKTIDFG 277
+++ H L +HRD+KP+N L +N ++ DFG
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGH----IRLADFG 236
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 70 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 128
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 129 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 162
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL-SFCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 6/149 (4%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
+G G+FG KA K+ +C +I K + HPN+I++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 196 GAYEDAVAVHVVMELCAGGEL--FDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
G +++ V ++ E G L F R + G +T + + R I + + +HR
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFF 282
DL N L K DFGLS F
Sbjct: 141 DLAARNILV---NSNLVCKVSDFGLSRFL 166
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 79 LRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 179
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 92 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 148
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 192
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 127
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 128 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 161
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 71 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 129
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 130 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 163
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 70 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 128
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 129 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 162
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 178
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 79 LRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 179
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 172
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 72 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 130
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 131 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 164
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 6/149 (4%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIV 195
+G G+FG KA K+ +C +I K + HPN+I++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 196 GAYEDAVAVHVVMELCAGGEL--FDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
G +++ V ++ E G L F R + G +T + + R I + + +HR
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFF 282
DL N L K DFGLS F
Sbjct: 143 DLAARNILV---NSNLVCKVSDFGLSRFL 168
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 40/59 (67%)
Query: 352 FKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
F++ D +++G +++ +L+ L +G L D+E+D L++ ++D++G +DY +FI +L
Sbjct: 11 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 69
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K +TD SG I EL + G +L + I ++ D +G MD+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNF 861
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I+ ++ L D M+ AF DK+G+G I
Sbjct: 862 ISCLVRL------DAMFRAFRSLDKNGTGQI 886
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACH 246
HPN+++++ A+ + +++E CAGG + +++ TE + + + + + H
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLK N LF + +K DFG+S
Sbjct: 126 DNKIIHRDLKAGNILF---TLDGDIKLADFGVS 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 75 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 133
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 134 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 167
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 127
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 128 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 161
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 125
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 126 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 159
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 188 HPNVIQIVGAY--EDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H NVIQ+V E+ +++VME C G E+ D + ++ + ++I G+ E
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGL-E 123
Query: 244 ACHSLGVMHRDLKPENFLF 262
HS G++H+D+KP N L
Sbjct: 124 YLHSQGIVHKDIKPGNLLL 142
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 125
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 126 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 159
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 125
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 126 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 159
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 28/168 (16%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA---------- 244
+ +++V E + + T A+ LT I + ++++
Sbjct: 67 LDVIHTENKLYLVFEH----------VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 245 -CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
CHS V+HRDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 117 FCHSHRVLHRDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 159
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+KE F MID + G+I + +LK+ +G D E+ +++ G +++ F++
Sbjct: 4 MKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMFLSI 59
Query: 408 ML-HLNKIQREDHMYAAFSYFDKDGSGYIT----PDELQTACQQFGLDDTQLEDIIREVD 462
L+ E+ + AF FD+D + + D L+ F D+ ++ +E
Sbjct: 60 FSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRM--TFKEAP 117
Query: 463 QDNDGRIDYSEFVAMMQ 479
+ G+ DY FVAM++
Sbjct: 118 VEG-GKFDYVRFVAMIK 133
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++K
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRE 83
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 140
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 184
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++FK ID D SG+I EELK K G +L D+E ++A D D G + EF
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 387 LMQAGDIDNS-------GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDE 439
L++A DI + G+ ++ +F A ++ L + D + F D D SG+I +E
Sbjct: 6 LLKADDIKKALDAVKAEGSFNHKKFFA-LVGLKAMSAND-VKKVFKAIDADASGFIEEEE 63
Query: 440 LQTACQQFGLD-----DTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
L+ + F D D + + ++ D+D DG+I EF ++ ++
Sbjct: 64 LKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI--AKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
LG+GQF T + +K T + A K I R + L+ HPN+I
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIG 76
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV--VEACHSLGVM 251
++ A+ + +V + + II+ + +++ + +E H ++
Sbjct: 77 LLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
HRDLKP N L E LK DFGL+ F
Sbjct: 135 HRDLKPNNLLL---DENGVLKLADFGLAKSF 162
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 125
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 126 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 159
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + + + A K ++ R
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRE 100
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 101 LRLLKHMK-HENVIGLLDVFTPATSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 157
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 158 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 127
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 128 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 161
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ--RVGAN-LMDSEIDGLMQAGDIDNS 396
LS + +K+ F ID D SG+I +ELK LQ + GA L D+E ++AGD D
Sbjct: 36 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 95
Query: 397 GTMDYGEFIA 406
G + E++A
Sbjct: 96 GAIGVEEWVA 105
Score = 42.0 bits (97), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF-----GLDDTQLEDIIREVDQDNDGRIDYS 472
D + AF + D+D SG+I DEL+ Q F L D + + ++ D D DG I
Sbjct: 42 DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVE 101
Query: 473 EFVAMMQ 479
E+VA+++
Sbjct: 102 EWVALVK 108
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ--RVGAN-LMDSEIDGLMQAGDIDNS 396
LS + +K+ F ID D SG+I +ELK LQ + GA L D+E ++AGD D
Sbjct: 35 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 94
Query: 397 GTMDYGEFIA 406
G + E++A
Sbjct: 95 GAIGVEEWVA 104
Score = 42.0 bits (97), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF-----GLDDTQLEDIIREVDQDNDGRIDYS 472
D + AF + D+D SG+I DEL+ Q F L D + + ++ D D DG I
Sbjct: 41 DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVE 100
Query: 473 EFVAMMQ 479
E+VA+++
Sbjct: 101 EWVALVK 107
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 43/177 (24%)
Query: 122 KTGNLKEM-YSLGRKLGQGQFGTTFLCV-----EKATQKEFACKSIAKRKLXXXXXXXXX 175
KTG +E+ Y+ + +G G FG F E A +K K R+L
Sbjct: 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ-------- 84
Query: 176 XXXXXXMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRG--HYT 227
+ + HPNV+ + + +D V +++V+E + R HY
Sbjct: 85 ------IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP------ETVYRASRHYA 132
Query: 228 ERKAADLTRII-------VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ K +I + + HS+G+ HRD+KP+N L LK IDFG
Sbjct: 133 KLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFG 187
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLA 178
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPNVI+ +D ++ +ELCA L + + Q+ H L + G+
Sbjct: 77 HPNVIRYFCTEKDRQFQYIAIELCAAT-LQEYVEQKDFAHLGLEPITLLQQTTSGLAHL- 134
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTI--DFGL 278
HSL ++HRDLKP N L +K + DFGL
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 69 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKFSLDLASLILYAYQLS 121
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 160
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 69 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 121
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 160
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 19/93 (20%)
Query: 337 AESLSEEEIAGLKEM-------------------FKMIDTDNSGYITLEELKKGLQRVGA 377
A SL+ ++I GL E+ F++ D +++G +++ +L+ L +G
Sbjct: 55 ASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE 114
Query: 378 NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
L D+E+D L++ ++D++G +DY +FI +L
Sbjct: 115 KLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 69 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 121
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 160
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 12 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 71
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 72 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 124
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 163
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K D D SG I EL + G +L + + ++ D G MD+ F
Sbjct: 76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHL-NEHLYSMIIRRYSDEGGNMDFDNF 134
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I+ ++ L D M+ AF DKDG+G I
Sbjct: 135 ISCLVRL------DAMFRAFKSLDKDGTGQI 159
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 20/165 (12%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
+L + Y LG LG G L + ++ A K + + L
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRREAQNAA 67
Query: 185 LAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV------ 121
Query: 241 VVEACHSL------GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +AC +L G++HRD+KP N + +K +DFG++
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIA 163
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 73
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 74 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 126
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 165
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 37 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 96
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 97 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 149
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 188
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 31/178 (17%)
Query: 127 KEM--YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
KEM + + R GQG FGT L EK+T A K + + M
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-------DPRFRNRELQIMQD 72
Query: 185 LA--GHPNVIQIVGAY-------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
LA HPN++Q+ + + ++VVME + R R +Y + A
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCC-RNYYRRQVAPPPI 129
Query: 236 RIIVGVVEACHSLG--------VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
I V + + S+G V HRD+KP N L + + LK DFG + P
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPS 185
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 17/170 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 449 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKFSLDLASLILYAYQLS 501
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+L + HRD+ N L +K DFGLS + ++
Sbjct: 502 TALAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYK 548
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 66 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 118
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 157
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 11 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 70
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 71 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKYSLDLASLILYAYQLS 123
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L + +K DFGLS +
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRY 162
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+++I +KE F MID D G+++ E++K +++G D E+ +++ G +++
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNF 57
Query: 402 GEFIAAML-HLNKIQREDHMYAAFSYFDKDGSG-----YITPDELQTACQQFGLDDTQLE 455
F++ L+ E+ + AF+ FD+ + YI D L+ F D+ ++
Sbjct: 58 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIK-DLLENMGDNFNKDEMRM- 115
Query: 456 DIIREVDQDNDGRIDYSEFVAMMQDS 481
+E + G+ DY +F AM++ S
Sbjct: 116 -TFKEAPVEG-GKFDYVKFTAMIKGS 139
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 19/184 (10%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
+ SS+ + SV GR +YS+ +++G G F + + Q +A K + +
Sbjct: 42 KASSSANECISVKGR-------IYSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE- 92
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVA---VHVVMELCAGGELFDRIIQR 223
++ L H + +I+ Y+ + +++VME C +L + ++
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSD--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK 149
Query: 224 GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+ + ++ V H G++H DLKP NFL + + LK IDFG++ +
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQ 205
Query: 284 PGLT 287
P T
Sbjct: 206 PDTT 209
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED-----IIREVDQDNDGRI 469
+ D + AF+ D+D SG+I DEL+ Q F D L D ++ D D DG+I
Sbjct: 39 KSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKI 98
Query: 470 DYSEFVAMMQ 479
EF A+++
Sbjct: 99 GVDEFTALVK 108
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
L+ + +K+ F +ID D SG+I +ELK LQ A+ L D E ++AGD D
Sbjct: 36 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 95
Query: 397 GTMDYGEFIA 406
G + EF A
Sbjct: 96 GKIGVDEFTA 105
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
+L + Y LG LG G L + ++ A K + + L
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAA 67
Query: 185 LAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H G++HRD+KP N + +K +DFG++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIA 163
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 27/174 (15%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
+ Y K+G+G +GT F + T + A K + R +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELK 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELC----------AGGELFDRIIQRGHYTERKAADLTRI 237
H N++++ + +V E C G+L I++ + L ++
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK---------SFLFQL 110
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
+ G+ CHS V+HRDLKP+N L IN+ E LK +FGL+ F G+ R +
Sbjct: 111 LKGL-GFCHSRNVLHRDLKPQN-LLINRNGE--LKLANFGLARAF--GIPVRCY 158
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +D+GL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDYGLA 172
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 10/151 (6%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPN 190
++ KLG GQ+G ++ V K A K++ + + HPN
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPN 89
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFD--RIIQRGHYTERKAADLTRIIVGVVEACHSL 248
++Q++G ++V E G L D R R T + I +E
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E +K DFGLS
Sbjct: 150 NFIHRDLAARNCLV---GENHVVKVADFGLS 177
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
+L + Y LG LG G L + ++ A K + + L
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAA 67
Query: 185 LAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H G++HRD+KP N + +K +DFG++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIA 163
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
+ SS+ + SV GR +YS+ +++G G F + + Q +A K + +
Sbjct: 42 KASSSANECISVKGR-------IYSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE- 92
Query: 167 XXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVA---VHVVMELCAGGELFDRIIQR 223
++ L H + +I+ Y+ + +++VME C +L + ++
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSD--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK 149
Query: 224 GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+ + ++ V H G++H DLKP NFL + + LK IDFG++ +
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQ 205
Query: 284 PGLTFRV 290
P T V
Sbjct: 206 PDTTSVV 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+++VME C +L + ++ + + ++ V H G++H DLKP NFL +
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189
Query: 264 NQQEEAPLKTIDFGLSMFFRPGLTFRV 290
+ LK IDFG++ +P T V
Sbjct: 190 ----DGMLKLIDFGIANQMQPDTTSVV 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 17/162 (10%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E LGR +G+GQFG + + + +I K
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK-AADLTRIIVGVVEAC 245
HP++++++G + V ++MELC GEL R RK + DL +I+ +
Sbjct: 69 DHPHIVKLIGVITEN-PVWIIMELCTLGEL------RSFLQVRKFSLDLASLILYAYQLS 121
Query: 246 HSLGVM------HRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+L + HRD+ N L +K DFGLS +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRY 160
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y A + +V + C G L+ + + +K D+ R ++ H
Sbjct: 79 HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 138 AKSIIHRDLKSNNIFL---HEDNTVKIGDFGLA 167
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
+L + Y LG LG G L + ++ A K + + L
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRREAQNAA 67
Query: 185 LAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H G++HRD+KP N + +K +DFG++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIA 163
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKG--LQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LKE+F++ D + ++ K G + +G N + ++ G G
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDV---FAVGGTHKMG 59
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTYADYM-EAFKTFDREGQGFISGAELRHVLSGLGERLS 118
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D ++++II D +D +G + Y EFV
Sbjct: 119 DEEVDEIINLTDLQEDLEGNVKYEEFV 145
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYGE 403
A E FK D + G+I+ EL+ L +G L D E+D ++ D+ D G + Y E
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 143
Query: 404 FIAAML 409
F+ ++
Sbjct: 144 FVKKVM 149
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A K I R + HPN++++
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 71 LDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 129
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 130 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 163
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKG--LQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LKE+F++ D + ++ K G + +G N + ++ G G
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDV---FAVGGTHKMG 60
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 61 EKSLPFEEFLPAYEGLMDCEQGTYADYM-EAFKTFDREGQGFISGAELRHVLSGLGERLS 119
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D ++++II D +D +G + Y EFV
Sbjct: 120 DEEVDEIINLTDLQEDLEGNVKYEEFV 146
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYGE 403
A E FK D + G+I+ EL+ L +G L D E+D ++ D+ D G + Y E
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 144
Query: 404 FIAAML 409
F+ ++
Sbjct: 145 FVKKVM 150
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
+L + Y LG LG G L + ++ A K + + L
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRREAQNAA 84
Query: 185 LAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 85 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H G++HRD+KP N + +K +DFG++
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIA 180
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
L+E F++ D + +GYI+ + +++ L + L ++D ++ D D SGT+D+ EF+
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 408 M 408
M
Sbjct: 65 M 65
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT----QLEDIIREVDQDNDGRIDYSEFVAMM 478
AF +DK+G+GYI+ D ++ + LD+T L+ +I E+D D G +D+ EF+ +M
Sbjct: 8 AFRLYDKEGNGYISTDVMREILAE--LDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVM 65
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXX 180
R N+ + L LG+G +G K T + A K I
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIK 61
Query: 181 XMHHLAGHPNVIQIVG-----AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ H H N+I I ++E+ V+++ EL R+I ++
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ V+ H V+HRDLKP N L IN + LK DFGL+
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD--LKVCDFGLA 159
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
VG+ + +V++V E ++++G E A ++ ++ HS V+HRD
Sbjct: 88 VGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRD 145
Query: 255 LKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
LKP N LFIN E+ LK DFGL+ P
Sbjct: 146 LKPAN-LFIN-TEDLVLKIGDFGLARIMDP 173
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+++VME C +L + ++ + + ++ V H G++H DLKP NFL +
Sbjct: 84 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 142
Query: 264 NQQEEAPLKTIDFGLSMFFRPGLT 287
+ LK IDFG++ +P T
Sbjct: 143 ----DGMLKLIDFGIANQMQPDTT 162
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 188 HPNVIQIVGAYE------DAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
HP+++QI E D V ++VME G L Q+ E A L I+
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVG-YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLE--ILPA 194
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ HS+G+++ DLKPEN + +Q LK ID G
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLG 226
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXX 180
R N+ + L LG+G +G K T + A K I
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIK 61
Query: 181 XMHHLAGHPNVIQIVG-----AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ H H N+I I ++E+ V+++ EL R+I ++
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ V+ H V+HRDLKP N L IN + LK DFGL+
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD--LKVCDFGLA 159
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSG 397
SEE+ A KE F++ D G I + ++ +G N ++E+ ++ D N
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 398 TMDYGEFIAAMLHL--NKIQR--EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
T+ + +F+ M + NK Q ED++ FDK+G+G + E++ G + +
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 119
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMM 478
++E ++ +D++G I+Y E V M+
Sbjct: 120 EEVEQLVAG-HEDSNGCINYEELVRMV 145
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+++VME C +L + ++ + + ++ V H G++H DLKP NFL +
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161
Query: 264 NQQEEAPLKTIDFGLSMFFRPGLT 287
+ LK IDFG++ +P T
Sbjct: 162 ----DGMLKLIDFGIANQMQPDTT 181
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXX 180
R N+ + L LG+G +G K T + A K I
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIK 61
Query: 181 XMHHLAGHPNVIQIVG-----AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
+ H H N+I I ++E+ V+++ EL R+I ++
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ V+ H V+HRDLKP N L IN + LK DFGL+
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD--LKVCDFGLA 159
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+KE F MID + G+I + +LK+ +G D E+ +++ G +++ F++
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFLSI 80
Query: 408 ML-HLNKIQREDHMYAAFSYFDKDGSGYIT----PDELQTACQQFGLDDTQLEDIIREVD 462
L+ E+ + AF FD+ + + D L+ F D+ ++ +E
Sbjct: 81 FSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM--TFKEAP 138
Query: 463 QDNDGRIDYSEFVAMMQDSG 482
+ G+ DY FVAM++ SG
Sbjct: 139 VEG-GKFDYVRFVAMIKGSG 157
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL-KKGLQRVGANLMDSE---------IDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K + A L + ++ + ++
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 399 MDYGEFI-----AAMLHLNKIQREDHMY------AAFSYFDKDGSGYITPDELQTACQQF 447
+ + +F+ A L K R + A F FDKDGSG IT DE + +
Sbjct: 83 IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142
Query: 448 GLDDTQ--LEDIIREVDQDNDGRIDYSEFV 475
G+ +Q E R D DN G +D E
Sbjct: 143 GISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL-KKGLQRVGANLMDSE---------IDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K + A L + ++ + ++
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 399 MDYGEFI-----AAMLHLNKIQREDHMY------AAFSYFDKDGSGYITPDELQTACQQF 447
+ + +F+ A L K R + A F FDKDGSG IT DE + +
Sbjct: 83 IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142
Query: 448 GLDDTQ--LEDIIREVDQDNDGRIDYSEFV 475
G+ +Q E R D DN G +D E
Sbjct: 143 GISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+++VME C +L + ++ + + ++ V H G++H DLKP NFL +
Sbjct: 87 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 145
Query: 264 NQQEEAPLKTIDFGLSMFFRPGLT 287
+ LK IDFG++ +P T
Sbjct: 146 ----DGMLKLIDFGIANQMQPDTT 165
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+KE F MID + G+I + +LK+ +G D E+ +++ G +++ F++
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFLSI 80
Query: 408 ML-HLNKIQREDHMYAAFSYFDKDGSGYIT----PDELQTACQQFGLDDTQLEDIIREVD 462
L+ E+ + AF FD+ + + D L+ F D+ ++ +E
Sbjct: 81 FSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM--TFKEAP 138
Query: 463 QDNDGRIDYSEFVAMMQDSG 482
+ G+ DY FVAM++ SG
Sbjct: 139 VEG-GKFDYVRFVAMIKGSG 157
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 58/165 (35%), Gaps = 20/165 (12%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX---XXXXXXXXXMHHLAGH 188
G+ LG G FG KE A +A + L M HL H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-----------DLTRI 237
N++ ++GA V V+ E C G+L + + ++ E A DL
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 238 IVGVVEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V + L +HRD+ N L N K DFGL+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLA 211
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGT 398
E EI KE F +ID + G I ++L++ +G N+ + E+D +++ + SG
Sbjct: 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGP 56
Query: 399 MDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
+++ F+ L ED + AF D DG G I L+ G +++
Sbjct: 57 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIK 116
Query: 456 DIIREVDQDNDGRIDY 471
++ D G +DY
Sbjct: 117 NMWAAFPPDVAGNVDY 132
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + +VME G+L+ R++ + H K + R+++ +
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIALGIEY 137
Query: 248 L-----GVMHRDLKPENFLFINQQEEAPL--KTIDFGLS 279
+ ++HRDL+ N + E AP+ K DFG S
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSG 397
SEE+ A KE F++ D G I + ++ +G N ++E+ ++ D N
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 398 TMDYGEFIAAMLHL--NKIQR--EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
T+ + +F+ M + NK Q ED++ FDK+G+G + E++ G + +
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 121
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMM 478
++E ++ +D++G I+Y E V M+
Sbjct: 122 EEVEQLVAG-HEDSNGCINYEELVRMV 147
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 58/165 (35%), Gaps = 20/165 (12%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX---XXXXXXXXXMHHLAGH 188
G+ LG G FG KE A +A + L M HL H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-----------DLTRI 237
N++ ++GA V V+ E C G+L + + ++ E A DL
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 238 IVGVVEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V + L +HRD+ N L N K DFGL+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLA 211
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL-KKGLQRVGANLMDSE---------IDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K + A L + ++ + ++
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 399 MDYGEFI-----AAMLHLNKIQREDHMY------AAFSYFDKDGSGYITPDELQTACQQF 447
+ + +F+ A L K R + A F FDKDGSG IT DE + +
Sbjct: 83 IAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142
Query: 448 GLDDTQ--LEDIIREVDQDNDGRIDYSEFV 475
G+ +Q E R D DN G +D E
Sbjct: 143 GISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + +VME G+L+ R++ + H K + R+++ +
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIALGIEY 137
Query: 248 L-----GVMHRDLKPENFLFINQQEEAPL--KTIDFGLS 279
+ ++HRDL+ N + E AP+ K DF LS
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+++VME C +L + ++ + + ++ V H G++H DLKP NFL +
Sbjct: 83 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 141
Query: 264 NQQEEAPLKTIDFGLSMFFRPGLT 287
+ LK IDFG++ +P T
Sbjct: 142 ----DGMLKLIDFGIANQMQPDTT 161
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF-----GLDDTQLEDIIREVDQDNDGRIDYS 472
D + AF D+D SG+I DEL+ Q F L D + + + + D+D DG I
Sbjct: 41 DDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVD 100
Query: 473 EFVAMMQ 479
EF AM++
Sbjct: 101 EFAAMIK 107
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
L+ + + +K+ F +ID D SG+I +ELK LQ + L D+E + GD D
Sbjct: 35 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 94
Query: 397 GTMDYGEFIAAML 409
G + EF AAM+
Sbjct: 95 GMIGVDEF-AAMI 106
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LK++F++ D G + +L + +G N + ++ G G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMG 59
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLSGLGERLS 118
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D ++++II D +D +G + Y EFV
Sbjct: 119 DEEVDEIINLTDLQEDLEGNVKYEEFV 145
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D E+D ++ D+ D G + Y
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYE 142
Query: 403 EFIAAML 409
EF+ ++
Sbjct: 143 EFVKKVM 149
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y A + +V + C G L+ + I + K D+ R ++ H
Sbjct: 63 HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 122 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 151
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGT 398
+ +I KE F +ID + G I ++L++ +G N+ + E+D +++ SG
Sbjct: 6 FDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGP 61
Query: 399 MDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ----TACQQFGLDDTQ 453
+++ F+ L ED + AF D DG G I L+ T C +F + +
Sbjct: 62 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPE--E 119
Query: 454 LEDIIREVDQDNDGRIDY 471
++++ D G +DY
Sbjct: 120 IKNMWAAFPPDVAGNVDY 137
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGE 403
+I +KE F MID D G+++ E++K +++G D E+ +++ G +++
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTM 57
Query: 404 FIAAML-HLNKIQREDHMYAAFSYFDKDGSGYIT----PDELQTACQQFGLDDTQLEDII 458
F++ L+ E+ + AF+ FD+ + + D L+ F D+ ++
Sbjct: 58 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM--TF 115
Query: 459 REVDQDNDGRIDYSEFVAMMQ 479
+E + G+ DY +F AM++
Sbjct: 116 KEAPVEG-GKFDYVKFTAMIK 135
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y +KLG+G F L VE F KR L MH L HP
Sbjct: 31 YLFIQKLGEGGFSYVDL-VEGLHDGHFYA---LKRILCHEQQDREEAQREADMHRLFNHP 86
Query: 190 NVIQIV-------GAYEDAVAVHVVMELCAGGELF---DRIIQRGHY-TERKAADLTRII 238
N++++V GA +A +++ G L+ +R+ +G++ TE + L I
Sbjct: 87 NILRLVAYCLRERGAKHEAW---LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 239 VGVVEACHSLGVMHRDLKPENFLF 262
+EA H+ G HRDLKP N L
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILL 167
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
M+ IDTD GY++L E K LQ VG +L D + D + +G + EF+ +
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTV 164
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT-QLEDIIREVDQDNDGRIDYSEFVA 476
D M F FD +G G I+ EL A + G +++ ++ E+D D DG ID++EF++
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 477 MMQ-DSGLGKKVFK 489
+ GL K V K
Sbjct: 63 FCNANPGLMKDVAK 76
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
++ +FK DT+ G I+L EL L+ +G+ D E+ +M D D G +D+ EFI+
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL-KKGLQRVGANLMDSE---------IDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K + A L + ++ + ++
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 399 MDYGEFI-----AAMLHLNKIQREDHMY------AAFSYFDKDGSGYITPDELQTACQQF 447
+ + +F+ A L K R + A F FDKDGSG IT DE + +
Sbjct: 83 IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142
Query: 448 GLDDTQ--LEDIIREVDQDNDGRIDYSEFV 475
G+ +Q E R D DN G +D E
Sbjct: 143 GISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
I + L ++ F +D D G+I
Sbjct: 133 IQGCIVLQRLT------DIFRRYDTDQDGWI 157
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 41/166 (24%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
L +F+ +D D SG I+ EL++ L + ++ D +N +++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ--------------------- 445
++ Q F +D+D SG I +EL+ A
Sbjct: 69 VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQ 122
Query: 446 ---QFGLDD--------TQLEDIIREVDQDNDG--RIDYSEFVAMM 478
Q DD +L DI R D D DG ++ Y ++++M+
Sbjct: 123 GRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 168
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ---FGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ F DKD SG I+ ELQ A + + II D++N +++SE
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 65
Query: 474 FVAMMQDSGLGKKVFK 489
F + + + VF+
Sbjct: 66 FTGVWKYITDWQNVFR 81
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +DF L+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFYLA 172
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A I R + HPN++++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 126
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 127 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 160
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
K+G+G +G + K T + A I R + HPN++++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 195 VGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ +++V E + D G + L +++ G+ CHS V+H
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLH 125
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
RDLKP+N L IN E +K DFGL+ F G+ R +
Sbjct: 126 RDLKPQN-LLINT--EGAIKLADFGLARAF--GVPVRTY 159
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 340 LSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNS 396
S EI L E+FK I + + G I EE + L + N +S D + D ++
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHN 68
Query: 397 GTMDYGEFIAAM--LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT------ACQQFG 448
G + + EF A+ H N +D ++ +F +D G+I E++ A
Sbjct: 69 GILGFEEFARALSVFHPNA-PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN 127
Query: 449 LDDTQLEDII----REVDQDNDGRIDYSEFVAMM 478
L DT +EDII E D +DG+ID E+ +++
Sbjct: 128 LKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 161
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 122
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V++E C G L + +R + K A DL + +
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 232
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT-QLEDIIREVDQDNDGRIDYSEFVA 476
D M F FD +G G I+ EL A + G +++ ++ E+D D DG ID++EF++
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 477 MMQ-DSGLGKKVFK 489
+ GL K V K
Sbjct: 62 FCNANPGLMKDVAK 75
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406
++ +FK DT+ G I+L EL L+ +G+ D E+ +M D D G +D+ EFI+
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V++E C G L + +R + K A DL + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 195
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V++E C G L + +R + K A DL + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 195
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 10/151 (6%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPN 190
++ KLG GQFG + V K A K++ + + HPN
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE-----IKHPN 68
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFD--RIIQRGHYTERKAADLTRIIVGVVEACHSL 248
++Q++G +++ E G L D R R + + I +E
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E +K DFGLS
Sbjct: 129 NFIHRDLAARNCLV---GENHLVKVADFGLS 156
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V++E C G L + +R + K A DL + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 195
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 181 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACH 246
HPNVI + G + V ++ E G L + Q G +T + + R I ++
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ +HRDL N L K DFGLS F
Sbjct: 153 DMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFL 185
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
L+ + +K+ F +ID D SG+I +ELK LQ A L D+E ++AGD D
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95
Query: 397 GTMDYGEFIA 406
G + E+ A
Sbjct: 96 GAIGVDEWAA 105
Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF-----GLDDTQLEDIIREVDQDNDGRIDYS 472
D + AF D+D SG+I DEL+ Q F L D + + ++ D D DG I
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVD 101
Query: 473 EFVAMMQ 479
E+ A+++
Sbjct: 102 EWAALVK 108
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+++VME C +L + ++ + + ++ V H G++H DLKP NFL +
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161
Query: 264 NQQEEAPLKTIDFGLSMFFRP 284
+ LK IDFG++ +P
Sbjct: 162 ----DGMLKLIDFGIANQMQP 178
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE+ +KE F + DT+ +G I ELK ++ +G ++ EI LM D + +G +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 400 DYGEFIAAM 408
+ +F+ M
Sbjct: 61 GFDDFLDIM 69
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLE--DIIREVDQDNDGRIDYSEFVAMM 478
AF FD + +G I EL+ A + G D + E +++ E D++ +G I + +F+ +M
Sbjct: 12 AFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIM 69
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE+ L+++F SG + ++LK+ L + + + + L + D G M
Sbjct: 116 LSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRM 175
Query: 400 DYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED-II 458
Y +A L + A F D + +G ++ E + + G D ++D +
Sbjct: 176 SYITLVAVANDLAA------LVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALF 229
Query: 459 REVDQDNDGRIDYSEFVAM 477
R D+D + +SE+V +
Sbjct: 230 RYADEDESDDVGFSEYVHL 248
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDS---EIDGLMQAGDIDNSGTMDYGEF 404
L+ ++ D D SG ++ EE++K L+ A++ +S + + D+D+S ++ Y EF
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLE--DAHIPESARKKFEHQFSVVDVDDSKSLSYQEF 312
Query: 405 IAAML 409
+ +L
Sbjct: 313 VMLVL 317
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 184 HLAGHPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V++E C G L + +R + K A DL + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 186
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 340 LSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNS 396
S EI L E+FK I + + G I EE + L + N +S D + D ++
Sbjct: 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHN 99
Query: 397 GTMDYGEFIAAM--LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT------ACQQFG 448
G + + EF A+ H N +D ++ +F +D G+I E++ A
Sbjct: 100 GILGFEEFARALSVFHPNA-PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN 158
Query: 449 LDDTQLEDII----REVDQDNDGRIDYSEFVAMM 478
L DT +EDII E D +DG+ID E+ +++
Sbjct: 159 LKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED-----IIREVDQDNDGRI 469
+ D + AF+ D+D SG+I DEL+ Q F D L D ++ D D DG+I
Sbjct: 38 KSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKI 97
Query: 470 DYSEFVAMMQ 479
E+ A+++
Sbjct: 98 GVDEWTALVK 107
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
L+ + +K+ F +ID D SG+I +ELK LQ A+ L D E ++AGD D
Sbjct: 35 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 397 GTMDYGEFIA 406
G + E+ A
Sbjct: 95 GKIGVDEWTA 104
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 138 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 171
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 146 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 179
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+E + + + +G+G FG + K K FA K + K ++ + +
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--VN 130
Query: 187 GHPNVIQIVG-AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGV 241
G I + A++D +++VM+ GG+L + + +R ++ R +V
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVIA 187
Query: 242 VEACHSLGVMHRDLKPENFL 261
+++ H L +HRD+KP+N L
Sbjct: 188 IDSVHQLHYVHRDIKPDNIL 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V++E C G L + +R + K A DL + +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ CH V+HRDLKP+N L IN++ E LK DFGL+ F
Sbjct: 113 IAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAF 150
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ CH V+HRDLKP+N L IN++ E LK DFGL+ F
Sbjct: 113 IAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAF 150
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK + FGL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILGFGLA 172
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ CH V+HRDLKP+N L IN++ E LK DFGL+ F
Sbjct: 113 IAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAF 150
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + + +K D+ R ++ H
Sbjct: 79 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 138 AKSIIHRDLKSNNIFL---HEDNTVKIGDFGLA 167
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 206 VVMELCAGGELFDRIIQRGHYT--ERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
+VME C G + D I T E A + R I+ + H V+HRD+K +N L
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 264 NQQEEAPLKTIDFGLS 279
E A +K +DFG+S
Sbjct: 164 ---ENAEVKLVDFGVS 176
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LK++F++ D G + +L + +G N + ++ G G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMG 59
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D +++II+ D +D +G + Y +FV
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 142
Query: 403 EFIAAML 409
+F+ ++
Sbjct: 143 DFVKKVM 149
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 184 HLAGHPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V+ E C G L + +R + K A DL + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 186
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 119 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 119 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 152
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 184 HLAGHPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V+ E C G L + +R + K A DL + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 186
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 119 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 152
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+++MF+ D + GYI E L V +D ++ + D+D +G +D GE +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 408 MLHLNKIQR-------EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIRE 460
+ + I R E+ F D +G G ++ +E Q+ D L DI+
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK----DEVLLDILTR 169
Query: 461 VDQDNDGRIDYSEFVAMMQDSG 482
+D + V ++Q+ G
Sbjct: 170 -------SLDLTHIVKLIQNDG 184
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYFDKDGS-GYITPDELQTACQQFGLDDT--QLEDIIRE 460
+ AA+ L + Q+ + AAF F +D G I+ EL + G + T +L+++I E
Sbjct: 5 YKAAVEQLTEEQK-NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDE 63
Query: 461 VDQDNDGRIDYSEFVAMM 478
VD+D G +D+ EF+ MM
Sbjct: 64 VDEDGSGTVDFDEFLVMM 81
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + D G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHLNK 413
D SGT+D+ EF+ M+ K
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMK 86
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 119 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 152
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL----------KKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K G ++ + +D
Sbjct: 26 KFMFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKE 85
Query: 399 MDYGEFIAAMLHLNK------IQREDHMY-----AAFSYFDKDGSGYITPDELQTACQQF 447
+++ F+ L K Q + + A F FDKDGSG I+ DE +T
Sbjct: 86 VEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGIS 145
Query: 448 GL--DDTQLEDIIREVDQDNDGRIDYSE 473
G+ D E + D DN G++D E
Sbjct: 146 GICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K C+++A + L +
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA--DLTRIIV 239
H+ H NV+ ++GA + + V+ E C G L + +R + K A DL + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 240 GVVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 186
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ +LG+ LG+G FG K C+++A + L +
Sbjct: 27 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 86
Query: 184 HLAGHPNVIQIVGAY-EDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAA-DLTRIIVG 240
H+ H NV+ ++GA + + V++E C G L + +R + K DL + +
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 241 VVE-ACHSLGV------------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ C+S V +HRDL N L E+ +K DFGL+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA 195
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ ++ ++ + + F +D D SG + + EL G G L +M+ D D
Sbjct: 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDF 100
Query: 396 SGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE 455
+G + + EF+A + + Y F D++ SG + P E+ A QQ G Q
Sbjct: 101 NGHISFYEFMAMYKFM------ELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQRT 154
Query: 456 DII 458
++
Sbjct: 155 SLL 157
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 119 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 152
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + + +K D+ R ++ H
Sbjct: 67 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 125
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 126 AKSIIHRDLKSNNIFL---HEDNTVKIGDFGLA 155
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVV 242
H P ++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 122 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 155
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LK++F++ D G + +L + +G N + ++ G G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMG 59
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D +++II+ D +D +G + Y +FV
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 142
Query: 403 EFIAAML 409
+F+ ++
Sbjct: 143 DFVKKVM 149
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGT 398
E EI KE F +ID + G I ++L++ +G N+ + E+D +++ + SG
Sbjct: 19 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGP 74
Query: 399 MDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
+++ F+ L ED + AF D DG G I L+ G +++
Sbjct: 75 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIK 134
Query: 456 DIIREVDQDNDGRIDY 471
++ D G +DY
Sbjct: 135 NMWAAFPPDVAGNVDY 150
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 350 EMFKMIDTDNSGYITLEELKKG------LQRVGANLMDSEIDGLMQAGDIDNS----GTM 399
E+FK DT+ +G + E+ G L +L D +A D+ N G
Sbjct: 55 ELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEE 114
Query: 400 DYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTAC---QQFGLDDTQLED 456
D EF+ L L I + F DKDGS + E + A +++G+D T
Sbjct: 115 DLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATT 174
Query: 457 IIREVDQDNDGRIDYSEF 474
+ E+D + G + + EF
Sbjct: 175 VFNEIDTNGSGVVTFDEF 192
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +D GL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDAGLA 172
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LK++F++ D G + +L + +G N + ++ G G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMG 57
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 58 EKSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLS 116
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D +++II+ D +D +G + Y +FV
Sbjct: 117 DEDVDEIIKLTDLQEDLEGNVKYEDFV 143
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y
Sbjct: 81 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 140
Query: 403 EFIAAML 409
+F+ ++
Sbjct: 141 DFVKKVM 147
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYT--------ERKAADLTRIIV 239
HPNVI+ + +++ +ELC +++ + + E L R I
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 240 GVVEACHSLGVMHRDLKPENFL 261
V HSL ++HRDLKP+N L
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNIL 165
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI--AKRKLXXXXXXXXXXXXXXXMHHLAGHP---- 189
LGQG FG + +A K I + KL + + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 190 --NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER-KAADLTRIIVGVVEACH 246
N ++ A + + + E C L+D I +R + L R I+ + H
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S G++HR+LKP N +FI+ E +K DFGL+
Sbjct: 134 SQGIIHRNLKPXN-IFID--ESRNVKIGDFGLA 163
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 18/156 (11%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
R L +G F + + + +E+A K + + M L+GHPN++Q
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 194 IVGAYE--------DAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVE 243
A ++ ELC G E ++ RG + + V+
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 244 ACH--SLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
H ++HRDLK EN L NQ +K DFG
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFG 183
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYT--------ERKAADLTRIIV 239
HPNVI+ + +++ +ELC +++ + + E L R I
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 240 GVVEACHSLGVMHRDLKPENFL 261
V HSL ++HRDLKP+N L
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNIL 147
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYT--------ERKAADLTRIIV 239
HPNVI+ + +++ +ELC +++ + + E L R I
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 240 GVVEACHSLGVMHRDLKPENFL 261
V HSL ++HRDLKP+N L
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNIL 147
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHH 184
++ +Y + +G G +G V+ T + A K + R + H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 185 LAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
+ H NVI ++ + +D ++VM G ++++ E + L +
Sbjct: 81 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQM 137
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + H+ G++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGN-LAVN--EDCELKILDFGLA 175
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYT--------ERKAADLTRIIV 239
HPNVI+ + +++ +ELC +++ + + E L R I
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 240 GVVEACHSLGVMHRDLKPENFL 261
V HSL ++HRDLKP+N L
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNIL 165
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
S +I L F +D +G ++ E+ ++ + L D I+ G+ +
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGE----DQV 78
Query: 400 DYGEFIAAMLHLNKIQ----------------REDHMYAAFSYFDKDGSGYITPDELQTA 443
++ F+ + H I+ R + ++ AF +D D I+ DEL
Sbjct: 79 NFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQV 138
Query: 444 CQQF---GLDDTQLEDI----IREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487
+ + D QL I I+E DQD D I ++EFV +++ + +K+
Sbjct: 139 LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKM 189
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 91 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 150 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 179
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL-KKGLQRVGANLMDSE---------IDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K + A L + ++ + ++
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 399 MDYGEFI-----AAMLHLNKIQREDHMY------AAFSYFDKDGSGYITPDELQTACQQF 447
+ + +F+ A L K R + A F FDKDGSG IT DE + +
Sbjct: 83 IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142
Query: 448 GLDDTQ--LEDIIREVDQDNDGRIDYSEFV 475
G+ +Q E R D D+ G +D E
Sbjct: 143 GISPSQEDCEATFRHCDLDDSGDLDVDEMT 172
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 91 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 150 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 179
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +D GL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDRGLA 172
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
S +I L F +D +G ++ E+ ++ + L D I+ G+ +
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGE----DQV 78
Query: 400 DYGEFIAAMLHLNKIQ----------------REDHMYAAFSYFDKDGSGYITPDELQTA 443
++ F+ + H I+ R + ++ AF +D D I+ DEL
Sbjct: 79 NFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQV 138
Query: 444 CQQF---GLDDTQLEDI----IREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487
+ + D QL I I+E DQD D I ++EFV +++ + +K+
Sbjct: 139 LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKM 189
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 8/148 (5%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVI 192
G LG+G FG K T +E + K + + HPNV+
Sbjct: 15 GEVLGKGCFGQAI----KVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVM 251
+ +G ++ + E GG L I Y + + I + HS+ ++
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL N L +E + DFGL+
Sbjct: 131 HRDLNSHNCLV---RENKNVVVADFGLA 155
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 352 FKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+ IDTD GY++L E K LQ VG +L D + D + +G + EF+ +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTV 164
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 90 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 148
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 149 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 178
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 68 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 127 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 156
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L ++VGV + HS G++HRDLKP N L +NQ + +K DFGL+
Sbjct: 162 LYNLLVGV-KYVHSAGILHRDLKPANCL-VNQ--DCSVKVCDFGLA 203
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
SL EEI L+E F+ D D GYI +L ++ +G + E+ L Q +++ G
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 62
Query: 399 MDYGEFIAAM 408
+D+ +F+ M
Sbjct: 63 VDFDDFVELM 72
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE--DIIREVDQDNDGRIDYSEFV 475
+ + AF FDKD GYI +L + G T++E ++ ++++ + G +D+ +FV
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 476 AMM 478
+M
Sbjct: 70 ELM 72
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 188 HPNVIQIVGAYEDAVAVH--VVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVV 242
H N++++ E+ H ++ME C G L+ + + + E + + R +VG +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 243 EACHSLGVMHRDLKPENFL-FINQQEEAPLKTIDFG 277
G++HR++KP N + I + ++ K DFG
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 83 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 141
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 142 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 171
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 17/178 (9%)
Query: 110 SAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXX 169
S+G + G K ++ + Y + +G+G +G +L +K T+K A K + R
Sbjct: 8 SSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDL 66
Query: 170 XXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVA--------VHVVMELCAGGELFDRII 221
++ L I+ Y+ + +++V+E+ A +L
Sbjct: 67 IDCKRILREITILNRLKSD----YIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFK 121
Query: 222 QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
TE + ++ H G++HRDLKP N L ++ +K DFGL+
Sbjct: 122 TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLA 176
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 68 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 127 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 63 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 122 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 151
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
++ ++ KE F++ID D G+I+ +++ +G + E+D ++ + G +
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPI 106
Query: 400 DYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
++ F+ + ED + AF+ FD+ G G + L+ + +G +++
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+ E D +G ID +F ++
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQIL 187
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 65 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 123
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 124 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 153
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXX 178
L + + E Y +G G +G+ + T A K ++ R
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 179 XXXMHHLAGHPNVIQIVGAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ H+ H NVI ++ + A + V++V L G +L + I++ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L I+ ++ HS ++HRDLKP N L +N E+ LK +D GL+
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDGGLA 172
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + I + K D+ R ++ H
Sbjct: 63 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDLK N E+ +K DFGL+
Sbjct: 122 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA 151
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYFDKDG-SGYITPDELQTACQQFGLDDT--QLEDIIRE 460
+ AA+ L Q+ + AAF F +D G I+ EL + G + T +L+++I E
Sbjct: 5 YKAAVEQLTDEQK-NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDE 63
Query: 461 VDQDNDGRIDYSEFVAMM 478
VD+D G +D+ EF+ MM
Sbjct: 64 VDEDGSGTVDFDEFLVMM 81
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L++E+ K F + D G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHLNK 413
D SGT+D+ EF+ M+ K
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMK 86
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII---QRGHYTERKAADLTRIIVGVVEA 244
HPN++ ++ + +V E +++ + G + L +++ GV
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAH- 134
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH ++HRDLKP+N L + LK DFGL+ F
Sbjct: 135 CHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF 169
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII---QRGHYTERKAADLTRIIVGVVEA 244
HPN++ ++ + +V E +++ + G + L +++ GV
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAH- 134
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH ++HRDLKP+N L + LK DFGL+ F
Sbjct: 135 CHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF 169
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 16/161 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX---XXXXXXXXXMHHLAGH 188
G+ LG G FG KE A +A + L M HL H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA-------ADLTRIIVGV 241
N++ ++GA V V+ E C G+L + + ++ K DL V
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 242 VEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ L +HRD+ N L N K DFGL+
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLA 199
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I + G + V +V E G L D +++ G +T + + R I ++
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L IN K DFGLS
Sbjct: 141 SDMGYVHRDLAARNIL-INSN--LVCKVSDFGLS 171
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 16/161 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX---XXXXXXXXXMHHLAGH 188
G+ LG G FG KE A +A + L M HL H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA-------ADLTRIIVGV 241
N++ ++GA V V+ E C G+L + + ++ K DL V
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 242 VEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ L +HRD+ N L N K DFGL+
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLA 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 60/167 (35%), Gaps = 22/167 (13%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX---XXXXXXXXXMHHLAGH 188
G+ LG G FG KE A +A + L M HL H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-----------GHYTERKAA--DLT 235
N++ ++GA V V+ E C G+L + + ++ H E + + DL
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 236 RIIVGVVEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V + L +HRD+ N L N K DFGL+
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLA 213
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
CH V+HRDLKP+N L IN++ E LK DFGL+
Sbjct: 116 CHRQKVLHRDLKPQN-LLINERGE--LKLADFGLA 147
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 346 AGLKEMFK-MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
A L+E +K ++ SG + + E K+ + ++ + +A D + T+D+ E+
Sbjct: 22 AQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEY 81
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDE----------LQTAC-------QQF 447
+AA+ + + E + F +DKD +G I E L+ AC QQ
Sbjct: 82 VAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQG 141
Query: 448 GL--DDTQLEDIIREVDQDNDGRIDYSEFV 475
L + ++ I VD++ DG++ +EFV
Sbjct: 142 KLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 40/135 (29%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
L E F+ +DTD SG I++ EL L G + + L+
Sbjct: 29 LMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLL------------------- 69
Query: 408 MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG 467
HMY DK+ SG IT DE + F L + + R+ D DG
Sbjct: 70 -----------HMY------DKNHSGEITFDEFKD-LHHFIL---SMREGFRKRDSSGDG 108
Query: 468 RIDYSEFVAMMQDSG 482
R+D +E A + SG
Sbjct: 109 RLDSNEVRAALLSSG 123
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 30 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 90 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 196
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 18/162 (11%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ + +LG G FG + + T ++ A K R+ M L HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKL-NHP 72
Query: 190 NVIQIVGAYEDAVAVH---------VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
NV V A E + + ME C GG+L + Q + K + ++
Sbjct: 73 NV---VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 241 VVEAC---HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ A H ++HRDLKPEN + + K ID G +
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 188 HPNVIQIVGAYEDAVAVH--VVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVV 242
H N++++ E+ H ++ME C G L+ + + + E + + R +VG +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 243 EACHSLGVMHRDLKPENFL-FINQQEEAPLKTIDFG 277
G++HR++KP N + I + ++ K DFG
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 27 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 87 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 193
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E ++ DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADFGLA 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 18/162 (11%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
+ + +LG G FG + + T ++ A K R+ M L HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKL-NHP 73
Query: 190 NVIQIVGAYEDAVAVH---------VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
NV V A E + + ME C GG+L + Q + K + ++
Sbjct: 74 NV---VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 241 VVEAC---HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ A H ++HRDLKPEN + + K ID G +
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 25 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 85 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADFGLA 191
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 135 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 165
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 152 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 182
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F ++D D SG+I +EL KG +L E LM AGD D SG ++ EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL--- 454
+ D+ +F M+ L K + D + F DKD SG+I DEL + + F D L
Sbjct: 23 SFDHKKFFQ-MVGLKK-KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80
Query: 455 --EDIIREVDQDNDGRIDYSEFVAMMQDS 481
+ ++ D+D G+I+ EF ++ +S
Sbjct: 81 ETKTLMAAGDKDGSGKIEVEEFSTLVAES 109
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVE 243
HPN++ +GA + +V E + G L+ R++ R ER+ + + +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 244 ACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H+ ++HRDLK N L ++ +K DFGLS
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGLS 186
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 250
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
S E+ A +F + D DN+G+I EE L ++ ++ + D+++ G +
Sbjct: 60 SPEDFAN--HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYIT 117
Query: 401 YGEFIA----------AMLHLNKIQREDHMYAA--FSYFDKDGSGYITPDELQ 441
+ E + +M+ LN+ + M F DK+ GYIT DE +
Sbjct: 118 FDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Query: 387 LMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L D DN+G + + EFI + ++ E+ + AF +D + GYIT DE+ T
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 447 F--------------GLDDTQLEDIIREVDQDNDGRIDYSEF 474
+ +++ I + +D++ DG I EF
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 339 SLSEEEIAG---LKEMFKMIDTDNSGYITLEELKKG 371
+L+E+E +K++FK++D + GYITL+E ++G
Sbjct: 137 TLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREG 172
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGAVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGFVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 135 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 165
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 21/171 (12%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
++ LG+ LG+G FG K +++A + L +
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 184 HLAGHPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGV 241
H+ H NV+ ++GA + + V++E C G L + +R + K DL + + +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 242 -------------VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+E S +HRDL N L E+ +K DFGL+
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLA 195
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPNV+ + G V +V+E G L D +++ G +T + + R I +
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 162 ADMGYVHRDLAARNILV---NSNLVCKVSDFGLS 192
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 341 SEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG- 397
S++EI LK++F++ D G + +L + +G N + ++ G G
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMGE 57
Query: 398 -TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L D
Sbjct: 58 KSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLSD 116
Query: 452 TQLEDIIREVD--QDNDGRIDYSEFV 475
+++II+ D +D +G + Y +FV
Sbjct: 117 EDVDEIIKLTDLQEDLEGNVKYEDFV 142
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y
Sbjct: 80 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 139
Query: 403 EFIAAML 409
+F+ ++
Sbjct: 140 DFVKKVM 146
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 162 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 192
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
I+ ++A H ++H DLKPEN L + QQ + +K IDFG S +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSCY 251
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
I+ ++A H ++H DLKPEN L + QQ + +K IDFG S +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSCY 251
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
I+ ++A H ++H DLKPEN L + QQ + +K IDFG S +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSCY 251
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGLS
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS 194
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 341 SEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG- 397
S++EI LK++F++ D G + +L + +G N + ++ G G
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMGE 57
Query: 398 -TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L D
Sbjct: 58 KSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLSD 116
Query: 452 TQLEDIIREVD--QDNDGRIDYSEFV 475
+++II+ D +D +G + Y +FV
Sbjct: 117 EDVDEIIKLTDLQEDLEGNVKYEDFV 142
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y
Sbjct: 80 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 139
Query: 403 EFIAAML 409
+F+ ++
Sbjct: 140 DFVKKVM 146
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACH 246
HPNVI + G + V ++ E G L + Q G +T + + R I ++
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ +HR L N L K DFGLS F
Sbjct: 127 DMNYVHRALAARNILV---NSNLVCKVSDFGLSRFL 159
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYF---DKDGSGYITPDELQTACQQFGLDDT--QLEDII 458
+ AA+ L + Q+ + AAF F +DGS I+ EL + G + T +L+++I
Sbjct: 5 YKAAVEQLTEEQK-NEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 459 REVDQDNDGRIDYSEFVAMM 478
EVD+D G +D+ EF+ MM
Sbjct: 62 DEVDEDGSGTVDFDEFLVMM 81
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLH 410
D SGT+D+ EF+ M+
Sbjct: 66 EDGSGTVDFDEFLVMMVR 83
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED-----IIREVDQDNDGRI 469
+ D + AF+ +D SG+I DEL+ Q F D L D ++ D D DG+I
Sbjct: 38 KSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKI 97
Query: 470 DYSEFVAMMQ 479
E+ A+++
Sbjct: 98 GVDEWTALVK 107
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
L+ + +K+ F +I D SG+I +ELK LQ A+ L D E ++AGD D
Sbjct: 35 LTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 397 GTMDYGEFIA 406
G + E+ A
Sbjct: 95 GKIGVDEWTA 104
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 23/150 (15%)
Query: 349 KEMFKMIDTDNSGYITLEEL-KKGLQRVGANLMDSE---------IDGLMQAGDIDNSGT 398
K MF +D + +G ITL+E+ K + NL + ++ + ++
Sbjct: 23 KFMFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCGLEYGKE 82
Query: 399 MDYGEFIA-----AMLHLNKIQREDHMY------AAFSYFDKDGSGYITPDELQTACQQF 447
+ EF+ A L K R + A F FDKDGSG IT DE + +
Sbjct: 83 TKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRIS 142
Query: 448 GLDDTQ--LEDIIREVDQDNDGRIDYSEFV 475
G+ ++ E + D DN G +D E
Sbjct: 143 GISPSEEDCEKTFQHCDLDNSGELDVDEMT 172
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409
+F + D D SG ITL+E K + G + + + + Q D+DNSG +D E L
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHL 176
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 203 AVHVVMELCAGGELFDRI-IQRGHYTERKAA-DLTRIIVGVVEACHSLGVMHRDLKPENF 260
+ + ME C G L I +RG ++ A +L I V+ HS ++HRDLKP N
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 261 LFINQQEEAPLKTIDFGL 278
++ ++ +K DFGL
Sbjct: 168 FLVDTKQ---VKIGDFGL 182
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHLNK 413
D SGT+D+ EF+ M+ K
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMK 86
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYFDKDGS-GYITPDELQTACQQFGLDDT--QLEDIIRE 460
+ AA+ L + Q+ + AAF F + G I+ EL + G + T +L+++I E
Sbjct: 5 YKAAVEQLTEEQK-NEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDE 63
Query: 461 VDQDNDGRIDYSEFVAMM 478
VD+D G +D+ EF+ MM
Sbjct: 64 VDEDGSGTVDFDEFLVMM 81
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F ++D D SG+I +EL KG A+L E LM AGD D G + EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL--- 454
+ D+ +F M+ L K + D + F DKD SG+I DEL + + F D L
Sbjct: 23 SFDHKKFFQ-MVGLKK-KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAK 80
Query: 455 --EDIIREVDQDNDGRIDYSEFVAMMQDS 481
+ ++ D+D DG+I EF ++ +S
Sbjct: 81 ETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H P ++ GA+ + + ME GG L D++++ + L ++ + V+
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEI--LGKVSIAVLR 125
Query: 244 ACHSL----GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +MHRD+KP N L +N + E +K DFG+S
Sbjct: 126 GLAYLREKHQIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 162
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYF---DKDGSGYITPDELQTACQQFGLDDT--QLEDII 458
+ AA+ L + Q+ + AAF F +DGS I+ EL + G + T +L+++I
Sbjct: 5 YKAAVEQLTEEQK-NEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 459 REVDQDNDGRIDYSEFVAMM 478
EVD+D G +D+ EF+ MM
Sbjct: 62 DEVDEDGSGTVDFDEFLVMM 81
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLH 410
D SGT+D+ EF+ M+
Sbjct: 66 EDGSGTVDFDEFLVMMVR 83
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
+F DTD++G ++ E+ KGL + + +++ DI+ G + E + M
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166
Query: 411 L--------NKIQRED----HMYAAFSYFDKDGSGYITPDELQTACQQ 446
+ + +ED H+ F DK+ G +T DE +CQ+
Sbjct: 167 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 387 LMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDE------- 439
L A D D++G + + +FI + L + ++ + AF+ +D + GYIT +E
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166
Query: 440 ---LQTACQQFGLDD----TQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ C L + +E +++D++ DG + EF+ Q
Sbjct: 167 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ 213
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYF---DKDGSGYITPDELQTACQQFGLDDT--QLEDII 458
+ AA+ L + Q+ + AAF F +DGS I+ EL + G + T +L+++I
Sbjct: 5 YKAAVEQLTEEQK-NEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 459 REVDQDNDGRIDYSEFVAMM 478
EVD+D G +D+ EF+ MM
Sbjct: 62 DEVDEDGSGTVDFDEFLVMM 81
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLH 410
D SGT+D+ EF+ M+
Sbjct: 66 EDGSGTVDFDEFLVMMVR 83
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++ + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHL 185
L ++ + K+G+G F + +L A + + IA + L +
Sbjct: 19 LSNVFKIEDKIGEGTFSSVYLAT--AQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
G NV+ + + V + M D I+ + E + L + ++
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLD-ILNSLSFQEVREYMLN--LFKALKRI 133
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H G++HRD+KP NFL+ + ++ L +DFGL+
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLA 165
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHP 189
Y + RKLG G F T +LC + ++ A K + + P
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 190 N---VIQIVGAYEDA--VAVHVVMELCAGGELFDRIIQRGHY---TERKAADLTRIIVGV 241
N V+Q++ ++ + +HV M G + I + +Y R + R ++
Sbjct: 93 NKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQG 152
Query: 242 VEACHS-LGVMHRDLKPENFLF 262
++ HS ++H D+KPEN L
Sbjct: 153 LDYLHSKCKIIHTDIKPENILM 174
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLS 279
++ +E HS +++RD+KPENFL Q ++E + IDFGL+
Sbjct: 106 LLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQ 193
RK+G G FG LC +K +A K + K + + N+++
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK 100
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM-- 251
G + + ++ E G L++ II R +Y D+ + +++A + L M
Sbjct: 101 YHGKFMYYDHMCLIFE-PLGPSLYE-IITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL 158
Query: 252 -HRDLKPENFLFINQQEEAPLKTI 274
H DLKPEN L + E L T+
Sbjct: 159 THTDLKPENILLDDPYFEKSLITV 182
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L K DFGL+
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLA 194
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 188 HPNVIQI-----VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
H N+I I E V++V L G +L+ ++++ H + I+ +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLYQILRGL 157
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
+ HS V+HRDLKP N L + LK DFGL+ P
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADP 196
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 340 LSEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LK++F++ G + +L + +G N + ++ G G
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMG 59
Query: 398 --TMDYGEFIAAMLHLNKIQR---EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
++ + EF+ A L ++ D+M AF FD++G G+I+ EL+ G L
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 451 DTQLEDIIREVD--QDNDGRIDYSEFV 475
D +++II+ D +D +G + Y +FV
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYG 402
A E FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 142
Query: 403 EFIAAML 409
+F+ ++
Sbjct: 143 DFVKKVM 149
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM-- 408
+F D D +G I E+ GL + + ++ DI+ G + E +A M
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 409 ------LHLNKIQRED----HMYAAFSYFDKDGSGYITPDELQTACQQ 446
H I RED H+ F D++ G +T DE CQ+
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 387 LMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L A D D +G + + +F+ + L + + + AF+ +D + G IT +E+ +
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 447 FG-----------LDDTQLEDIIR---EVDQDNDGRIDYSEFVAMMQ 479
+D LE + R ++D++ DG + EF+ Q
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC 245
HPN+I++ G + V +V E G L D +++ +T + + R I ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+G +HRDL N L K DFGL
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGL 193
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVE 243
HPN++ +GA + +V E + G L+ R++ R ER+ + + +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 244 ACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H+ ++HR+LK N L ++ +K DFGLS
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLS 186
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLA 186
+LG+ LG+G FG + ++K KE ++ K M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 187 G-HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
G H N+I ++GA ++V++ + G L + + R + D+ R+
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA 204
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
+FK ID + G ++ EE+K + + A + + + ++ D D +G +D EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK---F 61
Query: 411 LNKIQRED------HMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQD 464
IQ +D + + D DG G +T +E+ + ++ G++ ++ + + + D +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE--KVAEQVMKADAN 119
Query: 465 NDGRIDYSEFV 475
DG I EF+
Sbjct: 120 GDGYITLEEFL 130
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 298 FFQKQR----QSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFK 353
F K+R + +LQ + ++++ G+ D+ + + LS+++I GLK ++K
Sbjct: 25 FVSKKRAIKNEQLLQL-IFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI-GLKVLYK 82
Query: 354 MIDTDNSGYITLEEL-----KKGLQRVGANLMDSEIDG 386
++D D G +T EE+ K G+++V +M ++ +G
Sbjct: 83 LMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANG 120
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 385 DGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDEL---- 440
+ L + D++ G + Y E A + I+ E + F D DG+G I +E
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 441 -QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGK 485
Q D L+ + + +D D DG++ E + + G+ K
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK 108
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQI 194
KLG G + T + + K T A K + KL + H N++++
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR-------------IIVGV 241
+H +L E D +++ + R + R ++ G+
Sbjct: 69 YDV------IHTENKLTLVFEFMDNDLKK-YMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH ++HRDLKP+N L IN++ + LK DFGL+ F
Sbjct: 122 A-FCHENKILHRDLKPQN-LLINKRGQ--LKLGDFGLARAF 158
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F ++D D SG+I EEL+ L+ ++ L +E + AGD D G + EF
Sbjct: 43 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 102
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 384 IDGLMQAGDIDNS-------GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
I ++ A DI+++ + +Y F + + +K D + F D+D SG+I
Sbjct: 2 ITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTP--DQIKKVFGILDQDKSGFIE 59
Query: 437 PDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ELQ + F L + + + D D DG+I EF ++++
Sbjct: 60 EEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
+FK ID + G ++ EE+K + + A + + + ++ D D +G +D EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK---F 61
Query: 411 LNKIQRED------HMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQD 464
IQ +D + + D DG G +T +E+ + ++ G++ ++ + + + D +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE--KVAEQVMKADAN 119
Query: 465 NDGRIDYSEFV 475
DG I EF+
Sbjct: 120 GDGYITLEEFL 130
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 298 FFQKQR----QSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFK 353
F K+R + +LQ + ++++ G+ D+ + + LS+++I GLK ++K
Sbjct: 25 FVSKKRAIKNEQLLQL-IFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI-GLKVLYK 82
Query: 354 MIDTDNSGYITLEEL-----KKGLQRVGANLMDSEIDG 386
++D D G +T EE+ K G+++V +M ++ +G
Sbjct: 83 LMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANG 120
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 385 DGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDEL---- 440
+ L + D++ G + Y E A + I+ E + F D DG+G I +E
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 441 -QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGK 485
Q D L+ + + +D D DG++ E + + G+ K
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK 108
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL--- 454
+ D+ +F M+ L K + D + F DKD SG+I DEL + + F D L
Sbjct: 23 SFDHKKFFQ-MVGLKK-KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80
Query: 455 --EDIIREVDQDNDGRIDYSEFVAMMQDS 481
+ ++ D+D DG+I EF ++ +S
Sbjct: 81 ETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F ++D D SG+I +EL KG +L E LM AGD D G + EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACH 246
H N++ +G Y + +V + C G L+ + +Q + + D+ R ++ H
Sbjct: 91 HVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRD+K N E +K DFGL+
Sbjct: 150 AKNIIHRDMKSNNIFL---HEGLTVKIGDFGLA 179
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F ++D D SG+I EEL+ L+ ++ L +E + AGD D G + EF
Sbjct: 44 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 103
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYS 472
D + F D+D SG+I +ELQ + F L + + + D D DG+I
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Query: 473 EFVAMMQ 479
EF ++++
Sbjct: 102 EFQSLVK 108
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 7 IEDLMKDSDKNNDGRIDFDEFLKMME 32
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMH--- 183
+E LG+ LG+G FG +K C+++A + L +
Sbjct: 26 RERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILT 85
Query: 184 HLAGHPNVIQIVGA-YEDAVAVHVVMELCAGGEL 216
H+ H NV+ ++GA + + V++E C G L
Sbjct: 86 HIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNL 119
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HSLG+ HRD+KP+N L +N ++ LK DFG
Sbjct: 158 HSLGICHRDIKPQN-LLVNSKDNT-LKLCDFG 187
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXX---XXXXXXXXXMHHLAGH 188
G+ LG G FG KE A +A + L M HL H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFD 218
N++ ++GA V V+ E C G+L +
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLN 124
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDEL 440
D D +G +D+ EFI A+ ++ + D + AF +D D +G I+ DE+
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEM 121
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGE------- 403
+F + D D +GYI +E L ++ ++ Q D+DN+G + Y E
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Query: 404 ---FIAAMLHL--NKIQREDHMYAAFSYFDKDGSGYITPDEL 440
+ +M+ L ++ E + F+ DK+ G +T +E
Sbjct: 128 IYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 336 IAESLSEEEIAGLK----EMFKMIDTDNSGYITLEELKKG-LQRVGANLMDSEIDGLMQ- 389
I +++ E+ A K E+FK D + +G + +E+ G L+ + + S + + +
Sbjct: 34 IRQAIPREKTAEAKQRRIELFKKFDKNETGKLXYDEVYSGCLEVLKLDEFTSRVRDITKR 93
Query: 390 --------AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
++N G+ D+ EF+ L L I + F D G+ + +E +
Sbjct: 94 AFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFK 153
Query: 442 TACQQFGLDDTQLED---IIREVDQDNDGRIDYSEFVA 476
A + ++ED + +E+D++ G + + EF A
Sbjct: 154 RAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL-----EDIIREVDQDNDGR 468
++ D + F DKD SG+I DEL + + F D L + ++ D+D DG+
Sbjct: 1 MKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGK 60
Query: 469 IDYSEFVAMMQDS 481
I EF ++ +S
Sbjct: 61 IGVEEFSTLVAES 73
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 348 LKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+K++F ++D D SG+I +EL KG +L E LM AGD D G + EF
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTE-RKAADLTRIIVGVVEACH 246
H NV+ +GA + ++ LC G L+ + + K + + IV + H
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+ G++H+DLK +N + N + + DFGL
Sbjct: 148 AKGILHKDLKSKNVFYDNGK----VVITDFGL 175
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED-----IIREVDQDNDGRI 469
+ D + AF+ +D SG+I DEL+ Q F D L D ++ D D DG+I
Sbjct: 38 KSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKI 97
Query: 470 DYSEFVAMMQ 479
++ A+++
Sbjct: 98 GVDDWTALVK 107
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
L+ + +K+ F +I D SG+I +ELK LQ A+ L D E ++AGD D
Sbjct: 35 LTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 397 GTMDYGEFIA 406
G + ++ A
Sbjct: 95 GKIGVDDWTA 104
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 144 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 173
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXXXXXXMHHLAG 187
+ Y ++G+G +G F + F + + + HL
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 188 --HPNVIQIVGAYEDA----------VAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
HPNV+++ + V HV +L D++ + G TE +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPGVPTETIKDMMF 127
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+++ G+ + HS V+HRDLKP+N L + + +K DFGL+ +
Sbjct: 128 QLLRGL-DFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIY 170
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 167 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 196
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHLNK 413
D SGT+D+ EF+ M+ K
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMK 86
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYFDKDGS-GYITPDELQTACQQFGLDDT--QLEDIIRE 460
+ AA+ L + Q+ + AAF F G I+ EL + G + T +L+++I E
Sbjct: 5 YKAAVEQLTEEQK-NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDE 63
Query: 461 VDQDNDGRIDYSEFVAMM 478
VD+D G +D+ EF+ MM
Sbjct: 64 VDEDGSGTVDFDEFLVMM 81
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 177 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 173 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 202
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 175 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 204
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 173 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 202
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 218 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 247
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ ++ ++ + + F +D D SG + + EL G G L +M+ D D
Sbjct: 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDF 100
Query: 396 SGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE 455
+G + + EF+A + + Y F + SG + P E+ A QQ G Q
Sbjct: 101 NGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRT 154
Query: 456 DII 458
++
Sbjct: 155 SLL 157
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 151 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 180
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 147 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 176
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 158 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 187
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 189 PNVIQIVGAYEDAVAVHVVMEL--CAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEAC 245
P + GA V + MEL + + + ++I +G E + IV +E
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 246 HS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
HS L V+HRD+KP N L IN + +K DFG+S +
Sbjct: 170 HSKLSVIHRDVKPSNVL-INALGQ--VKMCDFGISGYL 204
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 151 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 180
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN+I + G + +VME GG L +R++ + I + H
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 248 ---LGVMHRDLKPENFLFINQQEEAP-----LKTIDFGLS 279
+ ++HRDLK N L + + E LK DFGL+
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 152 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 181
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 35.4 bits (80), Expect = 0.065, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
F+ DK SG++T + +T Q L QL I D D DG++ EF+ M
Sbjct: 20 FNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 352 FKMIDTDNSGYITLEELKKGL----QRVGANLMDSEI----DGLMQAGDIDNSGTMDYGE 403
++ DTD+SG+I EELK L ++ + D+++ D +++ D +N G ++ E
Sbjct: 109 WRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTE 168
Query: 404 ----------FIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDEL 440
F+ + +E AF +D+DG+GYI +EL
Sbjct: 169 MARLLPVQENFLLKFQGIKMCGKE--FNKAFELYDQDGNGYIDENEL 213
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 69/154 (44%), Gaps = 25/154 (16%)
Query: 350 EMFKMIDTDNSGYIT-------LEELKKGLQRVGANL---MDSEIDGLMQAGD-----ID 394
E++ D D SGY+ ++EL + ++ G L M + +D Q D ++
Sbjct: 20 EIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVE 79
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF------G 448
+ + E + +++ + + +D D SG+I +EL+ +
Sbjct: 80 LAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKT 139
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMM 478
+DDT+L + +++ D +NDG+++ +E ++
Sbjct: 140 VDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 419 HMYAAFSYFDKDGSGYITPDELQTACQQF-------GLD-DTQLEDIIREVDQDNDGRID 470
+ + +FD DGSGY+ ELQ Q+ GL+ +++ + + Q +DG+I
Sbjct: 17 QFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIG 76
Query: 471 YSEFVAMM 478
E ++
Sbjct: 77 IVELAHVL 84
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 140 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 169
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 143 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 172
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
HS G+ HRD+KP+N L + A LK DFG
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,413,725
Number of Sequences: 62578
Number of extensions: 474034
Number of successful extensions: 4080
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 380
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 1604
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)