Query 040003
Match_columns 489
No_of_seqs 712 out of 5585
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 04:09:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040003.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040003hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0615 Serine/threonine prote 100.0 3.3E-41 7.1E-46 318.0 19.6 226 125-369 169-435 (475)
2 KOG0575 Polo-like serine/threo 100.0 2.5E-40 5.5E-45 327.0 18.5 236 128-370 18-268 (592)
3 KOG0595 Serine/threonine-prote 100.0 4.3E-40 9.4E-45 310.8 18.0 161 126-288 8-171 (429)
4 KOG0592 3-phosphoinositide-dep 100.0 5.2E-38 1.1E-42 305.8 22.7 154 128-284 73-226 (604)
5 KOG0593 Predicted protein kina 100.0 8.9E-39 1.9E-43 290.3 13.9 187 128-320 2-205 (396)
6 KOG0611 Predicted serine/threo 100.0 1.1E-38 2.4E-43 299.5 12.8 193 124-321 49-257 (668)
7 KOG0598 Ribosomal protein S6 k 100.0 7.1E-38 1.5E-42 293.3 16.8 188 128-321 25-229 (357)
8 KOG0600 Cdc2-related protein k 100.0 2.7E-37 5.8E-42 298.5 19.9 188 127-320 116-323 (560)
9 KOG0033 Ca2+/calmodulin-depend 100.0 4.6E-39 1E-43 283.9 6.1 224 125-368 8-264 (355)
10 KOG0659 Cdk activating kinase 100.0 3.9E-37 8.5E-42 275.1 18.4 233 128-369 2-279 (318)
11 KOG0616 cAMP-dependent protein 100.0 3.4E-37 7.3E-42 279.5 16.4 189 128-321 44-264 (355)
12 KOG0581 Mitogen-activated prot 100.0 5.5E-36 1.2E-40 280.7 24.8 233 129-370 80-334 (364)
13 KOG0032 Ca2+/calmodulin-depend 100.0 6.1E-36 1.3E-40 296.1 23.9 229 123-370 30-292 (382)
14 KOG0661 MAPK related serine/th 100.0 3.5E-37 7.6E-42 295.6 10.7 236 126-370 8-290 (538)
15 KOG0588 Serine/threonine prote 100.0 2.9E-36 6.2E-41 299.4 17.4 236 128-370 12-262 (786)
16 KOG0583 Serine/threonine prote 100.0 1.8E-35 3.8E-40 293.0 20.5 237 127-369 16-273 (370)
17 KOG0663 Protein kinase PITSLRE 100.0 1.1E-35 2.4E-40 273.6 15.1 187 128-320 76-281 (419)
18 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-34 2.5E-39 278.0 21.2 219 128-371 97-372 (576)
19 KOG0694 Serine/threonine prote 100.0 4.1E-34 8.9E-39 286.2 24.2 152 128-283 368-519 (694)
20 KOG0591 NIMA (never in mitosis 100.0 1.3E-36 2.7E-41 273.7 4.5 158 128-290 19-186 (375)
21 KOG0605 NDR and related serine 100.0 7.2E-35 1.6E-39 284.1 16.4 152 127-282 140-291 (550)
22 KOG0599 Phosphorylase kinase g 100.0 2.3E-35 5E-40 264.3 11.6 221 127-368 16-280 (411)
23 KOG0604 MAP kinase-activated p 100.0 2E-34 4.4E-39 261.5 15.7 221 124-370 57-321 (400)
24 KOG0580 Serine/threonine prote 100.0 1.2E-34 2.5E-39 255.7 11.2 159 128-290 22-182 (281)
25 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-33 3.4E-38 264.0 19.2 203 128-358 11-240 (323)
26 KOG0597 Serine-threonine prote 100.0 7E-34 1.5E-38 277.3 15.1 231 128-369 2-249 (808)
27 KOG0660 Mitogen-activated prot 100.0 2.4E-33 5.2E-38 262.0 17.7 192 125-322 19-233 (359)
28 KOG0578 p21-activated serine/t 100.0 3.9E-32 8.4E-37 267.0 20.6 186 123-322 268-453 (550)
29 KOG4717 Serine/threonine prote 100.0 1E-31 2.3E-36 259.3 22.0 280 123-409 13-337 (864)
30 KOG0658 Glycogen synthase kina 100.0 3.6E-32 7.8E-37 254.5 16.5 182 129-321 25-230 (364)
31 KOG0607 MAP kinase-interacting 100.0 6.2E-33 1.3E-37 253.8 11.1 157 123-282 72-229 (463)
32 KOG0198 MEKK and related serin 100.0 2.2E-32 4.8E-37 260.6 15.4 232 129-370 18-275 (313)
33 KOG0582 Ste20-like serine/thre 100.0 2E-31 4.4E-36 254.2 21.6 233 128-370 26-292 (516)
34 PTZ00263 protein kinase A cata 100.0 1.7E-31 3.6E-36 264.3 21.7 187 128-319 18-217 (329)
35 cd05626 STKc_LATS2 Catalytic d 100.0 2E-31 4.4E-36 269.1 22.1 150 129-282 2-151 (381)
36 PLN00034 mitogen-activated pro 100.0 8.9E-31 1.9E-35 261.8 25.9 181 128-318 74-274 (353)
37 KOG0667 Dual-specificity tyros 100.0 1.3E-31 2.9E-36 268.0 18.7 188 129-322 187-393 (586)
38 cd05571 STKc_PKB Catalytic dom 100.0 4.2E-31 9.2E-36 260.8 22.1 145 134-282 1-145 (323)
39 KOG0586 Serine/threonine prote 100.0 3.6E-31 7.9E-36 262.4 21.4 234 128-369 56-304 (596)
40 cd05629 STKc_NDR_like_fungal C 100.0 4.4E-31 9.6E-36 266.3 22.3 150 129-282 2-151 (377)
41 KOG0192 Tyrosine kinase specif 100.0 3.7E-31 8.1E-36 259.8 21.0 236 130-375 43-303 (362)
42 cd05628 STKc_NDR1 Catalytic do 100.0 3.1E-31 6.8E-36 266.0 20.8 151 129-283 2-152 (363)
43 cd05612 STKc_PRKX_like Catalyt 100.0 2.4E-31 5.3E-36 258.6 18.8 186 129-319 2-200 (291)
44 cd05598 STKc_LATS Catalytic do 100.0 6.7E-31 1.4E-35 265.0 22.3 150 129-282 2-151 (376)
45 KOG0610 Putative serine/threon 100.0 2.7E-31 5.8E-36 251.5 17.9 151 128-282 77-229 (459)
46 PTZ00426 cAMP-dependent protei 100.0 9.6E-31 2.1E-35 259.7 21.6 187 128-319 30-230 (340)
47 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-30 4E-35 257.4 23.1 187 129-320 2-201 (333)
48 KOG4236 Serine/threonine prote 100.0 7.1E-31 1.5E-35 254.2 18.4 194 127-325 561-791 (888)
49 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-30 2.4E-35 258.3 19.7 182 134-319 1-197 (328)
50 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-30 4.2E-35 262.2 21.5 150 129-282 2-151 (382)
51 cd05585 STKc_YPK1_like Catalyt 100.0 1.8E-30 4E-35 255.0 20.0 181 136-320 1-196 (312)
52 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-30 2.6E-35 262.0 18.9 151 129-283 2-152 (364)
53 cd05621 STKc_ROCK2 Catalytic d 100.0 4.9E-30 1.1E-34 257.6 22.7 188 128-320 43-250 (370)
54 cd05591 STKc_nPKC_epsilon Cata 100.0 3.8E-30 8.2E-35 253.8 21.5 146 134-282 1-146 (321)
55 cd05595 STKc_PKB_beta Catalyti 100.0 1.3E-30 2.8E-35 257.3 17.9 182 134-319 1-197 (323)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 7.2E-30 1.6E-34 252.3 22.9 145 134-282 1-146 (325)
57 cd05631 STKc_GRK4 Catalytic do 100.0 5.8E-30 1.3E-34 248.2 21.7 187 130-320 2-204 (285)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5E-30 1.1E-34 249.0 20.6 185 128-319 5-206 (288)
59 cd05596 STKc_ROCK Catalytic do 100.0 6.7E-30 1.5E-34 256.8 22.2 188 128-320 43-250 (370)
60 cd05587 STKc_cPKC Catalytic do 100.0 3.6E-30 7.7E-35 254.3 19.7 187 130-319 2-203 (324)
61 KOG0193 Serine/threonine prote 100.0 1.9E-29 4.2E-34 248.9 23.9 235 129-375 393-653 (678)
62 KOG0589 Serine/threonine prote 100.0 8E-31 1.7E-35 256.2 13.8 235 128-370 4-257 (426)
63 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.2E-30 1.3E-34 254.2 20.4 240 128-375 7-334 (338)
64 cd05616 STKc_cPKC_beta Catalyt 100.0 9.9E-30 2.1E-34 251.1 21.7 187 130-319 2-203 (323)
65 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-29 2.6E-34 254.9 22.6 187 128-319 43-249 (371)
66 cd05597 STKc_DMPK_like Catalyt 100.0 1E-29 2.2E-34 251.8 21.7 153 129-285 2-155 (331)
67 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-29 3.7E-34 253.2 23.2 151 129-283 2-152 (360)
68 cd05590 STKc_nPKC_eta Catalyti 100.0 8E-30 1.7E-34 251.3 19.9 183 134-319 1-198 (320)
69 cd05592 STKc_nPKC_theta_delta 100.0 4.5E-30 9.8E-35 252.6 18.1 183 134-319 1-198 (316)
70 cd05624 STKc_MRCK_beta Catalyt 100.0 2.5E-29 5.4E-34 249.0 23.5 153 129-285 2-155 (331)
71 cd05601 STKc_CRIK Catalytic do 100.0 2.3E-29 5E-34 249.2 22.5 153 129-285 2-155 (330)
72 KOG0662 Cyclin-dependent kinas 100.0 4.8E-30 1E-34 216.9 14.9 185 129-319 3-205 (292)
73 cd05588 STKc_aPKC Catalytic do 100.0 1.6E-29 3.5E-34 250.2 21.0 182 134-318 1-197 (329)
74 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-29 2.7E-34 250.5 20.2 186 130-320 1-204 (324)
75 cd05620 STKc_nPKC_delta Cataly 100.0 5.2E-30 1.1E-34 252.2 17.4 184 134-320 1-199 (316)
76 KOG0201 Serine/threonine prote 100.0 5.6E-31 1.2E-35 251.1 10.0 227 128-369 13-261 (467)
77 KOG0690 Serine/threonine prote 100.0 3.9E-31 8.5E-36 242.5 8.2 151 127-281 167-317 (516)
78 cd05573 STKc_ROCK_NDR_like Cat 100.0 6E-30 1.3E-34 255.5 17.6 153 129-285 2-154 (350)
79 cd05586 STKc_Sck1_like Catalyt 100.0 2.5E-29 5.5E-34 248.9 21.6 144 136-282 1-146 (330)
80 KOG0197 Tyrosine kinases [Sign 100.0 8.9E-30 1.9E-34 249.7 17.9 231 129-375 207-461 (468)
81 KOG0608 Warts/lats-like serine 100.0 5E-30 1.1E-34 253.1 15.6 218 129-352 630-910 (1034)
82 cd05623 STKc_MRCK_alpha Cataly 100.0 2.9E-29 6.3E-34 248.7 21.4 187 129-319 2-210 (332)
83 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-29 5.9E-34 248.9 21.1 186 130-318 2-208 (332)
84 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-29 3.2E-34 249.7 19.1 187 130-319 2-203 (323)
85 KOG0194 Protein tyrosine kinas 100.0 4.1E-29 9E-34 248.8 21.9 224 128-375 157-420 (474)
86 KOG1989 ARK protein kinase fam 100.0 1.9E-29 4.1E-34 260.4 19.8 234 129-375 38-311 (738)
87 cd05618 STKc_aPKC_iota Catalyt 100.0 4.3E-29 9.3E-34 247.1 21.7 182 134-318 1-197 (329)
88 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-29 2.5E-34 250.0 17.6 184 134-320 1-199 (318)
89 cd05619 STKc_nPKC_theta Cataly 100.0 1.5E-29 3.3E-34 248.8 18.2 183 134-319 1-198 (316)
90 cd05106 PTKc_CSF-1R Catalytic 100.0 3.4E-29 7.5E-34 251.9 20.9 241 127-375 37-372 (374)
91 KOG1187 Serine/threonine prote 100.0 7.5E-29 1.6E-33 245.2 22.2 182 129-318 76-279 (361)
92 cd05584 STKc_p70S6K Catalytic 100.0 2.3E-29 4.9E-34 248.5 18.5 183 134-320 2-203 (323)
93 KOG0612 Rho-associated, coiled 100.0 1.2E-30 2.5E-35 272.9 9.6 152 128-283 75-226 (1317)
94 KOG4250 TANK binding protein k 100.0 3.8E-30 8.3E-35 258.5 12.9 188 129-319 14-226 (732)
95 cd05582 STKc_RSK_N N-terminal 100.0 9E-29 1.9E-33 243.7 22.2 147 134-285 2-151 (318)
96 KOG0577 Serine/threonine prote 100.0 1.1E-30 2.4E-35 255.9 8.4 188 125-324 23-211 (948)
97 cd05104 PTKc_Kit Catalytic dom 100.0 5.6E-29 1.2E-33 250.5 19.9 239 128-374 35-373 (375)
98 cd07848 STKc_CDKL5 Catalytic d 100.0 1.3E-28 2.8E-33 238.8 21.6 187 129-320 2-204 (287)
99 KOG1094 Discoidin domain recep 100.0 2.5E-28 5.3E-33 239.5 22.8 186 128-324 538-725 (807)
100 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-28 3E-33 238.5 20.4 186 130-319 2-203 (285)
101 PTZ00267 NIMA-related protein 100.0 5.2E-28 1.1E-32 250.9 25.7 231 128-369 67-321 (478)
102 cd06650 PKc_MEK1 Catalytic dom 100.0 2.6E-28 5.7E-33 241.8 22.0 186 128-319 5-204 (333)
103 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-28 3.3E-33 242.8 20.3 145 134-282 1-146 (325)
104 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-28 2.9E-33 243.0 19.8 145 134-282 1-146 (323)
105 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-28 2.8E-33 243.5 19.7 182 134-318 1-197 (327)
106 cd06649 PKc_MEK2 Catalytic dom 100.0 4.8E-28 1E-32 239.9 23.7 186 128-319 5-204 (331)
107 cd05608 STKc_GRK1 Catalytic do 100.0 2.4E-28 5.1E-33 236.2 20.8 180 136-319 1-199 (280)
108 cd05603 STKc_SGK2 Catalytic do 100.0 1.5E-28 3.2E-33 242.5 19.6 182 134-319 1-198 (321)
109 cd05096 PTKc_DDR1 Catalytic do 100.0 4.7E-28 1E-32 237.0 23.0 153 128-286 5-192 (304)
110 KOG0579 Ste20-like serine/thre 100.0 1.4E-30 3E-35 256.8 4.9 193 124-324 28-221 (1187)
111 KOG0574 STE20-like serine/thre 100.0 1.2E-30 2.6E-35 236.9 4.0 166 127-302 32-198 (502)
112 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-28 3.6E-33 242.5 19.4 182 134-319 1-198 (325)
113 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.6E-28 7.8E-33 245.8 21.4 241 127-375 36-397 (400)
114 PTZ00284 protein kinase; Provi 100.0 1.6E-27 3.5E-32 247.0 26.4 187 127-319 128-347 (467)
115 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.3E-28 7.1E-33 238.7 19.8 186 128-320 6-208 (309)
116 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.9E-28 1.1E-32 240.4 21.2 186 129-320 1-211 (338)
117 cd08228 STKc_Nek6 Catalytic do 100.0 5.2E-28 1.1E-32 231.9 20.6 241 129-376 3-266 (267)
118 KOG0983 Mitogen-activated prot 100.0 5.3E-28 1.1E-32 217.3 18.3 149 130-284 94-244 (391)
119 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.5E-27 3.3E-32 228.7 22.8 239 128-375 5-265 (266)
120 cd05580 STKc_PKA Catalytic dom 100.0 5.4E-28 1.2E-32 234.9 19.6 186 129-319 2-200 (290)
121 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.1E-28 6.8E-33 238.1 17.3 185 128-319 5-206 (303)
122 cd05607 STKc_GRK7 Catalytic do 100.0 1.2E-27 2.6E-32 230.9 20.8 180 136-319 1-196 (277)
123 cd05609 STKc_MAST Catalytic do 100.0 1.8E-27 3.9E-32 233.0 22.2 149 129-281 2-150 (305)
124 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-27 6.3E-32 226.5 23.1 241 128-375 2-265 (267)
125 PRK13184 pknD serine/threonine 100.0 2.4E-27 5.2E-32 253.8 24.8 151 128-282 2-163 (932)
126 cd05630 STKc_GRK6 Catalytic do 100.0 2E-27 4.4E-32 230.3 22.1 186 130-319 2-203 (285)
127 PTZ00283 serine/threonine prot 100.0 2.3E-27 4.9E-32 246.4 23.5 235 128-370 32-296 (496)
128 PHA02988 hypothetical protein; 100.0 4.7E-27 1E-31 227.5 23.7 233 134-375 26-279 (283)
129 PHA03212 serine/threonine kina 100.0 7.8E-28 1.7E-32 243.1 18.8 142 127-282 91-232 (391)
130 cd05088 PTKc_Tie2 Catalytic do 100.0 1.8E-27 3.8E-32 232.9 20.6 148 129-281 8-173 (303)
131 cd07853 STKc_NLK Catalytic dom 100.0 1.5E-27 3.2E-32 240.2 20.3 185 130-320 2-208 (372)
132 cd08229 STKc_Nek7 Catalytic do 100.0 1.9E-27 4.1E-32 228.0 20.0 240 129-375 3-265 (267)
133 cd05632 STKc_GRK5 Catalytic do 100.0 3.9E-27 8.4E-32 228.4 22.2 186 130-319 2-203 (285)
134 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-27 4E-32 226.1 19.5 230 134-373 1-251 (252)
135 PTZ00036 glycogen synthase kin 100.0 1.9E-27 4.1E-32 244.0 20.9 182 128-320 66-274 (440)
136 KOG1035 eIF-2alpha kinase GCN2 100.0 1.9E-27 4.1E-32 250.9 21.1 149 126-281 477-746 (1351)
137 PHA03211 serine/threonine kina 100.0 1.3E-26 2.9E-31 237.3 27.0 143 128-284 169-312 (461)
138 KOG0986 G protein-coupled rece 100.0 6.5E-29 1.4E-33 237.1 8.7 188 128-319 185-388 (591)
139 cd05108 PTKc_EGFR Catalytic do 100.0 2E-27 4.3E-32 233.9 19.6 239 128-376 7-269 (316)
140 cd06615 PKc_MEK Catalytic doma 100.0 5.4E-27 1.2E-31 230.0 22.4 185 129-319 2-200 (308)
141 cd05048 PTKc_Ror Catalytic Dom 100.0 2.3E-27 5E-32 229.5 19.6 238 128-374 5-282 (283)
142 cd07862 STKc_CDK6 Catalytic do 100.0 4.8E-27 1E-31 228.2 21.5 185 129-318 2-210 (290)
143 cd07876 STKc_JNK2 Catalytic do 100.0 6.8E-27 1.5E-31 234.3 23.1 187 126-320 19-225 (359)
144 cd05103 PTKc_VEGFR2 Catalytic 100.0 3E-27 6.6E-32 235.3 20.4 240 128-375 7-339 (343)
145 cd05035 PTKc_Axl_like Catalyti 100.0 4.9E-27 1.1E-31 225.7 21.1 238 130-375 1-272 (273)
146 KOG0666 Cyclin C-dependent kin 100.0 1.7E-28 3.6E-33 224.2 9.8 190 128-320 24-243 (438)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 7.4E-27 1.6E-31 223.9 21.8 185 127-318 8-210 (267)
148 cd06625 STKc_MEKK3_like Cataly 100.0 8.2E-27 1.8E-31 223.0 21.9 187 129-319 3-209 (263)
149 cd05052 PTKc_Abl Catalytic dom 100.0 4.2E-27 9E-32 225.3 19.8 236 129-375 7-262 (263)
150 cd05049 PTKc_Trk Catalytic dom 100.0 6E-27 1.3E-31 226.1 21.1 237 128-373 5-279 (280)
151 cd08219 STKc_Nek3 Catalytic do 100.0 1E-26 2.2E-31 221.4 21.6 150 129-284 1-152 (255)
152 cd05054 PTKc_VEGFR Catalytic d 100.0 5E-27 1.1E-31 232.9 20.1 240 128-375 7-333 (337)
153 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-26 2.4E-31 224.5 21.8 183 135-320 1-199 (279)
154 PF00069 Pkinase: Protein kina 100.0 2.8E-27 6E-32 225.6 17.3 148 130-282 1-148 (260)
155 KOG1026 Nerve growth factor re 100.0 1.6E-27 3.5E-32 245.1 16.6 233 130-376 488-763 (774)
156 cd06619 PKc_MKK5 Catalytic dom 100.0 1.5E-26 3.3E-31 223.5 22.5 181 129-319 2-195 (279)
157 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 5.3E-27 1.1E-31 227.4 19.1 233 129-370 2-261 (286)
158 cd05090 PTKc_Ror1 Catalytic do 99.9 1.9E-26 4.2E-31 223.1 23.0 236 129-373 6-281 (283)
159 cd05053 PTKc_FGFR Catalytic do 99.9 9.1E-27 2E-31 226.5 20.8 153 128-285 12-185 (293)
160 cd05033 PTKc_EphR Catalytic do 99.9 3.2E-26 7E-31 219.4 23.8 150 128-283 4-157 (266)
161 PTZ00266 NIMA-related protein 99.9 7.8E-27 1.7E-31 250.9 21.6 237 127-369 12-293 (1021)
162 KOG0696 Serine/threonine prote 99.9 2E-28 4.4E-33 231.1 8.1 188 129-321 350-554 (683)
163 cd06630 STKc_MEKK1 Catalytic d 99.9 1.2E-26 2.5E-31 222.6 20.5 236 130-369 2-262 (268)
164 KOG0596 Dual specificity; seri 99.9 5.9E-27 1.3E-31 228.9 18.4 233 129-370 362-626 (677)
165 cd05093 PTKc_TrkB Catalytic do 99.9 3.3E-26 7.2E-31 222.1 23.7 238 128-375 5-279 (288)
166 cd07873 STKc_PCTAIRE1 Catalyti 99.9 1.3E-26 2.9E-31 226.4 21.0 185 128-319 6-207 (301)
167 cd05610 STKc_MASTL Catalytic d 99.9 5.2E-27 1.1E-31 251.9 19.8 153 128-284 4-156 (669)
168 cd05089 PTKc_Tie1 Catalytic do 99.9 9.6E-27 2.1E-31 227.0 20.0 238 129-374 3-274 (297)
169 cd05114 PTKc_Tec_Rlk Catalytic 99.9 2E-26 4.4E-31 219.5 21.8 232 129-372 5-255 (256)
170 cd05578 STKc_Yank1 Catalytic d 99.9 3.6E-27 7.7E-32 225.0 16.5 187 130-320 2-202 (258)
171 cd07863 STKc_CDK4 Catalytic do 99.9 1E-26 2.2E-31 225.6 19.9 185 129-318 1-208 (288)
172 cd05098 PTKc_FGFR1 Catalytic d 99.9 9.7E-27 2.1E-31 228.0 20.0 151 128-283 18-191 (307)
173 cd05075 PTKc_Axl Catalytic dom 99.9 1.2E-26 2.6E-31 223.0 20.2 237 130-374 1-270 (272)
174 cd05072 PTKc_Lyn Catalytic dom 99.9 1.1E-26 2.4E-31 221.9 19.8 235 128-374 6-260 (261)
175 cd07874 STKc_JNK3 Catalytic do 99.9 1.7E-26 3.6E-31 231.1 21.9 188 126-321 15-222 (355)
176 cd05107 PTKc_PDGFR_beta Cataly 99.9 9.5E-27 2.1E-31 235.3 20.2 151 128-283 37-290 (401)
177 cd05066 PTKc_EphR_A Catalytic 99.9 2E-26 4.3E-31 221.1 21.5 151 128-284 4-158 (267)
178 cd05039 PTKc_Csk_like Catalyti 99.9 1.2E-26 2.5E-31 221.2 19.6 233 128-374 6-255 (256)
179 cd07861 STKc_CDK1_euk Catalyti 99.9 1.8E-26 3.9E-31 223.4 20.8 184 130-319 2-204 (285)
180 cd05045 PTKc_RET Catalytic dom 99.9 1.5E-26 3.3E-31 224.7 20.4 237 130-375 2-286 (290)
181 cd05099 PTKc_FGFR4 Catalytic d 99.9 2E-26 4.2E-31 226.6 21.4 240 128-375 12-293 (314)
182 cd05574 STKc_phototropin_like 99.9 2.2E-26 4.7E-31 226.5 21.5 151 129-283 2-154 (316)
183 cd05606 STKc_beta_ARK Catalyti 99.9 2E-26 4.3E-31 222.6 20.8 182 135-320 1-199 (278)
184 cd05055 PTKc_PDGFR Catalytic d 99.9 2.3E-26 5E-31 224.8 21.6 239 128-374 35-300 (302)
185 cd08529 STKc_FA2-like Catalyti 99.9 3.1E-26 6.8E-31 218.0 21.9 186 130-320 2-204 (256)
186 cd05611 STKc_Rim15_like Cataly 99.9 1.7E-26 3.7E-31 220.6 20.1 183 134-319 2-195 (260)
187 cd05032 PTKc_InsR_like Catalyt 99.9 1.7E-26 3.6E-31 222.7 19.9 151 128-284 6-171 (277)
188 cd06645 STKc_MAP4K3 Catalytic 99.9 3E-26 6.6E-31 219.7 21.6 149 128-283 9-157 (267)
189 cd06651 STKc_MEKK3 Catalytic d 99.9 1.8E-26 4E-31 221.2 19.9 235 129-369 3-259 (266)
190 cd06654 STKc_PAK1 Catalytic do 99.9 4.8E-26 1E-30 222.0 23.0 236 124-370 16-269 (296)
191 PHA03207 serine/threonine kina 99.9 1E-25 2.2E-30 228.3 26.2 182 127-321 91-291 (392)
192 cd06652 STKc_MEKK2 Catalytic d 99.9 1.7E-26 3.8E-31 221.2 19.5 151 129-283 3-157 (265)
193 cd07847 STKc_CDKL1_4 Catalytic 99.9 6.6E-26 1.4E-30 219.5 23.7 187 129-320 2-204 (286)
194 cd05109 PTKc_HER2 Catalytic do 99.9 2.4E-26 5.3E-31 221.9 20.6 239 128-376 7-269 (279)
195 cd05101 PTKc_FGFR2 Catalytic d 99.9 2E-26 4.4E-31 225.5 20.2 152 128-284 15-189 (304)
196 cd05111 PTK_HER3 Pseudokinase 99.9 2.1E-26 4.5E-31 222.5 19.9 239 128-375 7-268 (279)
197 cd07875 STKc_JNK1 Catalytic do 99.9 2.6E-26 5.6E-31 230.5 21.4 186 126-319 22-227 (364)
198 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.2E-26 4.9E-31 228.2 20.4 240 128-375 12-293 (334)
199 cd05042 PTKc_Aatyk Catalytic d 99.9 1.5E-26 3.3E-31 222.1 18.6 143 134-282 1-150 (269)
200 cd06611 STKc_SLK_like Catalyti 99.9 4.1E-26 9E-31 220.4 21.7 150 127-283 4-154 (280)
201 cd05057 PTKc_EGFR_like Catalyt 99.9 9.1E-26 2E-30 217.9 24.1 238 128-375 7-268 (279)
202 cd05062 PTKc_IGF-1R Catalytic 99.9 2.2E-26 4.9E-31 222.0 19.8 152 127-284 5-171 (277)
203 cd06656 STKc_PAK3 Catalytic do 99.9 4.7E-26 1E-30 222.1 22.2 236 124-370 15-268 (297)
204 cd05036 PTKc_ALK_LTK Catalytic 99.9 2.7E-26 5.9E-31 221.4 20.3 153 128-283 6-170 (277)
205 cd05061 PTKc_InsR Catalytic do 99.9 7.3E-26 1.6E-30 219.7 23.4 150 128-283 6-170 (288)
206 cd05047 PTKc_Tie Catalytic dom 99.9 2.3E-26 5E-31 221.0 19.7 233 135-375 2-268 (270)
207 cd05577 STKc_GRK Catalytic dom 99.9 4.1E-26 8.9E-31 220.1 21.4 181 136-320 1-197 (277)
208 cd05068 PTKc_Frk_like Catalyti 99.9 2.9E-26 6.3E-31 219.1 20.2 235 128-374 6-260 (261)
209 cd06628 STKc_MAPKKK_Byr2_like 99.9 3.5E-26 7.5E-31 219.2 20.7 150 130-283 2-157 (267)
210 cd07878 STKc_p38beta_MAPK11 Ca 99.9 1.7E-26 3.7E-31 229.9 19.2 188 126-320 13-219 (343)
211 cd05051 PTKc_DDR Catalytic dom 99.9 4.1E-26 9E-31 222.2 21.4 152 128-285 5-183 (296)
212 cd05059 PTKc_Tec_like Catalyti 99.9 2.2E-26 4.8E-31 219.3 19.1 147 129-284 5-152 (256)
213 cd06644 STKc_STK10_LOK Catalyt 99.9 8E-26 1.7E-30 219.9 23.3 151 126-283 10-161 (292)
214 cd05097 PTKc_DDR_like Catalyti 99.9 3.1E-26 6.7E-31 223.2 20.2 152 128-285 5-182 (295)
215 KOG0669 Cyclin T-dependent kin 99.9 1.5E-28 3.2E-33 218.4 3.4 184 129-318 18-230 (376)
216 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.2E-26 2.7E-31 221.6 16.9 236 128-374 6-260 (261)
217 cd06643 STKc_SLK Catalytic dom 99.9 4.6E-26 1E-30 220.4 21.1 149 128-283 5-154 (282)
218 PHA03210 serine/threonine kina 99.9 5.6E-26 1.2E-30 236.7 23.1 187 125-316 145-367 (501)
219 cd08221 STKc_Nek9 Catalytic do 99.9 7.9E-26 1.7E-30 215.4 22.1 186 129-319 1-203 (256)
220 cd00192 PTKc Catalytic domain 99.9 3.9E-26 8.5E-31 217.6 19.9 230 134-372 1-261 (262)
221 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.2E-25 2.6E-30 215.6 23.3 238 129-375 6-267 (268)
222 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 9E-26 2E-30 218.4 22.6 149 130-285 6-160 (283)
223 cd06640 STKc_MST4 Catalytic do 99.9 1.6E-25 3.4E-30 216.1 24.1 185 128-319 4-203 (277)
224 cd05065 PTKc_EphR_B Catalytic 99.9 5.4E-26 1.2E-30 218.3 20.7 150 129-284 5-158 (269)
225 cd05113 PTKc_Btk_Bmx Catalytic 99.9 8.1E-26 1.8E-30 215.5 21.8 149 128-285 4-153 (256)
226 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.3E-25 2.9E-30 217.3 23.5 152 128-286 4-162 (284)
227 cd05071 PTKc_Src Catalytic dom 99.9 4.8E-26 1E-30 217.9 20.0 234 128-374 6-259 (262)
228 KOG0584 Serine/threonine prote 99.9 1.5E-27 3.2E-32 237.1 9.8 157 131-290 43-204 (632)
229 KOG1151 Tousled-like protein k 99.9 1.6E-27 3.4E-32 226.8 9.6 159 126-285 461-626 (775)
230 cd05060 PTKc_Syk_like Catalyti 99.9 7.1E-26 1.5E-30 215.9 21.0 231 134-374 1-254 (257)
231 cd07868 STKc_CDK8 Catalytic do 99.9 7.9E-26 1.7E-30 222.6 22.0 180 133-319 6-218 (317)
232 cd05095 PTKc_DDR2 Catalytic do 99.9 6.8E-26 1.5E-30 220.9 21.3 151 128-284 5-182 (296)
233 cd05116 PTKc_Syk Catalytic dom 99.9 1.4E-25 3E-30 214.0 22.9 231 135-374 2-254 (257)
234 cd07841 STKc_CDK7 Catalytic do 99.9 6.6E-26 1.4E-30 221.0 21.1 150 130-284 2-154 (298)
235 KOG1006 Mitogen-activated prot 99.9 6.1E-28 1.3E-32 216.1 6.0 146 131-282 67-218 (361)
236 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 6.1E-26 1.3E-30 219.8 20.6 186 128-319 5-204 (284)
237 cd06637 STKc_TNIK Catalytic do 99.9 5E-26 1.1E-30 218.8 19.8 186 127-319 5-218 (272)
238 cd05091 PTKc_Ror2 Catalytic do 99.9 3.6E-26 7.8E-31 221.2 18.9 237 129-374 6-282 (283)
239 cd05073 PTKc_Hck Catalytic dom 99.9 9.3E-26 2E-30 215.6 21.5 235 127-374 5-259 (260)
240 cd05046 PTK_CCK4 Pseudokinase 99.9 9.9E-26 2.2E-30 217.1 21.8 149 128-282 5-167 (275)
241 cd06613 STKc_MAP4K3_like Catal 99.9 8.9E-26 1.9E-30 215.6 21.1 150 128-284 3-153 (262)
242 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 4.7E-26 1E-30 218.7 19.2 143 134-282 1-150 (269)
243 cd05094 PTKc_TrkC Catalytic do 99.9 1.4E-25 3.1E-30 218.0 22.7 238 129-376 6-283 (291)
244 cd05067 PTKc_Lck_Blk Catalytic 99.9 5.8E-26 1.2E-30 216.9 19.6 235 127-374 5-259 (260)
245 cd05082 PTKc_Csk Catalytic dom 99.9 4.8E-26 1E-30 217.0 18.9 232 129-374 7-255 (256)
246 cd06631 STKc_YSK4 Catalytic do 99.9 1.2E-25 2.6E-30 215.3 21.8 148 130-282 2-152 (265)
247 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 6.7E-26 1.4E-30 216.5 19.7 234 128-374 6-259 (260)
248 cd06917 STKc_NAK1_like Catalyt 99.9 2.8E-25 6E-30 214.2 24.2 233 129-370 2-254 (277)
249 KOG0196 Tyrosine kinase, EPH ( 99.9 3.5E-26 7.5E-31 231.3 18.1 274 130-443 631-956 (996)
250 cd08223 STKc_Nek4 Catalytic do 99.9 1.3E-25 2.9E-30 213.9 21.3 185 130-319 2-204 (257)
251 COG5126 FRQ1 Ca2+-binding prot 99.9 4.3E-26 9.4E-31 193.3 15.8 145 337-482 11-158 (160)
252 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.3E-25 2.8E-30 217.5 21.5 152 129-286 5-163 (284)
253 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.3E-25 2.9E-30 217.1 21.5 184 129-318 2-208 (283)
254 KOG0668 Casein kinase II, alph 99.9 1.7E-27 3.7E-32 208.9 7.3 177 127-314 37-230 (338)
255 cd06626 STKc_MEKK4 Catalytic d 99.9 1E-25 2.2E-30 215.4 20.1 151 129-284 1-151 (264)
256 cd06638 STKc_myosinIIIA Cataly 99.9 2.6E-25 5.5E-30 215.5 23.1 153 125-284 15-176 (286)
257 cd06655 STKc_PAK2 Catalytic do 99.9 2.7E-25 5.8E-30 216.7 23.3 186 126-319 17-217 (296)
258 cd07839 STKc_CDK5 Catalytic do 99.9 2.8E-26 6E-31 222.0 16.2 150 129-284 1-151 (284)
259 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.3E-25 2.8E-30 217.1 20.7 152 128-285 4-162 (284)
260 KOG0614 cGMP-dependent protein 99.9 2.8E-28 6.1E-33 235.5 2.0 186 130-321 422-623 (732)
261 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.7E-25 3.7E-30 215.1 21.4 151 129-283 2-159 (272)
262 cd07846 STKc_CDKL2_3 Catalytic 99.9 1.1E-25 2.4E-30 218.0 20.2 186 129-319 2-203 (286)
263 KOG4279 Serine/threonine prote 99.9 7.7E-27 1.7E-31 232.7 12.1 225 135-369 582-830 (1226)
264 cd07837 STKc_CdkB_plant Cataly 99.9 1.5E-25 3.2E-30 218.2 20.9 150 129-283 2-162 (295)
265 cd06632 STKc_MEKK1_plant Catal 99.9 1.6E-25 3.5E-30 213.2 20.7 186 130-319 2-204 (258)
266 KOG1152 Signal transduction se 99.9 1.2E-26 2.6E-31 227.5 12.8 165 129-296 562-734 (772)
267 cd06623 PKc_MAPKK_plant_like C 99.9 2.2E-25 4.8E-30 213.0 21.4 186 129-320 2-203 (264)
268 cd05581 STKc_PDK1 Catalytic do 99.9 6.5E-26 1.4E-30 218.6 17.9 153 129-284 2-154 (280)
269 cd05572 STKc_cGK_PKG Catalytic 99.9 7.4E-26 1.6E-30 216.4 18.1 180 136-319 1-194 (262)
270 KOG4721 Serine/threonine prote 99.9 8.9E-26 1.9E-30 220.8 18.6 219 133-374 129-367 (904)
271 cd07845 STKc_CDK10 Catalytic d 99.9 1.7E-25 3.6E-30 219.5 20.9 152 127-284 6-160 (309)
272 cd05092 PTKc_TrkA Catalytic do 99.9 1.3E-25 2.8E-30 217.1 19.8 235 129-373 6-279 (280)
273 cd05034 PTKc_Src_like Catalyti 99.9 1.2E-25 2.6E-30 214.8 19.2 236 127-374 5-260 (261)
274 cd07858 STKc_TEY_MAPK_plant Ca 99.9 2.4E-25 5.3E-30 221.1 22.2 187 128-320 5-212 (337)
275 cd05056 PTKc_FAK Catalytic dom 99.9 2E-25 4.3E-30 214.5 20.7 238 128-375 6-265 (270)
276 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.3E-25 2.9E-30 216.5 19.6 232 128-370 4-252 (277)
277 KOG0671 LAMMER dual specificit 99.9 1E-25 2.2E-30 211.7 17.9 199 116-320 77-312 (415)
278 KOG2345 Serine/threonine prote 99.9 4E-26 8.6E-31 202.7 14.3 235 128-375 21-300 (302)
279 cd07832 STKc_CCRK Catalytic do 99.9 3.1E-25 6.7E-30 214.8 22.0 185 129-319 1-203 (286)
280 cd05115 PTKc_Zap-70 Catalytic 99.9 2.4E-25 5.3E-30 212.4 21.0 144 135-285 2-148 (257)
281 cd06610 STKc_OSR1_SPAK Catalyt 99.9 5.8E-25 1.3E-29 210.5 23.6 186 129-320 2-210 (267)
282 PF07714 Pkinase_Tyr: Protein 99.9 2.7E-25 5.9E-30 212.3 21.1 233 131-372 2-259 (259)
283 cd06641 STKc_MST3 Catalytic do 99.9 4E-25 8.7E-30 213.2 22.5 150 128-284 4-153 (277)
284 cd05050 PTKc_Musk Catalytic do 99.9 3E-25 6.6E-30 215.3 21.7 150 128-283 5-181 (288)
285 cd08220 STKc_Nek8 Catalytic do 99.9 2.5E-25 5.5E-30 211.7 20.8 187 129-319 1-203 (256)
286 cd06653 STKc_MEKK3_like_1 Cata 99.9 1.7E-25 3.7E-30 214.2 19.6 151 129-283 3-157 (264)
287 smart00219 TyrKc Tyrosine kina 99.9 2.1E-25 4.5E-30 212.4 19.8 149 131-285 2-156 (258)
288 cd05613 STKc_MSK1_N N-terminal 99.9 2.4E-25 5.1E-30 216.3 20.5 186 130-318 2-209 (290)
289 cd06609 STKc_MST3_like Catalyt 99.9 3.2E-25 7E-30 213.4 21.1 184 129-319 2-200 (274)
290 cd05069 PTKc_Yes Catalytic dom 99.9 2.1E-25 4.6E-30 213.1 19.5 234 128-374 6-259 (260)
291 cd05085 PTKc_Fer Catalytic dom 99.9 3.4E-25 7.3E-30 210.2 20.7 142 135-283 2-144 (250)
292 cd05110 PTKc_HER4 Catalytic do 99.9 1.2E-25 2.6E-30 219.9 18.1 239 128-376 7-269 (303)
293 cd08217 STKc_Nek2 Catalytic do 99.9 3E-25 6.4E-30 212.0 20.3 186 129-319 1-212 (265)
294 cd08218 STKc_Nek1 Catalytic do 99.9 3.3E-25 7.2E-30 211.1 20.5 151 129-284 1-153 (256)
295 PRK09188 serine/threonine prot 99.9 8.6E-26 1.9E-30 221.9 16.8 143 128-285 18-165 (365)
296 cd06635 STKc_TAO1 Catalytic do 99.9 9.4E-25 2E-29 215.0 24.3 238 127-372 24-278 (317)
297 cd07860 STKc_CDK2_3 Catalytic 99.9 1.7E-25 3.6E-30 216.6 18.6 185 130-320 2-204 (284)
298 cd05579 STKc_MAST_like Catalyt 99.9 7E-26 1.5E-30 216.4 15.7 146 136-285 1-146 (265)
299 cd06607 STKc_TAO Catalytic dom 99.9 8.8E-25 1.9E-29 214.2 23.8 188 126-318 13-215 (307)
300 cd07870 STKc_PFTAIRE2 Catalyti 99.9 4.8E-25 1E-29 214.2 21.7 184 128-318 5-205 (291)
301 cd07843 STKc_CDC2L1 Catalytic 99.9 2.2E-25 4.8E-30 216.9 19.3 152 128-285 5-159 (293)
302 cd07844 STKc_PCTAIRE_like Cata 99.9 3.9E-25 8.5E-30 214.8 20.9 148 128-282 5-153 (291)
303 cd05041 PTKc_Fes_like Catalyti 99.9 4.5E-25 9.8E-30 209.5 20.5 143 134-283 1-144 (251)
304 cd06627 STKc_Cdc7_like Catalyt 99.9 6E-25 1.3E-29 208.7 21.3 154 129-287 1-154 (254)
305 cd06612 STKc_MST1_2 Catalytic 99.9 9.4E-25 2E-29 207.8 22.6 183 128-319 3-201 (256)
306 cd07836 STKc_Pho85 Catalytic d 99.9 4.7E-25 1E-29 213.4 20.8 186 130-322 2-206 (284)
307 cd07867 STKc_CDC2L6 Catalytic 99.9 4.3E-25 9.2E-30 217.3 20.6 179 133-318 6-217 (317)
308 cd08227 PK_STRAD_alpha Pseudok 99.9 8.3E-25 1.8E-29 216.3 22.8 145 132-281 2-150 (327)
309 cd06624 STKc_ASK Catalytic dom 99.9 7.1E-25 1.5E-29 210.4 21.7 180 134-319 14-213 (268)
310 cd06608 STKc_myosinIII_like Ca 99.9 5.5E-25 1.2E-29 211.5 20.9 185 127-318 5-219 (275)
311 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 1.5E-24 3.3E-29 210.4 24.0 186 129-320 2-206 (287)
312 cd06605 PKc_MAPKK Catalytic do 99.9 3.1E-25 6.6E-30 212.3 18.9 185 129-319 2-201 (265)
313 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.9E-25 4.2E-30 222.3 18.1 186 126-319 13-218 (343)
314 KOG0587 Traf2- and Nck-interac 99.9 7.3E-26 1.6E-30 232.0 15.3 188 127-322 18-212 (953)
315 KOG4645 MAPKKK (MAP kinase kin 99.9 2.8E-27 6E-32 250.7 4.9 238 125-370 1232-1493(1509)
316 cd05083 PTKc_Chk Catalytic dom 99.9 2.7E-25 5.8E-30 211.6 18.0 144 128-283 6-151 (254)
317 KOG0695 Serine/threonine prote 99.9 4.1E-26 8.9E-31 210.3 11.7 186 128-318 250-452 (593)
318 PLN00009 cyclin-dependent kina 99.9 1.1E-24 2.5E-29 211.9 22.6 187 128-319 2-206 (294)
319 cd05043 PTK_Ryk Pseudokinase d 99.9 4.7E-25 1E-29 213.0 19.7 239 128-375 6-276 (280)
320 cd06647 STKc_PAK_I Catalytic d 99.9 6.3E-25 1.4E-29 213.7 20.6 186 126-319 17-217 (293)
321 cd06636 STKc_MAP4K4_6 Catalyti 99.9 8.8E-25 1.9E-29 211.3 21.5 149 128-283 16-172 (282)
322 cd07833 STKc_CDKL Catalytic do 99.9 6.2E-25 1.4E-29 212.9 20.3 186 129-319 2-204 (288)
323 cd06639 STKc_myosinIIIB Cataly 99.9 1.6E-24 3.4E-29 210.6 23.2 188 125-319 19-235 (291)
324 cd05040 PTKc_Ack_like Catalyti 99.9 1.1E-24 2.4E-29 207.5 21.5 144 134-284 1-149 (257)
325 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.9E-25 8.4E-30 210.8 18.3 145 134-284 1-160 (259)
326 PHA03209 serine/threonine kina 99.9 2.7E-25 5.9E-30 222.4 18.0 140 129-282 67-207 (357)
327 cd07850 STKc_JNK Catalytic dom 99.9 1E-24 2.3E-29 218.0 22.1 186 126-319 14-219 (353)
328 KOG0984 Mitogen-activated prot 99.9 1.7E-25 3.7E-30 193.5 14.0 152 129-286 47-203 (282)
329 cd07855 STKc_ERK5 Catalytic do 99.9 3.9E-25 8.5E-30 219.3 18.7 188 128-321 5-216 (334)
330 cd06658 STKc_PAK5 Catalytic do 99.9 1.5E-25 3.2E-30 218.1 15.3 186 125-318 19-219 (292)
331 PTZ00024 cyclin-dependent prot 99.9 7E-25 1.5E-29 217.6 20.5 153 126-283 6-170 (335)
332 cd06659 STKc_PAK6 Catalytic do 99.9 5E-25 1.1E-29 214.9 18.7 182 129-318 22-218 (297)
333 cd05074 PTKc_Tyro3 Catalytic d 99.9 6.9E-25 1.5E-29 210.9 19.2 151 130-285 1-166 (273)
334 PHA03390 pk1 serine/threonine- 99.9 1.2E-24 2.6E-29 208.8 20.9 182 128-320 14-209 (267)
335 cd07842 STKc_CDK8_like Catalyt 99.9 8.6E-25 1.9E-29 214.9 20.1 189 130-320 2-219 (316)
336 cd06606 STKc_MAPKKK Catalytic 99.9 2E-24 4.4E-29 205.2 22.0 232 130-369 2-255 (260)
337 cd05123 STKc_AGC Catalytic dom 99.9 9.5E-25 2.1E-29 207.0 19.6 146 136-285 1-146 (250)
338 KOG1095 Protein tyrosine kinas 99.9 5.3E-25 1.1E-29 234.5 19.6 157 128-290 692-860 (1025)
339 cd07831 STKc_MOK Catalytic dom 99.9 1.9E-24 4.1E-29 208.8 21.7 184 130-320 1-202 (282)
340 cd08225 STKc_Nek5 Catalytic do 99.9 8E-25 1.7E-29 208.4 18.7 185 129-318 1-203 (257)
341 KOG0664 Nemo-like MAPK-related 99.9 2.2E-27 4.7E-32 213.2 0.9 182 132-319 57-260 (449)
342 cd05583 STKc_MSK_N N-terminal 99.9 7.8E-25 1.7E-29 212.4 18.7 187 130-319 2-210 (288)
343 cd05147 RIO1_euk RIO kinase fa 99.9 1.6E-25 3.5E-30 202.5 12.9 144 133-284 2-169 (190)
344 cd07840 STKc_CDK9_like Catalyt 99.9 1.5E-24 3.3E-29 209.9 20.6 185 130-320 1-205 (287)
345 cd07865 STKc_CDK9 Catalytic do 99.9 1E-24 2.2E-29 213.7 19.6 151 127-283 11-170 (310)
346 cd05112 PTKc_Itk Catalytic dom 99.9 3.5E-24 7.6E-29 204.0 22.7 146 129-283 5-151 (256)
347 cd05044 PTKc_c-ros Catalytic d 99.9 5.3E-25 1.2E-29 211.2 17.2 233 135-373 2-268 (269)
348 cd07849 STKc_ERK1_2_like Catal 99.9 9.1E-25 2E-29 216.9 19.4 186 126-319 3-212 (336)
349 cd05086 PTKc_Aatyk2 Catalytic 99.9 8.2E-25 1.8E-29 210.1 18.2 141 135-281 2-148 (268)
350 cd08215 STKc_Nek Catalytic dom 99.9 2.5E-24 5.3E-29 204.7 21.3 153 129-286 1-157 (258)
351 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 1.9E-25 4.2E-30 213.1 13.7 148 134-285 1-161 (258)
352 cd06648 STKc_PAK_II Catalytic 99.9 3.7E-24 8E-29 207.5 22.6 183 129-319 20-217 (285)
353 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.8E-24 3.8E-29 208.5 20.0 144 135-282 2-174 (274)
354 cd08528 STKc_Nek10 Catalytic d 99.9 1.7E-24 3.7E-29 207.8 19.8 237 130-372 2-267 (269)
355 cd06634 STKc_TAO2 Catalytic do 99.9 3.8E-24 8.2E-29 209.8 22.1 187 127-318 14-215 (308)
356 cd08530 STKc_CNK2-like Catalyt 99.9 1.9E-24 4.1E-29 205.6 18.9 184 130-318 2-202 (256)
357 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 6.2E-24 1.3E-28 210.1 23.2 188 126-320 8-209 (328)
358 cd06657 STKc_PAK4 Catalytic do 99.9 9.4E-25 2E-29 212.4 17.1 237 129-376 21-277 (292)
359 cd05058 PTKc_Met_Ron Catalytic 99.9 2.6E-24 5.6E-29 205.6 19.8 144 134-283 1-149 (262)
360 cd07835 STKc_CDK1_like Catalyt 99.9 1.8E-24 3.9E-29 209.2 18.9 184 130-319 1-202 (283)
361 KOG0603 Ribosomal protein S6 k 99.9 5.5E-25 1.2E-29 219.7 15.5 231 123-370 317-562 (612)
362 cd05122 PKc_STE Catalytic doma 99.9 4.1E-24 9E-29 202.3 20.6 182 130-318 2-198 (253)
363 cd07864 STKc_CDK12 Catalytic d 99.9 1.6E-24 3.5E-29 211.6 18.0 186 128-319 7-220 (302)
364 cd06633 STKc_TAO3 Catalytic do 99.9 9.4E-24 2E-28 207.5 23.3 188 126-318 19-221 (313)
365 cd07834 STKc_MAPK Catalytic do 99.9 2.7E-24 5.8E-29 212.9 19.6 186 129-320 1-210 (330)
366 cd07852 STKc_MAPK15 Catalytic 99.9 4.1E-24 8.9E-29 212.3 20.9 188 126-319 5-215 (337)
367 cd07830 STKc_MAK_like Catalyti 99.9 2.1E-24 4.6E-29 208.7 18.3 185 130-320 1-202 (283)
368 cd07838 STKc_CDK4_6_like Catal 99.9 1.1E-23 2.4E-28 203.9 22.9 185 130-319 1-208 (287)
369 cd08226 PK_STRAD_beta Pseudoki 99.9 5.1E-24 1.1E-28 210.8 20.8 142 134-280 4-149 (328)
370 cd07877 STKc_p38alpha_MAPK14 C 99.9 4.9E-24 1.1E-28 212.4 20.4 186 126-319 15-220 (345)
371 cd06614 STKc_PAK Catalytic dom 99.9 9.3E-24 2E-28 204.7 21.9 151 126-284 17-168 (286)
372 KOG0027 Calmodulin and related 99.9 2.1E-24 4.6E-29 187.8 15.2 141 340-480 2-149 (151)
373 cd07857 STKc_MPK1 Catalytic do 99.9 4.8E-24 1E-28 211.4 19.8 150 130-284 2-157 (332)
374 cd06616 PKc_MKK4 Catalytic dom 99.9 4.7E-24 1E-28 206.9 18.9 185 129-319 5-212 (288)
375 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 8.5E-24 1.8E-28 202.3 19.6 146 134-283 1-163 (262)
376 cd07829 STKc_CDK_like Catalyti 99.9 4.5E-24 9.7E-29 206.1 16.8 186 130-321 1-203 (282)
377 cd07851 STKc_p38 Catalytic dom 99.9 4.1E-24 8.9E-29 212.8 16.9 189 125-320 12-219 (343)
378 cd05145 RIO1_like RIO kinase f 99.9 4.7E-24 1E-28 193.6 15.7 145 133-285 2-170 (190)
379 cd07854 STKc_MAPK4_6 Catalytic 99.9 8E-24 1.7E-28 210.6 18.7 149 127-283 4-166 (342)
380 PHA02882 putative serine/threo 99.9 1.7E-23 3.8E-28 203.7 20.5 188 128-320 12-236 (294)
381 KOG0576 Mitogen-activated prot 99.9 4.3E-26 9.2E-31 227.1 1.9 189 125-323 12-200 (829)
382 cd05118 STKc_CMGC Catalytic do 99.9 1.3E-23 2.9E-28 202.9 19.2 186 130-321 1-203 (283)
383 PLN03225 Serine/threonine-prot 99.9 6.9E-24 1.5E-28 222.5 17.9 148 127-284 131-308 (566)
384 KOG4278 Protein tyrosine kinas 99.9 9E-24 2E-28 208.6 16.6 250 130-391 269-541 (1157)
385 cd07866 STKc_BUR1 Catalytic do 99.9 8.6E-24 1.9E-28 207.2 16.5 150 128-283 8-166 (311)
386 cd06618 PKc_MKK7 Catalytic dom 99.9 5.2E-23 1.1E-27 200.5 21.8 185 128-318 15-219 (296)
387 cd08222 STKc_Nek11 Catalytic d 99.9 1E-23 2.2E-28 201.4 15.9 152 129-285 1-158 (260)
388 cd08216 PK_STRAD Pseudokinase 99.9 4.9E-23 1.1E-27 202.4 21.2 146 131-283 5-152 (314)
389 KOG0199 ACK and related non-re 99.9 6.8E-24 1.5E-28 212.2 14.8 156 128-290 110-270 (1039)
390 cd05576 STKc_RPK118_like Catal 99.9 2.3E-23 4.9E-28 196.3 17.2 167 139-317 4-182 (237)
391 KOG4257 Focal adhesion tyrosin 99.9 3.2E-23 6.9E-28 205.0 18.7 238 128-375 389-649 (974)
392 KOG1163 Casein kinase (serine/ 99.9 2.2E-23 4.8E-28 184.5 15.1 154 128-287 15-169 (341)
393 cd07879 STKc_p38delta_MAPK13 C 99.9 5E-23 1.1E-27 204.9 19.1 186 127-320 14-218 (342)
394 KOG1345 Serine/threonine kinas 99.9 2E-24 4.4E-29 194.1 8.0 154 125-284 21-175 (378)
395 PLN03224 probable serine/threo 99.9 1.9E-22 4.1E-27 206.7 20.9 154 127-284 144-361 (507)
396 KOG0670 U4/U6-associated splic 99.9 4.4E-24 9.6E-29 207.1 8.3 190 126-322 430-640 (752)
397 PRK10345 hypothetical protein; 99.9 1.1E-22 2.3E-27 185.8 15.6 141 133-282 7-159 (210)
398 KOG1290 Serine/threonine prote 99.9 3E-22 6.5E-27 193.4 18.6 136 125-265 74-224 (590)
399 KOG0028 Ca2+-binding protein ( 99.9 3.9E-22 8.5E-27 164.4 14.6 144 338-481 25-171 (172)
400 KOG3653 Transforming growth fa 99.9 7.5E-23 1.6E-27 197.1 10.5 155 130-296 212-384 (534)
401 KOG1165 Casein kinase (serine/ 99.9 2E-22 4.2E-27 186.3 12.6 154 129-288 29-185 (449)
402 KOG1025 Epidermal growth facto 99.9 2.2E-22 4.8E-27 204.6 13.7 184 130-324 698-886 (1177)
403 PLN00113 leucine-rich repeat r 99.9 3.7E-21 8.1E-26 217.0 21.5 232 129-375 691-951 (968)
404 smart00221 STYKc Protein kinas 99.9 6.6E-21 1.4E-25 177.2 19.5 150 130-285 1-151 (225)
405 PRK10359 lipopolysaccharide co 99.9 1.7E-21 3.8E-26 178.3 14.4 143 126-283 29-185 (232)
406 KOG2052 Activin A type IB rece 99.9 5.1E-21 1.1E-25 183.2 17.9 147 127-285 210-369 (513)
407 KOG0665 Jun-N-terminal kinase 99.9 2.3E-22 4.9E-27 185.1 8.3 185 128-321 17-221 (369)
408 smart00090 RIO RIO-like kinase 99.9 1.1E-21 2.4E-26 183.5 12.7 148 129-285 29-201 (237)
409 PRK12274 serine/threonine prot 99.9 4.3E-21 9.3E-26 171.9 14.8 137 131-283 5-143 (218)
410 KOG1027 Serine/threonine prote 99.9 1E-21 2.2E-26 200.8 12.2 149 130-287 511-666 (903)
411 KOG1167 Serine/threonine prote 99.9 3.4E-22 7.4E-27 190.5 7.3 146 126-281 34-182 (418)
412 cd00180 PKc Catalytic domain o 99.9 2.4E-20 5.2E-25 170.8 18.5 145 136-286 1-147 (215)
413 smart00220 S_TKc Serine/Threon 99.8 6.3E-20 1.4E-24 172.3 19.2 140 140-285 1-140 (244)
414 PTZ00183 centrin; Provisional 99.8 6E-20 1.3E-24 161.6 16.3 146 338-483 9-157 (158)
415 KOG1164 Casein kinase (serine/ 99.8 3E-20 6.6E-25 182.9 15.3 150 129-282 19-177 (322)
416 PRK14879 serine/threonine prot 99.8 5.3E-20 1.1E-24 170.1 15.6 138 134-282 2-144 (211)
417 PTZ00184 calmodulin; Provision 99.8 8.7E-20 1.9E-24 158.8 15.7 143 338-480 3-148 (149)
418 KOG0200 Fibroblast/platelet-de 99.8 2.7E-19 5.8E-24 189.7 21.4 155 130-289 298-475 (609)
419 KOG0031 Myosin regulatory ligh 99.8 2.3E-19 5E-24 146.9 15.5 139 338-480 24-165 (171)
420 TIGR03724 arch_bud32 Kae1-asso 99.8 1.4E-19 2.9E-24 165.8 14.1 135 135-283 1-140 (199)
421 cd05144 RIO2_C RIO kinase fami 99.8 9.6E-20 2.1E-24 166.6 12.9 140 130-284 17-177 (198)
422 PRK09605 bifunctional UGMP fam 99.8 4.3E-19 9.4E-24 186.4 15.7 140 129-283 334-478 (535)
423 KOG0030 Myosin essential light 99.8 9.1E-19 2E-23 141.0 12.2 139 340-479 5-150 (152)
424 cd05119 RIO RIO kinase family, 99.8 6.3E-19 1.4E-23 159.7 12.7 142 133-284 2-166 (187)
425 KOG1166 Mitotic checkpoint ser 99.8 5.9E-18 1.3E-22 181.0 15.2 181 128-317 698-903 (974)
426 COG0515 SPS1 Serine/threonine 99.8 1.9E-17 4.1E-22 162.2 17.1 149 130-285 2-155 (384)
427 PRK01723 3-deoxy-D-manno-octul 99.8 2.1E-17 4.6E-22 154.9 15.9 139 134-283 37-193 (239)
428 KOG0034 Ca2+/calmodulin-depend 99.7 1.9E-17 4E-22 146.1 13.1 142 339-484 26-179 (187)
429 KOG0037 Ca2+-binding protein, 99.7 1.5E-17 3.2E-22 145.4 11.1 138 345-488 56-196 (221)
430 KOG0044 Ca2+ sensor (EF-Hand s 99.7 3.7E-17 7.9E-22 144.1 13.0 145 338-484 21-179 (193)
431 cd05120 APH_ChoK_like Aminogly 99.7 5.3E-17 1.1E-21 141.1 12.5 135 132-283 2-140 (155)
432 KOG0590 Checkpoint kinase and 99.7 1.1E-17 2.4E-22 175.3 7.5 155 128-287 317-475 (601)
433 KOG0036 Predicted mitochondria 99.7 7.3E-16 1.6E-20 146.1 14.6 136 339-479 7-145 (463)
434 KOG0603 Ribosomal protein S6 k 99.6 1.3E-17 2.8E-22 167.3 -1.6 183 135-325 1-214 (612)
435 KOG0038 Ca2+-binding kinase in 99.6 3E-14 6.6E-19 115.5 13.0 146 339-488 21-185 (189)
436 PLN00181 protein SPA1-RELATED; 99.6 9.4E-16 2E-20 168.9 4.7 94 187-281 30-148 (793)
437 TIGR01982 UbiB 2-polyprenylphe 99.6 2E-14 4.3E-19 146.4 13.3 144 134-284 123-309 (437)
438 PRK04750 ubiB putative ubiquin 99.6 1.6E-15 3.4E-20 156.1 5.1 148 130-285 122-317 (537)
439 KOG1024 Receptor-like protein 99.6 1E-13 2.2E-18 131.4 15.4 154 128-287 284-451 (563)
440 cd05146 RIO3_euk RIO kinase fa 99.5 2.2E-13 4.7E-18 122.3 14.4 143 134-284 3-176 (197)
441 cd05151 ChoK Choline Kinase (C 99.5 9E-14 1.9E-18 123.7 10.7 129 134-282 4-137 (170)
442 KOG4158 BRPK/PTEN-induced prot 99.5 4.2E-14 9E-19 134.4 6.4 95 185-281 272-394 (598)
443 PF14531 Kinase-like: Kinase-l 99.4 6.3E-13 1.4E-17 125.7 10.9 188 129-320 13-253 (288)
444 KOG3087 Serine/threonine prote 99.4 4.7E-12 1E-16 109.1 15.0 153 132-287 11-171 (229)
445 KOG0606 Microtubule-associated 99.4 5.4E-14 1.2E-18 148.4 3.4 111 128-282 83-193 (1205)
446 KOG4223 Reticulocalbin, calume 99.4 1E-12 2.2E-17 121.8 9.3 139 343-481 74-229 (325)
447 COG3642 Mn2+-dependent serine/ 99.4 8.3E-12 1.8E-16 108.2 13.8 138 135-286 3-145 (204)
448 KOG1240 Protein kinase contain 99.4 2.1E-13 4.6E-18 144.2 2.9 144 129-280 24-168 (1431)
449 PLN02964 phosphatidylserine de 99.4 4.6E-12 9.9E-17 131.5 12.6 105 338-446 135-243 (644)
450 cd05022 S-100A13 S-100A13: S-1 99.3 1.8E-12 4E-17 100.5 5.9 63 418-480 8-75 (89)
451 PF13499 EF-hand_7: EF-hand do 99.3 9.3E-12 2E-16 92.0 6.8 60 419-478 1-66 (66)
452 KOG4223 Reticulocalbin, calume 99.3 1.4E-11 3E-16 114.4 8.7 133 344-476 161-301 (325)
453 cd05154 ACAD10_11_like Acyl-Co 99.3 3.2E-11 6.9E-16 112.1 11.0 145 134-283 4-208 (223)
454 KOG0027 Calmodulin and related 99.2 1.3E-10 2.7E-15 101.1 9.9 102 382-483 8-116 (151)
455 cd05027 S-100B S-100B: S-100B 99.2 5.8E-11 1.2E-15 92.3 6.6 63 418-480 8-79 (88)
456 KOG0601 Cyclin-dependent kinas 99.2 1E-10 2.2E-15 118.1 9.9 157 125-286 111-277 (524)
457 KOG0590 Checkpoint kinase and 99.1 2.3E-12 5E-17 135.5 -3.1 151 130-284 22-177 (601)
458 KOG0377 Protein serine/threoni 99.1 5E-10 1.1E-14 107.2 12.0 131 347-479 465-614 (631)
459 PRK15123 lipopolysaccharide co 99.1 3.3E-09 7.3E-14 100.7 16.8 137 143-281 37-194 (268)
460 cd05022 S-100A13 S-100A13: S-1 99.1 3.3E-10 7.1E-15 87.9 7.7 69 343-411 5-76 (89)
461 PF01163 RIO1: RIO1 family; I 99.1 8.7E-10 1.9E-14 98.7 11.4 132 143-285 1-159 (188)
462 cd05026 S-100Z S-100Z: S-100Z 99.1 2.1E-10 4.5E-15 90.5 6.5 64 418-481 10-82 (93)
463 cd00052 EH Eps15 homology doma 99.1 2.4E-10 5.2E-15 84.6 6.2 60 421-480 2-61 (67)
464 PTZ00183 centrin; Provisional 99.1 9.4E-10 2E-14 96.5 10.2 101 382-482 17-120 (158)
465 smart00027 EH Eps15 homology d 99.1 3.6E-10 7.8E-15 90.1 6.8 64 417-480 9-72 (96)
466 PF13499 EF-hand_7: EF-hand do 99.1 4.4E-10 9.5E-15 82.9 6.7 62 347-408 1-66 (66)
467 cd05029 S-100A6 S-100A6: S-100 99.1 4E-10 8.6E-15 87.6 6.5 63 419-481 11-80 (88)
468 KOG0037 Ca2+-binding protein, 99.0 4.4E-09 9.6E-14 92.6 13.3 121 348-478 96-218 (221)
469 KOG0601 Cyclin-dependent kinas 99.0 1.3E-10 2.7E-15 117.3 3.5 151 128-281 265-416 (524)
470 cd05025 S-100A1 S-100A1: S-100 99.0 4.6E-10 1E-14 88.7 5.9 64 417-480 8-80 (92)
471 cd05031 S-100A10_like S-100A10 99.0 3.9E-10 8.4E-15 89.5 5.5 67 417-483 7-82 (94)
472 KOG1033 eIF-2alpha kinase PEK/ 99.0 4.7E-11 1E-15 118.3 -0.7 78 203-286 330-410 (516)
473 cd05023 S-100A11 S-100A11: S-1 99.0 8.3E-10 1.8E-14 86.0 6.4 64 418-481 9-81 (89)
474 KOG0044 Ca2+ sensor (EF-Hand s 99.0 1.6E-09 3.5E-14 95.9 9.0 101 346-446 64-175 (193)
475 cd05027 S-100B S-100B: S-100B 99.0 2E-09 4.4E-14 83.7 8.5 69 343-411 5-80 (88)
476 PTZ00184 calmodulin; Provision 99.0 3E-09 6.6E-14 92.1 10.7 102 382-483 11-115 (149)
477 PF06293 Kdo: Lipopolysacchari 99.0 1.5E-08 3.2E-13 93.0 14.2 112 172-283 55-172 (206)
478 KOG0028 Ca2+-binding protein ( 99.0 3.7E-09 8E-14 88.1 8.9 101 382-482 33-136 (172)
479 COG5126 FRQ1 Ca2+-binding prot 98.9 6.4E-09 1.4E-13 88.8 10.3 101 382-483 20-123 (160)
480 smart00027 EH Eps15 homology d 98.9 4.7E-09 1E-13 83.6 8.6 72 339-412 3-74 (96)
481 KOG3741 Poly(A) ribonuclease s 98.9 3.1E-07 6.8E-12 91.3 22.7 140 140-286 288-447 (655)
482 PF13833 EF-hand_8: EF-hand do 98.9 4.6E-09 1E-13 74.0 6.9 50 431-480 1-53 (54)
483 cd00252 SPARC_EC SPARC_EC; ext 98.9 2.5E-09 5.4E-14 87.3 6.2 63 416-480 46-108 (116)
484 KOG1243 Protein kinase [Genera 98.9 1.2E-07 2.7E-12 97.1 18.5 170 130-313 15-199 (690)
485 cd05031 S-100A10_like S-100A10 98.9 1.2E-08 2.7E-13 80.8 9.1 69 344-412 6-81 (94)
486 smart00750 KIND kinase non-cat 98.9 2.8E-08 6.2E-13 88.6 12.5 95 214-319 1-106 (176)
487 cd00213 S-100 S-100: S-100 dom 98.9 5.5E-09 1.2E-13 81.8 6.9 65 417-481 7-80 (88)
488 COG0478 RIO-like serine/threon 98.9 1.8E-08 3.9E-13 92.9 10.7 140 130-282 93-252 (304)
489 cd05026 S-100Z S-100Z: S-100Z 98.8 1.4E-08 3.1E-13 80.1 8.4 69 343-411 7-82 (93)
490 PLN02964 phosphatidylserine de 98.8 8.4E-09 1.8E-13 107.5 9.0 97 382-481 143-244 (644)
491 cd05029 S-100A6 S-100A6: S-100 98.8 2.2E-08 4.8E-13 77.9 8.3 70 342-411 6-80 (88)
492 cd05025 S-100A1 S-100A1: S-100 98.8 2.3E-08 5E-13 79.0 8.5 68 344-411 7-81 (92)
493 cd00213 S-100 S-100: S-100 dom 98.8 2.9E-08 6.3E-13 77.7 7.9 70 342-411 4-80 (88)
494 cd00052 EH Eps15 homology doma 98.8 2.2E-08 4.7E-13 74.0 6.8 61 349-411 2-62 (67)
495 KOG0040 Ca2+-binding actin-bun 98.7 8.8E-08 1.9E-12 103.6 12.2 135 339-479 2246-2397(2399)
496 KOG2562 Protein phosphatase 2 98.7 9.4E-08 2E-12 93.0 11.2 134 340-476 272-420 (493)
497 PF13833 EF-hand_8: EF-hand do 98.7 3.8E-08 8.3E-13 69.2 6.1 51 359-409 1-52 (54)
498 KOG1023 Natriuretic peptide re 98.7 2E-08 4.3E-13 101.5 6.0 97 183-283 2-100 (484)
499 cd05023 S-100A11 S-100A11: S-1 98.7 1.1E-07 2.3E-12 74.1 8.6 70 342-411 5-81 (89)
500 cd00051 EFh EF-hand, calcium b 98.7 6.5E-08 1.4E-12 69.7 6.6 59 420-478 2-62 (63)
No 1
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-41 Score=318.02 Aligned_cols=226 Identities=31% Similarity=0.453 Sum_probs=185.3
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE----EDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.++..... .....+.+|++||++| +|||||+++++|..
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeec
Confidence 356779999999999999999999999999999999988765431 1234568999999999 89999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+..||||||++||+|++.+..++.+.+...+.+++|++.|+.|||++||+||||||+|||+.++.++..+||+|||+|+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887788999999999999
Q ss_pred ccCCCCceee------------------------------------eeeccCCCCcchhHH-HHHHHhcccccCCCCCCC
Q 040003 281 FFRPGLTFRV------------------------------------WLRLHFLFFQKQRQS-VLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 281 ~~~~~~~~~~------------------------------------~~~~~ypf~~~~~~~-~~~~i~~~~~~~~~~~~~ 323 (489)
+...+..+.. .|++.-||....... +.+.|+.|+|.|....|
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w- 406 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW- 406 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh-
Confidence 8754332211 233333666544333 66666777777766666
Q ss_pred CCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 324 DKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..++.+.++.+. .++-.|++.|.+.+|..
T Consensus 407 --------------~~Iseea~dlI~---~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 407 --------------DRISEEALDLIN---WMLVVDPENRPSADEAL 435 (475)
T ss_pred --------------hhhhHHHHHHHH---HhhEeCcccCcCHHHHh
Confidence 235555555555 45788999999999864
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-40 Score=326.99 Aligned_cols=236 Identities=28% Similarity=0.352 Sum_probs=200.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|..++.||+|||+.||.+++..+|+.||+|+|.++.+......+.+.+||+|.++| +|||||+++++|++..++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEE
Confidence 4599999999999999999999999999999999998888888999999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
+|+|..++|..++++++.++|.+++.+++||+.||.|||+++|||||||..|++| +++.+|||+|||||..+.....
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999989999999999999999999999999999999999999999 7888999999999999975432
Q ss_pred --eeeeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 --FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 --~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
++..++..| .-+-|+.+++++.++.|+++|......+...--+...+.++..++.+..+-|+
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~--- 250 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIR--- 250 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHH---
Confidence 222333333 44456778999999999988876532221111223345556677777777776
Q ss_pred hhhcCCCCCCccHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKK 370 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~ 370 (489)
+.++.|+.-|++++++..
T Consensus 251 ~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHhcCCcccCCCHHHHhc
Confidence 558999999999999753
No 3
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-40 Score=310.84 Aligned_cols=161 Identities=35% Similarity=0.599 Sum_probs=147.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
....|.+.++||+|+||+||+|+++.++..||||.|.++++ ....++.+..||.||+.| +|||||++++++.+.+.+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEE
Confidence 34569999999999999999999999999999999988765 566778899999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC---CCeEEEeecccccc
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE---APLKTIDFGLSMFF 282 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~---~~~kl~DFGla~~~ 282 (489)
||||||.||+|.+++..++.+++..++.++.||+.||++||+++||||||||.||||...... ..+||+|||+|+.+
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999764223 67999999999999
Q ss_pred CCCCce
Q 040003 283 RPGLTF 288 (489)
Q Consensus 283 ~~~~~~ 288 (489)
.++...
T Consensus 166 ~~~~~a 171 (429)
T KOG0595|consen 166 QPGSMA 171 (429)
T ss_pred CchhHH
Confidence 866543
No 4
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=305.76 Aligned_cols=154 Identities=35% Similarity=0.610 Sum_probs=146.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.+|..++.||+|+|++|++|+++.+++.||||++.++.+..+..+.-+.+|-.+|.+|.+||.||+||..|+|...+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 35999999999999999999999999999999999888777777788899999999998999999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||+++|+|.++|.+.|.|++..++.++.+|+.||+|||++|||||||||+|||| +.++++||+|||.|+.+.+
T Consensus 153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCCh
Confidence 9999999999999999999999999999999999999999999999999999999 8899999999999998754
No 5
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.9e-39 Score=290.31 Aligned_cols=187 Identities=22% Similarity=0.378 Sum_probs=160.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.+.++|+|+||+||+|+++.||+.||||++.... .++.-.+-.+|||++|++| +|+|+|.+++.|.....++||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEEE
Confidence 45888999999999999999999999999999986432 2344445578999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC-CC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR-PG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~-~~ 285 (489)
+|||+.. +.+.|.+ ...++...+..++.|++.|+.|||++++|||||||+|||+ ...+.+||||||+|+.+. ++
T Consensus 80 FE~~dhT-vL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 80 FEYCDHT-VLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eeecchH-HHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCCc
Confidence 9999874 4455544 3568999999999999999999999999999999999999 778899999999999998 77
Q ss_pred Cceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 286 LTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 286 ~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.++. +.+++| |.+.+..+|++.+++.|+.-+|++
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~ 205 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR 205 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc
Confidence 76665 444444 667777899999999999888864
No 6
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=299.53 Aligned_cols=193 Identities=36% Similarity=0.549 Sum_probs=167.5
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.+.+|++.+.||+|+||+|-+|+....|+.||||.|++.++.+++++-.+++||+||..| +||||+.+|+.|+..+.
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDK 127 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCce
Confidence 35566799999999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+.|||||..+|.|+||+.+++.+++.+++.+++||+.|+.|||.++|+|||||.+|||| |.++++||+||||+..|.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 888999999999999887
Q ss_pred CCCceee-----------eeeccCCCCc-----chhHHHHHHHhcccccCCCCC
Q 040003 284 PGLTFRV-----------WLRLHFLFFQ-----KQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 284 ~~~~~~~-----------~~~~~ypf~~-----~~~~~~~~~i~~~~~~~~~~~ 321 (489)
.+..+.. +..+ -||.| ++.+.+++.++.|..+|++.+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG-~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D 257 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNG-TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD 257 (668)
T ss_pred cccHHHHhcCCcccCCccccCC-CCCCCCccchhhHHHHHHHHhhcccccCCch
Confidence 6654332 1111 13332 344555566666666665543
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-38 Score=293.34 Aligned_cols=188 Identities=26% Similarity=0.397 Sum_probs=168.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||.++.+.|++.||+|+++++.+....+......|..||.++ +||.||.++..|++...+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEE
Confidence 4599999999999999999999999999999999999888888889999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC-
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL- 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~- 286 (489)
+||+.||+|+.+|.+.+.+++..++.++..|+.||.|||++|||||||||+|||| +.+|+++|+|||||+......
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999 889999999999999665432
Q ss_pred -ceeeeeeccC---------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 287 -TFRVWLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 287 -~~~~~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+.+..++..| .|| +.+.++++++.|..+|..+.
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWW--sLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWW--SLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchH--hHHHHHHHHhhCCCCCcCcc
Confidence 2222333333 454 44888899999988887654
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-37 Score=298.47 Aligned_cols=188 Identities=24% Similarity=0.369 Sum_probs=159.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.+.|+.+++||+|+||.||+|++..+|+.||+|+++.... .+....-..|||.||++| +|||||+|.+...+. ..+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceE
Confidence 4569999999999999999999999999999999986543 234456678999999999 899999999988776 789
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+|||++ +|.-++... -+|++.++.++++||+.||+|||.+||+|||||.+|||| +.+|.+||+|||||+++.
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeecc
Confidence 999999987 787777653 379999999999999999999999999999999999999 888999999999999887
Q ss_pred CCCc--ee-eeeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLT--FR-VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~--~~-~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... ++ .|.+.+| -.+.++-+||+.+++.|++-+++.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~ 323 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR 323 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc
Confidence 6542 22 2555555 334456699999999998888763
No 9
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-39 Score=283.94 Aligned_cols=224 Identities=30% Similarity=0.543 Sum_probs=195.7
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++.+.||+|.|+.||++.+..+|+.+|+|+|..+++... ..+.+.+|++|.+.| +|||||++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-QHPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhc-CCCcEeehhhhhccccee
Confidence 355779999999999999999999999999999999987766544 778999999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+|+|.|++|..-+..+--++|..+..+++||+.+|.|||.+||||||+||+|+||...+....+||+|||+|..+..
T Consensus 86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 99999999999998888887899999999999999999999999999999999999999888888999999999998875
Q ss_pred CCceee---------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCC
Q 040003 285 GLTFRV---------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPI 331 (489)
Q Consensus 285 ~~~~~~---------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 331 (489)
+..... +|.+.-|||+.+...+++.|+.|.|++++..|+.
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~------- 238 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDT------- 238 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCc-------
Confidence 543322 1233339999999999999999999999999965
Q ss_pred cchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHH
Q 040003 332 GDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEEL 368 (489)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el 368 (489)
++++....++ +++..|+..+|+..|-
T Consensus 239 --------is~~Ak~Lvr---rML~~dP~kRIta~EA 264 (355)
T KOG0033|consen 239 --------VTPEAKSLIR---RMLTVNPKKRITADEA 264 (355)
T ss_pred --------CCHHHHHHHH---HHhccChhhhccHHHH
Confidence 4455444555 4578899999999873
No 10
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.9e-37 Score=275.11 Aligned_cols=233 Identities=24% Similarity=0.368 Sum_probs=183.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.+|...++||+|.||+||+|++..||+.||||+|+.....+.-. ....|||.+|+.+ +|+||+.++++|.....+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~-~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGIN-RTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCcc-HHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEE
Confidence 35888999999999999999999999999999998765443323 3567899999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
+|||+. +|...++.. ..++..++..|+.+++.||+|||++.|+||||||.|+|+ +.+|.+||+|||+|+.+.+..
T Consensus 80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence 999964 898888665 358999999999999999999999999999999999999 778999999999999997544
Q ss_pred cee--eeeeccC--------------CCCcchhHHHHHHHhcccccCCC-------------------CCCCCCCCCC--
Q 040003 287 TFR--VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPG-------------------SLWPDKVAVP-- 329 (489)
Q Consensus 287 ~~~--~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~-------------------~~~~~~~~~~-- 329 (489)
... .+.+++| ..+.++.+||+.+++.+.+-||+ +.||+-..+.
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 322 2555555 44556779999999999888886 3555543221
Q ss_pred -------CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 330 -------PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 330 -------~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.....+....+.+.++-+. +++..|+..+|+..|..
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~---~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLS---KMLTYNPKKRITASQAL 279 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHH---hhhccCchhcccHHHHh
Confidence 11112122233444454444 45677888899888864
No 11
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-37 Score=279.45 Aligned_cols=189 Identities=28% Similarity=0.487 Sum_probs=170.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.++.||.|+||+|.+++++.+|..||+|++.+..+..-.+.+...+|..+|+.+ .||+++++++.|.+..++|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEE
Confidence 4599999999999999999999999999999999998888888889999999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||++||.|+.++++.+++++..++.++.+|+.||+|||+++||+|||||+|||| |.+|.+||+|||+|+..... +
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r-T 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR-T 198 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc-E
Confidence 9999999999999999999999999999999999999999999999999999999 88999999999999988654 5
Q ss_pred eeeeeeccC--------------------------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 288 FRVWLRLHF--------------------------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 288 ~~~~~~~~y--------------------------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
++..++..| ||.+.+...++..|+.|++.||...
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f 264 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF 264 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc
Confidence 544222222 7777777777888888888887654
No 12
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=280.74 Aligned_cols=233 Identities=21% Similarity=0.230 Sum_probs=182.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 207 (489)
..+.+..||+|..|+||+|+|+.|++.+|+|+|.. ..++...+++.+|++|++++ +||+||.+||+|...+ .++|+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 46667899999999999999999999999999943 24567778999999999999 8999999999999999 59999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.||+|.+.+...++++|.....++.++++||.|||+ ++||||||||+|||+ +..|.|||||||.++.+....
T Consensus 157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS~ 233 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNSI 233 (364)
T ss_pred hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhhh
Confidence 9999999999999988999999999999999999999995 999999999999999 678899999999999987765
Q ss_pred ceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCCC--CCCCCCC-CCCCc---chhhhh-hccHHHHH
Q 040003 287 TFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS--LWPDKVA-VPPIG---DRVIAE-SLSEEEIA 346 (489)
Q Consensus 287 ~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~-~~~~~---~~~~~~-~~~~~~~~ 346 (489)
..+.+++..| .-+-|+.+..+-++..|+|+++.. .|.+... +..++ -...+. .++++-..
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRS 313 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence 5555555555 122245577778888888888764 2221110 00000 001111 24444333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+. .|+.+|++.|-+..||..
T Consensus 314 FV~---~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 314 FVS---CCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHH---HHhcCCcccCCCHHHHhc
Confidence 333 567888888888888753
No 13
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=296.08 Aligned_cols=229 Identities=45% Similarity=0.761 Sum_probs=195.5
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
...+.+.|++.+.||+|.||+||+|+++.+|+.+|+|++.+.........+.+.+|++||++|..|||||.+++.|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 34556779999999999999999999999999999999998887766677899999999999966999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla~~ 281 (489)
.+|+|||+|.||.|++.+... .+++..+..+++|++.++.|||+.||+||||||+|+|+..... .+.+|++|||+|.+
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999999887 4999999999999999999999999999999999999976544 45899999999999
Q ss_pred cCCCCceee---------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCC
Q 040003 282 FRPGLTFRV---------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAV 328 (489)
Q Consensus 282 ~~~~~~~~~---------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 328 (489)
+..+..+.. ++.+.-|||+.+...++..|+.|++.|+...|+..
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~i--- 265 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDI--- 265 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcccc---
Confidence 987544433 12222299999999999999999999999999763
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+..-.+-++ .++..|+..|++..+..+
T Consensus 266 ------------s~~akd~i~---~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 266 ------------SESAKDFIR---KLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ------------CHHHHHHHH---HhcccCcccCCCHHHHhc
Confidence 222222233 446778888998888654
No 14
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=295.60 Aligned_cols=236 Identities=24% Similarity=0.359 Sum_probs=185.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AV 204 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~ 204 (489)
+.++|.++++||.|+||.||+|+.+.++..||||.++++.. .-++... +||+..|++|..|||||++.+.+.+.+ .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 34679999999999999999999999999999999976543 3333333 589999999944999999999999888 99
Q ss_pred EEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||+. +|+++++.++ .|++..++.|+.||++||+|+|.+|+.||||||+|||+ .....|||+|||+||.+.
T Consensus 86 ~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEecccccccccc
Confidence 999999965 9999998764 59999999999999999999999999999999999999 446679999999999998
Q ss_pred CCCceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCC-------------------CCCCCCC--
Q 040003 284 PGLTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS-------------------LWPDKVA-- 327 (489)
Q Consensus 284 ~~~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~-- 327 (489)
...-++. |.+++| |.+.+..+|++.+|..-+.-||+. .|+....
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La 241 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA 241 (538)
T ss_pred cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence 7666655 444444 777777899999999888888863 2322110
Q ss_pred ---------CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 328 ---------VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 328 ---------~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+......+..+.+.+-+.-+. +++-.|++.|.++.+..+
T Consensus 242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~---~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIE---RLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHhccCCCcCCCCChHHhCcccCHHHHHHHH---HHhcCCCccCccHHHHhc
Confidence 0111111122224444444444 567788899999998754
No 15
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-36 Score=299.44 Aligned_cols=236 Identities=31% Similarity=0.444 Sum_probs=192.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.-|++++.||.|+-|.|-+|++..||+.+|||+|.+...........+.+||.||+-| .||||+++|+.|++..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEEE
Confidence 3499999999999999999999999999999999887444455567889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
+||++||.|++++..+|.+++.+++.+++||+.|+.|||..+|+||||||+|+|| +..++|||+|||+|..-.++.-
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 7777899999999998776654
Q ss_pred eee-eeeccC---------CCCc-----chhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 FRV-WLRLHF---------LFFQ-----KQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 ~~~-~~~~~y---------pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
+.. .+..+| ||+| |+=+.|+..++.|.++|.++.-...-.--+.+..-++..++.+..+.|+
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr--- 244 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLR--- 244 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHH---
Confidence 433 233333 3333 2336788888888888875432100000112223445667777777776
Q ss_pred hhhcCCCCCCccHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKK 370 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~ 370 (489)
+++|+|+..+|+.+|+..
T Consensus 245 ~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 245 RMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHhccCccccccHHHHhh
Confidence 668999999999999865
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=293.01 Aligned_cols=237 Identities=33% Similarity=0.486 Sum_probs=183.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH--HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE--EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...|.+++.||+|+||+|++|++..+++.||+|++.++..... ...+.+.+|+.+++.+..||||+++++++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 3469999999999999999999999999999998876533211 34456779999999994499999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGla~~~~ 283 (489)
|+|||||.||+|++++...+++.|..++.+++|++.|++|||++||+||||||+|||+ +.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEeccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999 555 899999999999883
Q ss_pred -CCCceee-----------eeec-c-C---CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhc-cHHHH
Q 040003 284 -PGLTFRV-----------WLRL-H-F---LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESL-SEEEI 345 (489)
Q Consensus 284 -~~~~~~~-----------~~~~-~-y---pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 345 (489)
.+..... ++.+ . | +-+-++-+.++..++.|.++|.+..-+............++..+ +.+-.
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~ 252 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEAR 252 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHH
Confidence 3332222 2222 2 3 22234557788888888888876321110000011122233344 55555
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..++ ++++.|+..++++.|+.
T Consensus 253 ~Li~---~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 253 SLIE---KMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHH---HHcCCCcccCCCHHHHh
Confidence 5555 56889999999999986
No 17
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=273.60 Aligned_cols=187 Identities=21% Similarity=0.286 Sum_probs=157.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 205 (489)
+.|+.+.+|++|+||.||+|+++.|++.||+|+++...-.. ..--.-+|||.+|.++ +|||||.+-++... -+.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKA-RHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccceee
Confidence 45999999999999999999999999999999997654221 1122456899999999 79999999888754 45799
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||||+. +|..++...+ +|...+++.++.|++.|++|||.+.|+|||||++|+|+ ...|.+||+|||||+.+..
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYGS 229 (419)
T ss_pred eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhhcC
Confidence 99999976 8888776654 89999999999999999999999999999999999999 6788999999999999976
Q ss_pred CCc-eee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 285 GLT-FRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~-~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ++. +.+.+| +.+.++.+||+.+++.+++-|++.
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 632 222 444444 788888999999999999999875
No 18
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=277.99 Aligned_cols=219 Identities=29% Similarity=0.458 Sum_probs=170.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----------HHHHHHHHHHHHHHHhcCCCCeeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----------EDVEDVRREIRIMHHLAGHPNVIQIVG 196 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----------~~~~~~~~E~~~l~~l~~hpniv~~~~ 196 (489)
+.|++++.||+|.||+|-+|++..+++.||||++.+..+... ...+++++||.||++| .|||||+|++
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~LiE 175 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLIE 175 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEEE
Confidence 469999999999999999999999999999999987544221 1246889999999999 8999999999
Q ss_pred EEEe--CCeEEEEEeecCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 197 AYED--AVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 197 ~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
+..+ ...+|||+|||..|.+... -..+. +.+.+++.+++.++.||+|||.+|||||||||+|+|| +.++++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~-p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWC-PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccC-CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcEEe
Confidence 9876 4689999999999887432 22234 8899999999999999999999999999999999999 77799999
Q ss_pred EeeccccccCCCCceee-------------------------------------------eeeccCCCCcchhHHHHHHH
Q 040003 274 IDFGLSMFFRPGLTFRV-------------------------------------------WLRLHFLFFQKQRQSVLQTR 310 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~-------------------------------------------~~~~~ypf~~~~~~~~~~~i 310 (489)
+|||.+..+..+..... ++-+.+||.+....+++..|
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 99999987743321110 22344477777666777777
Q ss_pred hcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHH
Q 040003 311 LVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKG 371 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~ 371 (489)
+...+.||... .+.++-.+.|. +++++|+..+|++.+++.-
T Consensus 332 vn~pL~fP~~p-----------------e~~e~~kDli~---~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 332 VNDPLEFPENP-----------------EINEDLKDLIK---RLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred hcCcccCCCcc-----------------cccHHHHHHHH---HHhhcChhheeehhhheec
Confidence 76666666431 12222233333 5688999999999998753
No 19
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=286.18 Aligned_cols=152 Identities=29% Similarity=0.446 Sum_probs=143.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+||+|++|..+.+++.||||++++..+-..++++..+.|.+|+....+||.+++++.+|+...++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 56999999999999999999999999999999999998888899999999999999997899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.||++. ++...+.+++..++.++..|+.||+|||++||||||||.+|||| |.+|++||+|||+++.-.
T Consensus 448 mey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 448 MEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccC
Confidence 9999999954 34555789999999999999999999999999999999999999 899999999999998654
No 20
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-36 Score=273.70 Aligned_cols=158 Identities=29% Similarity=0.492 Sum_probs=140.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEE-EEEeCCe-EE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVG-AYEDAVA-VH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~-~~ 205 (489)
..|++.++||+|+||+||++.+..+|+.+|.|.|.-. .-+....+.+..|+.+|++| +|||||++++ .|.+... ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhH
Confidence 4599999999999999999999999999999999743 34567788899999999999 8999999998 5655555 99
Q ss_pred EEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 206 VVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHS--LG--VMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~--~~--iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
||||||.+|+|...++. +..+++..++.++.|++.||..||+ .+ |+||||||+||+| +..|.+||+|||
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfG 173 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFG 173 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccch
Confidence 99999999999998864 3569999999999999999999999 55 9999999999999 788999999999
Q ss_pred cccccCCCCceee
Q 040003 278 LSMFFRPGLTFRV 290 (489)
Q Consensus 278 la~~~~~~~~~~~ 290 (489)
|++++....++..
T Consensus 174 L~r~l~s~~tfA~ 186 (375)
T KOG0591|consen 174 LGRFLSSKTTFAH 186 (375)
T ss_pred hHhHhcchhHHHH
Confidence 9999987666543
No 21
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.2e-35 Score=284.05 Aligned_cols=152 Identities=30% Similarity=0.492 Sum_probs=145.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||.||+|+.+.||..||+|++++.......+++.++.|-.||... ++|+||+||..|++..++||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEE
Confidence 46799999999999999999999999999999999998888888889999999999996 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||++||++..+|.+.+.+++..++.++.+++.|++.+|.+|+|||||||+|+|| |..|++||+|||||.-+
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999999643
No 22
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-35 Score=264.31 Aligned_cols=221 Identities=29% Similarity=0.455 Sum_probs=187.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC-----CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL-----TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~-----~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
-+.|.-.+.||+|..++|.+|.++.+|+.+|+|+|..... ...+-++.-++|+.||+++.+||+|+.+.++|+..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3458888899999999999999999999999999864321 12334566789999999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+++|+|+|+.|.|+|+|...-.+++...+.+++|++.|++|||.++||||||||+|||+ +++.++||+|||+|..
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFACQ 172 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceeec
Confidence 9999999999999999999988889999999999999999999999999999999999999 7788999999999999
Q ss_pred cCCCCceee---------------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 282 FRPGLTFRV---------------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 282 ~~~~~~~~~---------------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
+.+|..++. +|.|.-|||..-.-..+..|+.|+|.|.+..|
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence 988876544 12222299999888888999999999999999
Q ss_pred CCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHH
Q 040003 323 PDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEEL 368 (489)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el 368 (489)
.+. +.+..+.+. +++-.|+..+|+.+|.
T Consensus 253 adi---------------s~~~KdLIs---rlLqVdp~~Ritake~ 280 (411)
T KOG0599|consen 253 ADI---------------SATVKDLIS---RLLQVDPTKRITAKEA 280 (411)
T ss_pred hhc---------------cccHHHHHH---HHHeeCchhcccHHHH
Confidence 663 222222232 3466788889999884
No 23
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=261.54 Aligned_cols=221 Identities=32% Similarity=0.541 Sum_probs=178.8
Q ss_pred cCcccceeec-ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--
Q 040003 124 GNLKEMYSLG-RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-- 200 (489)
Q Consensus 124 ~~~~~~y~~~-~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 200 (489)
..+.+.|.+. ++||-|-.|.|..|.++.|++.+|+|++.- ....++|+++.-..+.|||||.+++.|+.
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~ 128 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENSY 128 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence 3455668775 679999999999999999999999998842 25667899887777789999999998854
Q ss_pred --CCeEEEEEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 201 --AVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 201 --~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
...+.||||+|+||.|+..+..++. |+|.++..|++||..|+.|||+.+|.||||||+|+|..+...+..+||+||
T Consensus 129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccc
Confidence 5678899999999999999998876 999999999999999999999999999999999999998888999999999
Q ss_pred ccccccCCCCceee--------------------------------eeeccC-CCCcchh----HHHHHHHhcccccCCC
Q 040003 277 GLSMFFRPGLTFRV--------------------------------WLRLHF-LFFQKQR----QSVLQTRLVRNLNEPG 319 (489)
Q Consensus 277 Gla~~~~~~~~~~~--------------------------------~~~~~y-pf~~~~~----~~~~~~i~~~~~~~~~ 319 (489)
|+|+.-.....+.. ++-.+| ||+...- -..-.+|..|.|.||.
T Consensus 209 GFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~ 288 (400)
T KOG0604|consen 209 GFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPE 288 (400)
T ss_pred ccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCC
Confidence 99986542221111 233334 6765422 2456788889999999
Q ss_pred CCCCCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 320 SLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.|. +++++..+.++. .+-.++..+++++|+..
T Consensus 289 pEWs---------------~VSe~aKdlIR~---LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 289 PEWS---------------CVSEAAKDLIRK---LLKTEPTERLTIEEVMD 321 (400)
T ss_pred hhHh---------------HHHHHHHHHHHH---HhcCCchhheeHHHhhc
Confidence 9884 456666666663 46789999999999864
No 24
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-34 Score=255.72 Aligned_cols=159 Identities=31% Similarity=0.570 Sum_probs=144.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++++.||+|.||.||+|+.+.++-.||+|++-+..+.......++++|++|-+.| +||||.++|++|.+....||+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEEE
Confidence 5699999999999999999999999999999999887766555567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRII--QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||..+|+|+..|. ..+++++..+..++.|++.||.|||.++||||||||+|+|+ +..+.+||+|||-+..-..+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecCCC
Confidence 99999999999998 55679999999999999999999999999999999999999 77788999999999877655
Q ss_pred Cceee
Q 040003 286 LTFRV 290 (489)
Q Consensus 286 ~~~~~ 290 (489)
...+.
T Consensus 178 kR~tl 182 (281)
T KOG0580|consen 178 KRKTL 182 (281)
T ss_pred Cceee
Confidence 44433
No 25
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=264.02 Aligned_cols=203 Identities=26% Similarity=0.351 Sum_probs=167.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC-eeEEEEEEEeCC----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN-VIQIVGAYEDAV---- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~---- 202 (489)
..|..+++||+|+||+||+|+.+.+|+.||+|+++..... +..-....+|+.+|+.| +|+| ||.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccccc
Confidence 3488888999999999999999999999999999765321 11224567999999999 7999 999999998877
Q ss_pred --eEEEEEeecCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 --AVHVVMELCAGGELFDRIIQRG----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+++|+||+. .+|..++.... .++...++.+++||+.||.|||++||+||||||.|||+ +..|.+||+||
T Consensus 89 ~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeecc
Confidence 8999999995 59999987654 47778999999999999999999999999999999999 67899999999
Q ss_pred ccccccC-CCCceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhc
Q 040003 277 GLSMFFR-PGLTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~-~~~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (489)
|+|+.+. +...++. |.+..| +.+.++.+||+.++..++.-|+++.
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s------------------- 225 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS------------------- 225 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc-------------------
Confidence 9999887 3333332 555544 5666788999999999888888653
Q ss_pred cHHHHHHHHHHHhhhcCC
Q 040003 341 SEEEIAGLKEMFKMIDTD 358 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d 358 (489)
+.+++..+|+.+..-
T Consensus 226 ---e~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 226 ---EIDQLFRIFRLLGTP 240 (323)
T ss_pred ---HHHHHHHHHHHcCCC
Confidence 266677777777554
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7e-34 Score=277.32 Aligned_cols=231 Identities=24% Similarity=0.357 Sum_probs=180.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+.+.||+|+||+||+|+.+.+.+.||||.+.+.. ..+.++..+++|++|+++| +|||||.++++|+...++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEE
Confidence 45888999999999999999999999999999998765 4567788999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
.|||.| +|+.+|...+.++|..++.+..+++.||.|||+++|+|||+||.|||| +..+.+|+||||+|+....+..
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence 999987 999999999999999999999999999999999999999999999999 8889999999999998876544
Q ss_pred eeeeeec--cC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHH
Q 040003 288 FRVWLRL--HF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 288 ~~~~~~~--~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
...-..| -| ||.. ++.+|+++++..|+++|-........ .++..... +...+..-+..+.
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~--p~~~S~~f~nfl~- 232 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKP--PSTASSSFVNFLQ- 232 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCC--cccccHHHHHHHH-
Confidence 3221111 12 4433 45688999999888887543211100 00000000 0123333333333
Q ss_pred HHhhhcCCCCCCccHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~ 369 (489)
..+..|+..+|+..+|.
T Consensus 233 --gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 233 --GLLIKDPAQRLTWTDLL 249 (808)
T ss_pred --HHhhcChhhcccHHHHh
Confidence 34567777888887764
No 27
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=261.96 Aligned_cols=192 Identities=25% Similarity=0.367 Sum_probs=161.9
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED---- 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 200 (489)
.....|...+.||+|+||.|+.|.++.+|+.||||++.. .+...-..++..||+.+|+++ +|+|||.+++.+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRD 96 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHh-cCCCcceEEeeccccccc
Confidence 344557778999999999999999999999999999863 345566778899999999999 79999999998855
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
-..+|+|+|+| +.+|...++....+++..+..++.||+.||+|+|+.+|+||||||+|+|+ +.++.+||||||+|
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLA 172 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccce
Confidence 45799999999 56888887776669999999999999999999999999999999999999 77888999999999
Q ss_pred cccCC---CCc-eeeeeeccC--------------CCCcchhHHHHHHHhcccccCCCCCC
Q 040003 280 MFFRP---GLT-FRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 280 ~~~~~---~~~-~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
+.... ... ...+.+++| -.+.++.+||+.+++.|+.-||+...
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~ 233 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY 233 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch
Confidence 99863 222 222555665 33456679999999999999998653
No 28
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-32 Score=266.97 Aligned_cols=186 Identities=26% Similarity=0.424 Sum_probs=154.9
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.++....|....+||+|+.|.||.|+...+++.||||.+..+... ..+-+.+|+.+|+.+ +|+|||.+++.|...+
T Consensus 268 ~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~d 343 (550)
T KOG0578|consen 268 QGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDL-HHPNIVNFLDSYLVGD 343 (550)
T ss_pred CCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhc-cchHHHHHHHHhcccc
Confidence 355667799999999999999999999999999999999876433 346788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|||||+||+|.|.+.. ..++|.+++.+++.+++||+|||.+||||||||.+|||+ +.++.+||+|||++..+
T Consensus 344 eLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi 419 (550)
T KOG0578|consen 344 ELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQI 419 (550)
T ss_pred eeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeecc
Confidence 99999999999999987654 469999999999999999999999999999999999999 77888999999999999
Q ss_pred CCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 283 RPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 283 ~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
......+..+. +.|||...+ .+.+..|.+..++|
T Consensus 420 ~~~~~KR~TmV-GTPYWMAPE-----Vvtrk~YG~KVDIW 453 (550)
T KOG0578|consen 420 SEEQSKRSTMV-GTPYWMAPE-----VVTRKPYGPKVDIW 453 (550)
T ss_pred ccccCcccccc-CCCCccchh-----hhhhcccCccccch
Confidence 87665443222 236666522 22334455555555
No 29
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-31 Score=259.32 Aligned_cols=280 Identities=25% Similarity=0.349 Sum_probs=210.5
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+...|.+.+.||+|.|.+|-+|++..||..||||+|.+.++.. .....+.+|+++|+-+ +|||||+||+......
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLV-QHpNiVRLYEViDTQT 90 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLV-QHPNIVRLYEVIDTQT 90 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHh-cCcCeeeeeehhcccc
Confidence 4556677999999999999999999999999999999999877644 3445678899999998 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
.+|||+|+-.+|+|+++|.++ ..+.+..++.++.||+.|+.|||...||||||||+|+++. ..-|-|||.|||++..
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNK 168 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeecccccc
Confidence 999999999999999999876 4689999999999999999999999999999999999885 4568899999999999
Q ss_pred cCCCCceee------------eeeccC--C-CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHH
Q 040003 282 FRPGLTFRV------------WLRLHF--L-FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 282 ~~~~~~~~~------------~~~~~y--p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (489)
|.+|..++. +|...| | .+.|+.+.|++.++.|+.+|....-.+.-..-...++.++..++.+-.+
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrd 248 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRD 248 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHH
Confidence 999987665 333345 2 3335667888888888888864321111111112234555566666555
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH--HHHHhCC------------CCCHHHH---------------HHHHHccCCCCCc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK--GLQRVGA------------NLMDSEI---------------DGLMQAGDIDNSG 397 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~--~l~~lg~------------~~~~~~i---------------~~l~~~~D~d~~g 397 (489)
.|. .++-.|+..+-+++|+.. ||+.... .+.+++- +++++.++.|.-.
T Consensus 249 LI~---sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iPLvsr~~L~ee~Ha~IIq~Mv~G~IAs~e~Il~aLe~n~YN 325 (864)
T KOG4717|consen 249 LIQ---SMLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIPLVSRHHLPEEAHATIIQQMVAGAIASEEDILRALENNEYN 325 (864)
T ss_pred HHH---HHHhcCchhhccHHHHhccccccCCCCCccccCceeehhhCChHHHHHHHHHHhcccccCHHHHHHHHhccccc
Confidence 554 456677778888888752 4433211 1112111 3355566677777
Q ss_pred ceehHHHHHHHH
Q 040003 398 TMDYGEFIAAML 409 (489)
Q Consensus 398 ~I~f~eF~~~~~ 409 (489)
.|+-.-|+.+-.
T Consensus 326 hiTATYfLLAEr 337 (864)
T KOG4717|consen 326 HITATYFLLAER 337 (864)
T ss_pred hhhhHHHHHHHH
Confidence 777777765544
No 30
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-32 Score=254.54 Aligned_cols=182 Identities=25% Similarity=0.337 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----Ce
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-----VA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~~ 203 (489)
.|.-.+++|.|+||.||+|....+++.||||.+-..+.. -.+|+++|+.+ +|||||++.-+|... -.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhH
Confidence 488889999999999999999999999999988544321 23799999998 899999999888543 24
Q ss_pred EEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 204 VHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|||||+. +|...++. +.+++...++-++.||+.||.|||+.||+||||||.|+|++ ...+.+||||||.|
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcc
Confidence 5689999975 89888874 46789999999999999999999999999999999999994 34589999999999
Q ss_pred cccCCCCceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+.+..+..-.. +.++-| -.+-|+.+|++.+++.|.+-|+++.
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s 230 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS 230 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC
Confidence 99977664333 333333 2334566999999999999999864
No 31
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-33 Score=253.80 Aligned_cols=157 Identities=34% Similarity=0.588 Sum_probs=143.9
Q ss_pred ccCcccceee-cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 123 TGNLKEMYSL-GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 123 ~~~~~~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.+.+.|++ .+.||+|+|+.|--|....+|.+||||+|.+. ....+.++.||++++.++.+|+||++|+++|+++
T Consensus 72 ~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 72 SGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred cchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3456677877 46799999999999999999999999999875 3456788999999999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+|||||-|.||.|..+|.++..|++.++..+.+.|..||.|||.+||.||||||+|||-...+.-..||||||-|+.-
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999997777778899999988764
Q ss_pred c
Q 040003 282 F 282 (489)
Q Consensus 282 ~ 282 (489)
+
T Consensus 229 ~ 229 (463)
T KOG0607|consen 229 I 229 (463)
T ss_pred c
Confidence 4
No 32
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-32 Score=260.65 Aligned_cols=232 Identities=28% Similarity=0.336 Sum_probs=168.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--eEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--AVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~~~l 206 (489)
.|..++.||+|+||+||++.+..+|..+|||.+.... ....+.+.+|+.+|++| +|||||+++|...... .++|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEe
Confidence 3778899999999999999999999999999987642 12267789999999999 5999999999855544 6999
Q ss_pred EEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla~~~~~ 284 (489)
.|||+.+|+|.+++.+.+ .+++..++.+.+||+.||.|||++|||||||||+|||+ +. ++.+||+|||+++....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCcccccccc
Confidence 999999999999998877 79999999999999999999999999999999999999 55 58899999999987764
Q ss_pred CCce-e-eeeeccCCCCcc-----------------hhHHHHHHHhcccccCCCC-CCCCCC--CCCCCcchhhhhhccH
Q 040003 285 GLTF-R-VWLRLHFLFFQK-----------------QRQSVLQTRLVRNLNEPGS-LWPDKV--AVPPIGDRVIAESLSE 342 (489)
Q Consensus 285 ~~~~-~-~~~~~~ypf~~~-----------------~~~~~~~~i~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~ 342 (489)
.... . .....+.|+|.. +.+|++-+++.|+.++... .+.... .........++..++.
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSD 250 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCH
Confidence 1111 0 000111133332 3344444444443333321 100000 0001112244556666
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+-.+.++ ++|..|+..|.+++||..
T Consensus 251 ~a~~Fl~---~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 251 EAKDFLR---KCFKRDPEKRPTAEELLE 275 (313)
T ss_pred HHHHHHH---HHhhcCcccCcCHHHHhh
Confidence 7666666 456678888999988754
No 33
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-31 Score=254.20 Aligned_cols=233 Identities=24% Similarity=0.339 Sum_probs=181.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||.|..++||+|++..++..||||++...+..+ ++..+++|+..|+.+ +||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEe
Confidence 45999999999999999999999999999999998776543 478999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.||.+|++.+.++.. ..+.|..+..++++++.||.|||.+|.||||||+.|||| +.+|.|||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeeccc
Confidence 9999999999998764 348999999999999999999999999999999999999 88999999999998877654
Q ss_pred Cceeeeee----ccCCCCcchhHHHHHHHhcccccCCCCCCCCCC----------CCCC-------------Ccchhhhh
Q 040003 286 LTFRVWLR----LHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV----------AVPP-------------IGDRVIAE 338 (489)
Q Consensus 286 ~~~~~~~~----~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~-------------~~~~~~~~ 338 (489)
. .+.+.. .+.|+|... +++..-+.| |+|..++|.... -..+ ..-.....
T Consensus 180 G-~R~~~rf~tfvgtp~wmAP--Evl~q~~~G-YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~ 255 (516)
T KOG0582|consen 180 G-DRQVTRFNTFVGTPCWMAP--EVLMQQLHG-YDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS 255 (516)
T ss_pred C-ceeeEeeccccCcccccCh--HHhhhcccC-ccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc
Confidence 3 222222 223787763 443333444 888888884321 0000 00000011
Q ss_pred hccHHHHHHHHHHHh-----hhcCCCCCCccHHHHHH
Q 040003 339 SLSEEEIAGLKEMFK-----MIDTDNSGYITLEELKK 370 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~-----~~D~d~~g~i~~~el~~ 370 (489)
.+..++...+.+.|+ |++.|++.|.+.++|..
T Consensus 256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 334555555444443 67899999999999853
No 34
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.98 E-value=1.7e-31 Score=264.31 Aligned_cols=187 Identities=25% Similarity=0.373 Sum_probs=156.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+|+++ +||||+++++++.+.+.+|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEE
Confidence 4599999999999999999999999999999999765444445567789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCCcc
Confidence 9999999999999888889999999999999999999999999999999999999 6788999999999987644321
Q ss_pred eeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| .-+-++.++++.+++.|..+|..
T Consensus 174 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 174 -TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred -eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 11111111 11123447777788887777654
No 35
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.98 E-value=2e-31 Score=269.08 Aligned_cols=150 Identities=27% Similarity=0.469 Sum_probs=139.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.+ +||||+++++++.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 488999999999999999999999999999999876555556677899999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +..+.+||+|||+++.+
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGF 151 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccc
Confidence 999999999999888889999999999999999999999999999999999999 67789999999998644
No 36
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.98 E-value=8.9e-31 Score=261.75 Aligned_cols=181 Identities=22% Similarity=0.306 Sum_probs=147.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.+++||+|+||.||+|++..+++.||||++.... .......+.+|+++|+.+ +|+||+++++++.+.+.+|+|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEE
Confidence 34888899999999999999999999999999986432 344557789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.+|+|... ....+..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceecccccc
Confidence 999999998643 345677888999999999999999999999999999999 6778899999999987653321
Q ss_pred ee--eeeeccC------------------CCCcchhHHHHHHHhcccccCC
Q 040003 288 FR--VWLRLHF------------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 288 ~~--~~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.. .+.+..| .-+-++.+.++.+++.|+..|.
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 10 0111111 1122455888899999988876
No 37
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.98 E-value=1.3e-31 Score=268.05 Aligned_cols=188 Identities=24% Similarity=0.341 Sum_probs=162.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-----CCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-----PNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pniv~~~~~~~~~~~ 203 (489)
+|++.+.||+|+||.|.+|++..|++.||||+|+.++ ....+...|+.||..|.+| -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 6899999999999999999999999999999997543 4456667899999999534 389999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|||+|++ ..+|+++++.++ .++...++.+++||+.+|.+||++||||+|||||||||.+.. ...|||+|||.|.+
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSSCF 340 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEecccccc
Confidence 99999999 569999998763 588999999999999999999999999999999999998755 45899999999998
Q ss_pred cCCCCceee----------eeeccC--CCCcchhHHHHHHHhcccccCCCCCC
Q 040003 282 FRPGLTFRV----------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 282 ~~~~~~~~~----------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
......... +|...| +.+.|+.+||+.++..|.+-||++.-
T Consensus 341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 776655221 455555 67788899999999999999998754
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.98 E-value=4.2e-31 Score=260.79 Aligned_cols=145 Identities=31% Similarity=0.462 Sum_probs=133.5
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+++ +||||+++++++...+.+|||||||.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999865544455667788999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEG 145 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCccc
Confidence 9999999888889999999999999999999999999999999999999 67788999999999764
No 39
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=3.6e-31 Score=262.37 Aligned_cols=234 Identities=29% Similarity=0.425 Sum_probs=180.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|.+.+.||+|.|+.|.+|++..++..||||.|.+..+.. ..++.+.+|+++|+.| +|||||+++.+.+....+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEE
Confidence 45999999999999999999999999999999998876554 3445589999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+|.+++++.+++++.+..++.++.|++.|++|||+++|||||||.+|||| +.+.++||+|||++.++..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccccc
Confidence 9999999999999999999999999999999999999999999999999999999 8888899999999999986654
Q ss_pred eeee-eeccC---------CCC-----cchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 FRVW-LRLHF---------LFF-----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 ~~~~-~~~~y---------pf~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
...+ ....| .+. .++.+.+++.++.|.++|.+..-+....-....+.-+..-++.+-..-|+
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLr--- 287 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLR--- 287 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHH---
Confidence 4331 11222 111 12335667777777777776544332211111222333344444444444
Q ss_pred hhhcCCCCCCccHHHHH
Q 040003 353 KMIDTDNSGYITLEELK 369 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~ 369 (489)
+.+-.+++.+.+.+++.
T Consensus 288 k~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 288 KFLVLNPSKRGPCDQIM 304 (596)
T ss_pred HhhccCccccCCHHHhh
Confidence 22445666666666654
No 40
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.98 E-value=4.4e-31 Score=266.34 Aligned_cols=150 Identities=29% Similarity=0.499 Sum_probs=138.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+||+|.+..+++.||||++.+...........+.+|+++|+.+ +|||||+++++|.+...+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence 589999999999999999999999999999999765444445567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||+||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+|+.+
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGF 151 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeeccccccc
Confidence 999999999999888889999999999999999999999999999999999999 67788999999999754
No 41
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-31 Score=259.84 Aligned_cols=236 Identities=25% Similarity=0.273 Sum_probs=176.9
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv~ 208 (489)
..+.+.||+|+||+||+|.++.+. .||+|++......... .+.|.+|+.+|.+| +|||||+++|++.+.. .++|||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~-~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDES-RKAFRREASLLSRL-RHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHH-HHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCceEEEE
Confidence 445567999999999999886442 2999999765544333 78999999999999 8999999999999887 799999
Q ss_pred eecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLG-VMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
|||++|+|.+++.. .+.++...+..++.+|+.|++|||+++ ||||||||+|||+ +.+. ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCccceeecc
Confidence 99999999999987 578999999999999999999999999 9999999999999 6675 999999999987764
Q ss_pred C-Ccee-e----------eeec-cCCCCcc----hhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchhhhhhccHHH
Q 040003 285 G-LTFR-V----------WLRL-HFLFFQK----QRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 285 ~-~~~~-~----------~~~~-~ypf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 344 (489)
. ...+ . ++++ .-+|..+ +.+.++.+++.|+.+|.+... ... .+.......++....+..
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p~~~~~~l 275 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIPKECPPHL 275 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHHH
Confidence 3 1111 1 2332 1233332 346677888888888775542 111 011111222233333333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. .+++.|+..+.+..|+...|..+
T Consensus 276 ~~l~~---~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 276 SSLME---RCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHH---HhCCCCCCcCCCHHHHHHHHHHH
Confidence 33333 38999999999999998888765
No 42
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=3.1e-31 Score=266.00 Aligned_cols=151 Identities=26% Similarity=0.472 Sum_probs=139.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEE
Confidence 589999999999999999999999999999999765444445567788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+||+|.+++...+.+++..++.++.|++.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccc
Confidence 999999999999888899999999999999999999999999999999999999 677899999999998653
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=2.4e-31 Score=258.63 Aligned_cols=186 Identities=24% Similarity=0.324 Sum_probs=155.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+|+++ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence 489999999999999999999999999999999765443444566788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~~~- 156 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRTW- 156 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCCcc-
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999987654321
Q ss_pred eeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 289 RVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~ 200 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD 200 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11111111 12234557788888888777654
No 44
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=6.7e-31 Score=264.98 Aligned_cols=150 Identities=26% Similarity=0.473 Sum_probs=137.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+++|+++ +||||+++++.|.+.+.+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence 499999999999999999999999999999999764433344556788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|..+
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGF 151 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 67889999999998643
No 45
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.7e-31 Score=251.46 Aligned_cols=151 Identities=30% Similarity=0.484 Sum_probs=141.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|.-|+||+|+.+.++..+|+|++.+..+.......++..|-+||+.+ +||.++.||..|+.....|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 3589999999999999999999999999999999988877778888999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||.||+|..+.+++ +.+++..++.++..++.||+|||-+|||.|||||+|||| .++|+|-|+||-|+...
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRC 229 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccC
Confidence 9999999999887664 579999999999999999999999999999999999999 78999999999987643
No 46
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=9.6e-31 Score=259.73 Aligned_cols=187 Identities=25% Similarity=0.372 Sum_probs=153.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.|++.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEE
Confidence 45999999999999999999876655 68999999765544455567788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCCc
Confidence 99999999999999888889999999999999999999999999999999999999 678899999999998764322
Q ss_pred ceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| .-+-++.+.++.+++.|..+|..
T Consensus 186 -~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 186 -YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred -ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 111111111 11123446777777777776653
No 47
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.97 E-value=1.9e-30 Score=257.37 Aligned_cols=187 Identities=27% Similarity=0.323 Sum_probs=155.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|..+ +||||+++++++.+....||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEE
Confidence 499999999999999999999999999999999865444444567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~~~~- 156 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVTYAN- 156 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCcccccccC-
Confidence 999999999999888889999999999999999999999999999999999999 6778899999999986643111
Q ss_pred eeeee-----------ccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 289 RVWLR-----------LHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 289 ~~~~~-----------~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..+.+ ..| .-+-++.++++.+++.|..+|...
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 00111 111 112234477788888887777543
No 48
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=7.1e-31 Score=254.16 Aligned_cols=194 Identities=27% Similarity=0.449 Sum_probs=165.0
Q ss_pred ccceee--cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSL--GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~--~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...|++ .+.||.|.||+||-|.++.+|+.||||+|.+.++....+ ..+++|+.||+.+ .||.||.+...|+..+.+
T Consensus 561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe-sqlR~EVaILq~l-~HPGiV~le~M~ET~erv 638 (888)
T KOG4236|consen 561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE-SQLRNEVAILQNL-HHPGIVNLECMFETPERV 638 (888)
T ss_pred HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchH-HHHHHHHHHHHhc-CCCCeeEEEEeecCCceE
Confidence 344665 478999999999999999999999999999887765444 7899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 205 HVVMELCAGGELFDRII--QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
++|||-+.| +..+.+. +.+++++.....++.||+.||.|||.++|+|.||||+||||.+.+.--.+||||||+|+++
T Consensus 639 FVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 639 FVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred EEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 999999954 6656553 4589999999999999999999999999999999999999988777788999999999987
Q ss_pred CCCCcee---------------------------------eeeeccCCCCcchhHHHHHHHhcccccCCCCCCCCC
Q 040003 283 RPGLTFR---------------------------------VWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDK 325 (489)
Q Consensus 283 ~~~~~~~---------------------------------~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 325 (489)
....... +.|++.|||.-. +.|-..|.+..+-||...|.+.
T Consensus 718 gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 718 GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEI 791 (888)
T ss_pred chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhc
Confidence 5422111 135677798655 6778889999999999999663
No 49
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=1.1e-30 Score=258.32 Aligned_cols=182 Identities=24% Similarity=0.316 Sum_probs=149.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+++|+.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999865544455667888999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee--ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR--VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~--~~ 291 (489)
|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......... ..
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccccccccc
Confidence 9999999888889999999999999999999999999999999999999 677889999999997643221111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~ 197 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCC
Confidence 11111 11123446777777777776654
No 50
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=1.9e-30 Score=262.15 Aligned_cols=150 Identities=28% Similarity=0.494 Sum_probs=138.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.+ +|||||+++++|.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 488999999999999999999999999999999765444455667889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||++|+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~ 151 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGF 151 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 77889999999998643
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=1.8e-30 Score=255.01 Aligned_cols=181 Identities=22% Similarity=0.318 Sum_probs=149.8
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+++ +||||+++++++.+....|+|||||.+|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999999765544555667888999999999 89999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--eee
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--WLR 293 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--~~~ 293 (489)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......... ..+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999888889999999999999999999999999999999999999 6778899999999986432221111 111
Q ss_pred ccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 294 LHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 294 ~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..| .-+-++.+.++.+++.|..+|...
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 122 112234477788888887777543
No 52
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=1.2e-30 Score=262.00 Aligned_cols=151 Identities=26% Similarity=0.497 Sum_probs=139.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|++..+++.||||++.+...........+.+|+.+|+.+ +||||++++++|.+...+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 589999999999999999999999999999999765444445567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecc
Confidence 999999999999888889999999999999999999999999999999999999 778899999999997653
No 53
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=4.9e-30 Score=257.58 Aligned_cols=188 Identities=28% Similarity=0.350 Sum_probs=153.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5699999999999999999999999999999999765444444556788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|..+.....
T Consensus 122 ~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 122 MEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccCCc
Confidence 999999999998854 468999999999999999999999999999999999999 6778999999999987643222
Q ss_pred ee---eeeecc---------------C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FR---VWLRLH---------------F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~---~~~~~~---------------y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. ...+.. | .-+-++.++++.+++.|..+|...
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 11 011111 1 112234477888888888777543
No 54
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=3.8e-30 Score=253.80 Aligned_cols=146 Identities=28% Similarity=0.411 Sum_probs=133.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
++||+|+||.||+|++..+++.||+|++.+.........+.+..|++++..+.+||||+++++++.+.+.+|+|||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998654444556677888999998876899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEG 146 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceec
Confidence 9999999888889999999999999999999999999999999999999 67789999999999764
No 55
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=1.3e-30 Score=257.33 Aligned_cols=182 Identities=26% Similarity=0.341 Sum_probs=149.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+++++.+ +||||++++++|.....+|||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3699999999999999999999999999865444455667788999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-ee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT-FR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~-~~-~~ 291 (489)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....... .. ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 6778899999999876422211 11 01
Q ss_pred ee-----------ccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LR-----------LHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~-----------~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+ ..| .-+-++.+.++.+++.|..+|..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 197 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCC
Confidence 11 111 11223457788888888877754
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=7.2e-30 Score=252.26 Aligned_cols=145 Identities=30% Similarity=0.466 Sum_probs=132.6
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+++++.+ +||||+++++++.....+|||||||.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999875544455567788999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|..++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEG 146 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeec
Confidence 9999998888889999999999999999999997 799999999999999 67788999999998764
No 57
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=5.8e-30 Score=248.17 Aligned_cols=187 Identities=24% Similarity=0.322 Sum_probs=153.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+|+++ +|+||+.+++++.+.+..|+|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEE
Confidence 78889999999999999999999999999999765444334445678999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||.+|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||++..+..+..
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCCe
Confidence 99999998887643 358899999999999999999999999999999999999 6678899999999987654332
Q ss_pred eee-eeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... +.+..| --+-++.+.++.+++.|..+|...
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 211 111112 112234578888888888877643
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=5e-30 Score=248.97 Aligned_cols=185 Identities=24% Similarity=0.296 Sum_probs=146.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||+||+|++..+++.||+|++..... ......+.+|+++++.+ +||||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEE
Confidence 359999999999999999999999999999999865422 22234677899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCC
Confidence 999975 8988886654 47889999999999999999999999999999999999 677889999999997653221
Q ss_pred ce--eeeeeccC----------C----CCcchhHHHHHHHhcccccCCC
Q 040003 287 TF--RVWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~--~~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ....+..| + -+.++.+.++.+++.|...|..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~ 206 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPG 206 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 00111111 1 1123446777788888777654
No 59
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=6.7e-30 Score=256.76 Aligned_cols=188 Identities=26% Similarity=0.326 Sum_probs=153.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence 4599999999999999999999999999999999764443444456678999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCCc
Confidence 999999999998754 468999999999999999999999999999999999999 7788999999999987643221
Q ss_pred ee---eeeecc---------------CC--CCcchhHHHHHHHhcccccCCCC
Q 040003 288 FR---VWLRLH---------------FL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~---~~~~~~---------------yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. .+.+.. |. -+-++.++++.+++.|..+|...
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 250 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC
Confidence 10 011111 11 11234478888888888887654
No 60
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=3.6e-30 Score=254.34 Aligned_cols=187 Identities=25% Similarity=0.294 Sum_probs=153.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+..|++++..+.+|++|+.+++++.+.+.+|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 88999999999999999999999999999999865444455667788999999999545678999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc--
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT-- 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~-- 287 (489)
||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCce
Confidence 99999999999888889999999999999999999999999999999999999 6778899999999875422111
Q ss_pred eeeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| ++ +-++.++++.+++.|..+|..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 111112222 11 223457788888888877754
No 61
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-29 Score=248.93 Aligned_cols=235 Identities=20% Similarity=0.298 Sum_probs=172.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
...++..||+|.||+||+|++.. .||||++..... .++..+.|++|+.++++- +|.||+-++||+..... .||.
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred Hhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeee
Confidence 35678899999999999998764 699999987654 456889999999999998 89999999999998877 9999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC---C
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR---P 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~---~ 284 (489)
.+|+|.+|+.+|.- +.+|.....+.|++||++|+.|||.++|||||||..||+| .+++.|||+||||+..-. .
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeeecc
Confidence 99999999999854 3578889999999999999999999999999999999999 667899999999986421 1
Q ss_pred CCceee------ee-----e--ccCCCCcc----hhHHHHHHHhcccccCCCCCCCCCCCC---CC-Ccc-hhhhhhccH
Q 040003 285 GLTFRV------WL-----R--LHFLFFQK----QRQSVLQTRLVRNLNEPGSLWPDKVAV---PP-IGD-RVIAESLSE 342 (489)
Q Consensus 285 ~~~~~~------~~-----~--~~ypf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~ 342 (489)
...+.. |+ + ...||.-. ..+.++++++.|.++|.. ...+...+ .. ... ........+
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIifmVGrG~l~pd~s~~~s~~p 622 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQIIFMVGRGYLMPDLSKIRSNCP 622 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheEEEecccccCccchhhhccCH
Confidence 111111 11 1 11255433 347899999999999983 22332211 00 000 111123334
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.++++|.. .|+..+.+-+....++...|..+
T Consensus 623 k~mk~Ll~--~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 623 KAMKRLLS--DCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred HHHHHHHH--HHHhcCcccCccHHHHHHHHHHh
Confidence 44444433 45566666788888877755544
No 62
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=8e-31 Score=256.22 Aligned_cols=235 Identities=23% Similarity=0.336 Sum_probs=183.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe-EEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA-VHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~l 206 (489)
+.|..++++|+|+||.+++++++..++.|++|.|.......+ ......+|+.+++++ .|||||.+.+.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEEE
Confidence 459999999999999999999999999999999987765544 444778999999999 89999999999999888 999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+||+||+|.+.+.+. ..+++..+..|+.|++.|+.|||+++|+|||||+.||++ ..+..|||.|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhcCC
Confidence 99999999999999764 358999999999999999999999999999999999999 6677799999999999988
Q ss_pred CCc--eeeeeeccC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHH
Q 040003 285 GLT--FRVWLRLHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 285 ~~~--~~~~~~~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
... .+.+.+..| ||.. ++.+|+++++..-++.|....|.... -+.. +.+...++......++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li--~ki~-~~~~~Plp~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELI--LKIN-RGLYSPLPSMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHH--HHHh-hccCCCCCccccHHHH
Confidence 753 333444444 4443 34477888888888888776664311 0000 0111122222333344
Q ss_pred HHH-hhhcCCCCCCccHHHHHH
Q 040003 350 EMF-KMIDTDNSGYITLEELKK 370 (489)
Q Consensus 350 ~~F-~~~D~d~~g~i~~~el~~ 370 (489)
.++ .++..++.-+++..+|..
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhh
Confidence 333 467788888999999854
No 63
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=6.2e-30 Score=254.15 Aligned_cols=240 Identities=20% Similarity=0.232 Sum_probs=168.3
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA- 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 201 (489)
++|+++++||+|+||.||+|.+. .+++.||+|++... ........+.+|+.+|..+.+|||||++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG--ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc--cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 56999999999999999999753 34578999998643 23345567899999999997799999999988764
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
..+|+|||||++|+|.+++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4689999999999999988643
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---------
Q 040003 224 ----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--------- 290 (489)
Q Consensus 224 ----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--------- 290 (489)
..++...+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+........
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 136677888899999999999999999999999999999 6678899999999986543222110
Q ss_pred ------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCC
Q 040003 291 ------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDN 359 (489)
Q Consensus 291 ------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~ 359 (489)
+....| .-+-++.+.++.+++. |..+|+........ .+..-.........+.+-.. -+.+++..|+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---li~~cl~~dp 318 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYR---IMLACWQGDP 318 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHH---HHHHHccCCh
Confidence 111111 1122345778888875 77777653221100 00000000011122222221 2336778888
Q ss_pred CCCccHHHHHHHHHHh
Q 040003 360 SGYITLEELKKGLQRV 375 (489)
Q Consensus 360 ~g~i~~~el~~~l~~l 375 (489)
+.|.+..|+...|..+
T Consensus 319 ~~RPs~~el~~~l~~~ 334 (338)
T cd05102 319 KERPTFSALVEILGDL 334 (338)
T ss_pred hhCcCHHHHHHHHHHH
Confidence 8899999988877654
No 64
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=9.9e-30 Score=251.06 Aligned_cols=187 Identities=25% Similarity=0.283 Sum_probs=152.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|++..+++.||+|++.+...........+..|..++..+.+|++|+.+++++.+.+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 88899999999999999999999999999999875444445556778899999888678999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
||.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 777889999999998643211111
Q ss_pred e--eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 290 V--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 290 ~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ..+..| ++ +-++.++++.+++.|..+|..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 1 111111 11 123446777777777776654
No 65
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=1.2e-29 Score=254.89 Aligned_cols=187 Identities=28% Similarity=0.345 Sum_probs=153.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5699999999999999999999999999999999764443444556688999999998 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 122 ~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 122 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCcCCc
Confidence 999999999998754 468999999999999999999999999999999999999 6778899999999987643221
Q ss_pred ee---eeeeccC-----------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FR---VWLRLHF-----------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~---~~~~~~y-----------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ...+..| .-+-++.+.++.+++.|..+|..
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 11 1111111 11223447788888888877754
No 66
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=1e-29 Score=251.83 Aligned_cols=153 Identities=22% Similarity=0.394 Sum_probs=138.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.++..+ +|+||+.++++|.+.+++|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEE
Confidence 599999999999999999999999999999999764434444566788999999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||.||+|.+++.+ ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCC
Confidence 99999999999876 4578999999999999999999999999999999999999 67788999999999876543
No 67
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=1.7e-29 Score=253.16 Aligned_cols=151 Identities=26% Similarity=0.463 Sum_probs=138.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 488999999999999999999999999999999765443445567888999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+||+|.+++...+.+++..++.++.|++.||+|||++|||||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccc
Confidence 999999999999888889999999999999999999999999999999999999 678899999999987653
No 68
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=8e-30 Score=251.33 Aligned_cols=183 Identities=25% Similarity=0.295 Sum_probs=148.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++..+.+||||+++++++.+...+|+|||||.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999997654444455667788999998876799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee--ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR--VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~--~~ 291 (489)
|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......... ..
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 677889999999987642211111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| .-+-++.+.++.+++.|..+|..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 11111 11223447777788888777754
No 69
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=4.5e-30 Score=252.63 Aligned_cols=183 Identities=25% Similarity=0.326 Sum_probs=148.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
++||+|+||.||+|.+..+++.||+|++++.........+.+..|..++..+.+||||+++++++.....+|+|||||+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998654434445566777888887766899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--e
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--W 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--~ 291 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.......... .
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 6778899999999986543222111 1
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| .-+-++.+.++.+++.|..+|..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence 11112 12223457788888888777654
No 70
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=2.5e-29 Score=248.99 Aligned_cols=153 Identities=22% Similarity=0.365 Sum_probs=137.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..+ +|+||+++++++.+.+..|+||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 599999999999999999999999999999999764333344556688899999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||.||+|.+++.. .+.+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999999999976 4678999999999999999999999999999999999999 67788999999999876543
No 71
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=2.3e-29 Score=249.23 Aligned_cols=153 Identities=28% Similarity=0.422 Sum_probs=139.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+....||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence 489999999999999999999999999999999875544445567788999999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCC
Confidence 999999999999776 679999999999999999999999999999999999999 77889999999999876543
No 72
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-30 Score=216.92 Aligned_cols=185 Identities=24% Similarity=0.356 Sum_probs=151.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.-.++||+|.||+||+|+++.+++.||+|.++...- ++..-....+||.+|+.| +|.|||++++....+..+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkel-khknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeH
Confidence 36667899999999999999999999999999976432 222335678999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||. .+|..+... +|.+....++.++.|++.||.+||+++++||||||.|+|+ +.+|.+||+|||+|+.+.-...
T Consensus 81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCceE
Confidence 9995 478777654 5789999999999999999999999999999999999999 7789999999999998876654
Q ss_pred eee--eeeccC--------------CCCcchhHHHHHHHhc-ccccCCC
Q 040003 288 FRV--WLRLHF--------------LFFQKQRQSVLQTRLV-RNLNEPG 319 (489)
Q Consensus 288 ~~~--~~~~~y--------------pf~~~~~~~~~~~i~~-~~~~~~~ 319 (489)
... +.+..| -...++.++|+.++-. |.+-||+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 332 333333 2334566888888775 4555665
No 73
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=1.6e-29 Score=250.16 Aligned_cols=182 Identities=21% Similarity=0.313 Sum_probs=151.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++++...........+.+|+.++..+.+||||++++++|.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999998765555556677889999999997799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC-CCCcee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR-PGLTFR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~-~~~~~~-~~ 291 (489)
|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... .+.... ..
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence 9999998888899999999999999999999999999999999999999 677889999999997532 111111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.+..| .-+-++.+.++.+++.|..+|.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 11112 1222445888889999988875
No 74
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=1.2e-29 Score=250.46 Aligned_cols=186 Identities=26% Similarity=0.308 Sum_probs=148.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHH---HhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH---HLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~---~l~~hpniv~~~~~~~~~~~~~l 206 (489)
|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|++++. .+ +||||+++++++.+...+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE-RHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEcCCEEEE
Confidence 678899999999999999999999999999998654434445667778877765 44 69999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||.+++|..++. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 v~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 999999999988764 4579999999999999999999999999999999999999 677899999999987543221
Q ss_pred cee--eeeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 287 TFR--VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~~~--~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ...+..| .-+-++.+.++.+++.|..+|...
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 111 1111111 112234477888888888777543
No 75
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=5.2e-30 Score=252.19 Aligned_cols=184 Identities=24% Similarity=0.305 Sum_probs=148.1
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|+.++..+.+||||+++++++.+.+.+|+|||||.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999997654333344566778988888766899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--e
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--W 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--~ 291 (489)
|+|..++...+.+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++....+..... .
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999999888889999999999999999999999999999999999999 6778899999999875432211111 1
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+..| .-+-++.+.++.+++.|..+|...
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11111 112234477888888887777543
No 76
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-31 Score=251.07 Aligned_cols=227 Identities=22% Similarity=0.359 Sum_probs=176.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|+..+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+.+|+.+|.++ +++||.++|+.|..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHH
Confidence 34888899999999999999999999999999997653 345678899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||++.+.+...+.+.+..+..+++.++.||.|||..+.||||||+.|||+ ...+.+||+|||+|........
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeechhh
Confidence 9999999999999877777999999999999999999999999999999999999 5568899999999998876655
Q ss_pred eeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC--------------CCCCCCCcchhhhh--------hccHHHH
Q 040003 288 FRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD--------------KVAVPPIGDRVIAE--------SLSEEEI 345 (489)
Q Consensus 288 ~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--------~~~~~~~ 345 (489)
.+..+ .+.|||+..+ + |....|+...++|.- ....+..+...|+. .+++.-.
T Consensus 167 rr~tf-vGTPfwMAPE--V---I~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~k 240 (467)
T KOG0201|consen 167 RRKTF-VGTPFWMAPE--V---IKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFK 240 (467)
T ss_pred ccccc-cccccccchh--h---hccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHH
Confidence 44222 2348887632 1 223356666666621 11111111222222 2333222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.+. .|++.|+.-|.++.+|.
T Consensus 241 EFV~---~CL~k~P~~RpsA~~LL 261 (467)
T KOG0201|consen 241 EFVE---ACLDKNPEFRPSAKELL 261 (467)
T ss_pred HHHH---HHhhcCcccCcCHHHHh
Confidence 2222 46899999999999985
No 77
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=242.49 Aligned_cols=151 Identities=30% Similarity=0.483 Sum_probs=143.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
-+.|..+++||+|.||+|.+|+.+.+++.||+|++++..+....++..-+.|-++|+.. +||.+..+...|+..+.+|+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceEEE
Confidence 35688999999999999999999999999999999998888888888889999999998 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||||..||.|+-+|.+...+++..++.+...|+.||.|||+++||.||||.+|+|| |.+|++||+||||++.
T Consensus 246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchh
Confidence 99999999999999988899999999999999999999999999999999999999 8999999999999985
No 78
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=6e-30 Score=255.49 Aligned_cols=153 Identities=27% Similarity=0.522 Sum_probs=140.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|++..+++.||||++.+...........+.+|+.++..+ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence 599999999999999999999999999999999865444445567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCccc
Confidence 999999999999888889999999999999999999999999999999999999 77888999999999876544
No 79
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=2.5e-29 Score=248.94 Aligned_cols=144 Identities=26% Similarity=0.467 Sum_probs=129.4
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
||+|+||+||+|++..+++.||||++.+..............|..++..+. +||||+.+++++.+...+|+|||||.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999997654444444556667888887764 699999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKAN 146 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCC
Confidence 9999999888899999999999999999999999999999999999999 66788999999998764
No 80
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.9e-30 Score=249.74 Aligned_cols=231 Identities=23% Similarity=0.302 Sum_probs=172.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.+++++.||+|.||.||+|.++.+ ..||+|.++..... .+.+.+|+++|++| +|+|||++++++...+.+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~----~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMS----PEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccC----hhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEEE
Confidence 466789999999999999998754 37999999765433 25677999999999 8999999999999988999999
Q ss_pred eecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||..|+|.++|.. .+.+...+...++.||+.|++||+++++|||||-..|||+ +++..+||+|||||+.+ ...
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~-~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLI-GDD 356 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEccccccccc-CCC
Confidence 99999999999987 4578999999999999999999999999999999999999 77889999999999943 334
Q ss_pred ceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCCCC----------------------CcchhhhhhccHHH
Q 040003 287 TFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPP----------------------IGDRVIAESLSEEE 344 (489)
Q Consensus 287 ~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~ 344 (489)
.++.--.+.+|..-...+ .+..+++...++.|+.-..+-. .+-++-.....+++
T Consensus 357 ~Y~~~~~~kfPIkWtAPE----a~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~ 432 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPE----ALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDE 432 (468)
T ss_pred ceeecCCCCCCceecCHH----HHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHH
Confidence 444333445553322222 3345556666777754331100 01112222233444
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-++ +-.++..++..|.|.+.|...+..+
T Consensus 433 vY~l--M~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 433 VYEL--MKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred HHHH--HHHHhhCCcccCCCHHHHHHHHHHh
Confidence 4333 2356778888899988777766554
No 81
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5e-30 Score=253.07 Aligned_cols=218 Identities=22% Similarity=0.326 Sum_probs=178.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|..++.||-|+||.|.+++...|...||+|.+++..+-....+..++.|-.||... +.+.||+||..|++.+.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence 488899999999999999999999999999999988777777788899999999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC--C
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG--L 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~--~ 286 (489)
+|++||++..+|.+.+.|.|..++.++..+..|+++.|..|+|||||||+|||| |.+|+|||+||||+.-++-. .
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999 89999999999999755311 0
Q ss_pred ceee------------------------------------------eeeccC---------------CCCcchhHHHHHH
Q 040003 287 TFRV------------------------------------------WLRLHF---------------LFFQKQRQSVLQT 309 (489)
Q Consensus 287 ~~~~------------------------------------------~~~~~y---------------pf~~~~~~~~~~~ 309 (489)
.+.. +.++.| .||.. +.|+.+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~--gvil~e 863 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV--GVILYE 863 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh--hHHHHH
Confidence 0000 344444 56555 889999
Q ss_pred HhcccccCCCCCCCCCC----CCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 310 RLVRNLNEPGSLWPDKV----AVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 310 i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
++.|..+|-.+.--... .|..........+++++....|.++.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc 910 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC 910 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh
Confidence 99999999765432211 12222222223466777666666554
No 82
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=2.9e-29 Score=248.65 Aligned_cols=187 Identities=19% Similarity=0.255 Sum_probs=152.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.++||+|+||.||+++++.+++.||+|++.+...........+.+|+.++..+ +|+||+.+++++.+...+|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999754333344455688899999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||.+|+|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+.....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCCc
Confidence 99999999999976 4678999999999999999999999999999999999999 6778899999999976543222
Q ss_pred eee---eeecc----------------C--CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV---WLRLH----------------F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~---~~~~~----------------y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... ..+.. | .-+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 111 11111 1 11223447788888888777754
No 83
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2.7e-29 Score=248.89 Aligned_cols=186 Identities=25% Similarity=0.394 Sum_probs=150.8
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
|++++.||+|+||+||+|++. .+++.||+|++.+.... .....+.+.+|+.+++.+.+||||+++++++...+.+|
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 889999999999999998864 47899999999754322 23345678899999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+|||||.+|+|.+++..++.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCcccccc
Confidence 999999999999999888889999999999999999999999999999999999999 66788999999999875432
Q ss_pred Cce---eeeeeccC--------------CCCcchhHHHHHHHhcccccCC
Q 040003 286 LTF---RVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~---~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
... ....+..| .-+-++.+.++.+++.|..+|.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence 211 11111111 1122344777888888877765
No 84
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.5e-29 Score=249.74 Aligned_cols=187 Identities=24% Similarity=0.281 Sum_probs=152.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|+..+.||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.++..+.+|++|+++++++.+.+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 67889999999999999999999999999999865444445566788899999988667889999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCccc
Confidence 99999999999888889999999999999999999999999999999999999 677889999999998643221111
Q ss_pred e--eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 290 V--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 290 ~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ..+..| + -+-++.+.++.+++.|..+|..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 1 111111 1 1223447778888888777654
No 85
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-29 Score=248.77 Aligned_cols=224 Identities=26% Similarity=0.345 Sum_probs=170.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---E-EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---E-FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~-~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.-.+.++||+|+||.||+|+.+..+. . ||+|..+.........+..+.+|+++|+.+ +|||||++||+......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCc
Confidence 334567899999999999998776432 3 899988754445677889999999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|||||+|.||+|.++|.+.+ .++..+...++.+++.||+|||++++|||||-..|+|+ .....+||+|||||+.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCCCeEEeCccccccCC
Confidence 999999999999999999876 49999999999999999999999999999999999999 55666899999998765
Q ss_pred CCCCcee-------eee---------------------------e-ccCCCCcchhHHHHHHHhcccccCCCCCCCCCCC
Q 040003 283 RPGLTFR-------VWL---------------------------R-LHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVA 327 (489)
Q Consensus 283 ~~~~~~~-------~~~---------------------------~-~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 327 (489)
..-.... .|| . +..||.+.....+...|....+..+.
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-------- 384 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-------- 384 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC--------
Confidence 3100000 011 1 11144444444444444333332221
Q ss_pred CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 328 VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
....+..+..+.. +++..|++-|.++.++...+..+
T Consensus 385 ----------~~~~p~~~~~~~~--~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 385 ----------PSKTPKELAKVMK--QCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred ----------CCCCHHHHHHHHH--HhccCChhhccCHHHHHHHHHHH
Confidence 1234455555544 77888888999999998888765
No 86
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-29 Score=260.37 Aligned_cols=234 Identities=22% Similarity=0.296 Sum_probs=169.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEE-EEe------C
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGA-YED------A 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~-~~~------~ 201 (489)
.++|.+.|.+|||+.||+|.+...+..||+|++-. .++..++.+++||++|+.|++|+|||.+++. ... .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 47889999999999999999998889999998853 4778889999999999999999999999993 221 2
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
-.++|+||||.||.|.|++..+ ..|++.++..|+.+++.||.+||.+. |||||||-||||| ..++..||||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl---s~~g~~KLCDFG 191 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL---SADGNYKLCDFG 191 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---cCCCCEEeCccc
Confidence 3678999999999999999754 46999999999999999999999998 9999999999999 667889999999
Q ss_pred cccccCCCC-ceee----------eeeccC------------CCCc----chhHHHHHHHhcccccCCCCCCCCCCCCCC
Q 040003 278 LSMFFRPGL-TFRV----------WLRLHF------------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKVAVPP 330 (489)
Q Consensus 278 la~~~~~~~-~~~~----------~~~~~y------------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 330 (489)
.|.-..... .... .-+..| |..- |..+++++.+....-+|....- .++-
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---laIl- 267 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---LAIL- 267 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---eeEE-
Confidence 987543222 1111 111122 2221 2236777776665555543210 0000
Q ss_pred Ccchhhhh--hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 331 IGDRVIAE--SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 331 ~~~~~~~~--~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+.+.++. ..+..-...|+ .++..|++-|+++.++...+.++
T Consensus 268 ng~Y~~P~~p~ys~~l~~LI~---~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 268 NGNYSFPPFPNYSDRLKDLIR---TMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred eccccCCCCccHHHHHHHHHH---HHhccCcccCCCHHHHHHHHHHH
Confidence 00111111 12222222222 56889999999999988776665
No 87
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=4.3e-29 Score=247.06 Aligned_cols=182 Identities=20% Similarity=0.279 Sum_probs=151.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++.+||||+++++++.+...+|+|||||.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998765555566677889999998886899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC-Ccee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG-LTFR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~-~~~~-~~ 291 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..... .... ..
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999998888889999999999999999999999999999999999999 77789999999999764221 1111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.+..| .-+-++.+.++.+++.|..+|.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 11111 1223445788888888887774
No 88
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.2e-29 Score=250.00 Aligned_cols=184 Identities=26% Similarity=0.338 Sum_probs=151.0
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+.+|++++..+.+||||+++++++.+.+.+|+|||||.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998765444555677889999999887799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc--eeee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT--FRVW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~--~~~~ 291 (489)
|+|..++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++....... ...+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence 9999999888889999999999999999999999999999999999999 6778899999999975422211 1111
Q ss_pred eeccC---------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 292 LRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 292 ~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+..| ++ +-++.+.++.+++.|..+|...
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 11122 11 2234577888888888877543
No 89
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=1.5e-29 Score=248.79 Aligned_cols=183 Identities=25% Similarity=0.315 Sum_probs=147.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|++..+++.||+|++.+..............|..++..+.+||||+++++++.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998654333344566778888888765899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc--eeee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT--FRVW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~--~~~~ 291 (489)
|+|.+++.....+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++....+.. ....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeeec
Confidence 9999999887789999999999999999999999999999999999999 6778899999999976432221 1111
Q ss_pred eeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| + -+-++.++++.+++.|..+|..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 11122 1 1223447888888888877754
No 90
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=3.4e-29 Score=251.88 Aligned_cols=241 Identities=19% Similarity=0.243 Sum_probs=172.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||.||+|++..++ ..||+|++.... .....+.+.+|+++|+.+.+|+|||++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 346999999999999999999865443 579999986542 2344677889999999996799999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
..+|+|||||.+|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999988542
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 224 ------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 224 ------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+..+.....
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCCcceeec
Confidence 136777889999999999999999999999999999999 5677899999999987644332211
Q ss_pred --------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 291 --------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 291 --------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
+....| .-+-++.+.++.+++. |..+|+........ .+............+.+-.+.+.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~-- 349 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMK-- 349 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHH--
Confidence 011111 1122345778888875 88777654321100 00000000011112222222222
Q ss_pred HhhhcCCCCCCccHHHHHHHHHHh
Q 040003 352 FKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+++..|+..|++..++.++|.++
T Consensus 350 -~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 350 -MCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred -HHcCCChhhCcCHHHHHHHHHHH
Confidence 56778888899999998888764
No 91
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.5e-29 Score=245.18 Aligned_cols=182 Identities=20% Similarity=0.249 Sum_probs=144.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 207 (489)
.|.-...||+|+||.||+|.... +..||||.+....... ..+|.+|+.+|.++ +|||+|+|+|||.+.+ +.+||
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred CCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEE
Confidence 46666789999999999998764 4899999876543221 34599999999999 6999999999999998 59999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|||.+|+|.++|.... .+++.....|+..++.||+|||+.. |||||||++|||| |.+..+||+|||+|+..
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLG 227 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccC
Confidence 99999999999997654 7899999999999999999999854 9999999999999 88999999999999766
Q ss_pred CC-CCceee--eeeccC--C-CC----------cchhHHHHHHHhcccccCC
Q 040003 283 RP-GLTFRV--WLRLHF--L-FF----------QKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 283 ~~-~~~~~~--~~~~~y--p-f~----------~~~~~~~~~~i~~~~~~~~ 318 (489)
.. ...... ..+.+| | |. --+.+.++.+++.|+....
T Consensus 228 ~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d 279 (361)
T KOG1187|consen 228 PEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVD 279 (361)
T ss_pred CccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccC
Confidence 54 222211 223333 1 00 0133667778888885444
No 92
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=2.3e-29 Score=248.47 Aligned_cols=183 Identities=25% Similarity=0.357 Sum_probs=146.9
Q ss_pred ceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|+.+ +||||++++++|...+.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 57999999999999864 47889999999764322 223345678999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
|+.+++|.+++...+.+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 677899999999997543222211
Q ss_pred e--eeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 290 V--WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 290 ~--~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. ..+..| .-+-++.+.++.+++.|..+|...
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~ 203 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE 203 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC
Confidence 1 111111 111234477888888888877643
No 93
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=272.87 Aligned_cols=152 Identities=28% Similarity=0.433 Sum_probs=141.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|.++++||+|+||.|.+++++.|++.||+|++.+-..-...+...|..|-.||..- +.+.||.++..|++..++|+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEE
Confidence 5699999999999999999999999999999999875444445557788899999886 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||+||+|..++.+.+++++..++.|+..|+.||..||+.|+|||||||+|||| |..|+|||+|||.+..+.
T Consensus 154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcC
Confidence 9999999999999998899999999999999999999999999999999999999 899999999999998876
No 94
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-30 Score=258.49 Aligned_cols=188 Identities=24% Similarity=0.331 Sum_probs=155.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC------
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV------ 202 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~------ 202 (489)
.|...+.||+|+||.||+++++.+|+.||||.+++.. ....+++..+|+++|++| +|+|||++++.-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccc
Confidence 3667788999999999999999999999999987643 334567889999999999 6999999998765543
Q ss_pred eEEEEEeecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeecc
Q 040003 203 AVHVVMELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGL 278 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGl 278 (489)
...+|||||.||+|...+.+. ..+++.+...++..+..|+.|||++|||||||||+||++.... ....-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 567999999999999999643 4599999999999999999999999999999999999985433 445689999999
Q ss_pred ccccCCCCceee-eeeccC--C--------C----CcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTFRV-WLRLHF--L--------F----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~y--p--------f----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|+-+.++..+.. +++..| | | +-++.+.+++....|..+|-.
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 999988886665 455555 1 1 123558888888888888864
No 95
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=9e-29 Score=243.69 Aligned_cols=147 Identities=31% Similarity=0.495 Sum_probs=130.3
Q ss_pred ceeccCCceEEEEEEE---cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVE---KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~---~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
+.||+|+||.||++++ ..+++.||+|++.+.... ......+.+|+++|+++ +||||+++++++.+.+.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999876 357899999999764322 23345677899999999 899999999999999999999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.+|+|.+++.+...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~ 151 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDH 151 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCC
Confidence 9999999999888889999999999999999999999999999999999999 67788999999999865443
No 96
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-30 Score=255.89 Aligned_cols=188 Identities=24% Similarity=0.411 Sum_probs=165.4
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+....|.-++.||.|+||.||-|++..+.+.||||.+.-......+..+.++.|+..|++| .|||+|.+-|+|......
T Consensus 23 DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 23 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTA 101 (948)
T ss_pred CHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchH
Confidence 3445688899999999999999999999999999999876667778889999999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||||||-| +-.|++. .++.+.+.++..|+.+.+.||.|||+++.||||||..|||| .+.|.|||+|||.|....
T Consensus 102 WLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 102 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMA 177 (948)
T ss_pred HHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcC
Confidence 999999965 6666663 34578999999999999999999999999999999999999 778999999999999988
Q ss_pred CCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 284 PGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 284 ~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
+..++ .+.|||... +++-.+=.|.|+-..++|+-
T Consensus 178 PAnsF-----vGTPywMAP--EVILAMDEGqYdgkvDvWSL 211 (948)
T KOG0577|consen 178 PANSF-----VGTPYWMAP--EVILAMDEGQYDGKVDVWSL 211 (948)
T ss_pred chhcc-----cCCccccch--hHheeccccccCCccceeec
Confidence 87776 356999984 55556677999999999953
No 97
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=5.6e-29 Score=250.55 Aligned_cols=239 Identities=19% Similarity=0.240 Sum_probs=166.9
Q ss_pred cceeecceeccCCceEEEEEEE-----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE-----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
++|++++.||+|+||.||+|.+ ..++..||+|+++... .....+.+.+|+.+|+.+.+|||||++++++.+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 4599999999999999999974 3466789999986432 23345678899999999977999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------------------------------------------------
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---------------------------------------------------------- 224 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 224 (489)
..|+|||||.+|+|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999999886432
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 225 -----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 225 -----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCccceeccCccc
Confidence 35677788999999999999999999999999999999 5567899999999987654322
Q ss_pred eee--------------ee-eccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHH
Q 040003 288 FRV--------------WL-RLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 288 ~~~--------------~~-~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 347 (489)
... ++ ...| .-+-++.+.++.+++. |..+|......... .+............+. ++..
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 348 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPS-EMYD 348 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCH-HHHH
Confidence 111 00 1111 1112344777777775 66655432211000 0000000000111122 2222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+ +-.+++.|++.|.++.|+...|.+
T Consensus 349 l--i~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 349 I--MKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred H--HHHHccCChhHCcCHHHHHHHHHh
Confidence 2 225677888888888888777754
No 98
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.96 E-value=1.3e-28 Score=238.84 Aligned_cols=187 Identities=21% Similarity=0.287 Sum_probs=151.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+++++.+ +||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEE
Confidence 59999999999999999999999999999999975432 233456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.++.+..+....+.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++..+..+...
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCcccccccccc
Confidence 999987776554445678999999999999999999999999999999999999 67788999999999876533211
Q ss_pred e---eeeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 289 R---VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 289 ~---~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. ...+..| .-+-++.+.++.+++.|...|+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 1 1111111 112235578888899998877653
No 99
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-28 Score=239.47 Aligned_cols=186 Identities=24% Similarity=0.378 Sum_probs=155.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
....++++||+|-||.|.+|.-. .+..||+|.++.. .....+..|.+||++|.+| +|||||+++|.|..++.+++|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~--a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI 613 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPD--ATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMI 613 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcc--cchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHH
Confidence 45778899999999999999854 4689999998654 3445568999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||++|+|..++..+. .........++.||..|+.||.+.++|||||.+.|+|+ +.++++||+|||+++-+..+
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccC
Confidence 99999999999998763 23445566799999999999999999999999999999 88999999999999999888
Q ss_pred CceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 286 LTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 286 ~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
..+..-.+.-.|..-. -.+.|+.|++...++.|..
T Consensus 691 ~yy~vqgr~vlpiRwm----awEsillgkFttaSDvWaf 725 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWM----AWESILLGKFTTASDVWAF 725 (807)
T ss_pred Cceeeecceeeeeeeh----hHHHHHhccccchhhhhhh
Confidence 8877633322342211 2356788999888888843
No 100
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=1.4e-28 Score=238.52 Aligned_cols=186 Identities=25% Similarity=0.326 Sum_probs=150.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++.+ +||||+.+++++.....+|+|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEEe
Confidence 88899999999999999999999999999999765443334445678899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||.+|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +..+.++|+|||++..+..+..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCCc
Confidence 99999999887653 358999999999999999999999999999999999999 6678899999999987654332
Q ss_pred eee-eeeccC-----------C--CCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... +.+..| . -+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence 211 111111 0 1112347778888888777653
No 101
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=5.2e-28 Score=250.91 Aligned_cols=231 Identities=19% Similarity=0.217 Sum_probs=168.8
Q ss_pred cceeecceeccCCceEEEEEEEcCC-CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..|.+.+.||+|+||.||+|.+..+ ++.||+|.+.. ........+.+|+.+|+.+ +|||||++++++...+.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~---~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML---NDERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc---CCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEE
Confidence 3499999999999999999998877 78899987643 2344556788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||||.||+|.+++.. ...+++..+..++.||+.||+|||++|||||||||+|||+ +..+.+||+|||+|+.+
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCceec
Confidence 9999999999987754 3468899999999999999999999999999999999999 67788999999999877
Q ss_pred CCCCcee----eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFR----VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~----~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 343 (489)
....... ...+..| .+ +-++.++++.+++.|..+|......... ...... ......++.+
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~s~~ 298 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-DPFPCPVSSG 298 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCccCCHH
Confidence 5432211 1112222 11 1234577888888887776543210000 000000 0011123333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
-.+.+. .++..|++.|.+..++.
T Consensus 299 ~~~li~---~~L~~dP~~Rps~~~~l 321 (478)
T PTZ00267 299 MKALLD---PLLSKNPALRPTTQQLL 321 (478)
T ss_pred HHHHHH---HHhccChhhCcCHHHHH
Confidence 333333 46778889999988864
No 102
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=2.6e-28 Score=241.85 Aligned_cols=186 Identities=20% Similarity=0.263 Sum_probs=153.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+..++..+|+|.+.... .......+.+|+++|+.+ +||||++++++|.+.+.+|+|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEE
Confidence 56999999999999999999999999999999986532 344557789999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.+|+|.+++...+.+++..+..++.+++.||.|||+. +|+||||||+|||+ +.++.+||+|||++..+....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhhhc
Confidence 99999999999998888899999999999999999999985 79999999999999 667789999999998654321
Q ss_pred ceeeeeec-----------cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRL-----------HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~-----------~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+. .| .-+.++.++++.+++.|..+|+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 11111111 11 11223457788888888877753
No 103
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=1.5e-28 Score=242.77 Aligned_cols=145 Identities=25% Similarity=0.452 Sum_probs=128.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI-MHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||+||+|.+..+|+.||+|++.+...........+.+|..+ ++.+ +||||+++++++...+.+|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 369999999999999999999999999976544344445566667664 5566 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEG 146 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccC
Confidence 99999999888889999999999999999999999999999999999999 67788999999998754
No 104
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=1.3e-28 Score=242.97 Aligned_cols=145 Identities=27% Similarity=0.467 Sum_probs=128.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI-MHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+.+|..+ ++.+ +||||+++++++.+....|+|||||.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 369999999999999999999999999976543333444556666654 5667 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEG 146 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCccc
Confidence 99999999888889999999999999999999999999999999999999 67788999999998764
No 105
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=1.3e-28 Score=243.47 Aligned_cols=182 Identities=19% Similarity=0.277 Sum_probs=151.3
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++.++.+||||+.+++++.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998765555566778899999999997799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC-CCcee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP-GLTFR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~-~~~~~-~~ 291 (489)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.... +.... .+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence 9999998888889999999999999999999999999999999999999 6678899999999975322 11111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.+..| .-+-++.+.++.+++.|..+|.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence 11122 1122345788888888888774
No 106
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=4.8e-28 Score=239.88 Aligned_cols=186 Identities=19% Similarity=0.219 Sum_probs=154.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..++..||+|++... ......+.+.+|+++|+++ +||||+++++++...+.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 5699999999999999999999999999999998653 2344567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++..+....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCcccccccccc
Confidence 99999999999998878899999999999999999999986 69999999999999 667889999999998664332
Q ss_pred ceeeeeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+..| . -+-++.+.++.+++.|+.+|..
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 2111111112 1 1123447788888888888753
No 107
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=2.4e-28 Score=236.24 Aligned_cols=180 Identities=25% Similarity=0.356 Sum_probs=147.3
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||+||+|.+..+++.||+|.+.+.........+.+..|+++|+.+ +|+||+++.+++.....+|+|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 79999999999999999999999999765444444556788999999999 89999999999999999999999999999
Q ss_pred hHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 216 LFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 216 L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+..+.....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence 9887743 3468999999999999999999999999999999999999 6678899999999987654432211
Q ss_pred -eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 291 -WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 -~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 111111 12223557888888888888764
No 108
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=1.5e-28 Score=242.50 Aligned_cols=182 Identities=22% Similarity=0.299 Sum_probs=143.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH-HHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR-IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+. +++.+ +||||+++++++.+.+..|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999999999999999997654333344455666665 56777 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
||+|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..........
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence 99999998887889999999999999999999999999999999999999 6778899999999876422211111
Q ss_pred eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 291 WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+..| + -+-++.++++.+++.|..+|..
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence 111111 1 1122346777777777777654
No 109
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96 E-value=4.7e-28 Score=236.99 Aligned_cols=153 Identities=25% Similarity=0.385 Sum_probs=131.3
Q ss_pred cceeecceeccCCceEEEEEEEcC----------------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----------------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 191 (489)
+.|++.++||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+|.++ +||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD--ANKNARNDFLKEVKILSRL-KDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC--CCHHHHHHHHHHHHHHhhc-CCCCe
Confidence 469999999999999999997532 3457999998653 2344567789999999999 89999
Q ss_pred eEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 040003 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-------------------HYTERKAADLTRIIVGVVEACHSLGVMH 252 (489)
Q Consensus 192 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiH 252 (489)
+++++++.+....|+|||||.+|+|.+++.... .++...+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999886532 2566778899999999999999999999
Q ss_pred cCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 253 rDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||+|||+ +.++.+||+|||+++.+..+.
T Consensus 162 ~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~ 192 (304)
T cd05096 162 RDLATRNCLV---GENLTIKIADFGMSRNLYAGD 192 (304)
T ss_pred cCcchhheEE---cCCccEEECCCccceecccCc
Confidence 9999999999 667889999999998765544
No 110
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-30 Score=256.79 Aligned_cols=193 Identities=23% Similarity=0.378 Sum_probs=164.3
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
-+..+.|.|+..||.|+||.||+|..+.++-..|.|+|.. ...+.++.++-||+||..+ +||+||+|++.|...+.
T Consensus 28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~C-dHP~ivkLl~ayy~enk 103 (1187)
T KOG0579|consen 28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENK 103 (1187)
T ss_pred CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCc
Confidence 3456779999999999999999999999998899999854 4577889999999999999 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+||+.|||.||-....+..- ..+.+.++..+++|++.||.|||+++|||||||..|||+ +.+|.|+|+|||++...
T Consensus 104 LwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~---TldGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL---TLDGDIRLADFGVSAKN 180 (1187)
T ss_pred eEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE---EecCcEeeecccccccc
Confidence 99999999999887766554 468999999999999999999999999999999999999 67788999999999876
Q ss_pred CCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 283 RPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 283 ~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
.........+ -+.|||...+...+.......|++..++|.-
T Consensus 181 ~~t~qkRDsF-IGTPYWMAPEVvmCET~KD~PYDykaDiWSl 221 (1187)
T KOG0579|consen 181 KSTRQKRDSF-IGTPYWMAPEVVMCETFKDQPYDYKADIWSL 221 (1187)
T ss_pred hhHHhhhccc-cCCcccccchheeeccccCCCchhhhhHHhh
Confidence 5443332222 2349999876666666777888888999953
No 111
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=236.95 Aligned_cols=166 Identities=23% Similarity=0.432 Sum_probs=146.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|.++.+||+|+||.||+|.++.+|..+|||.+.. +.+++.+..||.||+++ +.|+||++||.|.....+||
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-----~sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWI 105 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-----DTDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWI 105 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-----cchHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEe
Confidence 4569999999999999999999999999999998853 45788999999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||..|+..+.+..+ +.+.+.++..+++..+.||+|||...-||||||..|||| +.+|..||+|||+|..+.+.
T Consensus 106 VMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred ehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhh
Confidence 99999999999998754 679999999999999999999999999999999999999 67889999999999887654
Q ss_pred CceeeeeeccCCCCcch
Q 040003 286 LTFRVWLRLHFLFFQKQ 302 (489)
Q Consensus 286 ~~~~~~~~~~ypf~~~~ 302 (489)
...+... -+.|||...
T Consensus 183 MAKRNTV-IGTPFWMAP 198 (502)
T KOG0574|consen 183 MAKRNTV-IGTPFWMAP 198 (502)
T ss_pred HHhhCcc-ccCcccccH
Confidence 4332211 234899873
No 112
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=1.7e-28 Score=242.53 Aligned_cols=182 Identities=23% Similarity=0.308 Sum_probs=142.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH-HHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR-IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.+ +||||+++++++...+.+|+|||||.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36999999999999999999999999997654333333344555554 45667 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce--ee
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF--RV 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~--~~ 290 (489)
+|+|.+++...+.+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++........ ..
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCcccc
Confidence 99999999888889999999999999999999999999999999999999 66788999999999764322111 11
Q ss_pred eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 291 WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.+..| .-+-++.++++.+++.|..+|..
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence 111112 11223447777888888777654
No 113
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=3.6e-28 Score=245.76 Aligned_cols=241 Identities=19% Similarity=0.241 Sum_probs=168.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCC-----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT-----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|.++++||+|+||.||+|.+... +..||||++... ......+.+.+|+++|+++..|||||++++++.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT--ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC--CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 35699999999999999999987533 346999998643 23445578899999999995599999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
...|||||||++|+|.+++...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 9999999999999999988542
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC
Q 040003 224 --------------------------------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 224 --------------------------------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~ 265 (489)
..+++..+..++.|++.||.|||+.+|+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill--- 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL--- 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE---
Confidence 135667778899999999999999999999999999999
Q ss_pred CCCCCeEEEeeccccccCCCCceee---------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-
Q 040003 266 QEEAPLKTIDFGLSMFFRPGLTFRV---------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV- 326 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~~~~~~~~~---------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~- 326 (489)
+.++.+||+|||+++.+........ +....| .-+-++.+.++.+++. |..+++...-....
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 5677899999999987643221110 011111 1112344777777764 66666532211000
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.+. +.+++..|++.|.+..++...|.++
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~l---i~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 351 NKIKSGYRMAKPDHATQEVYDI---MVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHhcCCCCCCCccCCHHHHHH---HHHHCccCHhHCcCHHHHHHHHHHH
Confidence 000000000111222222222 3356788888899999988888765
No 114
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=1.6e-27 Score=246.96 Aligned_cols=187 Identities=20% Similarity=0.275 Sum_probs=144.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc-----CCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA-----GHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~~~~~ 201 (489)
.+.|++.++||+|+||+||+|.+..+++.||||+++.. .........|+++++.+. +|.+|+.++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 46799999999999999999999999999999998642 122345567888888772 234589999988764
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCC-------------
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQ------------- 266 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~------------- 266 (489)
.++|||||++ |++|.+++.+.+.+++..+..++.||+.||.|||+ .|||||||||+|||+...+
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 5789999998 77999999888899999999999999999999998 5999999999999995422
Q ss_pred CCCCeEEEeeccccccCCCCceeeeeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 267 EEAPLKTIDFGLSMFFRPGLTFRVWLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+.+||+|||++........ ..+.+..| + -+-++.++++.+++.|+..|..
T Consensus 283 ~~~~vkl~DfG~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERHSRT-AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred CCceEEECCCCccccCccccc-cccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 123599999998865432211 11122222 1 1234568899999999988864
No 115
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=3.3e-28 Score=238.68 Aligned_cols=186 Identities=24% Similarity=0.279 Sum_probs=148.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+.++||+|+||.||+|++..+++.||+|.+..... ......+.+|+++++++ +||||+++++++...+..|+|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEE
Confidence 459999999999999999999999999999999875432 12234567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+ +|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCc
Confidence 999975 888877654 357889999999999999999999999999999999999 667889999999997653322
Q ss_pred cee--eeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 287 TFR--VWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~~~--~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ...+..| .+ +-++.+.++.+++.|...|+..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 208 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS 208 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 111 1111111 11 1234477888888888877654
No 116
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96 E-value=4.9e-28 Score=240.40 Aligned_cols=186 Identities=23% Similarity=0.319 Sum_probs=148.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----Ce
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-----VA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~~ 203 (489)
+|++.++||+|+||.||+|++..+++.||||++.... ........+.+|+.+|+.+ +||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence 4899999999999999999999999999999986432 2233445788999999999 899999999988543 35
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+|||||. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 899999995 6899998887889999999999999999999999999999999999999 778899999999998653
Q ss_pred CCCcee-----eeeeccC-----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLTFR-----VWLRLHF-----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~~~-----~~~~~~y-----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... .+.+..| . -+-++.++++.+++.|+..|+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 221110 0111111 1 11235578888999998877653
No 117
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96 E-value=5.2e-28 Score=231.87 Aligned_cols=241 Identities=21% Similarity=0.236 Sum_probs=175.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|++..+++.||||.+.............+.+|+++++.+ +||||+++++++.+.+..|+||
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEE
Confidence 599999999999999999999999999999998765445556667789999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceeccc
Confidence 99999999887753 2447889999999999999999999999999999999999 6678899999999987653
Q ss_pred CCceee------------e-eeccCC--CCcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcch-hhhhhccHHHH
Q 040003 285 GLTFRV------------W-LRLHFL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDR-VIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~------------~-~~~~yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~ 345 (489)
...... + ....+. -+.++.+.++.+++.|..++....-.... .+...... ......+.+-.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLR 238 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHH
Confidence 221110 0 011111 11123467778888877766432111000 00000000 00011122212
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
+. +-++++.+++.|++..|+...++.+.
T Consensus 239 ~l---i~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 239 EL---VSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HH---HHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 22 22577889999999999988887764
No 118
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=5.3e-28 Score=217.27 Aligned_cols=149 Identities=24% Similarity=0.351 Sum_probs=128.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+.+..||.|+.|+|++++.+.+|...|||.+.+. ...++.+++++.+.++....+.|.||+.+|||..+..++|.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 45567899999999999999999999999999765 4566778999999998877568999999999999999999999
Q ss_pred ecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 210 LCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 210 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
.|. ..+..+++. .+.++|..+-.+...++.||.||.+ +||||||+||+|||+ |+.|++||||||++.++.+
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeec
Confidence 983 344444433 3679999999999999999999964 589999999999999 8999999999999987654
No 119
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.96 E-value=1.5e-27 Score=228.74 Aligned_cols=239 Identities=13% Similarity=0.109 Sum_probs=167.5
Q ss_pred cceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
..|++.+.||+|+||.||+|.+. ..+..||+|.++.. ........+.+|+.+++.+ +||||+++++++......
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG--CSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC--CCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCc
Confidence 35999999999999999999865 34568999998653 2334456788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCccccccc
Confidence 9999999999999988764 578999999999999999999999999999999999999 667889999999876543
Q ss_pred CCCceee--------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHH
Q 040003 284 PGLTFRV--------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 345 (489)
....... +....| .-+-++.+.++.+++. |..+|......... .+.................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLH 238 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHH
Confidence 2211110 001111 1112234666666553 66555432111000 0000000001111222211
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+. +.+++..+++.+.+.+++...|.++
T Consensus 239 ~l---i~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QL---MLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HH---HHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11 2357788899999999998887653
No 120
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=5.4e-28 Score=234.95 Aligned_cols=186 Identities=27% Similarity=0.401 Sum_probs=154.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+++|+++ +||||+++++++.+....|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEE
Confidence 489999999999999999999999999999999765444445567889999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~~- 156 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRTY- 156 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCCCC-
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999987754421
Q ss_pred eeeeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 289 RVWLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| + -+-.+.+.++.+++.|..+|..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD 200 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 11111111 1 1112346677788888776654
No 121
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96 E-value=3.1e-28 Score=238.14 Aligned_cols=185 Identities=21% Similarity=0.260 Sum_probs=148.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|.+..+++.||+|++..... ......+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEE
Confidence 569999999999999999999999999999999865432 12234567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||. ++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCC
Confidence 99995 5787777654 568999999999999999999999999999999999999 677889999999997543211
Q ss_pred ce--eeeeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 287 TF--RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~--~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ....+..| .+ +-++.+.++.+++.|..+|.+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 10 01111111 11 223457888888888888764
No 122
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=1.2e-27 Score=230.91 Aligned_cols=180 Identities=23% Similarity=0.326 Sum_probs=145.0
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||.||+++++.+|+.||+|.+.............+..|+++++++ +||||+++++++.+...+|+||||+.|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999999999999999999999764443333344566799999999 89999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-ee
Q 040003 216 LFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-WL 292 (489)
Q Consensus 216 L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~ 292 (489)
|.+++...+ .+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++..+..+..... ..
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCC
Confidence 988876543 47888889999999999999999999999999999999 6678899999999987754432221 11
Q ss_pred eccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 293 RLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 293 ~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 1111 11223457888888888877653
No 123
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=1.8e-27 Score=233.00 Aligned_cols=149 Identities=28% Similarity=0.440 Sum_probs=136.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+++++.+ +||||+++++++.....+|+||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence 488999999999999999999999999999998765433344566788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||++|++|.+++...+.+++..+..++.+++.||.|||++||+||||||+||++ +..+.+||+|||+++.
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKI 150 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999874
No 124
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.96 E-value=2.9e-27 Score=226.55 Aligned_cols=241 Identities=20% Similarity=0.236 Sum_probs=177.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+++++++ +|+||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence 3599999999999999999999999999999998765444555567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+++++|..++.. ...+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||++..+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeecc
Confidence 999999999998854 2457899999999999999999999999999999999999 677889999999998764
Q ss_pred CCCcee--eeeecc-----------CC--CCcchhHHHHHHHhcccccCCCCCCCCCCCCCC----CcchhhhhhccHHH
Q 040003 284 PGLTFR--VWLRLH-----------FL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPP----IGDRVIAESLSEEE 344 (489)
Q Consensus 284 ~~~~~~--~~~~~~-----------yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 344 (489)
...... ...... |. -+.++.+.++.+++.|..++............. ..........+.+.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL 237 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHH
Confidence 332111 111111 11 122345778888888877765432110000000 00000001122222
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+. +-++++.+++.|++..++...|+.+
T Consensus 238 ~~~---i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 238 RDL---VSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred HHH---HHHHcCCCcccCCCHHHHHHHHHHh
Confidence 222 2357788899999999998888764
No 125
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.96 E-value=2.4e-27 Score=253.79 Aligned_cols=151 Identities=25% Similarity=0.357 Sum_probs=133.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++.++||+|+||.||+|++..+++.||+|++...........+++.+|+++++++ +||||+++++++.+.+..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEE
Confidence 3599999999999999999999999999999999765444445567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 208 MELCAGGELFDRIIQR-----------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
||||+||+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999999999988642 124456678899999999999999999999999999999 67788999999
Q ss_pred cccccc
Q 040003 277 GLSMFF 282 (489)
Q Consensus 277 Gla~~~ 282 (489)
|+|+..
T Consensus 158 GLAk~i 163 (932)
T PRK13184 158 GAAIFK 163 (932)
T ss_pred Ccceec
Confidence 999876
No 126
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.96 E-value=2e-27 Score=230.30 Aligned_cols=186 Identities=25% Similarity=0.345 Sum_probs=151.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.+ +|+||+.+++.+.+....|+|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEEE
Confidence 77788999999999999999999999999998765544444456678899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+.|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +..+.++|+|||++.....+..
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCcc
Confidence 99999999888544 358899999999999999999999999999999999999 6678899999999987654332
Q ss_pred eee-eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... +.+..| . -+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 211 111111 1 1223447777888888777753
No 127
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.3e-27 Score=246.43 Aligned_cols=235 Identities=18% Similarity=0.227 Sum_probs=170.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV----- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 202 (489)
++|.+.+.||+|+||+||+|++..+++.||||++..... .......+.+|+.+|..+ +|+||+++++.+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCcc
Confidence 569999999999999999999999999999999976543 445667788999999999 8999999988775432
Q ss_pred ---eEEEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 ---AVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
.+++||||+.+|+|.+++..+ ..+++..+..++.|++.||.|||++|||||||||+|||+ +.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCEEEEe
Confidence 378999999999999988653 468999999999999999999999999999999999999 6678899999
Q ss_pred eccccccCCCCce----eeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhh
Q 040003 276 FGLSMFFRPGLTF----RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIA 337 (489)
Q Consensus 276 FGla~~~~~~~~~----~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 337 (489)
||+++.+...... ....+..| ++. -++.+.++.+++.|..+|......... .+.......+.
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 266 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLP 266 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 9999876432111 11111122 111 234477888888888777643221100 00000000112
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
..++.+-...+. .++..|++.|++..++..
T Consensus 267 ~~~~~~l~~li~---~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 267 PSISPEMQEIVT---ALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCHHHHHHHH---HHcccChhhCcCHHHHHh
Confidence 233333333333 456778889999988754
No 128
>PHA02988 hypothetical protein; Provisional
Probab=99.96 E-value=4.7e-27 Score=227.51 Aligned_cols=233 Identities=13% Similarity=0.087 Sum_probs=168.4
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~lv~e 209 (489)
..||+|++|.||+|.. +|+.||+|.+...........+.+.+|+.+|+++ +|||||++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEE
Confidence 4699999999999987 6889999999765444444467788999999999 89999999999877 457899999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||.+|+|.+++...+.++......++.+++.|+.|||+ .+++||||||+|||+ +.++.+||+|||+++........
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~~~ 179 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPPFK 179 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccccc
Confidence 99999999999888889999999999999999999998 599999999999999 67788999999999865432211
Q ss_pred e---------eeeec---cC--CCCcchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchhhhhhccHHHHHHHHHHH
Q 040003 289 R---------VWLRL---HF--LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 289 ~---------~~~~~---~y--pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
. .++.+ .| .-+-++.+.++.+++.|..+|......... .+ ............+. ....+ +-
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~l~~l--i~ 256 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPL-EIKCI--VE 256 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcH-HHHHH--HH
Confidence 0 02211 12 222345578888888888777643211000 00 00000001111222 22222 12
Q ss_pred hhhcCCCCCCccHHHHHHHHHHh
Q 040003 353 KMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+++..|++.|.+.+|+...|..+
T Consensus 257 ~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 257 ACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HHhcCCcccCcCHHHHHHHHHHH
Confidence 56778888889999988877665
No 129
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=7.8e-28 Score=243.06 Aligned_cols=142 Identities=20% Similarity=0.365 Sum_probs=129.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
...|++++.||+|+||.||+|++..+++.||+|.... ..+.+|+++|++| +|||||+++++|......++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEE
Confidence 3569999999999999999999999999999997532 3467899999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||++. ++|..++.....+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+|+..
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFP 232 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCccccc
Confidence 999995 6899998887889999999999999999999999999999999999999 66788999999999754
No 130
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.95 E-value=1.8e-27 Score=232.85 Aligned_cols=148 Identities=24% Similarity=0.363 Sum_probs=129.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcE--EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKE--FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|++.+.||+|+||.||+|.+..++.. +|+|.+.. .........+.+|+.++.++.+||||+++++++...+..|+
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 488999999999999999998877765 46666542 23345567788999999999779999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC
Q 040003 207 VMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~ 270 (489)
||||+++++|.+++...+ .+++..+..++.|++.|++|||++||+||||||+|||+ +.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCCc
Confidence 999999999999986543 46888999999999999999999999999999999999 66788
Q ss_pred eEEEeeccccc
Q 040003 271 LKTIDFGLSMF 281 (489)
Q Consensus 271 ~kl~DFGla~~ 281 (489)
+||+|||++..
T Consensus 163 ~kl~dfg~~~~ 173 (303)
T cd05088 163 AKIADFGLSRG 173 (303)
T ss_pred EEeCccccCcc
Confidence 99999999864
No 131
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95 E-value=1.5e-27 Score=240.23 Aligned_cols=185 Identities=22% Similarity=0.304 Sum_probs=151.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----eE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-----AV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~ 204 (489)
|++++.||+|+||+||+|.+..+++.||+|.+... ........++.+|+.+|+.+ +||||+++++++.... ..
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceE
Confidence 77889999999999999999999999999998643 22334556788999999999 8999999999998776 89
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+. ++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeeccc
Confidence 99999996 5888888777889999999999999999999999999999999999999 6778999999999986543
Q ss_pred CCcee---eeeecc------------C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 285 GLTFR---VWLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~~~---~~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..... .+.+.. | ..+-++.++++.+++.|+..|...
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 22110 011111 2 122345588899999998888653
No 132
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=1.9e-27 Score=227.98 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=175.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.+|||.+.............+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEE
Confidence 488899999999999999999999999999988765444455567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++.. ...+++..+..++.+++.||.|||++||+|+||||+||++ +.++.+||+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhcccc
Confidence 99999999998763 3458999999999999999999999999999999999999 6678899999999987654
Q ss_pred CCceee--eeeccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCc---ch-hhhhhccHHHH
Q 040003 285 GLTFRV--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIG---DR-VIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~ 345 (489)
...... .....| + -+..+.+.++.+++.|..+|...........+... .. ......+.+-.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHH
Confidence 322111 111111 1 12234477888888887776432211000000000 00 00011222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.. +-++++.|++.|+++.++...++++
T Consensus 239 ~l---i~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 239 QL---VNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HH---HHHhcCCCcccCCCHHHHHHHHhhh
Confidence 22 2256788889999999988887765
No 133
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=3.9e-27 Score=228.37 Aligned_cols=186 Identities=24% Similarity=0.336 Sum_probs=150.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|+..+.||+|+||+||+|.+..+++.||+|.+.+...........+.+|+++|+.+ +|+||+.+++++...+..|+|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEE
Confidence 67788999999999999999999999999999765544444456678899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+.+++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCCc
Confidence 99999998887654 358999999999999999999999999999999999999 6677899999999976543322
Q ss_pred eee-eee-----------ccCC--CCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WLR-----------LHFL--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~~-----------~~yp--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... +.+ ..|- -+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 111 111 1111 1123447777888888777653
No 134
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=1.8e-27 Score=226.13 Aligned_cols=230 Identities=20% Similarity=0.272 Sum_probs=163.3
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|.+..+++.||+|.+... ........+.+|+++++.+ +||||+++++++......|+||||+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 3699999999999999999999999987543 2344556789999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 214 GELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 214 g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.....+.....
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccCC
Confidence 99999987644 58899999999999999999999999999999999999 6677899999999986543221100
Q ss_pred eee--ccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHH-
Q 040003 291 WLR--LHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMF- 352 (489)
Q Consensus 291 ~~~--~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F- 352 (489)
... ..| .+ +-++.+.++.+++. |..++......... .+............+.. +.+++
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~li~ 230 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDA----VYRLME 230 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHH----HHHHHH
Confidence 000 001 01 11234677777775 66555422110000 00000000011112222 22222
Q ss_pred hhhcCCCCCCccHHHHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~ 373 (489)
+++..+++.|++.+|+..+|+
T Consensus 231 ~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 231 RCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHcCCChhhCcCHHHHHHHHh
Confidence 667788888999988877764
No 135
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95 E-value=1.9e-27 Score=244.02 Aligned_cols=182 Identities=22% Similarity=0.278 Sum_probs=140.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
..|+++++||+|+||+||+|.+..+++.||||++.... ....+|+.+|+.+ +|||||+++++|...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeecccccCC
Confidence 46999999999999999999999999999999885431 2345799999999 899999999887432
Q ss_pred --CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 202 --VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..+++|||||++ +|.+++.. ...+++..++.++.||+.||.|||++|||||||||+|||+.. ..+.+||+|
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL~D 214 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKLCD 214 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceeeec
Confidence 257899999975 67666542 356899999999999999999999999999999999999932 234699999
Q ss_pred eccccccCCCCceee-e----------eec--cCC--CCcchhHHHHHHHhcccccCCCC
Q 040003 276 FGLSMFFRPGLTFRV-W----------LRL--HFL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 276 FGla~~~~~~~~~~~-~----------~~~--~yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
||+|+.+..+..... + +.+ .|. -+-++.++++.+++.|...|.+.
T Consensus 215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 274 (440)
T PTZ00036 215 FGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQ 274 (440)
T ss_pred cccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987654332111 1 111 121 11234578888898888877654
No 136
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=1.9e-27 Score=250.87 Aligned_cols=149 Identities=30% Similarity=0.493 Sum_probs=127.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE------
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE------ 199 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~------ 199 (489)
....|+.++.||+||||.||+++++-+|+.||||+|.... .......+.+|+.+|++| +|||||+++..|.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcc
Confidence 3456888999999999999999999999999999997653 455667899999999999 8999999987663
Q ss_pred --------------------------------------------------------------------------------
Q 040003 200 -------------------------------------------------------------------------------- 199 (489)
Q Consensus 200 -------------------------------------------------------------------------------- 199 (489)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -------------------------eC--------CeEEEEEeecCCCchHHHHHHcCCC--CHHHHHHHHHHHHHHHHH
Q 040003 200 -------------------------DA--------VAVHVVMELCAGGELFDRIIQRGHY--TERKAADLTRIIVGVVEA 244 (489)
Q Consensus 200 -------------------------~~--------~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~i~~~l~~ 244 (489)
.. ..+||-||||+...|.+++ .++.+ ....++.++++|+.||.|
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI-~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDII-RRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHH-HhcccchhhHHHHHHHHHHHHHHHH
Confidence 00 2478999999886665555 44455 377889999999999999
Q ss_pred HHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 245 lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|+.|||||||||.||+| +.+..|||+|||+|..
T Consensus 713 IH~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATD 746 (1351)
T ss_pred HHhCceeeccCCcceeEE---cCCCCeeecccccchh
Confidence 999999999999999999 7788899999999987
No 137
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.3e-26 Score=237.32 Aligned_cols=143 Identities=21% Similarity=0.318 Sum_probs=127.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++| +|+|||++++++...+..|+|
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEE
Confidence 359999999999999999999999999999996421 2356899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||++. ++|..++... +.+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.+..
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceeccc
Confidence 99995 6888888654 468999999999999999999999999999999999999 6678899999999987643
No 138
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.5e-29 Score=237.15 Aligned_cols=188 Identities=25% Similarity=0.390 Sum_probs=165.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.-++||+||||.||-|+.+.||+.||+|.+.++++.....-...++|-.||.++ +.+.||.+-..|+..+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 4577888999999999999999999999999999888777666667788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|..|.||+|.-+|...| .|++..++.++.+|+.||++||..+||.|||||+|||| |+.|+++|+|+|||..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence 99999999988887776 79999999999999999999999999999999999999 88999999999999999888
Q ss_pred Cceee-eeeccC-----------CCC--cchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV-WLRLHF-----------LFF--QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~-~~~~~y-----------pf~--~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... +.+.+| .|. .+..++++++++.|.-+|..
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 76655 555554 222 13448999999999888764
No 139
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95 E-value=2e-27 Score=233.91 Aligned_cols=239 Identities=15% Similarity=0.177 Sum_probs=167.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcE----EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
..|++.+.||+|+||.||+|.+..++.. ||+|++... ......+.+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence 3599999999999999999998766654 899988532 2344567788999999999 899999999998765 5
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++|+||+.+|+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccc
Confidence 78999999999999998764 458888899999999999999999999999999999999 66778999999999977
Q ss_pred CCCCceeee----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCCC-CCCCcchhhhhhccHH
Q 040003 283 RPGLTFRVW----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKVA-VPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~~----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 343 (489)
......... .+..| ++ +-++.+.++.+++. |..++.+........ +............+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 239 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHH
Confidence 543321110 00011 11 12334667777765 666665432211000 0000000001111222
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.. .-+..++..|++.|.+..++...+..+.
T Consensus 240 ~~---~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 240 VY---MIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred HH---HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 21 2234567778888999999888776653
No 140
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=5.4e-27 Score=229.97 Aligned_cols=185 Identities=19% Similarity=0.237 Sum_probs=152.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++.+..++..+|+|.+... ........+.+|+++++++ +||||+++++++.+.+.+|+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE--IKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc--cCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEe
Confidence 489999999999999999999999999999998643 2344556788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+++++|.+++...+.+++..+..++.|++.||.|||+ .+|+||||||+|||+ +.++.+||+|||++........
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccccc
Confidence 999999999999888889999999999999999999997 699999999999999 6677899999999876543221
Q ss_pred eeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| .-+-++.+.++.+++.|..+|+.
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 111111111 11123457788888888887753
No 141
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.95 E-value=2.3e-27 Score=229.50 Aligned_cols=238 Identities=19% Similarity=0.226 Sum_probs=170.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||+|.+...+ ..||+|.+... ........+.+|+.+++.+ +||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~--~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN--AEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC--CCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCC
Confidence 35889999999999999999876655 67999988643 2344566789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~ 266 (489)
..|++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~---~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---G 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---c
Confidence 999999999999999998764 457788899999999999999999999999999999999 6
Q ss_pred CCCCeEEEeeccccccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-C
Q 040003 267 EEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-A 327 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~ 327 (489)
.++.+||+|||+++.......... ..+..| .+ +-++.+.++.+++. |..+|.+....+.. .
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 677899999999986543322111 111111 11 11244677777775 65555432211100 0
Q ss_pred CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 328 VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+.+..........+.+-.+. +..+++.|++.|.+..|+...|+.
T Consensus 239 i~~~~~~~~~~~~~~~~~~l---~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRSRQLLPCPEDCPARVYAL---MIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCCCcccCCHHHHHH---HHHHccCChhhCcCHHHHHHHHhc
Confidence 00000001111222222222 236788899999999999888764
No 142
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.95 E-value=4.8e-27 Score=228.16 Aligned_cols=185 Identities=21% Similarity=0.296 Sum_probs=139.8
Q ss_pred ceeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEE-----e
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYE-----D 200 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~-----~ 200 (489)
.|++.+.||+|+||+||+|++.. +++.||+|.+...... ......+.+|+.+++.+. +||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 59999999999999999999854 4688999998754322 222345667888887763 5999999999885 3
Q ss_pred CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
...+++||||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccc
Confidence 456899999996 5898888653 358899999999999999999999999999999999999 6678899999999
Q ss_pred ccccCCCCceee-eeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 279 SMFFRPGLTFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
++.......... ..+..| .-+-++.+.++.+++.|...|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 987653321111 111111 1222344667777777766654
No 143
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=6.8e-27 Score=234.31 Aligned_cols=187 Identities=19% Similarity=0.302 Sum_probs=147.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|+.+++.+ +||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence 4467999999999999999999999999999999986542 2344556788999999999 8999999999986543
Q ss_pred ---eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 ---AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+|+||||+.+ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~a 170 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 170 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCCc
Confidence 57999999965 5666553 358889999999999999999999999999999999999 67789999999999
Q ss_pred cccCCCCcee-eeeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFR-VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~-~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+......... ...+..| .-+-++.+.++.+++.|...|...
T Consensus 171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 171 RTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 7654322111 1111112 112235578888999888887643
No 144
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95 E-value=3e-27 Score=235.25 Aligned_cols=240 Identities=21% Similarity=0.247 Sum_probs=163.9
Q ss_pred cceeecceeccCCceEEEEEEE-----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE-----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 201 (489)
++|++++.||+|+||.||+|.+ ..+++.||||+++... .......+.+|+.+|.++.+||||+++++++.. .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 5699999999999999999985 3467899999986532 234456788999999999778999999998765 4
Q ss_pred CeEEEEEeecCCCchHHHHHHcC---------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG--------------------------------------------------------- 224 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 224 (489)
..+++|||||.+|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56899999999999999886421
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeee---
Q 040003 225 ----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW--- 291 (489)
Q Consensus 225 ----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~--- 291 (489)
.++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcchhhcCCC
Confidence 25667778899999999999999999999999999999 66788999999999875432221110
Q ss_pred ------------eeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhh
Q 040003 292 ------------LRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKM 354 (489)
Q Consensus 292 ------------~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 354 (489)
....|. -+-++.+.++.+++. |..+++........ .+............+.+. ..-+..+
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~c 318 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---YQTMLDC 318 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHH---HHHHHHH
Confidence 011110 011233666777764 66555432111000 000000000011122221 2233456
Q ss_pred hcCCCCCCccHHHHHHHHHHh
Q 040003 355 IDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 355 ~D~d~~g~i~~~el~~~l~~l 375 (489)
+..|+..|.+..|+...|..+
T Consensus 319 l~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 319 WHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred ccCChhhCcCHHHHHHHHHHH
Confidence 777888888888887777654
No 145
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.95 E-value=4.9e-27 Score=225.74 Aligned_cols=238 Identities=20% Similarity=0.222 Sum_probs=168.0
Q ss_pred eeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe---
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA--- 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~--- 203 (489)
|.+++.||+|+||.||+|.... ++..||+|.+.... ........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence 5678899999999999998765 34789999987543 2345567889999999999 89999999998865544
Q ss_pred ---EEEEEeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 204 ---VHVVMELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 204 ---~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
.++||||+.+|+|..++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence 79999999999999888542 358889999999999999999999999999999999999 667889999
Q ss_pred eeccccccCCCCceee--------------eee-ccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchh
Q 040003 275 DFGLSMFFRPGLTFRV--------------WLR-LHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRV 335 (489)
Q Consensus 275 DFGla~~~~~~~~~~~--------------~~~-~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~ 335 (489)
|||+++.+........ .+. ..+ .-+-++.+.++.+++. |..+|......... .+..-....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9999987654332211 010 111 1222345778888876 66666543211100 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.......+-.+.+. +++..|++.|++..|+...|..+
T Consensus 236 ~~~~~~~~~~~li~---~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMY---SCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHhh
Confidence 11222333333333 46778888889999888877654
No 146
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=1.7e-28 Score=224.16 Aligned_cols=190 Identities=27% Similarity=0.342 Sum_probs=150.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCC----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~ 202 (489)
..|+++..||+|+||.||+|..+.++ +.+|||.++..+-.+ .-.....||+.+++.| +|||||.+..+|.. +.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLREL-KHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCc
Confidence 45999999999999999999766543 378999987543222 2224667999999999 79999999999877 88
Q ss_pred eEEEEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEee
Q 040003 203 AVHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDF 276 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DF 276 (489)
.+|+++||.+. +|.+.|..+ ..++...++.++.||+.|+.|||++=|+||||||+|||+..+ .+.|.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999999976 888888643 358889999999999999999999999999999999999643 35689999999
Q ss_pred ccccccCCCCcee-----eee------------eccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 277 GLSMFFRPGLTFR-----VWL------------RLHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 277 Gla~~~~~~~~~~-----~~~------------~~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+|+.+.....-- ++. ..+| ..+.+..+|||.+++.-++-|..+
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999987543211 122 2334 233455699999999988888654
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=7.4e-27 Score=223.95 Aligned_cols=185 Identities=23% Similarity=0.268 Sum_probs=151.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
...|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEE
Confidence 346999999999999999999999999999999986432 23345678999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecccc
Confidence 99999999999999877889999999999999999999999999999999999999 667889999999998764322
Q ss_pred ceee--eeeccC------------C----CCcchhHHHHHHHhcccccCC
Q 040003 287 TFRV--WLRLHF------------L----FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~~~--~~~~~y------------p----f~~~~~~~~~~~i~~~~~~~~ 318 (489)
.... ..+..| + -+-++.+.++.+++.|..++.
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~ 210 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 1110 111111 1 112345778888888877664
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=8.2e-27 Score=222.98 Aligned_cols=187 Identities=26% Similarity=0.348 Sum_probs=153.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC--HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT--EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+++++++ +||||+++++++.+....|+
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEEE
Confidence 4889999999999999999999999999999987543222 23456788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||+++.+....
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceeccccc
Confidence 99999999999999888889999999999999999999999999999999999999 667889999999997654321
Q ss_pred ceee---------------eeec-cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV---------------WLRL-HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~---------------~~~~-~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ++.+ .+ .-+-++.+.++.+++.|+.+|..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 1100 1111 11 11223457888999998877653
No 149
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.95 E-value=4.2e-27 Score=225.28 Aligned_cols=236 Identities=19% Similarity=0.214 Sum_probs=172.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+++++.+ +||||+++++++.....+++||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEEE
Confidence 488899999999999999999999999999998643 23456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+.+++|.+++... ..+++..+..++.|++.+|.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccce
Confidence 999999999998654 357888999999999999999999999999999999999 667889999999998765432
Q ss_pred ceee---eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 287 TFRV---WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
.... .....| ++ +-++.+.++.+++. |..+++........ .+............+.+..+.+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 238 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELM 238 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 2110 001112 11 11244778888886 77776543221100 0000000011112223322222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-++++.|++.|++..++.+.|..+
T Consensus 239 ---~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 ---RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---HHHccCCcccCCCHHHHHHHHHhh
Confidence 266778888999999998877653
No 150
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.95 E-value=6e-27 Score=226.12 Aligned_cols=237 Identities=21% Similarity=0.238 Sum_probs=166.6
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.+.||+|+||.||+|.+.. +++.||+|.+.... .....+.+.+|+++|+.+ +|+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNF-QHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCC
Confidence 358899999999999999998753 46789999986532 233457899999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG--------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
..|+||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence 9999999999999999987542 36788899999999999999999999999999999999 667
Q ss_pred CCeEEEeeccccccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVP 329 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~ 329 (489)
+.+||+|||+++.......... .....| ++ +-++.+.++.+++. |..+|....-.... .+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 8999999999986533221110 000111 11 11244677777776 76665422110000 000
Q ss_pred CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 330 PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
...........+.+..+. +-+++..|++.|++..|+...|.
T Consensus 239 ~~~~~~~~~~~~~~~~~l---i~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 QGRLLQRPRTCPSEVYDI---MLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cCCcCCCCCCCCHHHHHH---HHHHcCCCcccCCCHHHHHHHhh
Confidence 000000111222222222 23567788888888888877663
No 151
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.95 E-value=1e-26 Score=221.41 Aligned_cols=150 Identities=27% Similarity=0.502 Sum_probs=134.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.++||+|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.+ +|+||+++++++.+...+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 3888999999999999999999999999999986432 234567788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+|||+ +.++.++|+|||++.....
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTS 152 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecc
Confidence 999999999988643 357899999999999999999999999999999999999 6678899999999987643
No 152
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.95 E-value=5e-27 Score=232.94 Aligned_cols=240 Identities=21% Similarity=0.267 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 201 (489)
++|++.+.||+|+||.||+|++.. +++.||+|++.... .....+.+.+|+.++.++.+|+||+++++++.. .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 469999999999999999997543 45789999986432 234456788999999999779999999998764 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
..++++|||+.+++|.+++...
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 6789999999999999988542
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC
Q 040003 224 ---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF 296 (489)
Q Consensus 224 ---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y 296 (489)
..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+........ .....|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 256788899999999999999999999999999999999 5677899999999987643221110 001111
Q ss_pred ---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCC
Q 040003 297 ---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNS 360 (489)
Q Consensus 297 ---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~ 360 (489)
++ +.++.++++.+++. |..+|......... .+............+.+-.+. +..++..++.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~cl~~~p~ 318 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSI---MLDCWHNNPE 318 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHH---HHHHccCChh
Confidence 11 22345788888875 87776542211100 000000001111122222222 2356778888
Q ss_pred CCccHHHHHHHHHHh
Q 040003 361 GYITLEELKKGLQRV 375 (489)
Q Consensus 361 g~i~~~el~~~l~~l 375 (489)
.|.+.+|+...|..+
T Consensus 319 ~RPs~~ell~~l~~~ 333 (337)
T cd05054 319 DRPTFSELVEILGDL 333 (337)
T ss_pred hCcCHHHHHHHHHHH
Confidence 899999988877654
No 153
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=1.1e-26 Score=224.47 Aligned_cols=183 Identities=21% Similarity=0.273 Sum_probs=142.5
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh--cCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL--AGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||++.+..+++.+|+|.+.+.............+|..+++.+ .+||||+.+++++...+..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999999765443333333344555444433 269999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeeee
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWL 292 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~~ 292 (489)
+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.............
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccCccCcCC
Confidence 99999999888889999999999999999999999999999999999999 677889999999997654322211111
Q ss_pred ecc------------CC--CCcchhHHHHHHHhcccccCCCC
Q 040003 293 RLH------------FL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 293 ~~~------------yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.. |. .+-++.+.++.+++.|..+|...
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 111 11 12234477888888888877543
No 154
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=2.8e-27 Score=225.64 Aligned_cols=148 Identities=38% Similarity=0.650 Sum_probs=133.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++++.||+|+||+||+|.+..+++.||+|++..... .........+|+.+++++ +||||+++++++.+....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI-EEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH-HHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc-cccccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 7889999999999999999999999999999976532 122233445699999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+.+++|.+++...+.++...+..++.|++.||.+||++||+||||||+|||+ +.++.++|+|||++...
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKL 148 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 99999999999878899999999999999999999999999999999999999 67888999999999864
No 155
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.6e-27 Score=245.06 Aligned_cols=233 Identities=22% Similarity=0.342 Sum_probs=169.7
Q ss_pred eeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
....+.||+|+||+||+|.... ....||||.++.. ...+..++|+||+++|..| +|||||+|+|.+..++.+
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPL 564 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCee
Confidence 4557889999999999997543 3467999998654 3455788999999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC
Q 040003 205 HVVMELCAGGELFDRIIQRG--------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~ 270 (489)
|+|+|||..|||.++|..++ .++..+...|+.||+.|++||-++.+|||||-..|+|+ .++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---ccceE
Confidence 99999999999999997542 16778899999999999999999999999999999999 78899
Q ss_pred eEEEeeccccccCCCCceeeeeeccCC-CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcc------------hh--
Q 040003 271 LKTIDFGLSMFFRPGLTFRVWLRLHFL-FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGD------------RV-- 335 (489)
Q Consensus 271 ~kl~DFGla~~~~~~~~~~~~~~~~yp-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------------~~-- 335 (489)
|||+||||++.+...+.+..-...--| -|.. -+.|+.|++.-.+|+|..-..+..+-. ..
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMp-----pEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMP-----PESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCC-----HHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 999999999987766655431011112 1122 123445555555555533221100000 00
Q ss_pred ---------hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 336 ---------IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 336 ---------~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+++... ++..| +-.++..++..|.+..|+...|+...
T Consensus 717 ~i~~g~lL~~Pe~CP~-~vY~L--M~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 717 CIRAGQLLSCPENCPT-EVYSL--MLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHHcCCcccCCCCCCH-HHHHH--HHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 0111122 22222 23567788889999999999988865
No 156
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95 E-value=1.5e-26 Score=223.46 Aligned_cols=181 Identities=21% Similarity=0.226 Sum_probs=147.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|++..+++.||+|.+.... .......+.+|+++++++ +||||+++++++......++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEE
Confidence 4788899999999999999999999999999986542 334456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||+ +.++.+||+|||++..+......
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~~~~ 151 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNSIAK 151 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceeccccccc
Confidence 99999988644 357889999999999999999999999999999999999 67788999999999876443221
Q ss_pred eeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 289 RVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| .-+-++.+.++.+++.|..+|..
T Consensus 152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 11111111 11223457888889888887753
No 157
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=5.3e-27 Score=227.39 Aligned_cols=233 Identities=18% Similarity=0.200 Sum_probs=170.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||.||+|.+..+++.||+|.+... ........+.+|+.+++++ +||||+++++++...+..|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEE
Confidence 488999999999999999999999999999998643 2344557888999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||++++|..++... ..+++..+..++.+++.||.|||+ .||+||||||+||++ +.++.+||+|||++..+..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCcccccC
Confidence 999999998877653 378999999999999999999997 599999999999999 6678899999999976643
Q ss_pred CCceeeeeeccC-------------------CCCcchhHHHHHHHhcccccCCCCCCCCCC-C---CCCCcchhhhhhcc
Q 040003 285 GLTFRVWLRLHF-------------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-A---VPPIGDRVIAESLS 341 (489)
Q Consensus 285 ~~~~~~~~~~~y-------------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 341 (489)
...........| .-+-++.+.++.+++.|..+|....+.... . +.......+...++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd06622 156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS 235 (286)
T ss_pred CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence 222111111111 012234578888999998887654322110 0 00000001111233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+....+. +++..+++++++.+++..
T Consensus 236 ~~~~~li~---~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 236 DDAQDFVA---KCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHH---HHcccCcccCCCHHHHhc
Confidence 33333333 456677888888877754
No 158
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=1.9e-26 Score=223.10 Aligned_cols=236 Identities=18% Similarity=0.167 Sum_probs=165.0
Q ss_pred ceeecceeccCCceEEEEEEEc----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEK----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.|++.+.||+|+||+||+|... .+++.||+|.+... ........+.+|+++++.+ +||||+++++++......
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCce
Confidence 4888999999999999999853 45678999998643 3345557788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 205 HVVMELCAGGELFDRIIQRG-----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
|+||||+.+++|.+++.... .+++..+..++.+++.||.|||++||+||||||+|||+ +.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---cC
Confidence 99999999999999885332 36778888999999999999999999999999999999 66
Q ss_pred CCCeEEEeeccccccCCCCceee--------------eee-ccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV--------------WLR-LHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~--------------~~~-~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||+++.......... ++. ..| --+-++.+.++.+++. |..+|....-.... .+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 77899999999987643321110 000 111 0111234667777776 66555332100000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
............+.+....+ -.+++.|+..|++..++...|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li---~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 240 RKRQLLPCSEDCPPRMYSLM---TECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HcCCcCCCCCCCCHHHHHHH---HHHcccCcccCcCHHHHHHHhh
Confidence 00000001112222222222 2567888899999998877664
No 159
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.95 E-value=9.1e-27 Score=226.54 Aligned_cols=153 Identities=27% Similarity=0.418 Sum_probs=133.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||++.+.... ..+|+|.+... ........+.+|+.+++.+.+|+||+++++++...+
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC--CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 45999999999999999999876443 78999988643 234455678899999999967999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~ 266 (489)
.+|+||||+.+|+|..++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~---~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---T 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE---c
Confidence 999999999999999998642 357888999999999999999999999999999999999 6
Q ss_pred CCCCeEEEeeccccccCCC
Q 040003 267 EEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~ 285 (489)
.++.+||+|||+++.+...
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~ 185 (293)
T cd05053 167 EDHVMKIADFGLARDIHHI 185 (293)
T ss_pred CCCeEEeCccccccccccc
Confidence 6788999999999876543
No 160
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95 E-value=3.2e-26 Score=219.44 Aligned_cols=150 Identities=24% Similarity=0.379 Sum_probs=133.1
Q ss_pred cceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++.+.||+|+||+||+|.+..+ ...||+|.+... ........+.+|+.+++.+ +||||+++++++......
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG--SSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC--CChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence 3589999999999999999988654 457999988643 2344556788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+++|.+++... +.++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence 9999999999999998664 578999999999999999999999999999999999999 667889999999999875
No 161
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=7.8e-27 Score=250.91 Aligned_cols=237 Identities=22% Similarity=0.295 Sum_probs=170.9
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 204 (489)
.+.|+++++||+|+||+||+|.+..++..||+|++..... .......+.+|+.+|+.| +|||||+++++|.+ ...+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCEE
Confidence 4569999999999999999999999999999999876543 344567889999999999 89999999999854 4579
Q ss_pred EEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCCEeeeeC--------
Q 040003 205 HVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSL-------GVMHRDLKPENFLFINQ-------- 265 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~-------~iiHrDlKp~Nill~~~-------- 265 (489)
|||||||.+|+|.++|... +.+++..++.|+.||+.||.|||+. +||||||||+||||...
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999988652 5799999999999999999999985 49999999999999532
Q ss_pred ------CCCCCeEEEeeccccccCCCCceee-eeecc-------------C--CCCcchhHHHHHHHhcccccCCCCCCC
Q 040003 266 ------QEEAPLKTIDFGLSMFFRPGLTFRV-WLRLH-------------F--LFFQKQRQSVLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 266 ------~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~-------------y--pf~~~~~~~~~~~i~~~~~~~~~~~~~ 323 (489)
+....+||+|||++..+........ +.+.. | ..+.++.++++.+++.|..+|....-.
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~ 249 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF 249 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH
Confidence 2234599999999987643221111 11111 1 123356688999999999888532110
Q ss_pred CCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 324 DKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 324 ~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
... .+... ........+.+-...|. .++..++..+++..|+.
T Consensus 250 ~qli~~lk~~-p~lpi~~~S~eL~dLI~---~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 250 SQLISELKRG-PDLPIKGKSKELNILIK---NLLNLSAKERPSALQCL 293 (1021)
T ss_pred HHHHHHHhcC-CCCCcCCCCHHHHHHHH---HHhcCChhHCcCHHHHh
Confidence 000 00000 00000112222222222 56788888999998876
No 162
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2e-28 Score=231.06 Aligned_cols=188 Identities=24% Similarity=0.291 Sum_probs=160.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|..+.+||+|+||+|.+|..+.+.+.||||++++..+....+++--..|-++|+-..+-|.++++..+|+..+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 47888999999999999999999999999999998877777778888889999987767889999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.||+|.-++.+-|++.+..+..++..|+.||-+||++|||.||||.+|||| +.+|++||+|||+++.-.-+...
T Consensus 430 EyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCcc
Confidence 999999999999999999999999999999999999999999999999999999 88999999999999865433332
Q ss_pred ee--eeecc-----------C----CCCcchhHHHHHHHhcccccCCCCC
Q 040003 289 RV--WLRLH-----------F----LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 289 ~~--~~~~~-----------y----pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+. ..+.. | .||. .+.++.+++.|+.+|.++.
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa--~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWA--FGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHH--HHHHHHHHHcCCCCCCCCC
Confidence 22 22222 2 3333 3667777777777777654
No 163
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.95 E-value=1.2e-26 Score=222.58 Aligned_cols=236 Identities=23% Similarity=0.317 Sum_probs=169.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC---HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT---EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
|+..+.||+|+||.||+|.+..+++.||+|++....... ....+.+.+|+.+++.+ +|+||+++++++.+.+..++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEEE
Confidence 778899999999999999999999999999987543221 23457889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGla~~~~~~ 285 (489)
||||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.+ ..+||+|||++..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~---~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI---DSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEEcccccccccccc
Confidence 99999999999999887889999999999999999999999999999999999999 434 35999999999876543
Q ss_pred Ccee------eeeeccC-----------C--CCcchhHHHHHHHhcccccCCCCCCCCCCC-CCCCcchhhhhhccHHHH
Q 040003 286 LTFR------VWLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPGSLWPDKVA-VPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 286 ~~~~------~~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 345 (489)
.... .+.+..| . -+-++.+.++.+++.|..+|....+..... +...........+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 1100 0111111 1 112344778888888888775433221110 000000000011111111
Q ss_pred HHHHHHH-hhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMF-KMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F-~~~D~d~~g~i~~~el~ 369 (489)
..+.+++ ++++.+++.|++..|+.
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHh
Confidence 2233333 56778888888888764
No 164
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.9e-27 Score=228.89 Aligned_cols=233 Identities=19% Similarity=0.249 Sum_probs=174.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+||.+.||++..- +...||+|.+... ..+...+..+++||.+|.+|++|.+||+|++|-..++.+|+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4999999999999999999754 4457787776543 3567778899999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHY-TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||- ..+|...|.++... +...++.++.|++.++.++|.+||||.||||+|+|+. .|.+||+|||+|..+....+
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred ecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCcccc
Confidence 974 56999999877554 4468889999999999999999999999999999994 57899999999998876543
Q ss_pred ee----eeeeccC------------------------CCCcchhHHHHHHHhcccccCCCCC--CCCCCCCCCCcchhhh
Q 040003 288 FR----VWLRLHF------------------------LFFQKQRQSVLQTRLVRNLNEPGSL--WPDKVAVPPIGDRVIA 337 (489)
Q Consensus 288 ~~----~~~~~~y------------------------pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 337 (489)
-- .+++..| |-+.|+-+||++.++.|+.+|-.-. |....++....-.+-.
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ief 594 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEF 594 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccc
Confidence 21 1444444 5566777999999999998886432 2111111111111111
Q ss_pred hhccHHH-HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 338 ESLSEEE-IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 338 ~~~~~~~-~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
..+++.. +-.+ +=.|+-.|++.|++..||.+
T Consensus 595 p~~~~~~~li~~--mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 595 PDIPENDELIDV--MKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cCCCCchHHHHH--HHHHHhcCcccCCCcHHHhc
Confidence 1122211 2222 22567788888999999854
No 165
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.95 E-value=3.3e-26 Score=222.15 Aligned_cols=238 Identities=20% Similarity=0.219 Sum_probs=168.4
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..|.+.+.||+|+||.||++.+. .++..+|+|.+... .......+.+|+++++++ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence 45899999999999999999853 34567999988542 344567789999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG-------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
..|+||||+.+++|.+++...+ .+++..+..++.|++.||+|||++||+||||||+|||+ +.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCC
Confidence 9999999999999999987543 38999999999999999999999999999999999999 6678
Q ss_pred CeEEEeeccccccCCCCceee--------------eee-ccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCC
Q 040003 270 PLKTIDFGLSMFFRPGLTFRV--------------WLR-LHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPP 330 (489)
Q Consensus 270 ~~kl~DFGla~~~~~~~~~~~--------------~~~-~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~ 330 (489)
.+||+|||+++.......... ++. ..+. .+-++.+.++.+++. |..+|....-.... .+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 899999999986543322111 011 1111 112344677777776 66655422110000 0000
Q ss_pred CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 331 IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..........+.+ +. .-+.+++..|+..|++..|+...|..+
T Consensus 238 ~~~~~~~~~~~~~-l~--~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 238 GRVLQRPRTCPKE-VY--DLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred CCcCCCCCCCCHH-HH--HHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 0000011122222 11 123367788888889998887777665
No 166
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=1.3e-26 Score=226.39 Aligned_cols=185 Identities=23% Similarity=0.272 Sum_probs=147.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|++..+++.||+|.+..... ......+.+|+.+++.+ +||||+++++++......|+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999865432 22234567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+. ++|..++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCC
Confidence 99997 5888887654 468899999999999999999999999999999999999 667889999999997653221
Q ss_pred ce--eeeeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 287 TF--RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~--~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ....+..| ++ +-++.+.++.+++.|...|+.
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 11111111 11 123446778888888877754
No 167
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=5.2e-27 Score=251.90 Aligned_cols=153 Identities=27% Similarity=0.430 Sum_probs=140.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+||+||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++++.....+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEE
Confidence 4599999999999999999999999999999999876555566677899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||.|++|.+++...+.+++..++.++.||+.||.|||.+|||||||||+|||+ +.++.+||+|||+++....
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSKVTLN 156 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCccccC
Confidence 9999999999999887889999999999999999999999999999999999999 6678899999999987643
No 168
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95 E-value=9.6e-27 Score=226.95 Aligned_cols=238 Identities=18% Similarity=0.177 Sum_probs=166.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc--EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK--EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|++.+.||+|+||.||+|+...++. .+++|.++. .......+.+.+|++++.++.+||||+++++++......|+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE--FASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc--cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 58999999999999999999877765 468887753 23344567789999999999679999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC
Q 040003 207 VMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~ 270 (489)
||||+++++|.+++.... .+++..+..++.|++.||+|||++||+||||||+|||+ +.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCCe
Confidence 999999999999986532 47788999999999999999999999999999999999 66788
Q ss_pred eEEEeeccccccCCCCcee-e-----------eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcch
Q 040003 271 LKTIDFGLSMFFRPGLTFR-V-----------WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDR 334 (489)
Q Consensus 271 ~kl~DFGla~~~~~~~~~~-~-----------~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~ 334 (489)
+||+|||++.......... . .....|. -+-++.+.++.+++. |..+|......... .+......
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~ 237 (297)
T cd05089 158 SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM 237 (297)
T ss_pred EEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9999999986432110000 0 0011110 111244777888875 77766543221100 00000000
Q ss_pred hhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 335 ~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.....++.+-.+. +.+++..++..|.+.+++...|..
T Consensus 238 ~~~~~~~~~~~~l---i~~~l~~~p~~Rp~~~~i~~~l~~ 274 (297)
T cd05089 238 EKPRNCDDEVYEL---MRQCWRDRPYERPPFAQISVQLSR 274 (297)
T ss_pred CCCCCCCHHHHHH---HHHHcCCChhhCcCHHHHHHHHHH
Confidence 0111222222222 336778888889999888666544
No 169
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.95 E-value=2e-26 Score=219.53 Aligned_cols=232 Identities=20% Similarity=0.235 Sum_probs=163.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++.... +..+|+|.+..... ....+.+|+.+|+.+ +||||+++++++......|+||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEE
Confidence 48889999999999999998754 56799998764322 235678899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+++|+|.+++... +.+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||+++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCce
Confidence 999999999988653 568899999999999999999999999999999999999 6678899999999986543222
Q ss_pred eee-------------ee-eccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 288 FRV-------------WL-RLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 288 ~~~-------------~~-~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
... ++ ...|. -+-++.+.++.+++. |..+|....-.... .+............+. .+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~-- 232 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASM-TVYE-- 232 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH-HHHH--
Confidence 111 00 01110 111233667777776 66666432211000 0000000001111122 2211
Q ss_pred HHHhhhcCCCCCCccHHHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l 372 (489)
-+-+++..++++|.+.+|+...|
T Consensus 233 li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHccCCcccCcCHHHHHHhh
Confidence 22357888899999999887654
No 170
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95 E-value=3.6e-27 Score=224.98 Aligned_cols=187 Identities=26% Similarity=0.368 Sum_probs=155.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+++++++ +||||+++++++.+....|+|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEEe
Confidence 88999999999999999999999999999999876555545678899999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
|+.|++|.+++.....+++..+..++.|++.+|.|||++||+|+||||+||++ +.++.++|+|||++..........
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCcccc
Confidence 99999999999877789999999999999999999999999999999999999 677889999999998765442211
Q ss_pred e-eeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 290 V-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 290 ~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. .....| --+-.+.+.++.+++.|..++...
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 202 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGH 202 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCC
Confidence 1 111111 111123467777788777766543
No 171
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.95 E-value=1e-26 Score=225.60 Aligned_cols=185 Identities=21% Similarity=0.297 Sum_probs=141.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEe-----C
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYED-----A 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~-----~ 201 (489)
.|++.+.||+|+||+||+|+++.+++.||+|.+...... ......+.+|+++++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 388999999999999999999999999999998754322 112234567888777763 69999999998864 3
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...++||||+.+ +|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcc
Confidence 468999999975 888887653 348999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceee-eeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 280 MFFRPGLTFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
+.+........ ..+..| .-+-++.+.++.+++.|...|.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 87653322111 111111 1222344777777777766654
No 172
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=9.7e-27 Score=228.04 Aligned_cols=151 Identities=26% Similarity=0.411 Sum_probs=131.1
Q ss_pred cceeecceeccCCceEEEEEEEcCC-------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.|.+++.||+|+||.||+|.+... ...+|+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 4599999999999999999986542 3469999986532 234556788999999999779999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+..|+||||+.+|+|.+++...+ .++...+..++.|++.||+|||++||+||||||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-- 173 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-- 173 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE--
Confidence 999999999999999999997542 37788899999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccC
Q 040003 265 QQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~ 283 (489)
+.++.+||+|||+++.+.
T Consensus 174 -~~~~~~kL~dfg~a~~~~ 191 (307)
T cd05098 174 -TEDNVMKIADFGLARDIH 191 (307)
T ss_pred -cCCCcEEECCCccccccc
Confidence 667889999999998664
No 173
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.95 E-value=1.2e-26 Score=223.04 Aligned_cols=237 Identities=18% Similarity=0.215 Sum_probs=163.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCc--EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQK--EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
|.+++.||+|+||.||+|.+..++. .+|+|.++... ......+.+.+|+++++.+ +|+||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence 3467889999999999999887765 58999886542 3455677889999999999 899999999977432
Q ss_pred CeEEEEEeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 202 VAVHVVMELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
...++||||+.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 3578999999999998887432 347889999999999999999999999999999999999 6678899999
Q ss_pred eccccccCCCCceee--e--eeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhh
Q 040003 276 FGLSMFFRPGLTFRV--W--LRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVI 336 (489)
Q Consensus 276 FGla~~~~~~~~~~~--~--~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 336 (489)
||+++.+..+..... . ....| ..+-++.+.++.+++. |..+|+...-.... .+..-.....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ 235 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 999988754332111 0 00011 1112344777777776 66666532110000 0000000000
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
...+...-.+.+ -+++..|++.|++++|+...|..
T Consensus 236 ~~~~~~~~~~li---~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 236 PPDCLDGLYSLM---SSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCCCHHHHHHH---HHHcCCCcccCcCHHHHHHHHHh
Confidence 111222222222 25677888889999998877755
No 174
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95 E-value=1.1e-26 Score=221.91 Aligned_cols=235 Identities=20% Similarity=0.215 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.+ +|+||+++++++.+....|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEE
Confidence 45999999999999999999865 55679999876432 2356788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++... ..++......++.+++.||.|||+++++||||||+||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCCC
Confidence 9999999999988653 457888889999999999999999999999999999999 66788999999999876543
Q ss_pred Cceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... .....| .-+-.+.+.++.+++. |..+|+...-.... .+...........++.+-.+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDI 236 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 22110 000111 0122344777888886 77766542110000 000000000001122222222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+-+++..+++.|.+++++..+|..
T Consensus 237 ---i~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 237 ---MKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---HHHHccCCcccCcCHHHHHHHHhc
Confidence 235677788888888888887754
No 175
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95 E-value=1.7e-26 Score=231.14 Aligned_cols=188 Identities=20% Similarity=0.320 Sum_probs=148.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.+ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence 4467999999999999999999999999999999986532 2344556788999999999 899999999988643
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|+|||||.+ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~~ 166 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 166 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCccc
Confidence 357999999965 67666643 58888999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceee-eeeccC---------C----CCcchhHHHHHHHhcccccCCCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+.......... +.+..| . -+-++.+.++.+++.|...|....
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 222 (355)
T cd07874 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222 (355)
T ss_pred ccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 87644322111 122222 1 122345788888888888876543
No 176
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95 E-value=9.5e-27 Score=235.32 Aligned_cols=151 Identities=25% Similarity=0.408 Sum_probs=128.2
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.++++||+|+||.||+|++. .+++.||+|++.... .....+.+.+|+.+|.++..|||||++++++....
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 35888999999999999999864 345689999996532 23344678899999999944999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------------------------------------------------
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---------------------------------------------------------- 224 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 224 (489)
..|+|||||.+|+|.+++...+
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 9999999999999999986432
Q ss_pred ----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 225 ----------------------------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 225 ----------------------------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.++...+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl-- 272 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI-- 272 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE--
Confidence 24556677889999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccC
Q 040003 265 QQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~ 283 (489)
+..+.+||+|||+++.+.
T Consensus 273 -~~~~~~kL~DfGla~~~~ 290 (401)
T cd05107 273 -CEGKLVKICDFGLARDIM 290 (401)
T ss_pred -eCCCEEEEEecCcceecc
Confidence 557789999999998654
No 177
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.95 E-value=2e-26 Score=221.07 Aligned_cols=151 Identities=27% Similarity=0.394 Sum_probs=132.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++++ +||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence 358999999999999999998865543 69999886432 344567889999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+++++|.+++... +.++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence 9999999999999998764 468999999999999999999999999999999999999 667889999999998765
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 158 ~ 158 (267)
T cd05066 158 D 158 (267)
T ss_pred c
Confidence 4
No 178
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.95 E-value=1.2e-26 Score=221.16 Aligned_cols=233 Identities=23% Similarity=0.262 Sum_probs=167.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|... ++.||+|.+.... ...+++.+|+.+++.+ +|+||+++++++.+....|+|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDS----TAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccch----hHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEE
Confidence 35889999999999999999864 7899999986432 1457889999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccccc
Confidence 99999999999987665 68999999999999999999999999999999999999 66788999999999876433
Q ss_pred CceeeeeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHH
Q 040003 286 LTFRVWLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 286 ~~~~~~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
.... .....| .+ +-++.+.++.+++. |..+|....+.... .+.+..........+.+-.+.+.
T Consensus 156 ~~~~-~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~- 233 (256)
T cd05039 156 QDSG-KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMK- 233 (256)
T ss_pred cccC-CCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHH-
Confidence 2211 001111 11 11233556666664 66665443221100 00000000011122222222222
Q ss_pred HHhhhcCCCCCCccHHHHHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+++..+++.|++.+|+...|+.
T Consensus 234 --~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 234 --DCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --HHhccChhhCcCHHHHHHHHhc
Confidence 4677788888888888877754
No 179
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=1.8e-26 Score=223.43 Aligned_cols=184 Identities=22% Similarity=0.278 Sum_probs=146.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|++..++..||+|.+..... .......+.+|+.+++.+ +||||+++++++.+...+|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEe
Confidence 8889999999999999999999999999999865322 222345678899999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+. ++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCCc
Confidence 997 5888877542 468999999999999999999999999999999999999 677889999999997654321
Q ss_pred ceee------------eeeccCCC----CcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV------------WLRLHFLF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~------------~~~~~ypf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ++.+.-++ +-++.+.++.+++.|...|..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1100 11111011 123447788888888777653
No 180
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=1.5e-26 Score=224.70 Aligned_cols=237 Identities=19% Similarity=0.234 Sum_probs=166.9
Q ss_pred eeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
|++.+.||+|+||.||+|+... ....+|+|.+... ........+.+|+.+++.+ +||||+++++.+...+..
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN--ASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGPL 78 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC--CCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCCc
Confidence 7788999999999999998753 2356888887643 2344567889999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 205 HVVMELCAGGELFDRIIQR------------------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
|+||||+.+++|.+++... ..++...+..++.|++.||+|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999988642 2367788899999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLW 322 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~ 322 (489)
|+ +.++.+||+|||+++.+........ .....| . -+-++.+.++.+++. |..+|+....
T Consensus 159 ll---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 159 LV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred EE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99 5677899999999986543322110 000111 0 011234667777776 7766653221
Q ss_pred CCCC-CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 323 PDKV-AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 323 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.... .+.+..........+.+-.. -+..++..+++.|++..|+...|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 236 ERLFNLLKTGYRMERPENCSEEMYN---LMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHH---HHHHHccCCcccCCCHHHHHHHHHHH
Confidence 1000 00000000111122222222 23467788888999999998888765
No 181
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=2e-26 Score=226.64 Aligned_cols=240 Identities=20% Similarity=0.242 Sum_probs=166.5
Q ss_pred cceeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
++|.++++||+|+||.||+|.+.. ....+|+|.+... ........+.+|+++++.+.+||||+++++++.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN--ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC--CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 569999999999999999998642 3457999988643 2344567788999999999669999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+.+|+||||+.+|+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-- 167 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV-- 167 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE--
Confidence 99999999999999999998653 247788889999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee--eeec--cC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV--WLRL--HF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~--~~~~--~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.......... .... .| ++ +-++.+.++.+++. |..+|.........
T Consensus 168 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 168 -TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred -cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 6677899999999986643221111 0000 11 01 11233666667665 55544332110000
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.+ -+.+++..|++.|++..|+...|.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~---li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 247 KLLREGHRMDKPSNCTHELYM---LMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHHHcCCCCCCCCCCCHHHHH---HHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 00000000001112222222 23367788888899998888877654
No 182
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=2.2e-26 Score=226.46 Aligned_cols=151 Identities=31% Similarity=0.477 Sum_probs=137.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+++++.+ +||||+++++.+.+....|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEEE
Confidence 589999999999999999999999999999999876554445667889999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||+.+++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhccc
Confidence 999999999988654 468999999999999999999999999999999999999 667889999999987654
No 183
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.95 E-value=2e-26 Score=222.59 Aligned_cols=182 Identities=21% Similarity=0.276 Sum_probs=141.7
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH---HHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR---IMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~---~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
.||+|+||.||+|.+..+++.||+|.+.+..............|.. +++.. +||||+.+++++.+....|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEEEEecC
Confidence 4899999999999999999999999997654432222223334443 34444 7999999999999999999999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeee
Q 040003 212 AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291 (489)
Q Consensus 212 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~ 291 (489)
.|++|.+++...+.+++..+..++.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||++..+.........
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV 156 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccCCcCcC
Confidence 999999999887889999999999999999999999999999999999999 66788999999999765432221111
Q ss_pred eeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 292 LRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 292 ~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+..| .+ +-++.+.++.+++.|..+|...
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 11111 11 2234477888899888877643
No 184
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95 E-value=2.3e-26 Score=224.81 Aligned_cols=239 Identities=21% Similarity=0.259 Sum_probs=169.0
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.+.||+|+||.||+|.+. .++..||+|.++... .....+.+.+|+.+++++.+||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 45999999999999999999752 345689999886432 23455778999999999967999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..|+||||+.+|+|.+++.... .+++..+..++.+++.||.|||+++|+||||||+|||+ +.++.+||+|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCcccc
Confidence 9999999999999999986543 38999999999999999999999999999999999999 567789999999998
Q ss_pred ccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhc
Q 040003 281 FFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESL 340 (489)
Q Consensus 281 ~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 340 (489)
.+........ .....| .+ +-++.+.++.+++. |..+|....-.... .+............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHA 269 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCC
Confidence 7654332111 000111 01 12344677778775 77666432110000 00000000001112
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+.+-.+. +-++++.+++.|+++.|+...|.+
T Consensus 270 ~~~~~~l---i~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 270 PAEIYDI---MKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CHHHHHH---HHHHcCCCchhCcCHHHHHHHHHh
Confidence 2221121 225677888889999998877765
No 185
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=3.1e-26 Score=217.95 Aligned_cols=186 Identities=21% Similarity=0.288 Sum_probs=152.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.|++|.+..... .......+.+|+++++.+ +||||+++++++.+....|+|||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEEE
Confidence 7888999999999999999999999999999875443 345567889999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+++++|.+++... ..+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCccc
Confidence 99999999998764 568899999999999999999999999999999999999 6678899999999987755433
Q ss_pred eeeeeecc--C---------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 288 FRVWLRLH--F---------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~~~~~~--y---------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
......+. | + -+-.+.+.++.+++.|..+|...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 204 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN 204 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 22111111 1 1 11123467778888887776543
No 186
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=1.7e-26 Score=220.56 Aligned_cols=183 Identities=26% Similarity=0.298 Sum_probs=142.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|.+..+++.||+|.+.+...........+..|..++....+|+||+++++++...+..|+||||+.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999999999999999987544333333445566666665554899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--- 290 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--- 290 (489)
++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++...........
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccccccCCCCcC
Confidence 9999999887889999999999999999999999999999999999999 6678899999999876532211100
Q ss_pred -----eeecc-C--CCCcchhHHHHHHHhcccccCCC
Q 040003 291 -----WLRLH-F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 -----~~~~~-y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
++.+. | .-+-.+.+.++.+++.|..+|..
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 11111 1 11112346777788888777753
No 187
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.95 E-value=1.7e-26 Score=222.66 Aligned_cols=151 Identities=25% Similarity=0.347 Sum_probs=130.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+|+.+ +||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCC
Confidence 46999999999999999999886543 789999985432 334456788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
..|+||||+.+|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCEE
Confidence 9999999999999999986532 35677889999999999999999999999999999999 6778899
Q ss_pred EEeeccccccCC
Q 040003 273 TIDFGLSMFFRP 284 (489)
Q Consensus 273 l~DFGla~~~~~ 284 (489)
|+|||+++.+..
T Consensus 160 l~dfg~~~~~~~ 171 (277)
T cd05032 160 IGDFGMTRDIYE 171 (277)
T ss_pred ECCcccchhhcc
Confidence 999999986543
No 188
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=3e-26 Score=219.68 Aligned_cols=149 Identities=30% Similarity=0.458 Sum_probs=136.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999986532 33445678999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQIT 157 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEcc
Confidence 9999999999999888899999999999999999999999999999999999999 667889999999987654
No 189
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.95 E-value=1.8e-26 Score=221.19 Aligned_cols=235 Identities=24% Similarity=0.283 Sum_probs=167.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 204 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+.+|+.+++.+ +||||+++++++.+ ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence 388899999999999999999999999999998654322 234456788999999999 79999999999875 3678
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+++|||+.+++|.+++...+.+++.....++.|++.||.|||+++|+||||||+||++ +.++.+||+|||+++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence 9999999999999999887789999999999999999999999999999999999999 6677899999999986542
Q ss_pred CCce----e-eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHH
Q 040003 285 GLTF----R-VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~----~-~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (489)
.... . ...+..| .+ +-++.+.++.+++.|..+|....... .+...........+......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AIFKIATQPTNPQLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH--HHHHHhcCCCCCCCchhcCH
Confidence 1110 0 0001111 01 11234778888888887765321100 00000000000111111122
Q ss_pred HHHHHHhhhcCCCCCCccHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.++.+..++..++++|++.+|+.
T Consensus 237 ~~~~li~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 237 HARDFLGCIFVEARHRPSAEELL 259 (266)
T ss_pred HHHHHHHHhcCChhhCcCHHHHh
Confidence 34444566677888888877764
No 190
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=4.8e-26 Score=221.97 Aligned_cols=236 Identities=24% Similarity=0.259 Sum_probs=170.7
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
++....|++.+.||+|+||.||+|++..+++.||+|.+..... ...+.+.+|+.+++.+ +|+||+++++++.....
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~ 91 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDE 91 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCE
Confidence 3445679999999999999999999999999999999875432 2346788999999998 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+.+++|.+++.. +.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred EEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcc
Confidence 9999999999999998754 468899999999999999999999999999999999999 667889999999988654
Q ss_pred CCCceee--eeeccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchh--hhhhccHHHH
Q 040003 284 PGLTFRV--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRV--IAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 345 (489)
....... ..+..| . -+-++.+.++.+++.|..+|......... ......... ....+...-.
T Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (296)
T cd06654 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247 (296)
T ss_pred ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHH
Confidence 3321111 011111 1 11234477888899998887543211100 000000000 0111222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+. ++++.++..|.+..|+..
T Consensus 248 ~li~---~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 248 DFLN---RCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHH---HHCcCCcccCcCHHHHhh
Confidence 2222 467778888888888754
No 191
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1e-25 Score=228.32 Aligned_cols=182 Identities=23% Similarity=0.316 Sum_probs=147.2
Q ss_pred ccceeecceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...|++++.||+|+||.||+|... .+++.||+|.+... ....+|+++|+.| +|||||+++++|......
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTI-SHRAIINLIHAYRWKSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhc-CCCCccceeeeEeeCCEE
Confidence 346999999999999999999764 35678999987542 2345799999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||++. ++|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.+..
T Consensus 162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLDA 237 (392)
T ss_pred EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccCc
Confidence 99999995 6898988777789999999999999999999999999999999999999 6778899999999987654
Q ss_pred CCce----eeeeeccC---------CC----CcchhHHHHHHHhcccccCCCCC
Q 040003 285 GLTF----RVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 285 ~~~~----~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
.... ..+.+..| +| +.++.++++.+++.|..+|....
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 3221 11122222 11 22345788889998888876543
No 192
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.95 E-value=1.7e-26 Score=221.18 Aligned_cols=151 Identities=32% Similarity=0.495 Sum_probs=134.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.|++++.||+|+||.||+|.+..+++.||+|.+..... ......+.+.+|+.+++++ +||||+++++++.+. ..+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCceE
Confidence 48999999999999999999999999999998864321 2234567889999999999 899999999998763 568
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+++++|.+++...+.+++..+..++.|++.+|.|||+.||+|+||||+|||+ +.++.+||+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccccc
Confidence 8999999999999999887788999999999999999999999999999999999999 667889999999998654
No 193
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95 E-value=6.6e-26 Score=219.49 Aligned_cols=187 Identities=24% Similarity=0.355 Sum_probs=150.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.+ +||||+++++++......++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEEE
Confidence 58999999999999999999999999999999865432 222335678999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||++++.|..++.....+++..+..++.|++.+|.|||++||+||||||+||++ +.++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCccc
Confidence 999998887776666679999999999999999999999999999999999999 66788999999999877544311
Q ss_pred ee------------eee--ccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 289 RV------------WLR--LHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 289 ~~------------~~~--~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. .+. ..| .-+.++.+.++.+++.|..+|+..
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~ 204 (286)
T cd07847 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK 204 (286)
T ss_pred ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 10 010 111 112234477788888888777643
No 194
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.95 E-value=2.4e-26 Score=221.94 Aligned_cols=239 Identities=18% Similarity=0.173 Sum_probs=167.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.++||+|+||+||+|.+..+++ .||+|++... ........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGV-GSPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC--CCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcC-CC
Confidence 458999999999999999999877776 4799988643 2344556788999999999 79999999999875 45
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+++|||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCceeec
Confidence 78999999999999998764 568999999999999999999999999999999999999 55677999999999876
Q ss_pred CCCCceeee----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRVW----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~~----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
......... ....| .+ +-++.++++.+++. |..++....-.... .+............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTI- 238 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCH-
Confidence 533221110 00111 11 12344677777665 66655432100000 0000000000111222
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
++.. -+.+++..|++.|.+..|+...|..+.
T Consensus 239 ~~~~--li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 239 DVYM--IMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred HHHH--HHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 2222 234678888899999999887776653
No 195
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=2e-26 Score=225.46 Aligned_cols=152 Identities=27% Similarity=0.416 Sum_probs=130.5
Q ss_pred cceeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.|.+.+.||+|+||.||+|++.. .+..||+|.+... ........+.+|+.+++.+.+||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc--cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 569999999999999999997532 3457999988643 2344567889999999999779999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
....|+||||+.+|+|.+++.... .++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili-- 170 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV-- 170 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE--
Confidence 999999999999999999987642 35677888999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~ 284 (489)
+.++.+||+|||+++.+..
T Consensus 171 -~~~~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 171 -TENNVMKIADFGLARDVNN 189 (304)
T ss_pred -cCCCcEEECCCccceeccc
Confidence 6678899999999987643
No 196
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=2.1e-26 Score=222.51 Aligned_cols=239 Identities=17% Similarity=0.217 Sum_probs=166.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcE----EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.+.||+|+||+||+|.+..+++. +++|.+... ........+..|+.+++++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-Cc
Confidence 3588999999999999999998877764 666666422 2233456788899999999 89999999998754 56
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+++|||+.+|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 78999999999999999764 568999999999999999999999999999999999999 66788999999999876
Q ss_pred CCCCceee---------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCCCCCCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV---------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKVAVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~---------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (489)
........ ...+.| .-+-++.+.++.+++. |..++.+..+.....+................
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTID 239 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHH
Confidence 43321100 001111 0122344777888876 77666543221100000000000000111111
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. ..-+-.+++.|++.|.+..|+...|..+
T Consensus 240 ~--~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 240 V--YMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred H--HHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1 2223478889999999999998877664
No 197
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=2.6e-26 Score=230.51 Aligned_cols=186 Identities=20% Similarity=0.336 Sum_probs=146.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|++.+.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence 4467999999999999999999999999999999986533 2334456788999999999 899999999987543
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|+||||+.+ +|...+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCc
Confidence 457999999965 67776643 57888999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.......... +.+..| .+ +-++.++++.+++.|...|+.
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 87644322111 122222 11 123457788888888877764
No 198
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=2.2e-26 Score=228.22 Aligned_cols=240 Identities=21% Similarity=0.257 Sum_probs=166.7
Q ss_pred cceeecceeccCCceEEEEEEEcCC-------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
..|++++.||+|+||.||+|++... ...||+|.+... ......+.+.+|+++++++.+||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 3599999999999999999986542 236899987643 2344567889999999999679999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+..|+||||+.+|+|.+++.... .++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill-- 167 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV-- 167 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE--
Confidence 999999999999999999987532 35667788899999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceeee----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRVW----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~~----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.+......... ....| .+ +.++.+.++.+++. |..+|....+....
T Consensus 168 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 168 -TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred -cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 66788999999999866432211110 00011 01 11234667777765 55555433221100
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.. -+.+++..+++.|+++.|+...|..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~---li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 247 KLLKEGHRMDKPANCTHELYM---IMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred HHHHcCCCCCCCCCCCHHHHH---HHHHHcccChhhCcCHHHHHHHHHHH
Confidence 00000000011112222111 23356778888899999888877665
No 199
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.95 E-value=1.5e-26 Score=222.06 Aligned_cols=143 Identities=20% Similarity=0.337 Sum_probs=120.7
Q ss_pred ceeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
+.||+|+||+||+|.... ....+|+|.+... ........+.+|+++++.+ +||||+++++++.+...+|+||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS--ATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc--CChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeC
Confidence 369999999999996533 3456888876532 2344456788999999999 8999999999999999999999999
Q ss_pred CCCchHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 212 AGGELFDRIIQRG-----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 212 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|.+++.... ..++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQ 150 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEecccccccc
Confidence 9999999986642 24567788999999999999999999999999999999 66788999999998754
No 200
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95 E-value=4.1e-26 Score=220.41 Aligned_cols=150 Identities=30% Similarity=0.471 Sum_probs=136.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||.||+|.+..++..+|+|.+... .....+.+.+|+++++++ +||||+++++++......|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Confidence 45699999999999999999999889999999998643 445567888999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||+.+++|.+++... ..+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.+||+|||++....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNK 154 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhc
Confidence 99999999999988764 468999999999999999999999999999999999999 667889999999987654
No 201
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95 E-value=9.1e-26 Score=217.93 Aligned_cols=238 Identities=16% Similarity=0.172 Sum_probs=168.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
..|++.+.||+|+||.||+|.++.+++ .+|+|.+.... .......+.+|+.+++++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-Cc
Confidence 358999999999999999999877665 58999876442 244567788999999999 89999999999887 78
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++||||+.+|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcccccc
Confidence 99999999999999998764 468999999999999999999999999999999999999 66778999999999876
Q ss_pred CCCCceeeeee----ccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRVWLR----LHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~~~~----~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........... ..| ++ +-++.+.++.+++. |..++......+.. .+.+..........+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTID 239 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHH
Confidence 54332111000 011 11 11233667777775 76665432211000 00000000001111111
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. ..-+.+++..|++.+.+..++...|..+
T Consensus 240 -~--~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 240 -V--YMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred -H--HHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1 1223466777888888888888877765
No 202
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.95 E-value=2.2e-26 Score=221.95 Aligned_cols=152 Identities=22% Similarity=0.354 Sum_probs=129.6
Q ss_pred ccceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~--~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 3569999999999999999998653 4567999988543 2233456788999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
...++||||+.+++|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||+ +.++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---cCCCCE
Confidence 99999999999999999986532 24567788899999999999999999999999999999 667889
Q ss_pred EEEeeccccccCC
Q 040003 272 KTIDFGLSMFFRP 284 (489)
Q Consensus 272 kl~DFGla~~~~~ 284 (489)
||+|||+++.+..
T Consensus 159 ~l~dfg~~~~~~~ 171 (277)
T cd05062 159 KIGDFGMTRDIYE 171 (277)
T ss_pred EECCCCCccccCC
Confidence 9999999986543
No 203
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=4.7e-26 Score=222.13 Aligned_cols=236 Identities=24% Similarity=0.259 Sum_probs=171.9
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
++....|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +|+||+++++++.....
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~ 90 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDE 90 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCE
Confidence 4455679999999999999999999999999999999865332 2346688999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+++++|.+++.. ..+++..+..++.|++.+|.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 91 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEcc
Confidence 9999999999999998754 468899999999999999999999999999999999999 677889999999998765
Q ss_pred CCCceee--eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchh--hhhhccHHHH
Q 040003 284 PGLTFRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRV--IAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 345 (489)
....... ..+..| .+ +-++.+.++.+++.|..+|......... ......... ....++....
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFR 246 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHH
Confidence 4332111 011111 11 1123477888899998877543211100 000000000 0112222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+ -+++..|++.|.+..|+..
T Consensus 247 ~li---~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 247 DFL---NRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHH---HHHccCChhhCcCHHHHhc
Confidence 222 2567778888999888764
No 204
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.95 E-value=2.7e-26 Score=221.41 Aligned_cols=153 Identities=23% Similarity=0.355 Sum_probs=132.8
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.+ +|+||+++++++.+..
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence 458999999999999999999987 7788999987543 2334446788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 AVHVVMELCAGGELFDRIIQRG-------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..|+||||+.|++|.+++...+ .+++..+..++.||+.||+|||+++|+||||||+|||+...+....+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999987643 478889999999999999999999999999999999996544445799999
Q ss_pred eccccccC
Q 040003 276 FGLSMFFR 283 (489)
Q Consensus 276 FGla~~~~ 283 (489)
||+++.+.
T Consensus 163 fg~~~~~~ 170 (277)
T cd05036 163 FGMARDIY 170 (277)
T ss_pred CccccccC
Confidence 99998763
No 205
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95 E-value=7.3e-26 Score=219.73 Aligned_cols=150 Identities=23% Similarity=0.319 Sum_probs=127.8
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
++|++.++||+|+||.||+|..+. .+..||+|.+.... .......+.+|+.+++.+ +||||+++++++.+..
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQ 82 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCC
Confidence 569999999999999999997652 35579999876432 233445678999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
..|+||||+.+|+|.+++...+ ......+..++.|++.||.|||++||+||||||+|||+ +.++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---cCCCcEE
Confidence 9999999999999999996532 23556788899999999999999999999999999999 6678899
Q ss_pred EEeeccccccC
Q 040003 273 TIDFGLSMFFR 283 (489)
Q Consensus 273 l~DFGla~~~~ 283 (489)
|+|||+++.+.
T Consensus 160 L~Dfg~~~~~~ 170 (288)
T cd05061 160 IGDFGMTRDIY 170 (288)
T ss_pred ECcCCcccccc
Confidence 99999998654
No 206
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95 E-value=2.3e-26 Score=221.04 Aligned_cols=233 Identities=18% Similarity=0.179 Sum_probs=161.6
Q ss_pred eeccCCceEEEEEEEcCCCcE--EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEKATQKE--FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||+|.+..++.. +|+|.+... ......+.+.+|++++.++.+||||+++++++...+..|+||||+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 589999999999999887764 577777532 2344557888999999999779999999999999999999999999
Q ss_pred CCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 213 GGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 213 ~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
+|+|.+++.... .++...+..++.|++.||+|||++||+||||||+|||+ +.++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECCC
Confidence 999999987542 36788899999999999999999999999999999999 67788999999
Q ss_pred ccccccCCCCcee-------e-----eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhc
Q 040003 277 GLSMFFRPGLTFR-------V-----WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~~~~~~~-------~-----~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (489)
|++.......... . +....|. -+-++.+.++.+++. |..+|....+.... .+............
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 236 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcC
Confidence 9986322110000 0 0011110 112344777778875 77666443221100 00000000001112
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+.+-. .-+.+++..|+..|++..|+...|..+
T Consensus 237 ~~~~~---~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 237 DDEVY---DLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CHHHH---HHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 22211 223466778888889888887777553
No 207
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.95 E-value=4.1e-26 Score=220.15 Aligned_cols=181 Identities=25% Similarity=0.362 Sum_probs=147.1
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||+||+|.+..+++.||+|.+.+...........+.+|+++|+.+ +||||+++++++...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 69999999999999999999999999765444444456677899999999 79999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---
Q 040003 216 LFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--- 290 (489)
Q Consensus 216 L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--- 290 (489)
|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...........
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence 999987765 68999999999999999999999999999999999999 6678899999999987643221111
Q ss_pred ---------eeeccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 291 ---------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 291 ---------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+....+ .-+-++.+.++.+++.|..+|...
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 111111 112234477888888888877543
No 208
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95 E-value=2.9e-26 Score=219.13 Aligned_cols=235 Identities=21% Similarity=0.233 Sum_probs=167.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.+++++ +||||+++++++......|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeee
Confidence 45999999999999999999875 457899999865432 245688999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++.... .++...+..++.+++.||.+||++||+||||||+||++ +.++.+||+|||+++.+...
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEccCC
Confidence 99999999999987653 68999999999999999999999999999999999999 66788999999999876532
Q ss_pred Cceeee---eeccC--C-----------CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRVW---LRLHF--L-----------FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~~---~~~~y--p-----------f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
...... ....| | -+-.+.+.++.+++. |..+|......... .+............+..-.+
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 235 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYD- 235 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH-
Confidence 211100 00111 1 111234667777776 77766543211000 00000000001112222111
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+-+++..+++.|.+++++...|..
T Consensus 236 --li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 236 --IMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --HHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1235677788888988888877653
No 209
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=3.5e-26 Score=219.23 Aligned_cols=150 Identities=25% Similarity=0.488 Sum_probs=135.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH------HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE------EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~------~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
|.++..||+|+||.||+|.+..+++.||+|.+........ ...+.+.+|+.+++++ +||||+++++++.+...
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCc
Confidence 7788899999999999999998999999998865433221 2345788999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++.+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCcccc
Confidence 99999999999999999888889999999999999999999999999999999999999 677889999999998775
No 210
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.95 E-value=1.7e-26 Score=229.90 Aligned_cols=188 Identities=23% Similarity=0.356 Sum_probs=148.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.+.|++++.||+|+||+||+|.+..+++.||+|++.+.. ........+.+|+.+|+++ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccccc
Confidence 3467999999999999999999999999999999986532 2223445677999999999 799999999987543
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|++||++ +++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCccc
Confidence 4579999998 778877664 4579999999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCceee---------eeec--cC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFRV---------WLRL--HF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~~---------~~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.......... ++.+ .| .-+-++.+.++.+++.|...|+..
T Consensus 166 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 166 RQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred eecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 87654321110 1111 11 122345588888999988877654
No 211
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=4.1e-26 Score=222.19 Aligned_cols=152 Identities=25% Similarity=0.397 Sum_probs=133.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCC----------------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----------------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~----------------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 191 (489)
+.|++++.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+++++.+ +||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRL-SDPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhc-CCCCE
Confidence 45999999999999999999876544 568999886542 235567889999999999 79999
Q ss_pred eEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 192 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
+++++++......++||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999987655 688999999999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccCCC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
++ +.++.+||+|||+++.....
T Consensus 162 li---~~~~~~~l~dfg~~~~~~~~ 183 (296)
T cd05051 162 LV---GKNYTIKIADFGMSRNLYSS 183 (296)
T ss_pred ee---cCCCceEEccccceeecccC
Confidence 99 66688999999999876443
No 212
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=2.2e-26 Score=219.31 Aligned_cols=147 Identities=29% Similarity=0.455 Sum_probs=129.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+. ++..+|+|.+.+... ....+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEE
Confidence 3888999999999999999876 466899999864332 124577899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~ 152 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLD 152 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceeccc
Confidence 999999999998754 468899999999999999999999999999999999999 6678899999999986643
No 213
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.94 E-value=8e-26 Score=219.86 Aligned_cols=151 Identities=28% Similarity=0.489 Sum_probs=135.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|+++++||+|+||.||+|.+..+++.||+|.+... .....+.+.+|+.+++.+ +||||+++++++.....+|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEE
Confidence 346699999999999999999999999999999998643 455677889999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+||||+.+++|..++.. ...+++..+..++.|++.+|.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceecc
Confidence 99999999999887754 4568999999999999999999999999999999999999 667889999999987643
No 214
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.94 E-value=3.1e-26 Score=223.16 Aligned_cols=152 Identities=28% Similarity=0.423 Sum_probs=130.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCC--------------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ--------------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~--------------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 193 (489)
.+|++.++||+|+||.||+|++..++ ..||+|.+... ......+.+.+|+++|+++ +|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~ei~~l~~l-~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD--VTKTARNDFLKEIKIMSRL-KNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC--CCHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence 46999999999999999999875432 35899998653 2344566789999999999 8999999
Q ss_pred EEEEEEeCCeEEEEEeecCCCchHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEe
Q 040003 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRG------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFL 261 (489)
Q Consensus 194 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nil 261 (489)
+++++......|+|||||.+++|.+++.... .++...+..++.+++.||.|||++||+||||||+|||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999886532 3577788899999999999999999999999999999
Q ss_pred eeeCCCCCCeEEEeeccccccCCC
Q 040003 262 FINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 262 l~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+ +.++.+||+|||++..+...
T Consensus 162 l---~~~~~~kl~dfg~~~~~~~~ 182 (295)
T cd05097 162 V---GNHYTIKIADFGMSRNLYSG 182 (295)
T ss_pred E---cCCCcEEecccccccccccC
Confidence 9 56778999999999876443
No 215
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.5e-28 Score=218.37 Aligned_cols=184 Identities=23% Similarity=0.322 Sum_probs=144.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE--------e
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE--------D 200 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--------~ 200 (489)
.|+-..+||+|.||.||+|+.+.+|+.||+|++--... ....-....+|+.+|..| .|+|++.+++.|. +
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcccc
Confidence 37778899999999999999999999999987643111 111224567899999999 7999999988763 3
Q ss_pred CCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...+|+||.+|+. +|.-+|... .+++..++..++++++.||.|+|...|+|||+|++|+|| +.++.+||+|||+|
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccccc
Confidence 4569999999976 888888765 579999999999999999999999999999999999999 78899999999999
Q ss_pred cccCCCC------ceeeeeeccC--------------CCCcchhHHHHHHHhcccccCC
Q 040003 280 MFFRPGL------TFRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 280 ~~~~~~~------~~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
+.+.... ....+.+..| |.+.+..+|++.++..+..-+.
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 8775322 1222444444 4444555788887776654443
No 216
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94 E-value=1.2e-26 Score=221.59 Aligned_cols=236 Identities=18% Similarity=0.215 Sum_probs=169.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|+++++||.|+||.||+|.+.. ++.+|+|++.... ......+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEE
Confidence 459999999999999999999987 8899999986532 23456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+++++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhcCCc
Confidence 9999999999998753 458889999999999999999999999999999999999 66788999999999876432
Q ss_pred Cceee------------e-eeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 286 LTFRV------------W-LRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 286 ~~~~~------------~-~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
..... . ....+ .-+-++.+.++.+++. |..+|....-.... .+............+.+..+
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYK-- 235 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHH--
Confidence 21111 0 00111 0111234667777776 66666533210000 00000000011112222221
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+.+++..|++.|++..++.+.|..
T Consensus 236 -~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 236 -IMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred -HHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2236677888889999998887754
No 217
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94 E-value=4.6e-26 Score=220.36 Aligned_cols=149 Identities=29% Similarity=0.491 Sum_probs=134.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..++..+|+|.+... .....+.+.+|+++++.+ +||||+++++++......|+|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEE
Confidence 4588999999999999999999999999999998543 345567888999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.+++|..++.. .+.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNT 154 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEcccccccccc
Confidence 999999999887754 4568999999999999999999999999999999999999 667889999999997653
No 218
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=5.6e-26 Score=236.66 Aligned_cols=187 Identities=19% Similarity=0.247 Sum_probs=136.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCC-cEEEEE--------------EeecccCCCHHHHHHHHHHHHHHHHhcCCC
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQ-KEFACK--------------SIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK--------------~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp 189 (489)
.+.+.|+++++||+|+||+||+|..+... ..+++| .+.+...........+.+|+.+|+++ +||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCC
Confidence 34567999999999999999998765432 222222 11111112233456788999999999 899
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
|||++++++.+.+..|+|||++. ++|..++... .......++.++.||+.||.|||++|||||||||+|||+
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl-- 300 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL-- 300 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE--
Confidence 99999999999999999999985 5777776532 223456778899999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCcee---eeeeccC---------CC----CcchhHHHHHHHhccccc
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFR---VWLRLHF---------LF----FQKQRQSVLQTRLVRNLN 316 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~---~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~ 316 (489)
+.++.+||+|||+++.+....... .+.+..| .| +-++.++++.+++.+.+.
T Consensus 301 -~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 301 -NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred -CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 667889999999998775432211 1122222 11 223457788888877653
No 219
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94 E-value=7.9e-26 Score=215.36 Aligned_cols=186 Identities=25% Similarity=0.335 Sum_probs=150.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||.+++..+++.+++|.+...... ......+.+|+++++++ +|+||+++++++.+...+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence 388999999999999999999999999999998755433 34556788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||.+++|.+++... ..+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEccccc
Confidence 999999999998764 468999999999999999999999999999999999999 667789999999998764433
Q ss_pred ceee--eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV--WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~--~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... +.+..| .-+-++.+.++.+++.|...|..
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA 203 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC
Confidence 1100 111111 11123447777788877666543
No 220
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=3.9e-26 Score=217.63 Aligned_cols=230 Identities=25% Similarity=0.302 Sum_probs=166.7
Q ss_pred ceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
+.||+|+||.||+|.+... +..||+|.+..... ......+.+|+++++.+ +|+||+++++++.+....++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEe
Confidence 3699999999999999866 88999999875432 22467889999999999 699999999999999999999999
Q ss_pred cCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 211 CAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 211 ~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEcccccccc
Confidence 9999999999875 678999999999999999999999999999999999999 6678899999999988
Q ss_pred cCCCCceee----eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccH
Q 040003 282 FRPGLTFRV----WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSE 342 (489)
Q Consensus 282 ~~~~~~~~~----~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 342 (489)
......... ..+..| .-+-++.+.++.+++. |..+|....+.... .+............+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD 234 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCCh
Confidence 765431111 111111 1112344677777776 46666543221100 0000000011112222
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+-... +.+++..|++.|++..|+...|
T Consensus 235 ~~~~l---i~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 235 ELYEL---MLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHHH---HHHHccCCcccCcCHHHHHHhh
Confidence 22222 3356778888889888887665
No 221
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.94 E-value=1.2e-25 Score=215.64 Aligned_cols=238 Identities=18% Similarity=0.184 Sum_probs=167.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+++++.+ +||||+++++++.+.+..|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcE
Confidence 48888999999999999999876654 69999886432 344567789999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+++|.+++... +.+++..+..++.+++.|+.|||+.||+||||||+||++ +.++.+||+|||++.....
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceeccc
Confidence 999999999999988754 578999999999999999999999999999999999999 6678899999999986643
Q ss_pred CCceee----------------eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 285 GLTFRV----------------WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 285 ~~~~~~----------------~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
...... +....|. -+-++.+.++.+++. |..+|......... .+..............+-
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAV 239 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 221111 0001110 011234667777665 66665432110000 000000000000111211
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..-+.+++..+++.|.+..++...|.++
T Consensus 240 ---~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 240 ---YQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1223356677888899999888877653
No 222
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94 E-value=9e-26 Score=218.44 Aligned_cols=149 Identities=25% Similarity=0.374 Sum_probs=127.8
Q ss_pred eeecceeccCCceEEEEEE----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Ce
Q 040003 130 YSLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VA 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~ 203 (489)
|++.+.||+|+||+||++. ...+++.||+|.+.... .......+.+|+++|+++ +||||+++++++... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCce
Confidence 3889999999999998865 33567899999986532 233456788999999999 899999999987653 46
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+||||+.+++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeecccccccC
Confidence 8999999999999998865 469999999999999999999999999999999999999 667889999999998765
Q ss_pred CC
Q 040003 284 PG 285 (489)
Q Consensus 284 ~~ 285 (489)
.+
T Consensus 159 ~~ 160 (283)
T cd05080 159 EG 160 (283)
T ss_pred Cc
Confidence 43
No 223
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=1.6e-25 Score=216.06 Aligned_cols=185 Identities=23% Similarity=0.364 Sum_probs=151.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+..+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++++ +||||+++++++.+....|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEE
Confidence 45888999999999999999999999999999987542 234567889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.|++|.+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||++ +.++.++|+|||++..+.....
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCcc
Confidence 999999999998754 578999999999999999999999999999999999999 6677899999999977654332
Q ss_pred eee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
... ..+..| ++. -.+.+.++.+++.|..++..
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCC
Confidence 111 001111 111 12347788888888877653
No 224
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94 E-value=5.4e-26 Score=218.27 Aligned_cols=150 Identities=27% Similarity=0.392 Sum_probs=133.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.|++.+.||+|+||.||+|.+..+++ .||+|.+... ........+..|+.+++.+ +||||+++++++.+....+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceE
Confidence 48899999999999999999887665 5999998643 2455667899999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+++|.+++... +.++...+..++.|++.||.|||++|++||||||+|||+ +.++.+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCcccccccc
Confidence 999999999999988753 568999999999999999999999999999999999999 6678899999999986643
No 225
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.94 E-value=8.1e-26 Score=215.52 Aligned_cols=149 Identities=22% Similarity=0.373 Sum_probs=130.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|.+.. +..+|+|.+..... ....+.+|+.+++.+ +||||+++++++......|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence 348999999999999999998754 45699998864332 235688999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCC
Confidence 9999999999998764 468999999999999999999999999999999999999 66778999999999866443
No 226
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94 E-value=1.3e-25 Score=217.31 Aligned_cols=152 Identities=29% Similarity=0.397 Sum_probs=131.6
Q ss_pred cceeecceeccCCceEEEEEEE----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 201 (489)
+.|++.+.||+|+||.||+|.. ..+++.||+|.+... .....+.+.+|+++++.+ +||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence 3589999999999999999974 457889999998643 345567889999999999 89999999998643 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..+|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccc
Confidence 5689999999999999998654 468999999999999999999999999999999999999 667889999999999
Q ss_pred ccCCCC
Q 040003 281 FFRPGL 286 (489)
Q Consensus 281 ~~~~~~ 286 (489)
......
T Consensus 157 ~~~~~~ 162 (284)
T cd05081 157 VLPQDK 162 (284)
T ss_pred cccCCC
Confidence 775443
No 227
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.94 E-value=4.8e-26 Score=217.89 Aligned_cols=234 Identities=21% Similarity=0.213 Sum_probs=161.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+..++ .||+|++..... ..+.+.+|+++++.+ +||||+++++++.. ...|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEECC-CCcEEE
Confidence 45999999999999999999887654 699999875332 235688999999999 79999999998754 568999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+|+|.+++... ..+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||+++.+..+
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCceeecccc
Confidence 9999999999998753 357888999999999999999999999999999999999 66788999999999876433
Q ss_pred Cceee--------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV--------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~--------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... +....| .-+-++.+.++.+++. |..+|......... .+............+..-.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 233 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH-- 233 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHH--
Confidence 22110 001111 1111244677778876 66666533210000 0000000000011121111
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.-+-+++..|++.|++..++..+|..
T Consensus 234 -~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 234 -DLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred -HHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11224556677788888887777654
No 228
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=1.5e-27 Score=237.15 Aligned_cols=157 Identities=24% Similarity=0.385 Sum_probs=137.6
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeeccc-CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe--EEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK-LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA--VHVV 207 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~-~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~--~~lv 207 (489)
+...+||+|+|-+||+|.+..+|..||.-.++... ...+..+++|..|+.+|+.| +|||||++|++|.+... +.+|
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCceeeee
Confidence 34568999999999999999999999976554332 34567789999999999999 89999999999987665 7889
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
.|++..|+|..|+++.+++....++.|++||+.||.|||++. |||||||.+||+|+ +..|.|||+|+|||...+..
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhcc
Confidence 999999999999999999999999999999999999999986 99999999999996 45788999999999987655
Q ss_pred Cceee
Q 040003 286 LTFRV 290 (489)
Q Consensus 286 ~~~~~ 290 (489)
.....
T Consensus 200 ~aksv 204 (632)
T KOG0584|consen 200 HAKSV 204 (632)
T ss_pred cccee
Confidence 44443
No 229
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=226.78 Aligned_cols=159 Identities=28% Similarity=0.427 Sum_probs=140.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-e
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-D 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~ 200 (489)
+.++|-++..||+|||+.||+|.+....+.||||+-...+... ....+...+|.+|.+.| +||.||++|+||. +
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLD 539 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeeeec
Confidence 4567999999999999999999999999999999865443322 22345678999999999 8999999999994 6
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.+.+|-|+|||+|.+|.-+|+.+..+++.+++.|+.||+.||.||.+.. |||-||||.||||.+.+..|.+||+||||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 6788999999999999999999999999999999999999999998764 99999999999999988899999999999
Q ss_pred ccccCCC
Q 040003 279 SMFFRPG 285 (489)
Q Consensus 279 a~~~~~~ 285 (489)
++++...
T Consensus 620 SKIMddd 626 (775)
T KOG1151|consen 620 SKIMDDD 626 (775)
T ss_pred hhhccCC
Confidence 9988643
No 230
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94 E-value=7.1e-26 Score=215.94 Aligned_cols=231 Identities=19% Similarity=0.233 Sum_probs=162.4
Q ss_pred ceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
++||+|+||.||+|.+..++ ..+|+|.+...... ...+.+.+|+.+++.+ +|+||+++++++. ....++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876554 78999998755432 3456788999999999 8999999999876 4568999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~ 290 (489)
+.+++|.+++...+.+++..+..++.|++.+|.|||..||+||||||+|||+ +.++.+||+|||+++..........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcccc
Confidence 9999999999887789999999999999999999999999999999999999 6678899999999987754432211
Q ss_pred -eee----ccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHH
Q 040003 291 -WLR----LHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 291 -~~~----~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
... ..| .-+-++.+.++.+++. |..+|....-.... .+............+..-.+.+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~- 232 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIML- 232 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH-
Confidence 000 011 0112244677777775 66666432110000 00000000011112222222222
Q ss_pred HHhhhcCCCCCCccHHHHHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+++..+++.|++..++...|+.
T Consensus 233 --~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 233 --SCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred --HHhcCChhhCcCHHHHHHHHHh
Confidence 4566788888888888887765
No 231
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.94 E-value=7.9e-26 Score=222.58 Aligned_cols=180 Identities=23% Similarity=0.348 Sum_probs=138.2
Q ss_pred cceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEEEEE
Q 040003 133 GRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVHVVM 208 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~lv~ 208 (489)
+++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+++|+++ +||||++++++|.. ...+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999976 4678999999865322 23567899999999 89999999999854 46789999
Q ss_pred eecCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEeecc
Q 040003 209 ELCAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDFGL 278 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DFGl 278 (489)
||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9985 5888776532 248889999999999999999999999999999999999543 3457899999999
Q ss_pred ccccCCCCce-----eeeeecc------------C--CCCcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTF-----RVWLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~-----~~~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|+.+...... ..+.+.. | .-+.++.++++.+++.|...|..
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9876533210 0111111 2 12234558888899988877753
No 232
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.94 E-value=6.8e-26 Score=220.85 Aligned_cols=151 Identities=25% Similarity=0.391 Sum_probs=129.9
Q ss_pred cceeecceeccCCceEEEEEEEcC----------------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----------------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 191 (489)
++|++.++||+|+||.||+|.+.. ++..+|+|++... ........+.+|+.+|+.+ +|+||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~E~~~l~~l-~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED--ANKNARNDFLKEIKIMSRL-KDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCCc
Confidence 459999999999999999986432 3457899988643 2344567889999999999 89999
Q ss_pred eEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 192 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999987542 356678999999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccCC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+ +.++.+||+|||+++.+..
T Consensus 162 li---~~~~~~~l~dfg~~~~~~~ 182 (296)
T cd05095 162 LV---GKNYTIKIADFGMSRNLYS 182 (296)
T ss_pred EE---cCCCCEEeccCcccccccC
Confidence 99 5678899999999987644
No 233
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=1.4e-25 Score=214.03 Aligned_cols=231 Identities=19% Similarity=0.197 Sum_probs=163.5
Q ss_pred eeccCCceEEEEEEE--cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVE--KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+||+|+||.||+|.+ ..++..+|+|++.... ......+.+.+|+.+++.+ +||||+++++++.. ...++||||+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecCC
Confidence 589999999999965 4567899999986432 3344567889999999999 89999999998754 56799999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
+|+|.+++...+.+++..+..++.|++.||+|||++||+||||||.|||+ +.++.+||+|||+++.+........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeeec
Confidence 99999999887889999999999999999999999999999999999999 6678899999999987654432211
Q ss_pred -e--eeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 291 -W--LRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 291 -~--~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
. ....| + -+-++.+.++.+++. |..+|....-.... .+.+..........+.+-.+.+.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~--- 232 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMK--- 232 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH---
Confidence 0 00111 0 111244677888875 76666432100000 00000000111223333222222
Q ss_pred hhhcCCCCCCccHHHHHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.++..|++.|++.+++...|..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 5567788888999888877765
No 234
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=6.6e-26 Score=221.04 Aligned_cols=150 Identities=28% Similarity=0.450 Sum_probs=133.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+..|+++++.+ +|+||+++++++.+....|+|
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEEE
Confidence 88889999999999999999999999999999765432 122335677899999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccC
Confidence 9999 889999987665 79999999999999999999999999999999999999 6678899999999987654
No 235
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.94 E-value=6.1e-28 Score=216.11 Aligned_cols=146 Identities=25% Similarity=0.352 Sum_probs=125.0
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
+-+..||.|+||+|++..++.+|+..|||.|+... .+.+.++++.|.+...+-.+.||||++||..-.++..||+||+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34567999999999999999999999999997653 3667789999999888877899999999999999999999999
Q ss_pred cCCCchHHHH-----HHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 211 CAGGELFDRI-----IQRGHYTERKAADLTRIIVGVVEACH-SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 211 ~~~g~L~~~l-----~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|. .+|..+. .+...++|..+..+..-.+.||.||- .+.||||||||+|||| +..|.+||||||++..+
T Consensus 145 Md-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 145 MD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQL 218 (361)
T ss_pred Hh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhH
Confidence 95 3553332 23457899988888888999999996 5689999999999999 88899999999998654
No 236
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=6.1e-26 Score=219.77 Aligned_cols=186 Identities=19% Similarity=0.174 Sum_probs=152.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||++.+..+++.||+|++.... .......+.+|+++++.+ +||||+++++++.....+|+|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence 45899999999999999999999999999999886432 234457889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+++++|.+++...+.++...+..++.+++.+|.|||+ .+|+||||||+||++ +.++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhhc
Confidence 9999999999988887889999999999999999999997 699999999999999 667889999999987653222
Q ss_pred ceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+..| .-+-++.+.++.+++.|..+|..
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~ 204 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAF 204 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 1111111111 12223457788888888877764
No 237
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.94 E-value=5e-26 Score=218.76 Aligned_cols=186 Identities=22% Similarity=0.293 Sum_probs=148.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
.+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.+|+||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 356899999999999999999999999999999986432 22356788999999986799999999998753
Q ss_pred -CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
..+|+||||+.+++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCC
Confidence 4689999999999999988763 358899999999999999999999999999999999999 6678899999999
Q ss_pred ccccCCCCceee------------eee------ccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTFRV------------WLR------LHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~~~------------~~~------~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+........... ++. ..| .-+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~ 218 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 218 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 986543221110 110 011 12223457788888888877643
No 238
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=3.6e-26 Score=221.16 Aligned_cols=237 Identities=16% Similarity=0.185 Sum_probs=164.8
Q ss_pred ceeecceeccCCceEEEEEEEcCC-----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKAT-----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|++.++||+|+||.||+|.+..+ ++.||+|++.... .....+.+.+|+.++..+ +||||+++++++.+...
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCc
Confidence 488899999999999999987543 5789999986432 234456788999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 204 VHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
.++++||+.+++|.+++..+ ..++...+..++.|++.||.|||++||+||||||+|||+ +.
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---FD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---cC
Confidence 99999999999999988532 247788889999999999999999999999999999999 56
Q ss_pred CCCeEEEeeccccccCCCCceee----eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV----WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~----~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||+++.......... ..+..| . -+-++.+.++.+++. |...+....-.+.. .+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 67899999999887644332211 001111 1 111344667777775 55444321100000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
............+..-...+ -++++.+++.|.+..|+...|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li---~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQVLPCPDDCPAWVYTLM---LECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCcCCCCCCCCHHHHHHH---HHHhCCCcccCCCHHHHHHHhhC
Confidence 00000011112222222222 25778888889998888877653
No 239
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94 E-value=9.3e-26 Score=215.56 Aligned_cols=235 Identities=20% Similarity=0.240 Sum_probs=167.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||.||+|.+. .+..+|+|.+... ......+.+|+++++.+ +|+||+++++++.+ ...|+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEE
Confidence 356999999999999999999854 4567999987643 23456788999999999 79999999999887 78899
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||+.+++|.+++... ..++...+..++.+++.||.|||+.|++||||||+||++ +..+.+||+|||++..+..
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeeccC
Confidence 99999999999998763 357788889999999999999999999999999999999 6678899999999987654
Q ss_pred CCceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
+..... .....| .-+-++.+.++.+++. |..+|+........ .+............+.+-..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN 234 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHH
Confidence 322111 000111 1122344778888886 77777643321100 00000000001122222222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.+ -++++.+++.|++..++..+|..
T Consensus 235 ~i---~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 235 IM---MRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HH---HHHcccCcccCcCHHHHHHHHhc
Confidence 22 25677888888888888887754
No 240
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.94 E-value=9.9e-26 Score=217.09 Aligned_cols=149 Identities=23% Similarity=0.332 Sum_probs=131.0
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||+|+.+. +.+.||+|.+.... .....+.+.+|+++++++ +|+||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence 458999999999999999999754 34679999875432 233567789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
..|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEEE
Confidence 9999999999999999987655 68999999999999999999999999999999999999 66788999
Q ss_pred Eeecccccc
Q 040003 274 IDFGLSMFF 282 (489)
Q Consensus 274 ~DFGla~~~ 282 (489)
+|||++...
T Consensus 159 ~~~~~~~~~ 167 (275)
T cd05046 159 SLLSLSKDV 167 (275)
T ss_pred ccccccccc
Confidence 999998754
No 241
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=8.9e-26 Score=215.60 Aligned_cols=150 Identities=31% Similarity=0.500 Sum_probs=136.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|++.... ....+.+.+|+++++++ +||||+++++++.+...+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEE
Confidence 56999999999999999999999999999999997542 23567889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhh
Confidence 9999999999988765 789999999999999999999999999999999999999 6678899999999987653
No 242
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.94 E-value=4.7e-26 Score=218.73 Aligned_cols=143 Identities=22% Similarity=0.287 Sum_probs=121.5
Q ss_pred ceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.+++.+ +||||+++++++.+....|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence 36999999999999754 355679999886442 233445788899999999 8999999999999999999999999
Q ss_pred CCCchHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 212 AGGELFDRIIQRG-----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 212 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
++|+|.+++.... ..+...+..++.|++.|+.|||+.||+||||||+||++ +..+.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNK 150 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccc
Confidence 9999999986432 34566778899999999999999999999999999999 66788999999999754
No 243
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94 E-value=1.4e-25 Score=218.04 Aligned_cols=238 Identities=20% Similarity=0.204 Sum_probs=168.7
Q ss_pred ceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|.+.+.||+|+||.||+|.+.. ++..+++|.+... .......+.+|+++++++ +|+||+++++++.....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCc
Confidence 48899999999999999998543 4567889887532 334456788999999999 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 204 VHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
.++||||+.+++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---cc
Confidence 99999999999999998653 237888999999999999999999999999999999999 66
Q ss_pred CCCeEEEeeccccccCCCCceee----eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV----WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~----~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||++........... +....| . -+-++.+.++.+++. |..+|....-.... .+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 78899999999976543321110 001111 1 112344777888876 77765432110000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
............+.+-.+ -+-+++..|++.|++..++.+.|.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~---li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 239 TQGRVLERPRVCPKEVYD---IMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred hCCCCCCCCccCCHHHHH---HHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 000000001112222111 233667888899999999998887764
No 244
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94 E-value=5.8e-26 Score=216.94 Aligned_cols=235 Identities=21% Similarity=0.236 Sum_probs=166.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++++ +|+||+++++++. ....|+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEE
Confidence 356999999999999999999865 567899999865432 235788999999999 7999999999874 457899
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+.+++|.+++... ..++...+..++.|++.||+|||+.||+||||||+||++ +.++.++|+|||++..+..
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecCC
Confidence 99999999999988653 358888999999999999999999999999999999999 6678899999999987653
Q ss_pred CCceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... .....| .-+-++.+.++.+++. |..+|....-+... .+............+.+-.+
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYE 234 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 221110 000011 1122344777888886 77777543211100 00000000011112222222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
. +-+++..+++.|.+.+++..+|..
T Consensus 235 l---i~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 235 L---MRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred H---HHHHccCChhhCCCHHHHHHHhhc
Confidence 2 235678888888888888887754
No 245
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.94 E-value=4.8e-26 Score=216.95 Aligned_cols=232 Identities=21% Similarity=0.205 Sum_probs=163.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEE-EeCCeEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAY-EDAVAVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~-~~~~~~~lv 207 (489)
.|++.+.||+|+||.||++... +..||+|.+... ...+.+.+|+.+++.+ +|+||+++++++ ......|+|
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEEE
Confidence 5899999999999999999764 778999988532 2345788999999999 899999999975 455679999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+++++|.+++...+ .+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceecccc
Confidence 99999999999987654 37889999999999999999999999999999999999 66788999999999865432
Q ss_pred Cceee----------eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 286 LTFRV----------WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 286 ~~~~~----------~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
..... +....+. -+-++.+.++.+++. |+.+++...+.... .+.+..........+..-... +
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---i 232 (256)
T cd05082 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDV---M 232 (256)
T ss_pred CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHH---H
Confidence 21110 0011110 111244777888875 77766543321100 000000001111222222222 2
Q ss_pred HhhhcCCCCCCccHHHHHHHHHH
Q 040003 352 FKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+++..+++.|.+..++...|..
T Consensus 233 ~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 233 KQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHHhc
Confidence 35677788889999998887754
No 246
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94 E-value=1.2e-25 Score=215.27 Aligned_cols=148 Identities=26% Similarity=0.445 Sum_probs=132.5
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC---CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT---TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
|++++.||+|+||.||+|.. .+++.+|+|.+...... .......+.+|+++++++ +|+||+++++++.+....|+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred ccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEE
Confidence 78889999999999999986 47889999998654321 223446788999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||+.+++|.+++.+.+.+++..+..++.|++.+|.|||+.||+|+||||+||++ +.++.+||+|||++...
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRL 152 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhh
Confidence 99999999999999887889999999999999999999999999999999999999 67788999999999865
No 247
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.94 E-value=6.7e-26 Score=216.50 Aligned_cols=234 Identities=19% Similarity=0.214 Sum_probs=163.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+. .+..+|+|.+..... ..+.+.+|+.+++++ +|+||+++++++. ....|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEEE
Confidence 56999999999999999999865 556799999875432 235688999999999 8999999999885 4568999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++... ..+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceeeeeccCc
Confidence 9999999999988653 358899999999999999999999999999999999999 56778999999999876443
Q ss_pred Cceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... .....| .-+-.+.+.++.+++. |..+|....-.... .+............+..-.+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHE- 234 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH-
Confidence 21111 000011 1222344677777776 66666542210000 00000000001111221111
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+.+++..+++.|++..++...|..
T Consensus 235 --li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 235 --LMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --HHHHHcccCcccCcCHHHHHHHHhc
Confidence 1235677788888888888777653
No 248
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=2.8e-25 Score=214.22 Aligned_cols=233 Identities=20% Similarity=0.295 Sum_probs=170.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~l 206 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.+. .||||+++++++.+....|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 3788899999999999999999999999999986432 2344567889999999994 39999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+.+++|.+++.. +.+++..+..++.|++.+|.|||+.||+||||+|+||++ +..+.++|+|||++..+....
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCCc
Confidence 9999999999988754 578999999999999999999999999999999999999 667889999999998775433
Q ss_pred ceee------------eeecc--C--CCCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhh-hhccHHHHHHH
Q 040003 287 TFRV------------WLRLH--F--LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIA-ESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~------------~~~~~--y--pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l 348 (489)
.... .+... + .-+-++.+.++.+++.|..+|......... .+.......+. ...+.+-.+.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 235 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFV 235 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHH
Confidence 2111 11111 0 112234577888999998877543321111 11111000011 11233333333
Q ss_pred HHHHhhhcCCCCCCccHHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+ .++..|++.|++..|+..
T Consensus 236 ~---~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 236 A---ACLDEEPKERLSAEELLK 254 (277)
T ss_pred H---HHcCCCcccCcCHHHHhh
Confidence 3 467778888999888754
No 249
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.94 E-value=3.5e-26 Score=231.27 Aligned_cols=274 Identities=21% Similarity=0.311 Sum_probs=203.5
Q ss_pred eeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..|.++||.|.||.||+|+.+..|+ .||||.++.. ..+..+..|+.|+.||.++ +||||++|.|.......+.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEE
Confidence 4578899999999999999887664 6999998653 5677888999999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.|||++|+|..+|..+ |.|...++..+++-|..|++||-+.|+|||||-..|||+ +.+...|++||||++.+.++
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecccC
Confidence 99999999999999765 789999999999999999999999999999999999999 78889999999999988543
Q ss_pred C-ceee----------------------------------eeeccC---CCCcchhHHHHHHHhcccccCCC-CCCCCCC
Q 040003 286 L-TFRV----------------------------------WLRLHF---LFFQKQRQSVLQTRLVRNLNEPG-SLWPDKV 326 (489)
Q Consensus 286 ~-~~~~----------------------------------~~~~~y---pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~ 326 (489)
. ..+. |-...| |||..++..++..|..| |..|. -+.|.
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRLPpPmDCP~-- 861 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRLPPPMDCPA-- 861 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCCCCCCCCcH--
Confidence 3 1111 112223 88888888888888766 33332 11111
Q ss_pred CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHH---------HHHHHHccCCCCCc
Q 040003 327 AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE---------IDGLMQAGDIDNSG 397 (489)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~---------i~~l~~~~D~d~~g 397 (489)
-+.+| +.+++-+|..-+....++...|.++-.++..-+ -..++..--.|...
T Consensus 862 -----------------aL~qL--MldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~~ 922 (996)
T KOG0196|consen 862 -----------------ALYQL--MLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFTP 922 (996)
T ss_pred -----------------HHHHH--HHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCcc
Confidence 12222 336667788889999999999888754442211 12233333344445
Q ss_pred ceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHH
Q 040003 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTA 443 (489)
Q Consensus 398 ~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~ 443 (489)
..+..||+.++..- ..++.|. ..|+.+.+.+.++
T Consensus 923 f~sv~~WL~aIkm~-------rY~~~F~-----~ag~~s~~~V~q~ 956 (996)
T KOG0196|consen 923 FRSVGDWLEAIKMG-------RYKEHFA-----AAGYTSFEDVAQM 956 (996)
T ss_pred cCCHHHHHHHhhhh-------HHHHHHH-----hcCcccHHHHHhh
Confidence 56778888776421 1223342 3566666666555
No 250
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94 E-value=1.3e-25 Score=213.86 Aligned_cols=185 Identities=18% Similarity=0.315 Sum_probs=147.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~lv~ 208 (489)
|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+++++++ +|+||+++++.+.. ...+|+||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEEe
Confidence 8999999999999999999999999999999865432 334556788999999999 89999999998864 44689999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+++++|.+++... ..+++..+..++.+++.+|.+||++||+||||||+||++ +.++.+||+|||++..+....
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEecccC
Confidence 999999999988763 458999999999999999999999999999999999999 667889999999998764322
Q ss_pred ceee--eeeccC-----------C--CCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV--WLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~--~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ..+..| . -+-.+.+.++.+++.|...|..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 204 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA 204 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 1111 011111 0 1122446777888888776653
No 251
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.94 E-value=4.3e-26 Score=193.34 Aligned_cols=145 Identities=38% Similarity=0.636 Sum_probs=136.2
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~ 415 (489)
...++++++++++++|..+|.|++|.|+..||..+|+.+|..+++.++.+++..+|. +++.|+|.+|+.+|.... ...
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~ 89 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD 89 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC
Confidence 357899999999999999999999999999999999999999999999999999999 999999999999997654 556
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.++++..+|+.||+|+||+|+..||+.+|+.+| +++++++.|++.+|.|+||.|+|++|++++...+
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~ 158 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP 158 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence 689999999999999999999999999999999 8999999999999999999999999999887643
No 252
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=1.3e-25 Score=217.49 Aligned_cols=152 Identities=25% Similarity=0.406 Sum_probs=131.8
Q ss_pred ceeecceeccCCceEEEEEEE----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--C
Q 040003 129 MYSLGRKLGQGQFGTTFLCVE----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--V 202 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~ 202 (489)
.|++++.||+|+||.||+|.. ..+++.||+|.+... ........+.+|+++++.+ +||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc--ccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence 478999999999999999974 457889999998643 2344556789999999999 899999999998775 5
Q ss_pred eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..|+||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCccccc
Confidence 789999999999999988654 358899999999999999999999999999999999999 5678899999999987
Q ss_pred cCCCC
Q 040003 282 FRPGL 286 (489)
Q Consensus 282 ~~~~~ 286 (489)
+....
T Consensus 159 ~~~~~ 163 (284)
T cd05079 159 IETDK 163 (284)
T ss_pred cccCc
Confidence 75443
No 253
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94 E-value=1.3e-25 Score=217.06 Aligned_cols=184 Identities=19% Similarity=0.186 Sum_probs=143.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+|+.||+|.+..... . .....+..|+.++.+..+||||+++++++......|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-S-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-c-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 48899999999999999999999999999999875432 2 223456667776545448999999999999999999999
Q ss_pred eecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||++ |+|.+++.. ...+++..+..++.|++.||.|||++ +++||||||+|||+ +.++.+||+|||++..+.
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccc
Confidence 9996 578776653 23689999999999999999999997 99999999999999 677889999999998764
Q ss_pred CCCcee-e----------eee-----ccC--CCCcchhHHHHHHHhcccccCC
Q 040003 284 PGLTFR-V----------WLR-----LHF--LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 284 ~~~~~~-~----------~~~-----~~y--pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.....+ . ++. ..| .-+-++.+.++.+++.|.++|.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence 322111 0 111 111 1122345788888888887764
No 254
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.7e-27 Score=208.88 Aligned_cols=177 Identities=24% Similarity=0.481 Sum_probs=146.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.+.|++.+++|+|.|+.||.|....+.+.++||+++.- ..+.+.||+.||..|++|||||++++...+. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 35699999999999999999999999999999998642 3478899999999998899999999998764 457
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
.||+||+.+.+...+. ..++..+++.++.+++.||.|||+.||+|||+||.|+++.. ....++|+|+|||.++.+
T Consensus 111 aLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hhceeeeeecchHhhcCC
Confidence 7999999887665443 35788899999999999999999999999999999999943 455699999999999999
Q ss_pred CCceeeeeeccC---------------CCCcchhHHHHHHHhccc
Q 040003 285 GLTFRVWLRLHF---------------LFFQKQRQSVLQTRLVRN 314 (489)
Q Consensus 285 ~~~~~~~~~~~y---------------pf~~~~~~~~~~~i~~~~ 314 (489)
+..+.+-....| -.+.++.+|++..++-.+
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk 230 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 230 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhcc
Confidence 999887222221 233456688777665443
No 255
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=1e-25 Score=215.41 Aligned_cols=151 Identities=26% Similarity=0.460 Sum_probs=137.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|.+.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.+ +|+||+++++++.....+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence 388899999999999999999999999999998765432 45678899999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++...+.+++..+..++.+++.||.|||++||+||||||+||++ +..+.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKN 151 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCC
Confidence 999999999999877778999999999999999999999999999999999999 6678899999999987653
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94 E-value=2.6e-25 Score=215.50 Aligned_cols=153 Identities=25% Similarity=0.445 Sum_probs=131.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-----
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----- 199 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----- 199 (489)
...+.|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+.+||||+++++++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 34567999999999999999999999999999999875421 123567789999999967999999999873
Q ss_pred eCCeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
.....|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+||++ +.++.+||+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCCEEEcc
Confidence 45679999999999999987753 2468889999999999999999999999999999999999 6677899999
Q ss_pred eccccccCC
Q 040003 276 FGLSMFFRP 284 (489)
Q Consensus 276 FGla~~~~~ 284 (489)
||+++....
T Consensus 168 fg~~~~~~~ 176 (286)
T cd06638 168 FGVSAQLTS 176 (286)
T ss_pred CCceeeccc
Confidence 999987643
No 257
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=2.7e-25 Score=216.67 Aligned_cols=186 Identities=27% Similarity=0.326 Sum_probs=151.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
....|++.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++.....+|
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEE
Confidence 34569999999999999999999999999999999865432 2346788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+.+++|..++.. ..+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhcccc
Confidence 99999999999987754 468999999999999999999999999999999999999 66788999999998876543
Q ss_pred Cceee--eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... ..+..| . -+-++.+.++.+++.|..+|..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~ 217 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22111 011111 1 1123447788888888877753
No 258
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.94 E-value=2.8e-26 Score=222.04 Aligned_cols=150 Identities=27% Similarity=0.444 Sum_probs=131.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|++..+|+.||+|.+..... .......+.+|+++++++ +||||+++++++.+...+|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence 38889999999999999999999999999999865432 222335677899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+. ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++.+..
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGI 151 (284)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCC
Confidence 9996 478777765 4678999999999999999999999999999999999999 6678899999999986643
No 259
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.94 E-value=1.3e-25 Score=217.12 Aligned_cols=152 Identities=27% Similarity=0.425 Sum_probs=132.6
Q ss_pred cceeecceeccCCceEEEEEEEcC----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 201 (489)
+.|++.+.||+|+||.||+|.... +++.+|+|++..... ....+.+.+|+++++.+ +|+||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE--EQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc--hHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence 347888999999999999998653 478999999875432 24567899999999999 89999999999877 5
Q ss_pred CeEEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
...|+||||+++++|.+++.... .++...+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEccccccc
Confidence 68999999999999999987654 58999999999999999999999999999999999999 667889999999999
Q ss_pred ccCCC
Q 040003 281 FFRPG 285 (489)
Q Consensus 281 ~~~~~ 285 (489)
.....
T Consensus 158 ~~~~~ 162 (284)
T cd05038 158 VLPED 162 (284)
T ss_pred ccccC
Confidence 87643
No 260
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-28 Score=235.47 Aligned_cols=186 Identities=25% Similarity=0.367 Sum_probs=165.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
++++..||-||||.|-++........+|+|++++..+.+..+.+.+..|-.||..+ +.|.||++|..|.+..++|++||
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhhHH
Confidence 55667799999999999987766667999999999998888889999999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce-
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF- 288 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~- 288 (489)
-|-||.|...|..+|.|.+..++.++.-++.|++|||++|||.|||||+|+|| +.+|.+||.|||+|+.+..+...
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~KTw 577 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRKTW 577 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCcee
Confidence 99999999999999999999999999999999999999999999999999999 88999999999999999877654
Q ss_pred eeeeeccC---------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 289 RVWLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 289 ~~~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+...+..| .||. .+.++.+++.|.++|.+..
T Consensus 578 TFcGTpEYVAPEIILnKGHD~avDyWa--LGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 578 TFCGTPEYVAPEIILNKGHDRAVDYWA--LGILIYELLTGSPPFSGVD 623 (732)
T ss_pred eecCCcccccchhhhccCcchhhHHHH--HHHHHHHHHcCCCCCCCCc
Confidence 33334344 4544 4788899999999998643
No 261
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94 E-value=1.7e-25 Score=215.13 Aligned_cols=151 Identities=25% Similarity=0.430 Sum_probs=134.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-------CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-------TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence 388899999999999999999999999999988642211 112245688999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
...++||||+.+++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||+++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence 9999999999999999999888889999999999999999999999999999999999999 6778899999999976
Q ss_pred cC
Q 040003 282 FR 283 (489)
Q Consensus 282 ~~ 283 (489)
..
T Consensus 158 ~~ 159 (272)
T cd06629 158 SD 159 (272)
T ss_pred cc
Confidence 53
No 262
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94 E-value=1.1e-25 Score=217.96 Aligned_cols=186 Identities=22% Similarity=0.280 Sum_probs=150.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.++||+|+||.||+|.+..+++.||+|.+.+.... ....+.+.+|+++++.+ +||||+++++++.+....|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEE
Confidence 589999999999999999999989999999998654322 23446688999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|..+....+.+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.+||+|||++..+......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCccc
Confidence 999998888776666678999999999999999999999999999999999999 66788999999999876443221
Q ss_pred e-e-eeecc------------CC--CCcchhHHHHHHHhcccccCCC
Q 040003 289 R-V-WLRLH------------FL--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~-~-~~~~~------------yp--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. . +.... +. -+..+.+.++.+++.|...|+.
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 1 0 11111 11 1123447788888888776653
No 263
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.7e-27 Score=232.70 Aligned_cols=225 Identities=22% Similarity=0.246 Sum_probs=171.7
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCC
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGG 214 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g 214 (489)
+||+|+||+||.|+++.|....|||.|..+ .....+-+..||.+.++| +|.|||+++|++.+++++-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 599999999999999999999999999653 345667889999999999 7999999999999999999999999999
Q ss_pred chHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 215 ELFDRIIQR-GHY--TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 215 ~L~~~l~~~-~~~--~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
+|.++|... |++ .+.....+.+||+.||.|||++.|||||||-+|+|++ +-.|.+||.|||-++.+..-.-.+.
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCccccc
Confidence 999999754 666 7888999999999999999999999999999999996 4578999999999988754333222
Q ss_pred -eeeccC---------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcc----hhhhhhccHHHHHHHHH
Q 040003 291 -WLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGD----RVIAESLSEEEIAGLKE 350 (489)
Q Consensus 291 -~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 350 (489)
.++.+| +-+-++.+|.+-++-.|+++|-.-..|... .-+.+. .-++..++.+....+.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-MFkVGmyKvHP~iPeelsaeak~Fil- 813 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-MFKVGMYKVHPPIPEELSAEAKNFIL- 813 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-hhhhcceecCCCCcHHHHHHHHHHHH-
Confidence 222233 223345577777778888887654433321 111111 1233445554444444
Q ss_pred HHhhhcCCCCCCccHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~ 369 (489)
++|..|+..+.+..+|.
T Consensus 814 --rcFepd~~~R~sA~~LL 830 (1226)
T KOG4279|consen 814 --RCFEPDPCDRPSAKDLL 830 (1226)
T ss_pred --HHcCCCcccCccHHHhc
Confidence 56777777787777763
No 264
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=1.5e-25 Score=218.17 Aligned_cols=150 Identities=25% Similarity=0.376 Sum_probs=128.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe-----
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA----- 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~----- 203 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.+.+||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4899999999999999999999999999999886532 1222335678899999999667999999999987665
Q ss_pred EEEEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeec
Q 040003 204 VHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFG 277 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFG 277 (489)
.|+|||||.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~---~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV---DKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---ecCCCeEEEeecc
Confidence 8999999986 788887543 347999999999999999999999999999999999999 44 6789999999
Q ss_pred cccccC
Q 040003 278 LSMFFR 283 (489)
Q Consensus 278 la~~~~ 283 (489)
+++.+.
T Consensus 157 ~~~~~~ 162 (295)
T cd07837 157 LGRAFS 162 (295)
T ss_pred cceecC
Confidence 998654
No 265
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=1.6e-25 Score=213.19 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=151.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
|+..+.||+|+||+||+|....+++.|++|.+..... ......+.+.+|+++++.+ +|+||+++++++.+...+|+|
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEEE
Confidence 7778899999999999999998999999999865432 2234557889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||||+||++ +.++.+||+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceecccccc
Confidence 9999999999999877778999999999999999999999999999999999999 6678899999999987644321
Q ss_pred eee-ee-----------ecc-C--CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WL-----------RLH-F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~-----------~~~-y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... .. ... + .-+-.+.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~ 204 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQ 204 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 110 00 111 1 11112347788888888877653
No 266
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=227.51 Aligned_cols=165 Identities=26% Similarity=0.415 Sum_probs=143.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeC
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDA 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~ 201 (489)
.|..++.||+|+||.|++|.++.....|+||.|.+.++-.. ..+-.+-.||+||..|. .|+||++++++|++.
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 39999999999999999999999999999999987654321 12234567999999993 299999999999999
Q ss_pred CeEEEEEeec-CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELC-AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
+++||+||-- +|.+|++++..+..++|.++..|++|++.|+++||+.||||||||-+|+.+ +.+|-+||+|||.|.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsaa 718 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSAA 718 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccchh
Confidence 9999999965 346999999988999999999999999999999999999999999999999 888999999999999
Q ss_pred ccCCCCceeeeeeccC
Q 040003 281 FFRPGLTFRVWLRLHF 296 (489)
Q Consensus 281 ~~~~~~~~~~~~~~~y 296 (489)
....|..-..+.+..|
T Consensus 719 ~~ksgpfd~f~gtv~~ 734 (772)
T KOG1152|consen 719 YTKSGPFDVFVGTVDY 734 (772)
T ss_pred hhcCCCcceeeeeccc
Confidence 9887766555555554
No 267
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=2.2e-25 Score=213.03 Aligned_cols=186 Identities=24% Similarity=0.308 Sum_probs=155.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.++.++ +|+||+++++++......++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEE
Confidence 48889999999999999999999999999999865432 24567889999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+.+++|.+++...+.+++..+..++.|++.++.|||+ .|++||||+|+||++ +.++.++|+|||++..+.....
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 999999999999887889999999999999999999999 999999999999999 6778899999999987754333
Q ss_pred ee--eeeeccC-----------CC--CcchhHHHHHHHhcccccCCCC
Q 040003 288 FR--VWLRLHF-----------LF--FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~--~~~~~~y-----------pf--~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. ......| ++ +-.+.+.++.+++.|.+++...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 21 1111111 11 2234577888888888877544
No 268
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94 E-value=6.5e-26 Score=218.64 Aligned_cols=153 Identities=35% Similarity=0.592 Sum_probs=139.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++++.+||||+++++++.+....++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 48999999999999999999999999999999977555555556788899999999934999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++...+.+++..+..++.|++.||.+||++|++|+||||+||++ +.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCC
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999987653
No 269
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=7.4e-26 Score=216.39 Aligned_cols=180 Identities=27% Similarity=0.393 Sum_probs=148.1
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||.|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+....|+||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 79999999999999999999999999876554455567899999999999 89999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee-eeeec
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR-VWLRL 294 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~ 294 (489)
|.+++.+...+++..+..++.|++.||.|||++|++|+||||+||++ +.++.+||+|||++.......... ...+.
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCCc
Confidence 99999887788999999999999999999999999999999999999 667889999999998775542111 01111
Q ss_pred cC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 295 HF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 295 ~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.| . -+-.+.+.++.+++.|..++..
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 11 0 1112346677778777776653
No 270
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.94 E-value=8.9e-26 Score=220.84 Aligned_cols=219 Identities=22% Similarity=0.284 Sum_probs=161.0
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
++-||.|+.|.||+|+.. ++.||||+++.- -..+|+-|++| +|||||.+.|+|...-.+|||||||.
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhc-cCcceeeEeeeecCCceeEEeeeccc
Confidence 567999999999999864 678999987421 13588899999 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
.|-|+..|+....+.......|..+|+.|+.|||.+.|||||||.-||||. .+..|||+|||-++.+....+.-.
T Consensus 196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999994 455699999999998765433211
Q ss_pred ----ee-----ecc-C--CCCcchhHHHHHHHhcccccCCCC-----CCCCCCCCCCCcchh-hhhhccHHHHHHHHHHH
Q 040003 291 ----WL-----RLH-F--LFFQKQRQSVLQTRLVRNLNEPGS-----LWPDKVAVPPIGDRV-IAESLSEEEIAGLKEMF 352 (489)
Q Consensus 291 ----~~-----~~~-y--pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~F 352 (489)
|. +.. . -.+.++.+.++-+++.|+++|.+- +|.-. ...+.. ++....+--.-.++
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG----sNsL~LpvPstcP~GfklL~K--- 345 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG----SNSLHLPVPSTCPDGFKLLLK--- 345 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc----CCcccccCcccCchHHHHHHH---
Confidence 11 111 0 122345588899999999988753 34211 111111 11111121122222
Q ss_pred hhhcCCCCCCccHHHHHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+++...+..+.+..++..-|.-
T Consensus 346 qcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 346 QCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred HHHhcCCCCCccHHHHHHHHhh
Confidence 4556667778877776555443
No 271
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.94 E-value=1.7e-25 Score=219.50 Aligned_cols=152 Identities=22% Similarity=0.353 Sum_probs=130.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.+.|++.+.||+|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++++ +|+||+++++++.+. ..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeE
Confidence 356999999999999999999999999999999987543221 2223456899999999 899999999998765 568
Q ss_pred EEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++..+.
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecC
Confidence 999999965 78877765 3568999999999999999999999999999999999999 667889999999998765
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 160 ~ 160 (309)
T cd07845 160 L 160 (309)
T ss_pred C
Confidence 4
No 272
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94 E-value=1.3e-25 Score=217.07 Aligned_cols=235 Identities=20% Similarity=0.232 Sum_probs=165.2
Q ss_pred ceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|.+.++||+|+||.||+|... .++..+|+|.+... .......+.+|+++++.+ +|+||+++++++.+...
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCc
Confidence 4788899999999999999743 35678999987542 345567899999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 204 VHVVMELCAGGELFDRIIQRG---------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
.|+||||+.+++|.+++...+ .+++..+..++.|++.|+.|||++||+||||||+|||+ +.+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---cCC
Confidence 999999999999999987643 47888899999999999999999999999999999999 567
Q ss_pred CCeEEEeeccccccCCCCceee----eeeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFRV----WLRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVP 329 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~ 329 (489)
+.+||+|||+++.......... .....| . -+.++.+.++.+++. |..+|....-.... .+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 8899999999976543222111 001111 1 122344677777775 66655332110000 000
Q ss_pred CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 330 PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
...........+.. +..+ +..++..|+..|.+.+|+...|.
T Consensus 239 ~~~~~~~~~~~~~~-~~~l--i~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 QGRELERPRTCPPE-VYAI--MQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cCccCCCCCCCCHH-HHHH--HHHHccCChhhCCCHHHHHHHHh
Confidence 00000011122222 2222 23567788888999999887664
No 273
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94 E-value=1.2e-25 Score=214.77 Aligned_cols=236 Identities=22% Similarity=0.249 Sum_probs=166.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||.||+|.+. .++.+|+|.+..... ....+.+|+.+++++ +|+||+++++++......|+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEE
Confidence 356999999999999999999875 457899999875432 235688999999999 79999999999999899999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+.+++|.+++... ..++...+..++.+++.|+.|||++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccceeccc
Confidence 99999999999998764 368899999999999999999999999999999999999 6678899999999987653
Q ss_pred CCceee---eeeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... .....| + -+-++.+.++.+++. |..+|......... .+............+.+ ..
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 234 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEE-LY 234 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHH-HH
Confidence 211000 000111 0 111233667777776 77666532210000 00000000001111111 11
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.-+.+++..+++.|.+.+|+...|..
T Consensus 235 --~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 235 --DLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --HHHHHHcccCcccCCCHHHHHHHHhc
Confidence 12345677888888888888777643
No 274
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94 E-value=2.4e-25 Score=221.07 Aligned_cols=187 Identities=26% Similarity=0.333 Sum_probs=147.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-----V 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~ 202 (489)
..|.+.+.||+|+||+||+|++..+++.||||.+.... ........+.+|+.+++.+ +|+||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhc-CCCCccchHHheecccccccC
Confidence 46999999999999999999999999999999986532 2233445677899999999 899999999987644 3
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
..|+||||+. ++|.+++...+.+++..+..++.|++.||.|||+++|+||||||+|||+ +.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCcccccc
Confidence 5899999995 6899888877889999999999999999999999999999999999999 66788999999999876
Q ss_pred CCCCceee--eeecc------------C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 283 RPGLTFRV--WLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 283 ~~~~~~~~--~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
........ ..+.. + .-+-++.+.++.+++.|...|+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 159 SEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred CCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 54321110 11111 1 111234467777777777766543
No 275
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.94 E-value=2e-25 Score=214.48 Aligned_cols=238 Identities=21% Similarity=0.230 Sum_probs=164.2
Q ss_pred cceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|.+.++||+|+||.||+|.+... ...||+|..... ......+.+.+|+.+++.+ +||||+++++++.+ ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--TSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc--CCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCc
Confidence 4588999999999999999987654 356899987543 2245567889999999999 79999999998876 467
Q ss_pred EEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+|+|.+++.... .++...+..++.+++.||.|||++|++||||||+|||+ +..+.+||+|||+++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeeecc
Confidence 89999999999999987643 58999999999999999999999999999999999999 567789999999998764
Q ss_pred CCCceeee---eeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHH
Q 040003 284 PGLTFRVW---LRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~~---~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 345 (489)
....+... ....| . -+-++.+.++.+++. |..+|....-.... .+...........++.+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 238 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHH
Confidence 43221110 00011 1 112234666666663 66665432211000 0000000001112222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..+. +++..+++.|.+..|+...|..+
T Consensus 239 ~li~---~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 239 SLMT---KCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred HHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 2222 45677888888888888877664
No 276
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=1.3e-25 Score=216.51 Aligned_cols=232 Identities=22% Similarity=0.297 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|+.+++++ +||||+++++++......|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEE
Confidence 45888899999999999999999999999999986432 234557889999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+++|.+++. .+.+++..+..++.+++.|+.|||++||+|+||||+||++ +.++.+||+|||++..+.....
T Consensus 81 ~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 81 MEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEccCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCcch
Confidence 99999999998775 4578999999999999999999999999999999999999 5677899999999987654321
Q ss_pred eee--eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHH
Q 040003 288 FRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 288 ~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
... .....| .+ +-.+.+.++.+++.|..++.... +... .+.......+....+.+-.+.+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li-- 233 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH-PMRVLFLIPKNSPPTLEGQYSKPFKEFV-- 233 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc-hhhHHhhhhcCCCCCCCcccCHHHHHHH--
Confidence 111 011111 11 11234778888888877664321 1100 0000000011111222222222
Q ss_pred HHhhhcCCCCCCccHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~ 370 (489)
-.++..+++.|.+..|+..
T Consensus 234 -~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 234 -EACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -HHHccCCcccCcCHHHHHH
Confidence 2466778888888888765
No 277
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1e-25 Score=211.74 Aligned_cols=199 Identities=22% Similarity=0.319 Sum_probs=157.5
Q ss_pred cccccccccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-C----C
Q 040003 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-P----N 190 (489)
Q Consensus 116 ~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-p----n 190 (489)
|..+-.....+..+|.+.+.+|+|+||.|-.|++..++..||+|+++.- ....+..+-|+++|.++..+ | -
T Consensus 77 GH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~r 152 (415)
T KOG0671|consen 77 GHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFR 152 (415)
T ss_pred ceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceE
Confidence 4444455566678899999999999999999999999999999998632 34556677899999999433 2 3
Q ss_pred eeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--
Q 040003 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-- 266 (489)
Q Consensus 191 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-- 266 (489)
+|.+.+||...++.|||+|.+ |.++++++..++ +++...++.+..|++.++.+||+++++|-||||+|||+.+.+
T Consensus 153 cv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 153 CVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred EEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceE
Confidence 788999999999999999998 679999998754 689999999999999999999999999999999999996421
Q ss_pred ---------------CCCCeEEEeeccccccCCCCceeeeeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 267 ---------------EEAPLKTIDFGLSMFFRPGLTFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 267 ---------------~~~~~kl~DFGla~~~~~~~~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
....|||+|||.|++-.... .+.+.+++| |=+-++.+||+-++..|..-|.
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 13469999999999876555 334555555 3334455666666666665555
Q ss_pred CC
Q 040003 319 GS 320 (489)
Q Consensus 319 ~~ 320 (489)
..
T Consensus 311 tH 312 (415)
T KOG0671|consen 311 TH 312 (415)
T ss_pred cC
Confidence 43
No 278
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.94 E-value=4e-26 Score=202.74 Aligned_cols=235 Identities=23% Similarity=0.231 Sum_probs=173.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----CC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-----AV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-----~~ 202 (489)
++|++.+.||+|||+.||++....+++.||+|+|.-. ..++.+..++||+..+++ +||||++++++... ..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCce
Confidence 5799999999999999999999999999999999654 356778899999999999 89999999887643 34
Q ss_pred eEEEEEeecCCCchHHHHHHc---C-CCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 AVHVVMELCAGGELFDRIIQR---G-HYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~---~-~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
..||++.|...|+|.+.+... | .+++.++..|+.+|+.||++||+.. ++||||||+|||+ ...+.++|.||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceEEEec
Confidence 599999999999999998643 3 6899999999999999999999999 9999999999999 55778999999
Q ss_pred ccccccCCCCceee-----------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCC-
Q 040003 277 GLSMFFRPGLTFRV-----------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV- 326 (489)
Q Consensus 277 Gla~~~~~~~~~~~-----------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 326 (489)
|.+....-...-.. +++.....| +.+++++.++-|.-+|....-....
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIW--SLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIW--SLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchh--hhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 99876542111000 122222333 4488888888887777533221111
Q ss_pred --CCCCCcchhhh--hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 --AVPPIGDRVIA--ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 --~~~~~~~~~~~--~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
++... ...++ ...++.-.+.++ .++-+|+..|.+..||..-+..+
T Consensus 252 aLAv~n~-q~s~P~~~~yse~l~~lik---~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 252 ALAVQNA-QISIPNSSRYSEALHQLIK---SMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred EEeeecc-ccccCCCCCccHHHHHHHH---HHhcCCcccCCCHHHHHHHHHhh
Confidence 11110 00011 123333333333 45778888899999987766543
No 279
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94 E-value=3.1e-25 Score=214.80 Aligned_cols=185 Identities=25% Similarity=0.389 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++++ +||||+++++++......|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEe
Confidence 388999999999999999999999999999998765422 33456788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+ +++|.+++... ..+++..++.++.||+.+|.|||++||+|+||||+||++ +..+.++|+|||++........
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCC
Confidence 999 99999988653 568999999999999999999999999999999999999 6678899999999987754331
Q ss_pred --e-ee----------eeec--cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 288 --F-RV----------WLRL--HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 --~-~~----------~~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+ .. ++.+ .+ .-+-++.+.++.+++.|...|..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 1 11 1111 11 11223457788888888665543
No 280
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=2.4e-25 Score=212.39 Aligned_cols=144 Identities=28% Similarity=0.420 Sum_probs=123.9
Q ss_pred eeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||+|.+. .++..||+|++... ......+.+.+|+.+++++ +||||+++++++.. ...|+||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE--NEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc--cChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 4899999999999765 44567999988653 2344556789999999999 89999999998864 57899999999
Q ss_pred CCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 213 GGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 213 ~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+++|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 148 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGAD 148 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCC
Confidence 9999998875 4578999999999999999999999999999999999999 66788999999999866443
No 281
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.94 E-value=5.8e-25 Score=210.46 Aligned_cols=186 Identities=23% Similarity=0.273 Sum_probs=152.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||.|+||+||+|....++..+|+|++...... .....+.+|+.+|+.+ +|+||+++++.+......|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEE
Confidence 589999999999999999999989999999998654322 2567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||+.+++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhccC
Confidence 999999999998763 458999999999999999999999999999999999999 66788999999999877644
Q ss_pred Ccee----e--eeec------------cCC--CCcchhHHHHHHHhcccccCCCC
Q 040003 286 LTFR----V--WLRL------------HFL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 286 ~~~~----~--~~~~------------~yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... . ..+. .+. -+-++.+.++.+++.|..+|...
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence 3221 0 0111 111 11234477888888888777543
No 282
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.94 E-value=2.7e-25 Score=212.34 Aligned_cols=233 Identities=21% Similarity=0.328 Sum_probs=161.1
Q ss_pred eecceeccCCceEEEEEEEc----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEK----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
++.+.||.|.||.||+|... ..+..|+||.+.. .......+.+.+|+++++++ +||||+++++++......++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~--~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP--SSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST--TSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc--ccccccceeeeecccccccc-cccccccccccccccccccc
Confidence 45678999999999999987 4567899999943 23455678899999999999 89999999999998888999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.+|+|.++|... ..++......++.||+.||.|||+++|+|+||+++|||+ +.++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence 99999999999999886 678999999999999999999999999999999999999 6677899999999988743
Q ss_pred CCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCC-CCCCCCcchhhhhhccHHHH
Q 040003 285 GLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDK-VAVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 345 (489)
...... .....| .+.. .+.+.++.+++. +..++....-... ..+.+..........+..-.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIY 235 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHH
Confidence 322211 111111 0111 133667777777 5555543210000 00000000111122233322
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l 372 (489)
. -+-.+++.|++.|.+..|+...|
T Consensus 236 ~---li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 S---LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp H---HHHHHT-SSGGGS--HHHHHHHH
T ss_pred H---HHHHHcCCChhhCcCHHHHHhcC
Confidence 2 24477888999999999886644
No 283
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=4e-25 Score=213.24 Aligned_cols=150 Identities=30% Similarity=0.515 Sum_probs=133.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++++ +||||+++++++..+...|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEE
Confidence 45888999999999999999999899999999886432 234456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+.+++|.+++. .+.++...+..++.+++.++.+||+.||+|+||||+||++ +.++.++|+|||++..+..
T Consensus 81 ~e~~~~~~l~~~i~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 81 MEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTD 153 (277)
T ss_pred EEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceeccc
Confidence 99999999998875 4578999999999999999999999999999999999999 6678899999999976644
No 284
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.94 E-value=3e-25 Score=215.31 Aligned_cols=150 Identities=23% Similarity=0.361 Sum_probs=130.8
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++++ +||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC--cCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCC
Confidence 459999999999999999998753 6788999998643 2344456788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
..|+||||+.+|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999986432 367778899999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+ +.++.+||+|||++..+.
T Consensus 162 l~---~~~~~~~l~dfg~~~~~~ 181 (288)
T cd05050 162 LV---GENMVVKIADFGLSRNIY 181 (288)
T ss_pred Ee---cCCCceEECccccceecc
Confidence 99 667889999999998654
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=2.5e-25 Score=211.67 Aligned_cols=187 Identities=25% Similarity=0.315 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|.+..+++.+|+|.+...... ......+.+|+++|+.+ +||||+++++.+......++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence 388999999999999999999999999999999765433 34567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+++++|.+++... ..+++..+..++.+++.++.|||++||+||||||+||++.. ....+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccCCCceecCCCc
Confidence 999999999998764 34889999999999999999999999999999999999932 34468999999998765432
Q ss_pred ceee-eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... +....| .-+-++.+.++.+++.|...|..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc
Confidence 2111 111111 11223446777788877766643
No 286
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.94 E-value=1.7e-25 Score=214.23 Aligned_cols=151 Identities=30% Similarity=0.499 Sum_probs=133.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeeccc--CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK--LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~--~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .........+.+|+++++++ +|+||+++++++.+. ..+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCEE
Confidence 4999999999999999999999999999999875422 12234567889999999999 799999999998764 568
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++||||+.+++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccccc
Confidence 9999999999999999877788999999999999999999999999999999999999 667789999999998764
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.94 E-value=2.1e-25 Score=212.36 Aligned_cols=149 Identities=32% Similarity=0.507 Sum_probs=132.4
Q ss_pred eecceeccCCceEEEEEEEcCCC----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+..|+.+++.+ +|+||+++++++.+....|+
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEE
Confidence 46788999999999999998766 899999986442 223567889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||+.+++|.+++..... +++..+..++.|++.||.+||+.||+||||||+||++ +.++.+||+|||++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceeccc
Confidence 9999999999999876543 8999999999999999999999999999999999999 6677899999999987765
Q ss_pred C
Q 040003 285 G 285 (489)
Q Consensus 285 ~ 285 (489)
.
T Consensus 156 ~ 156 (258)
T smart00219 156 D 156 (258)
T ss_pred c
Confidence 4
No 288
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94 E-value=2.4e-25 Score=216.29 Aligned_cols=186 Identities=25% Similarity=0.398 Sum_probs=150.0
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
|++.+.||+|+||.||+|.+. .+|+.||+|++...... .....+.+.+|+++++.+.+|+||+.+++++......|
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 788999999999999999874 47899999998753321 12234667889999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+++++|.+++.....+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceecccc
Confidence 999999999999999888889999999999999999999999999999999999999 66788999999999876543
Q ss_pred Ccee---eeeeccC---------------CCCcchhHHHHHHHhcccccCC
Q 040003 286 LTFR---VWLRLHF---------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~---~~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.... ......| .-+-++.+.++.+++.|..++.
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 2111 0111111 1112344778888888887764
No 289
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94 E-value=3.2e-25 Score=213.45 Aligned_cols=184 Identities=23% Similarity=0.368 Sum_probs=151.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.+ +|+||+++++++.+...+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEEE
Confidence 4888999999999999999999999999999986542 234456788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|.+++... .+++..+..++.|++.|+.|||+.+|+||||+|+||++ +.++.++|+|||+++.+......
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeecccccc
Confidence 999999999988654 78999999999999999999999999999999999999 66788999999999887643211
Q ss_pred e--eeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 289 R--VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~--~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ...+..| .+ +-++.+.++.+++.|..+|..
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~ 200 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD 200 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 1 1111111 11 113447788888888887753
No 290
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.94 E-value=2.1e-25 Score=213.06 Aligned_cols=234 Identities=19% Similarity=0.211 Sum_probs=161.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+..+||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+++++.+ +|+||+++++++.. ...|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVSE-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-CCcEEE
Confidence 4599999999999999999987655 4699998764322 235678899999999 79999999998854 568999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++... ..++...+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||+++....+
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCC
Confidence 9999999999998654 247888899999999999999999999999999999999 67788999999999876433
Q ss_pred Cceee---eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... ..+..| . -+-.+.+.++.+++. |..+|.+..-.... .+............+..-.+.
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHEL 235 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHH
Confidence 21110 001111 0 111234667777776 77666543210000 000000000111122221122
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+ -+++..|++.|.+.+++.+.|+.
T Consensus 236 i---~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 236 M---KLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred H---HHHccCCcccCcCHHHHHHHHhc
Confidence 2 24677788888888888877753
No 291
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94 E-value=3.4e-25 Score=210.22 Aligned_cols=142 Identities=26% Similarity=0.412 Sum_probs=125.0
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCC
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGG 214 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g 214 (489)
.||+|+||.||+|... ++..+|+|.+.... .......+.+|+++++.+ +||||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 6899999999999864 67899999886432 334445788999999999 8999999999999999999999999999
Q ss_pred chHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 215 ELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 215 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|.+++... ..+.+..+..++.+++.+|.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQED 144 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceecc
Confidence 999988653 457899999999999999999999999999999999999 667889999999997654
No 292
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.94 E-value=1.2e-25 Score=219.92 Aligned_cols=239 Identities=16% Similarity=0.177 Sum_probs=165.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|+..+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence 358889999999999999999887776 46888775432 233345688999999999 899999999998754 5
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++++||+.+|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccccc
Confidence 679999999999999987653 58889999999999999999999999999999999999 56678999999999876
Q ss_pred CCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........ .....| ++ +-++.+.++.+++. |..++....+.... .+............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTI- 238 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH-
Confidence 53322110 001111 11 11244666777664 65555432211100 0000000000011111
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.. ..-+..++..+++.+.++.|+...|.++.
T Consensus 239 ~~--~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 239 DV--YMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred HH--HHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 12 22245677788888999999888877653
No 293
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=3e-25 Score=212.03 Aligned_cols=186 Identities=24% Similarity=0.333 Sum_probs=149.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 206 (489)
.|++.+.||.|+||.||+|.+..++..||+|.+..... .....+.+.+|+++++.+ +||||+++++++.. ....|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEE
Confidence 38889999999999999999999999999999875443 345567889999999999 89999999998754 457899
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACH-----SLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH-----~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
+|||+.+++|.+++.. ...+++..+..++.+|+.||.||| +.+|+||||||+||++ +.++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEeccc
Confidence 9999999999998865 357899999999999999999999 8999999999999999 667889999999
Q ss_pred cccccCCCCceee--eeeccC-----------C--CCcchhHHHHHHHhcccccCCC
Q 040003 278 LSMFFRPGLTFRV--WLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 278 la~~~~~~~~~~~--~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
++........... ..+..| . .+-.+.+.++.+++.|..++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 9988755442111 111111 1 1123446677788888776654
No 294
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.94 E-value=3.3e-25 Score=211.06 Aligned_cols=151 Identities=26% Similarity=0.564 Sum_probs=134.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++++ +||||+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence 388999999999999999999999999999998754332 34456789999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++.... .+++..+..++.|++.|+.|||++|++|+||+|+|||+ +.++.++|+|||++..+..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCc
Confidence 9999999999886542 57889999999999999999999999999999999999 6677899999999987644
No 295
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=8.6e-26 Score=221.91 Aligned_cols=143 Identities=20% Similarity=0.185 Sum_probs=115.2
Q ss_pred cceeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeE-EEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQ-IVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~-~~~~~~~~~~ 203 (489)
+.|.+.+.||+|+||+||+|+++. +++.||||++..... ......+.+.+|+++|++| +|+||+. ++++ +.
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~----~~ 92 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT----GK 92 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc----CC
Confidence 459999999999999999999876 677789998753211 1233456799999999999 7999985 5432 46
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL-KPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDl-Kp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|||||||+|++|.. +. ... ...++.+++.+|.|||++||||||| ||+|||+ +.++.+||+|||+|+.+
T Consensus 93 ~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 93 DGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDGEAAVIDFQLASVF 162 (365)
T ss_pred cEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCCCEEEEECccceec
Confidence 899999999999963 21 111 1467899999999999999999999 9999999 56678999999999988
Q ss_pred CCC
Q 040003 283 RPG 285 (489)
Q Consensus 283 ~~~ 285 (489)
...
T Consensus 163 ~~~ 165 (365)
T PRK09188 163 RRR 165 (365)
T ss_pred ccC
Confidence 654
No 296
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=9.4e-25 Score=214.98 Aligned_cols=238 Identities=20% Similarity=0.247 Sum_probs=168.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|...+.||+|+||.||+|.+..++..||+|.+.............+.+|+++++.+ +|||++++++++.+....|+
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 102 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWL 102 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEE
Confidence 34588899999999999999999999999999998765444455567889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||+.| +|.+.+.. ...+++..+..++.+++.|+.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 103 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 103 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPA 178 (317)
T ss_pred EEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCCc
Confidence 9999975 77777654 4568999999999999999999999999999999999999 66788999999998766543
Q ss_pred Cceee--------ee----eccCC--CCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCc-chhhhhhccHHHHHHHH
Q 040003 286 LTFRV--------WL----RLHFL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIG-DRVIAESLSEEEIAGLK 349 (489)
Q Consensus 286 ~~~~~--------~~----~~~yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~ 349 (489)
..... ++ .+.+. -+.++.+.++.+++.|..+|......... .+.... ........+..-.+.+.
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 258 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVD 258 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHH
Confidence 22111 00 01111 11234477888888887765432110000 000000 00001112222122222
Q ss_pred HHHhhhcCCCCCCccHHHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+++..++.+|++..++...+
T Consensus 259 ---~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 259 ---SCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ---HHccCCcccCcCHHHHHhCh
Confidence 46677888888888876543
No 297
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=1.7e-25 Score=216.58 Aligned_cols=185 Identities=24% Similarity=0.319 Sum_probs=148.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||.|+||.||+|.+..+++.||||.+..... .......+.+|+++++++ +||||+++++++.+....|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEee
Confidence 8889999999999999999999999999998865332 222345788999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+. ++|..++.. .+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++..+.....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCcc
Confidence 995 588888755 3568999999999999999999999999999999999999 6778899999999876543221
Q ss_pred ee--e----------eeec-c-C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FR--V----------WLRL-H-F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~--~----------~~~~-~-y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. . ++.+ . + .-+-++.+.++.+++.|...|+..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 10 0 1111 1 1 112234577888999998877643
No 298
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=7e-26 Score=216.36 Aligned_cols=146 Identities=32% Similarity=0.463 Sum_probs=132.5
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||.|+||.||+|++..+++.+|+|++...........+.+.+|+++++++ +||||+++++.+......|+||||+.+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 68999999999999999999999999765444445667899999999999 79999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.+++...+.+++..+..++.|++.||.|||++||+||||+|+||++ +.++.+||+|||++......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccC
Confidence 99999887789999999999999999999999999999999999999 67788999999998865443
No 299
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=8.8e-25 Score=214.16 Aligned_cols=188 Identities=23% Similarity=0.326 Sum_probs=150.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|.+.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+++++.+ +||||+++++++.+....|
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEE
Confidence 345699999999999999999999999999999998755444555667889999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+. |+|.+.+.. .+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.+||+|||++.....
T Consensus 92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCC
Confidence 9999997 467666653 4568999999999999999999999999999999999999 6678899999999976643
Q ss_pred CCceee--------ee----eccC--CCCcchhHHHHHHHhcccccCC
Q 040003 285 GLTFRV--------WL----RLHF--LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 285 ~~~~~~--------~~----~~~y--pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
...... ++ .+.| .-+-++.+.++.+++.|..++.
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 322110 11 1111 1112344778888888876654
No 300
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=4.8e-25 Score=214.24 Aligned_cols=184 Identities=21% Similarity=0.224 Sum_probs=144.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.+ +|+||+++++++......|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999865432 12223567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+. ++|...+... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCC
Confidence 99995 6777766543 467888899999999999999999999999999999999 667889999999987543211
Q ss_pred ce-e-e----------eeec--cCC--CCcchhHHHHHHHhcccccCC
Q 040003 287 TF-R-V----------WLRL--HFL--FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~-~-~----------~~~~--~yp--f~~~~~~~~~~~i~~~~~~~~ 318 (489)
.. . . ++.+ .+. -+-.+.+.++.+++.|...|.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 10 0 0 1111 111 112344678888888877664
No 301
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94 E-value=2.2e-25 Score=216.85 Aligned_cols=152 Identities=24% Similarity=0.336 Sum_probs=132.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 205 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|.++..... ......+.+|+.+++++ +||||+++++++... ...|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEE
Confidence 3589999999999999999999999999999999754322 22334567899999999 799999999999877 8999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+ +|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+..
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeeccC
Confidence 99999974 8988886543 58999999999999999999999999999999999999 6678899999999987654
Q ss_pred C
Q 040003 285 G 285 (489)
Q Consensus 285 ~ 285 (489)
.
T Consensus 159 ~ 159 (293)
T cd07843 159 P 159 (293)
T ss_pred C
Confidence 3
No 302
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.93 E-value=3.9e-25 Score=214.82 Aligned_cols=148 Identities=26% Similarity=0.354 Sum_probs=130.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.++.+++.||+|.+...... .....+.+|+++++.+ +|+||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEE
Confidence 4599999999999999999999999999999998654221 1223466899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||+.+ +|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAK 153 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECcccccccc
Confidence 999975 898888654 467899999999999999999999999999999999999 67788999999998754
No 303
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=4.5e-25 Score=209.47 Aligned_cols=143 Identities=28% Similarity=0.427 Sum_probs=127.5
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
++||+|+||.||+|.+.. ++.||+|.+..... ......+.+|+++++++ +|+||+++++++.+....|+||||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 369999999999999877 99999998865432 24567889999999999 899999999999999999999999999
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 214 GELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 214 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++|.+++... ..++...+..++.+++.+|.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEE 144 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeecccccccc
Confidence 9999998653 467888999999999999999999999999999999999 667889999999998654
No 304
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.93 E-value=6e-25 Score=208.66 Aligned_cols=154 Identities=27% Similarity=0.472 Sum_probs=139.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+++++++ +||||+++++++.+....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence 388899999999999999999999999999999765432 35667899999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+.+++|.+++...+.+++..+..++.|++.+|.+||++||+||||||+||++ +.++.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCcc
Confidence 999999999999887889999999999999999999999999999999999999 5678899999999988765443
No 305
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.93 E-value=9.4e-25 Score=207.77 Aligned_cols=183 Identities=24% Similarity=0.342 Sum_probs=150.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|.+... ...+.+.+|+++++.+ +||||+++++++.+...+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-----EDLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-----HHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEE
Confidence 4699999999999999999999988999999998643 1267899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+++|.+++.. ...+++..+..++.|++.|+.|||+.||+||||+|+||++ +.++.+||+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCc
Confidence 999999999999865 3568999999999999999999999999999999999999 667889999999998775443
Q ss_pred ceeee--eeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 287 TFRVW--LRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~--~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... ....| .+. -++.+.++.+++.|..++..
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~ 201 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 21111 11111 111 12346778888888777653
No 306
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.93 E-value=4.7e-25 Score=213.36 Aligned_cols=186 Identities=23% Similarity=0.331 Sum_probs=147.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.++||+|++|.||+|++..+++.||+|.+..... ......+.+|+.+++.+ +|+||+++++++.+.+..|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEe
Confidence 8899999999999999999999999999999875432 22345677899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+.+ +|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCCc
Confidence 9975 888887654 358999999999999999999999999999999999999 667889999999997653321
Q ss_pred ce--eeeeeccC----------CC----CcchhHHHHHHHhcccccCCCCCC
Q 040003 287 TF--RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 287 ~~--~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
.. ....+..| .+ +-++.+.++.+++.|...|....+
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 206 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN 206 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 10 00111111 01 112346778888888887765443
No 307
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.93 E-value=4.3e-25 Score=217.28 Aligned_cols=179 Identities=24% Similarity=0.357 Sum_probs=137.0
Q ss_pred cceeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE--eCCeEEEEE
Q 040003 133 GRKLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE--DAVAVHVVM 208 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~~~~~lv~ 208 (489)
+++||+|+||+||+|++.. +++.||+|.+..... ...+.+|+++|+.+ +||||+++++++. ....+|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence 4689999999999999754 568899999864322 23567899999999 8999999999885 356789999
Q ss_pred eecCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEeecc
Q 040003 209 ELCAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDFGL 278 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DFGl 278 (489)
||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99864 787776421 247888899999999999999999999999999999999543 3467899999999
Q ss_pred ccccCCCCce-----eeeeeccC----------C----CCcchhHHHHHHHhcccccCC
Q 040003 279 SMFFRPGLTF-----RVWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 279 a~~~~~~~~~-----~~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~ 318 (489)
|+.+...... ..+.+..| . -+-++.+.++.+++.|...|.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 9876543211 00112122 1 122355788999999988775
No 308
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.93 E-value=8.3e-25 Score=216.32 Aligned_cols=145 Identities=20% Similarity=0.260 Sum_probs=127.8
Q ss_pred ecceeccC--CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 132 LGRKLGQG--QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 132 ~~~~lG~G--~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
++++||+| +||+||+++++.+|+.||+|.+..... .....+.+.+|+++++.+ +||||++++++|...+..|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 789999999999999999999865432 234456788899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||++|+|.+++..+ ..+++..+..++.|++.||.|||++|||||||||+|||+ +.++.++++|||.+..
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLS 150 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhc
Confidence 99999999998653 458999999999999999999999999999999999999 6677899999986543
No 309
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93 E-value=7.1e-25 Score=210.38 Aligned_cols=180 Identities=22% Similarity=0.244 Sum_probs=142.6
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
..||+|+||.||+|.+..++..||+|.+... .....+.+.+|+.+++.+ +|+||+++++++......++||||+.+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCCC
Confidence 4799999999999999999999999988643 234557889999999999 899999999999999999999999999
Q ss_pred CchHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee
Q 040003 214 GELFDRIIQR-GHY--TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290 (489)
Q Consensus 214 g~L~~~l~~~-~~~--~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~ 290 (489)
++|.+++... +.+ ++..+..++.||+.||.|||++||+||||||+||++.. ..+.+||+|||++...........
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~~ 167 (268)
T cd06624 90 GSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGTSKRLAGINPCTE 167 (268)
T ss_pred CCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchhheecccCCCccc
Confidence 9999998764 445 78888899999999999999999999999999999932 256799999999976543211110
Q ss_pred ------------ee-ecc--C--CCCcchhHHHHHHHhcccccCCC
Q 040003 291 ------------WL-RLH--F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ------------~~-~~~--y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
++ ... | .-+-.+.+.++.+++.|..++..
T Consensus 168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 11 111 1 11123446788888888777653
No 310
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93 E-value=5.5e-25 Score=211.50 Aligned_cols=185 Identities=23% Similarity=0.308 Sum_probs=148.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
.++|++.+.||+|+||.||+|.+..+++.+++|++.... .....+.+|+.+++++.+|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 356999999999999999999999899999999986532 234678899999999967999999999997644
Q ss_pred --eEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 --AVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+|+||||+.+++|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEECCC
Confidence 58999999999999988764 3578999999999999999999999999999999999999 66788999999
Q ss_pred ccccccCCCCceee--eeeccC------------------CCCcchhHHHHHHHhcccccCC
Q 040003 277 GLSMFFRPGLTFRV--WLRLHF------------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 277 Gla~~~~~~~~~~~--~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
|++........... ..+..| .-+.++.+.++.+++.|..+|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 219 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcc
Confidence 99876543221111 001011 1122344778888888887775
No 311
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=1.5e-24 Score=210.36 Aligned_cols=186 Identities=23% Similarity=0.310 Sum_probs=147.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 206 (489)
.|+..+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.+ +||||++++++|.+ ...+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEE
Confidence 4888999999999999999999999999999987542 224457789999999999 79999999998865 347899
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||++ +.++.+||+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeeccccccc
Confidence 9999999999887643 3458889999999999999999999999999999999999 56678999999998765
Q ss_pred CCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 283 RPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 283 ~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.............| .+. ..+.+.++.+++.|.+++...
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 156 VNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred cccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 43221111111111 111 123477888999998888755
No 312
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93 E-value=3.1e-25 Score=212.34 Aligned_cols=185 Identities=22% Similarity=0.281 Sum_probs=151.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.++.+++.+|+|.+.... .......+.+|+++++++ +||||+++++++.....+|+||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEE
Confidence 4788899999999999999999999999999987643 234557788999999999 6999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+.+++|.+++... ..+++..+..++.|++.++.|||+ .|++||||||+||++ +.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHHHH
Confidence 999999999998765 788999999999999999999999 999999999999999 667889999999987664322
Q ss_pred ceeeeeec-----------cCCC--CcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRL-----------HFLF--FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~-----------~ypf--~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+. .|.+ +..+.+.++..++.|..++..
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP 201 (265)
T ss_pred hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 11111111 1111 123457788888888877754
No 313
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=1.9e-25 Score=222.28 Aligned_cols=186 Identities=23% Similarity=0.335 Sum_probs=145.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|+++|+.+ +||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence 4567999999999999999999999999999999986432 2334456788999999999 8999999999987653
Q ss_pred ---eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 ---AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+|+||||+ +++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccc
Confidence 468999999 778877664 4578999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceeeeeecc------------CCC--CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRVWLRLH------------FLF--FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~------------ypf--~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.......... ..+.. +.. +-++.+.++.+++.|...|..
T Consensus 166 ~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 166 RQTDSEMTGY-VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cccccCcccc-ccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8664322110 00111 111 112336677778888776654
No 314
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=7.3e-26 Score=232.00 Aligned_cols=188 Identities=23% Similarity=0.395 Sum_probs=154.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----C
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-----A 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-----~ 201 (489)
.+.|++...||.|.+|.||+++++.+++..|+|++... ...-+++..|.+||+.++.|||++.++++|.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC----ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 45699999999999999999999999999999997543 22335677899999999999999999999853 5
Q ss_pred CeEEEEEeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
+++|||||||.||+..|+++. ..++.|..+..|++.++.||.+||.+.+||||||-.|||| +.++.|||+|||++
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVDFGVS 170 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEeeeeee
Confidence 789999999999999998865 3578999999999999999999999999999999999999 77888999999999
Q ss_pred cccCCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 280 MFFRPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
.........+... -++|||...+.+-..+-....|+...+.|
T Consensus 171 aQldsT~grRnT~-iGtP~WMAPEViac~e~~d~tyd~R~D~W 212 (953)
T KOG0587|consen 171 AQLDSTVGRRNTF-IGTPYWMAPEVIACDESPDATYDYRSDLW 212 (953)
T ss_pred eeeecccccccCc-CCCcccccceeeecccCCCCCcccccchh
Confidence 9886554433322 35699998554444444444455556677
No 315
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=2.8e-27 Score=250.75 Aligned_cols=238 Identities=22% Similarity=0.265 Sum_probs=179.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++.-+|.-+..||.|.||.||.|.+..+|...|+|-|+-.... ......+.+|..+|..+ +|||+|++||+-.+...+
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecHHHH
Confidence 3444577788999999999999999999999999998754433 44556788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|.||||+||+|.+.+...+..++...+.+..|++.|+.|||++|||||||||+||+| +.+|.+|++|||.|..+..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecC
Confidence 9999999999999988777778888888999999999999999999999999999999 7788999999999998876
Q ss_pred CC-ceee-----eeeccC----------------CCCcchhHHHHHHHhcccccCC--CCCCCCCCCCCCCcchhhhhhc
Q 040003 285 GL-TFRV-----WLRLHF----------------LFFQKQRQSVLQTRLVRNLNEP--GSLWPDKVAVPPIGDRVIAESL 340 (489)
Q Consensus 285 ~~-~~~~-----~~~~~y----------------pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 340 (489)
.. +... +++.-| .-+-++.+|++-++..|+-++. +..|.--..|..--...++..+
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~l 1466 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERL 1466 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhh
Confidence 53 1111 222222 1112344777777777765443 2333111111111223344456
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+-.+.|. .|+-.|+..+.+..+|..
T Consensus 1467 s~~g~dFle---~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1467 SSEGRDFLE---HCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred hHhHHHHHH---HHHhcCchhhhHHHHHHH
Confidence 666666665 567788888877766543
No 316
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=2.7e-25 Score=211.57 Aligned_cols=144 Identities=26% Similarity=0.393 Sum_probs=125.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||++. .+++.||+|.+... ...+.+.+|+.+++.+ +||||+++++++... ..|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-----VTAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-----chHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEE
Confidence 359999999999999999986 46788999998542 1235788999999999 899999999998765 47999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.+++|.+++.... .++...+..++.|++.||.|||++|++||||||+|||+ +.++.+||+|||++....
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGS 151 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecc
Confidence 99999999999987643 47888999999999999999999999999999999999 667889999999997654
No 317
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-26 Score=210.33 Aligned_cols=186 Identities=22% Similarity=0.346 Sum_probs=164.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+|.+|.+++++.|.+.||+|++++......++...++.|-.+..+.++||.+|.+..+|+....+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 56999999999999999999999999999999999988888888999999999999998999999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc-CCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF-RPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~-~~~~ 286 (489)
.||+.||+|.-++.+..+++++.++.+...|+.||.|||++|||.||||.+|+|| +..|++||+|+|+++.- .+++
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCCc
Confidence 9999999998888888899999999999999999999999999999999999999 88999999999999864 4554
Q ss_pred ceee-----------eeec-cC----CCCcchhHHHHHHHhcccccCC
Q 040003 287 TFRV-----------WLRL-HF----LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~~~-----------~~~~-~y----pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
+... ++++ .| .||. .+.++.+++.|+-+|.
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwa--lgvlmfemmagrspfd 452 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWA--LGVLMFEMMAGRSPFD 452 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHH--HHHHHHHHHcCCCCcc
Confidence 4332 3332 23 3433 3778888888887775
No 318
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=1.1e-24 Score=211.93 Aligned_cols=187 Identities=22% Similarity=0.299 Sum_probs=144.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++++ +||||+++++++.+....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence 359999999999999999999999999999999865432 223345678899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+. ++|.+++..... +++..+..++.||+.||+|||++||+||||||+||++.. ..+.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence 99995 588887765433 577888899999999999999999999999999999942 3456999999999765322
Q ss_pred Cce-e-e----------eeeccCCC----CcchhHHHHHHHhcccccCCC
Q 040003 286 LTF-R-V----------WLRLHFLF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~-~-~----------~~~~~ypf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... . . ++.+..++ +-.+.+.++.+++.|...|..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 110 0 0 11111111 112346778888888877754
No 319
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.93 E-value=4.7e-25 Score=213.02 Aligned_cols=239 Identities=17% Similarity=0.136 Sum_probs=165.9
Q ss_pred cceeecceeccCCceEEEEEEEcC----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~ 202 (489)
+.|++.+.||+|+||.||+|.+.. ++..|++|.+... ......+.+.+|+.+|+.+ +||||+++++++.. ..
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGE 82 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCC
Confidence 459999999999999999999876 3578999987532 3455567889999999999 89999999998765 57
Q ss_pred eEEEEEeecCCCchHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 203 AVHVVMELCAGGELFDRIIQR--------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
..++++||+.+++|.+++... ..+++..+..++.+++.||+|||+++|+||||||+|||+ +.++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEEEC
Confidence 789999999999999998653 357899999999999999999999999999999999999 667889999
Q ss_pred eeccccccCCCCceee---------e-----e-eccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchh
Q 040003 275 DFGLSMFFRPGLTFRV---------W-----L-RLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRV 335 (489)
Q Consensus 275 DFGla~~~~~~~~~~~---------~-----~-~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~ 335 (489)
|||+++.+........ + + ...| .-+-++.+.++.+++. |..+|....-.... .+.......
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 239 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA 239 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC
Confidence 9999987644322110 0 0 0001 1111234667777776 76666432100000 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.....+. .+.. -+..++..|++.|.+..|+...|..+
T Consensus 240 ~~~~~~~-~~~~--li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 240 QPINCPD-ELFA--VMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CCCcCCH-HHHH--HHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0011111 1211 22356667778888888888777654
No 320
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93 E-value=6.3e-25 Score=213.72 Aligned_cols=186 Identities=26% Similarity=0.336 Sum_probs=150.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
....|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+++.+ +||||+++++++......|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~ 92 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELW 92 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEE
Confidence 3457999999999999999999998899999999985432 23346788999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+++++|.+++.. ..+++..+..++.|++.|+.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred EEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceeccccc
Confidence 99999999999998754 467889999999999999999999999999999999999 66788999999998766543
Q ss_pred Cceeeee--e-----------ccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRVWL--R-----------LHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~~~--~-----------~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....... + ..+ .-+-++.+.++.+++.|..+|..
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~ 217 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3211100 0 111 11123447788888888887754
No 321
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93 E-value=8.8e-25 Score=211.34 Aligned_cols=149 Identities=27% Similarity=0.448 Sum_probs=130.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe------C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~ 201 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|++... ......+..|+.+++++.+|+||+++++++.. .
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 91 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD 91 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence 4599999999999999999999999999999998643 23445688899999999779999999999853 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|+|||||.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++
T Consensus 92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~~ 168 (282)
T cd06636 92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVS 168 (282)
T ss_pred CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcch
Confidence 6789999999999999988653 357888899999999999999999999999999999999 66778999999998
Q ss_pred cccC
Q 040003 280 MFFR 283 (489)
Q Consensus 280 ~~~~ 283 (489)
....
T Consensus 169 ~~~~ 172 (282)
T cd06636 169 AQLD 172 (282)
T ss_pred hhhh
Confidence 7653
No 322
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.93 E-value=6.2e-25 Score=212.86 Aligned_cols=186 Identities=23% Similarity=0.325 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++.+ +|+||+++++++...+..|+||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEE
Confidence 59999999999999999999999999999999865432 233457789999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT- 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~- 287 (489)
||+.++.+..+......+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCccc
Confidence 999987776666555679999999999999999999999999999999999999 6688899999999987654432
Q ss_pred -ee-eeeeccC----------C----CCcchhHHHHHHHhcccccCCC
Q 040003 288 -FR-VWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 -~~-~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. .+.+..| . -+-.+.+.++.+++.|...|+.
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11 0111111 1 1122346778888888776653
No 323
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93 E-value=1.6e-24 Score=210.62 Aligned_cols=188 Identities=20% Similarity=0.253 Sum_probs=148.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC---
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--- 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 201 (489)
...+.|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++.+||||+++++++...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 34567999999999999999999999999999999986432 22356778999999997799999999998653
Q ss_pred --CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 202 --VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
...|+||||+.+++|.+++.. ...+++..++.++.|++.||+|||+.||+||||||+||++ +.++.+||+|
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~d 171 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVD 171 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEee
Confidence 468999999999999988753 3568999999999999999999999999999999999999 6677899999
Q ss_pred eccccccCCCCceee--eeeccC------------------CCCcchhHHHHHHHhcccccCCC
Q 040003 276 FGLSMFFRPGLTFRV--WLRLHF------------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 276 FGla~~~~~~~~~~~--~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
||++..+........ ..+..| .-+-++.+.++.+++.|..+|..
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~ 235 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFD 235 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCC
Confidence 999886543221100 000111 11223457788888888877754
No 324
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=1.1e-24 Score=207.51 Aligned_cols=144 Identities=29% Similarity=0.412 Sum_probs=126.9
Q ss_pred ceeccCCceEEEEEEEcC-CC--cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVEKA-TQ--KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~-~~--~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
++||+|+||.||+|.+.. .+ ..||+|.+...... ...+.+.+|+.+++++ +||||+++++++.+ ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999998865 33 36999998765432 5667899999999999 89999999999988 899999999
Q ss_pred cCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 211 CAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 211 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||+++.+..
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEeccccccccccc
Confidence 99999999987654 68899999999999999999999999999999999999 6668899999999988754
No 325
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93 E-value=3.9e-25 Score=210.79 Aligned_cols=145 Identities=16% Similarity=0.182 Sum_probs=122.4
Q ss_pred ceeccCCceEEEEEEEcCCC----------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 134 RKLGQGQFGTTFLCVEKATQ----------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~----------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.||+|+||.||+|.+..++ ..+++|.+.... .....+.+|+.+|+.+ +||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence 36999999999999998776 347777764332 1157788999999999 79999999999988 78
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC----CCCCeEEEeecc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ----EEAPLKTIDFGL 278 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~----~~~~~kl~DFGl 278 (489)
.|+||||+.+|+|.+++...+ .++...+..++.||+.||.|||++||+||||||+|||+.... ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999997765 789999999999999999999999999999999999994322 112699999999
Q ss_pred ccccCC
Q 040003 279 SMFFRP 284 (489)
Q Consensus 279 a~~~~~ 284 (489)
+.....
T Consensus 155 a~~~~~ 160 (259)
T cd05037 155 PITVLS 160 (259)
T ss_pred cccccc
Confidence 987543
No 326
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=2.7e-25 Score=222.40 Aligned_cols=140 Identities=19% Similarity=0.309 Sum_probs=125.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||.||+|++..+++.||+|+..+. ....|+.+++++ +||||+++++++......|+||
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEEE
Confidence 499999999999999999999999999999975432 234699999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||+. ++|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++..
T Consensus 137 e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 137 PHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCcccccc
Confidence 9995 5888888653 568999999999999999999999999999999999999 67788999999999754
No 327
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.93 E-value=1e-24 Score=217.97 Aligned_cols=186 Identities=21% Similarity=0.327 Sum_probs=146.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.+++.+ +||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence 3466999999999999999999999999999999986432 2334456778899999999 899999999988643
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|+|||||. ++|.+.+... +++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccc
Confidence 35799999996 4888877543 8899999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.......... ..+..| ++ +-++.+.++.+++.|...|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 87644322111 111112 11 123447788888888877754
No 328
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-25 Score=193.49 Aligned_cols=152 Identities=23% Similarity=0.310 Sum_probs=130.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
....+..||+|+||.|-+.++..+|...|+|.++... ..+...++++|+.+..+...+|.+|++||.+.+.+.+||.|
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 3455678999999999999999999999999997543 34566788899999888878999999999999999999999
Q ss_pred eecCCCchHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRI----IQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l----~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|.|. .+|..+. .+.+.++|..+-.++..++.||.|||++ .|||||+||+|||+ +..|++|+||||++..+.
T Consensus 125 E~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 125 ELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeeh
Confidence 9995 4664433 3456899999999999999999999975 89999999999999 888999999999998775
Q ss_pred CCC
Q 040003 284 PGL 286 (489)
Q Consensus 284 ~~~ 286 (489)
+..
T Consensus 201 dSi 203 (282)
T KOG0984|consen 201 DSI 203 (282)
T ss_pred hhh
Confidence 543
No 329
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.93 E-value=3.9e-25 Score=219.32 Aligned_cols=188 Identities=25% Similarity=0.318 Sum_probs=149.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE----eCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----DAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~ 203 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+|+.+ +||||+++++++. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-DVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-ccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCce
Confidence 56999999999999999999999999999999987542 2223456778899999999 7999999999875 3457
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceeec
Confidence 899999995 5898888777789999999999999999999999999999999999999 678889999999997654
Q ss_pred CCCcee------eeeecc------------C--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 284 PGLTFR------VWLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 284 ~~~~~~------~~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
...... .+.+.. | .-+-++.+.++.+++.|...|....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~ 216 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence 321100 011111 1 1222345788888888888886543
No 330
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93 E-value=1.5e-25 Score=218.10 Aligned_cols=186 Identities=23% Similarity=0.296 Sum_probs=148.6
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...+.|.....||+|+||.||++.+..++..||||.+... .....+.+.+|+.+++.+ +|+||+++++.+...+..
T Consensus 19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~ 94 (292)
T cd06658 19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDEL 94 (292)
T ss_pred chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeE
Confidence 3445577778899999999999999999999999998543 234456788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+.+++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 95 ~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~ 170 (292)
T cd06658 95 WVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSK 170 (292)
T ss_pred EEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhccc
Confidence 99999999999988764 4578999999999999999999999999999999999999 6678899999999976543
Q ss_pred CCceee--eeeccC---------CC----CcchhHHHHHHHhcccccCC
Q 040003 285 GLTFRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 285 ~~~~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
...... ..+..| ++ +-++.+.++.+++.|..+|.
T Consensus 171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 219 (292)
T cd06658 171 EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF 219 (292)
T ss_pred ccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 222111 111111 11 11234677788888877664
No 331
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.93 E-value=7e-25 Score=217.62 Aligned_cols=153 Identities=25% Similarity=0.399 Sum_probs=132.0
Q ss_pred cccceee-cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHH-----------HHHHHHHHHHHHHHhcCCCCeeE
Q 040003 126 LKEMYSL-GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE-----------DVEDVRREIRIMHHLAGHPNVIQ 193 (489)
Q Consensus 126 ~~~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~-----------~~~~~~~E~~~l~~l~~hpniv~ 193 (489)
+.++|.. .+.||+|+||+||+|++..+++.||+|++......... ....+.+|+++++.+ +|+||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence 3455764 57799999999999999999999999998654322100 012467899999999 8999999
Q ss_pred EEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 194 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
+++++......|+||||+. |+|.+++.....+++..+..++.|++.||+|||+.||+||||||+||++ +.++.+||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~kl 160 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKI 160 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEEE
Confidence 9999999999999999996 5899998887889999999999999999999999999999999999999 66788999
Q ss_pred EeeccccccC
Q 040003 274 IDFGLSMFFR 283 (489)
Q Consensus 274 ~DFGla~~~~ 283 (489)
+|||++..+.
T Consensus 161 ~dfg~~~~~~ 170 (335)
T PTZ00024 161 ADFGLARRYG 170 (335)
T ss_pred CCccceeecc
Confidence 9999998664
No 332
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93 E-value=5e-25 Score=214.87 Aligned_cols=182 Identities=23% Similarity=0.281 Sum_probs=146.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.....||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEE
Confidence 35666789999999999999999999999999865432 2346688999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+++++|..++. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+......
T Consensus 98 e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 98 EFLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred ecCCCCCHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhccccccc
Confidence 9999999988664 4578999999999999999999999999999999999999 67788999999999765433221
Q ss_pred ee--eeeccC---------CC----CcchhHHHHHHHhcccccCC
Q 040003 289 RV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 289 ~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
.. ..+..| ++ +-++.+.++.+++.|..+|.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 218 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11 111111 11 12344778888888877664
No 333
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.93 E-value=6.9e-25 Score=210.94 Aligned_cols=151 Identities=26% Similarity=0.401 Sum_probs=126.6
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
|++.+.||+|+||.||+|.+. .+++.||||++.... ......+.+.+|+++++.+ +||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence 567889999999999999864 357899999986543 3445567889999999999 7999999999886532
Q ss_pred --eEEEEEeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 203 --AVHVVMELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
..++++||+.+|+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEEC
Confidence 347899999999998877532 146888899999999999999999999999999999999 667889999
Q ss_pred eeccccccCCC
Q 040003 275 DFGLSMFFRPG 285 (489)
Q Consensus 275 DFGla~~~~~~ 285 (489)
|||+++....+
T Consensus 156 dfg~~~~~~~~ 166 (273)
T cd05074 156 DFGLSKKIYSG 166 (273)
T ss_pred cccccccccCC
Confidence 99999876543
No 334
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.93 E-value=1.2e-24 Score=208.81 Aligned_cols=182 Identities=20% Similarity=0.295 Sum_probs=141.3
Q ss_pred cceeeccee--ccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKL--GQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~l--G~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.|++.+.+ |+|+||.||+++++.+++.+|+|.+....... .|+.+...+.+||||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 346666665 99999999999999999999999987543211 13333333337999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
+||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +..+ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY---DRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---eCCCCeEEEecCccceecCC
Confidence 999999999999999887789999999999999999999999999999999999999 4445 799999999986643
Q ss_pred CCceee--------ee-eccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 285 GLTFRV--------WL-RLHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~~~~--------~~-~~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... ++ ...| .-+-++.+.++.+++.|..+|...
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 209 (267)
T PHA03390 163 PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209 (267)
T ss_pred CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 322111 11 1111 112234577888899998877643
No 335
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=8.6e-25 Score=214.88 Aligned_cols=189 Identities=24% Similarity=0.316 Sum_probs=146.0
Q ss_pred eeecceeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 205 (489)
|++.++||+|+||.||+|.+.. +++.||+|.+...........+.+.+|+.+++.+ +||||+++++++.+. ..+|
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceEE
Confidence 8889999999999999999988 8999999999764322233346678899999999 899999999999988 8899
Q ss_pred EEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee-CCCCCCeEEEeeccc
Q 040003 206 VVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN-QQEEAPLKTIDFGLS 279 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~-~~~~~~~kl~DFGla 279 (489)
+||||+++ +|.+.+... ..+++..+..++.|++.||.|||+++|+||||||+|||+.. .+..+.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 676666432 26889999999999999999999999999999999999932 112788999999999
Q ss_pred cccCCCCcee-----eeeeccC----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFR-----VWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~-----~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..+....... ...+..| . .+-++.+.++.+++.|...|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 8764322200 0111111 1 12234477888888888777643
No 336
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=2e-24 Score=205.24 Aligned_cols=232 Identities=27% Similarity=0.320 Sum_probs=172.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 207 (489)
|.+.+.||+|++|.||+|.+..+++.|++|++...... ....+.+.+|+.+++++ +||||+++++.+.+. ..+++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEE
Confidence 78889999999999999999999999999998654322 45667899999999999 799999999999988 899999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+++|.+++.....+++..+..++.+++.+|.|||+.|++|+||+|+||++ +.++.+||+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEecccccc
Confidence 9999999999999887789999999999999999999999999999999999999 6678899999999988765542
Q ss_pred e----eeeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCC--CCCC-CcchhhhhhccHHHHHH
Q 040003 288 F----RVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPP-IGDRVIAESLSEEEIAG 347 (489)
Q Consensus 288 ~----~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ 347 (489)
. .......| ..+-.+.+.++.+++.|..++......... .+.. .....+...++.+..+.
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDF 236 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHH
Confidence 1 11111111 112234477888888888877654310000 0000 00011122223322222
Q ss_pred HHHHHhhhcCCCCCCccHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+. +++..|++.|.+..|+.
T Consensus 237 i~---~~l~~~p~~Rp~~~~ll 255 (260)
T cd06606 237 LR---KCLRRDPKKRPTADELL 255 (260)
T ss_pred HH---HhCcCChhhCCCHHHHh
Confidence 22 45667777888877764
No 337
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.93 E-value=9.5e-25 Score=206.96 Aligned_cols=146 Identities=34% Similarity=0.593 Sum_probs=133.5
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||.||++.+..+++.+|+|++.+...........+.+|+.+++.+ +||||+++++.+......|+||||+.+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 69999999999999988999999999876555555677889999999999 79999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.+++...+.+++..+..++.|++.|+.|||+.+++|+||||+||++ +.++.++|+|||++......
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccC
Confidence 99999887789999999999999999999999999999999999999 66778999999999876543
No 338
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-25 Score=234.46 Aligned_cols=157 Identities=25% Similarity=0.410 Sum_probs=136.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc-----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK-----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..-++.+.||+|+||.||.|....-.. .||+|.+++ ..+.++...|.+|..+|+.+ +|||||+++|++.+..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--LSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--cCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCC
Confidence 346678899999999999998764322 388888754 46678889999999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 AVHVVMELCAGGELFDRIIQR-------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..+|++|||+||+|..+|.+. ..+...+...++.+|+.|++||+++++|||||-..|+|| +....+||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEcc
Confidence 999999999999999999875 247889999999999999999999999999999999999 7779999999
Q ss_pred eccccccCCCCceee
Q 040003 276 FGLSMFFRPGLTFRV 290 (489)
Q Consensus 276 FGla~~~~~~~~~~~ 290 (489)
||+|+.+...+.++.
T Consensus 846 FGlArDiy~~~yyr~ 860 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRK 860 (1025)
T ss_pred cchhHhhhhchheec
Confidence 999996655554443
No 339
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.93 E-value=1.9e-24 Score=208.78 Aligned_cols=184 Identities=25% Similarity=0.352 Sum_probs=144.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 207 (489)
|++.++||+|+||.||+|.+..+++.||+|.+.+... .... ....+|+.++.++.+|+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6778899999999999999999999999999865422 2222 23457999999996699999999999987 899999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+. ++|.+.+... +.+++..+..++.|++.||+|||+.||+||||||+||++ +. +.+||+|||+++......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l---~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI---KD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---cC-CCeEEEecccccccccCC
Confidence 99996 5888887653 568999999999999999999999999999999999999 55 889999999998764332
Q ss_pred ceee------------eeeccC---CCCcchhHHHHHHHhcccccCCCC
Q 040003 287 TFRV------------WLRLHF---LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~~~~------------~~~~~y---pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... +....+ .-+-++.+.++.+++.|...|+..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~ 202 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT 202 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence 2211 111111 111234477888888887777653
No 340
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=8e-25 Score=208.38 Aligned_cols=185 Identities=21% Similarity=0.375 Sum_probs=147.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|.++.++..+|+|.+...... ....+.+.+|+++++.+ +|+||+++++++......|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence 388899999999999999999999999999998764332 23446788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGla~~~~~~ 285 (489)
||+.+++|.+++.... .+++..+..++.+++.||.|||+.+|+|+||||+||++ +.+ ..+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL---SKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---cCCCCeEEecccccchhccCC
Confidence 9999999999887643 47899999999999999999999999999999999999 444 35799999999876543
Q ss_pred Cceeeeeecc--C---------CC----CcchhHHHHHHHhcccccCC
Q 040003 286 LTFRVWLRLH--F---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~~~~~~--y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
........+. | ++ +-.+.+.++.+++.|..++.
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 203 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3221111111 1 11 11234667777877776664
No 341
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.2e-27 Score=213.18 Aligned_cols=182 Identities=21% Similarity=0.316 Sum_probs=148.8
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----eEEE
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-----AVHV 206 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~~l 206 (489)
-.+.||-|+||+||.+++..+|+.||+|++..- ...-...+++.+|+.+|..+ +|.||...+++..-.. .+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHHH
Confidence 346799999999999999999999999987532 22334456788999999999 7999999988765432 4788
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
+.|+|. .+|...+.....++...+..++.||+.||+|||+.||+||||||.|+|+ +.+..+||||||+|+......
T Consensus 135 ~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhh
Confidence 999995 5888888888889999999999999999999999999999999999999 778999999999999887654
Q ss_pred ceee---------------eeeccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV---------------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~---------------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
...- +..++| -.+-++-++||.+++.+++-|-.
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 4322 444555 34445668999999888777753
No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.93 E-value=7.8e-25 Score=212.45 Aligned_cols=187 Identities=26% Similarity=0.378 Sum_probs=149.1
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|++++.++.+||||+++++++......|
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 788999999999999999864 46788999998754322 22334567899999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+.+|+|.+++...+.+++..+..++.|++.+|.|||+.|++||||||.||++ +.++.+||+|||+++.+...
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECccccccccc
Confidence 999999999999999877789999999999999999999999999999999999999 66788999999999876543
Q ss_pred Cceee---eeeccC---------------CCCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV---WLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~---~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... .....| .-+-.+.+.++.+++.|..++..
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 32111 011111 11122446777788888777653
No 343
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.93 E-value=1.6e-25 Score=202.47 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=111.6
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHH-----------------------HHHHHHHHHHHHHhcCCC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED-----------------------VEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~-----------------------~~~~~~E~~~l~~l~~hp 189 (489)
...||+|+||.||+|.+. +|+.||+|+++......... .....+|+++|.+| .++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHC
Confidence 457999999999999987 89999999997643211110 12334599999999 577
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEeeeeCCCC
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-HSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l-H~~~iiHrDlKp~Nill~~~~~~ 268 (489)
++.....+... ..+|||||++|+++.......+.++...+..++.|++.+|.++ |+.||+||||||+|||+. +
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~ 153 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----D 153 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----C
Confidence 76433332222 2389999999887766545567899999999999999999999 799999999999999993 3
Q ss_pred CCeEEEeeccccccCC
Q 040003 269 APLKTIDFGLSMFFRP 284 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~ 284 (489)
+.++|+|||+|.....
T Consensus 154 ~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 154 GKLYIIDVSQSVEHDH 169 (190)
T ss_pred CcEEEEEccccccCCC
Confidence 5799999999986543
No 344
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=1.5e-24 Score=209.87 Aligned_cols=185 Identities=22% Similarity=0.296 Sum_probs=147.9
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 207 (489)
|++.+.||+|+||.||+|.+..+++.+|+|.+.... ........+.+|+++++.+ +|+||+++++++.+. ...|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEE
Confidence 678889999999999999999999999999997653 2333446788999999999 799999999999888 899999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+ +|..++... ..+++..+..++.||+.||.|||+.|++|+||||+|||+ +.++.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence 999975 888887665 578999999999999999999999999999999999999 678889999999998775432
Q ss_pred c--eee-----------eeeccCC----CCcchhHHHHHHHhcccccCCCC
Q 040003 287 T--FRV-----------WLRLHFL----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~--~~~-----------~~~~~yp----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. ... ++.+... -+-.+.+.++.+++.|...|...
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~ 205 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGS 205 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 100 1111111 11223467777888887776543
No 345
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.93 E-value=1e-24 Score=213.68 Aligned_cols=151 Identities=26% Similarity=0.418 Sum_probs=128.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
.+.|++.++||+|+||.||+|.+..+++.||||.+...... ......+.+|+++++++ +||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhC-CCCCccceEEEEeccccccc
Confidence 34599999999999999999999999999999998653321 22224566899999999 8999999999886543
Q ss_pred ----eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 203 ----AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 203 ----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
..|+||||+.+ +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg 164 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFG 164 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCC
Confidence 45999999964 787777654 368999999999999999999999999999999999999 677889999999
Q ss_pred cccccC
Q 040003 278 LSMFFR 283 (489)
Q Consensus 278 la~~~~ 283 (489)
++..+.
T Consensus 165 ~~~~~~ 170 (310)
T cd07865 165 LARAFS 170 (310)
T ss_pred Cccccc
Confidence 998764
No 346
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93 E-value=3.5e-24 Score=203.96 Aligned_cols=146 Identities=27% Similarity=0.445 Sum_probs=128.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+. .+..+|+|.+...... ...+.+|+++++.+ +||||+++++++......|+||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEE
Confidence 4888999999999999999875 4678999988654322 24678899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||+.+++|.+++... +.+++..+..++.+++.++.|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVL 151 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecc
Confidence 999999999988654 568899999999999999999999999999999999999 667789999999998654
No 347
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.93 E-value=5.3e-25 Score=211.22 Aligned_cols=233 Identities=21% Similarity=0.251 Sum_probs=159.2
Q ss_pred eeccCCceEEEEEEEcCCC------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 135 KLGQGQFGTTFLCVEKATQ------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.||+|+||.||+|.+.... +.+|+|.+.... .......+.+|+.+++.+ +||||+++++++......|+||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEE
Confidence 5899999999999876543 689999886432 234456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--CCCCeEEEeeccc
Q 040003 209 ELCAGGELFDRIIQR-------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ--EEAPLKTIDFGLS 279 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~--~~~~~kl~DFGla 279 (489)
||+.+++|.+++... ..++...+..++.|++.||.|||+.+|+|+||||+|||+...+ ....+||+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999998642 2367788899999999999999999999999999999995432 2237999999999
Q ss_pred cccCCCCceee----eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhc
Q 040003 280 MFFRPGLTFRV----WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESL 340 (489)
Q Consensus 280 ~~~~~~~~~~~----~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (489)
+.......... ..+..| .-+-++.+.++.+++. |..+|+...-.... .+............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENC 238 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccc
Confidence 86643322111 001111 1122344777888775 77666532110000 00000000011122
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
+. .+.. -+.+++..+++.|++++++...|.
T Consensus 239 ~~-~~~~--li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 239 PD-KIYQ--LMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred hH-HHHH--HHHHHcCCCcccCCCHHHHHHHHh
Confidence 22 2211 123567778888888888877664
No 348
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.93 E-value=9.1e-25 Score=216.87 Aligned_cols=186 Identities=25% Similarity=0.332 Sum_probs=145.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|.+... ........+.+|+.+++.+ +||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccc
Confidence 345799999999999999999999999999999998542 2233456678899999999 799999999887543
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
...|+||||+.+ +|..++ ..+.+++..+..++.|++.||.|||++||+||||||+|||+ +..+.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~-~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLI-KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhccc-CHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence 358999999964 887766 44579999999999999999999999999999999999999 677889999999998
Q ss_pred ccCCCCceee-----eeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 281 FFRPGLTFRV-----WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 281 ~~~~~~~~~~-----~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.......... +.+..| .+ +-++.+.++.+++.|...|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7643221110 111111 11 122447788888888877754
No 349
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93 E-value=8.2e-25 Score=210.05 Aligned_cols=141 Identities=21% Similarity=0.326 Sum_probs=118.4
Q ss_pred eeccCCceEEEEEEEcCC--CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||+|..... ...+++|.+... ......+.+.+|+.+++.+ +||||+++++++.+....|+|||||.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN--ASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC--CChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence 599999999999975433 234566665432 2234567889999999999 89999999999999999999999999
Q ss_pred CCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 213 GGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 213 ~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|+|.+++... ...+...+..++.||+.||.|||+.+|+||||||+|||+ +.++.+||+|||++..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPS 148 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccc
Confidence 99999998753 235667778899999999999999999999999999999 6678899999999864
No 350
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=2.5e-24 Score=204.70 Aligned_cols=153 Identities=28% Similarity=0.540 Sum_probs=137.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||.|+||.||++.+..+++.||+|++..... .......+.+|+++++.+ +|||++++++.+......++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEE
Confidence 38889999999999999999999999999999875432 335567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++... ..+++..+..++.+++.||.|||++|++|+||+|+||++ +.++.+||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeeccc
Confidence 999999999998764 678999999999999999999999999999999999999 6678899999999987755
Q ss_pred CC
Q 040003 285 GL 286 (489)
Q Consensus 285 ~~ 286 (489)
..
T Consensus 156 ~~ 157 (258)
T cd08215 156 TV 157 (258)
T ss_pred Cc
Confidence 43
No 351
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.93 E-value=1.9e-25 Score=213.14 Aligned_cols=148 Identities=19% Similarity=0.241 Sum_probs=123.1
Q ss_pred ceeccCCceEEEEEEEcCCCc-------EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 134 RKLGQGQFGTTFLCVEKATQK-------EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~-------~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.||+|+||.||+|.+..++. .+|+|.+... .....+.+..|+.+++.+ +||||+++++++......++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence 369999999999998866543 3788877432 233456788899999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-----CCCeEEEeecccc
Q 040003 207 VMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-----EAPLKTIDFGLSM 280 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-----~~~~kl~DFGla~ 280 (489)
|||||.+|+|..++...+ .+++..+..++.||+.||.|||++||+||||||+|||+..++. ...+|++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999987654 5889999999999999999999999999999999999954321 1237999999997
Q ss_pred ccCCC
Q 040003 281 FFRPG 285 (489)
Q Consensus 281 ~~~~~ 285 (489)
.....
T Consensus 157 ~~~~~ 161 (258)
T cd05078 157 TVLPK 161 (258)
T ss_pred ccCCc
Confidence 66543
No 352
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.93 E-value=3.7e-24 Score=207.48 Aligned_cols=183 Identities=22% Similarity=0.306 Sum_probs=146.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|...+.||+|++|.||++.+..+++.+|+|.+... .....+.+.+|+.+++.+ +||||+++++++...+..|+|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEE
Confidence 355567899999999999999999999999988543 233446688999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|.+++.. +.++...+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.........
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCcc
Confidence 99999999998876 678999999999999999999999999999999999999 66788999999998765432211
Q ss_pred ee--eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 289 RV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. +.+..| ++ +-.+.+.++.+++.|...|..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~ 217 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN 217 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC
Confidence 10 111111 11 123447788888888776643
No 353
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.93 E-value=1.8e-24 Score=208.49 Aligned_cols=144 Identities=14% Similarity=0.147 Sum_probs=119.8
Q ss_pred eeccCCceEEEEEEEcCC------------------------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC
Q 040003 135 KLGQGQFGTTFLCVEKAT------------------------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~------------------------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn 190 (489)
.||+|+||.||+|....+ ...||+|++... .......+.+|+.+++.+ +|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQV-SHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcC-CCCC
Confidence 699999999999975322 235888887542 223345688899999999 7999
Q ss_pred eeEEEEEEEeCCeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC----
Q 040003 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ---- 265 (489)
Q Consensus 191 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~---- 265 (489)
|+++++++.+....|+|||||++|+|..++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+...
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888865 4678999999999999999999999999999999999999532
Q ss_pred CCCCCeEEEeecccccc
Q 040003 266 QEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~ 282 (489)
.....+||+|||++...
T Consensus 158 ~~~~~~kl~d~g~~~~~ 174 (274)
T cd05076 158 GTSPFIKLSDPGVSFTA 174 (274)
T ss_pred CccceeeecCCcccccc
Confidence 12335899999998654
No 354
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.93 E-value=1.7e-24 Score=207.78 Aligned_cols=237 Identities=18% Similarity=0.264 Sum_probs=166.9
Q ss_pred eeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccC-------CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKL-------TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++.+.
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 7888999999999999999887 788999998864321 23345567788999888644899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 202 VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
+..|+||||++|++|.+++.. ...+++..++.++.|++.+|.|||+ .||+||||||+|||+ +.++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEecc
Confidence 999999999999999888743 3468999999999999999999996 789999999999999 66788999999
Q ss_pred ccccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchhhhhhc
Q 040003 277 GLSMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 340 (489)
|++........... ..+..| ++. -.+.+.++.+++.|..+|......... .+ ............
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMY 238 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccC
Confidence 99987654432111 111111 111 123466778888887766432211000 00 000000000112
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+.+-.+.++ +++..|+++|.+..|+..++
T Consensus 239 ~~~l~~li~---~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 239 SEDVTDVIT---SCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred CHHHHHHHH---HHCCCCCccCCCHHHHHHHh
Confidence 222222222 56778888999998887765
No 355
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93 E-value=3.8e-24 Score=209.80 Aligned_cols=187 Identities=24% Similarity=0.320 Sum_probs=148.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
...|...+.||+|+||.||+|++..++..+|+|.+.............+.+|+++++.+ +|+|++++++++......|+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEE
Confidence 44588889999999999999999999999999998754444455567788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||+. |+|.+.+.. ...+++..+..++.+++.+|.|||+++|+||||||+|||+ +.++.+||+|||++......
T Consensus 93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecCc
Confidence 999996 578777654 3468999999999999999999999999999999999999 66788999999999876543
Q ss_pred Cceee--------ee----eccC--CCCcchhHHHHHHHhcccccCC
Q 040003 286 LTFRV--------WL----RLHF--LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~--------~~----~~~y--pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
..... ++ ...+ .-+-++.+.++.+++.|..++.
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 215 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCc
Confidence 22211 00 0111 1122344677777877776653
No 356
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.92 E-value=1.9e-24 Score=205.61 Aligned_cols=184 Identities=23% Similarity=0.336 Sum_probs=148.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.++||+|+||.||++.+..+++.+|+|.+...... ......+.+|+++++.+ +|+||+++++++.+....|+|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEeh
Confidence 88899999999999999999999999999998764432 34556788999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 210 LCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 210 ~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|+++++|.+++.. ...+++..+..++.+++.||.|||+.|++||||||+||++ +.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~---~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL---VANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---ecCCcEEEeeccchhhhccC
Confidence 9999999998865 3468889999999999999999999999999999999999 55778999999999877554
Q ss_pred CceeeeeeccC---------CCC----cchhHHHHHHHhcccccCC
Q 040003 286 LTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~ 318 (489)
..........| ++. -++.+.++.+++.|..+|.
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 202 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 22111111111 111 1234667777777776654
No 357
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.92 E-value=6.2e-24 Score=210.11 Aligned_cols=188 Identities=26% Similarity=0.339 Sum_probs=147.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCeE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AVAV 204 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~ 204 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.. ......+.+.+|+++++.+ +||||++++++|.. ....
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDI 85 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcE
Confidence 3466999999999999999999999999999999886532 2233446778999999999 79999999999865 5678
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+ +++|..++. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +..+.+||+|||++.....
T Consensus 86 ~lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 86 YFVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCC
Confidence 9999999 568877664 4568888899999999999999999999999999999999 6678899999999986543
Q ss_pred CCceee---------eeec--cCCCC--cchhHHHHHHHhcccccCCCC
Q 040003 285 GLTFRV---------WLRL--HFLFF--QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~~~~---------~~~~--~ypf~--~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... .+.. .|.+. -.+.+.++.+++.|...|+..
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 221100 1111 11111 123477888888888877643
No 358
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92 E-value=9.4e-25 Score=212.38 Aligned_cols=237 Identities=21% Similarity=0.213 Sum_probs=167.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|....+||+|+||.||++....+++.||+|.+... .......+.+|+.+++.+ +|+||+++++++...+..|+||
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEE
Confidence 355557899999999999999999999999988532 234456788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+++++|.+++. .+.+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.++|+|||++.........
T Consensus 97 e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~~ 172 (292)
T cd06657 97 EFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPR 172 (292)
T ss_pred ecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceeccccccc
Confidence 9999999988764 4578999999999999999999999999999999999999 66788999999998766433211
Q ss_pred eeee--eccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchh--hhhhccHHHHHHHHH
Q 040003 289 RVWL--RLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRV--IAESLSEEEIAGLKE 350 (489)
Q Consensus 289 ~~~~--~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~~ 350 (489)
.... +..| . .+-++.+.++.+++.|..+|......... .+....... .....+.+....
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 249 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGF--- 249 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHH---
Confidence 1111 1111 1 12234467788888887766533211000 000000000 001122222222
Q ss_pred HHhhhcCCCCCCccHHHHHH--HHHHhC
Q 040003 351 MFKMIDTDNSGYITLEELKK--GLQRVG 376 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~--~l~~lg 376 (489)
+-++++.+++.+++..++.. ++...+
T Consensus 250 i~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 250 LDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 23567788888998888764 444444
No 359
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.92 E-value=2.6e-24 Score=205.63 Aligned_cols=144 Identities=27% Similarity=0.355 Sum_probs=121.3
Q ss_pred ceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-eCCeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-DAVAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~~~~~lv~e 209 (489)
+.||+|+||.||+|.+.. ....||+|.+... ......+.+.+|+.+++.+ +||||+++++++. .+...++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998653 3457999987532 2345567888999999999 8999999999765 4566899999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+.+|+|.+++... .......+..++.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIY 149 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCcccccccc
Confidence 99999999998754 346777788899999999999999999999999999999 667889999999998654
No 360
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92 E-value=1.8e-24 Score=209.24 Aligned_cols=184 Identities=24% Similarity=0.327 Sum_probs=146.5
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||.|++|.||+|.+..+|..||+|++..... .......+.+|+++++.+ +||||+++++++.+....|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence 5678899999999999999999999999999875432 222335678899999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+. ++|.+++.... .+++..+..++.|++.||.|||+++++||||+|+||++ +.++.+||+|||++..+.....
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCcc
Confidence 995 68999887665 68999999999999999999999999999999999999 5678899999999976532211
Q ss_pred e-e-e----------eeeccCCCC----cchhHHHHHHHhcccccCCC
Q 040003 288 F-R-V----------WLRLHFLFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~-~-~----------~~~~~ypf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
. . . ++.+.-++. ..+.+.++.+++.|...|..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0 0 0 111111111 12347788888888877653
No 361
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.5e-25 Score=219.71 Aligned_cols=231 Identities=27% Similarity=0.365 Sum_probs=176.9
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+..+.+.|.+...+|.|+|+.|-.|.+..+++.+++|++.+... ...+|+.++....+||||+++.+.+.+..
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~ 389 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGK 389 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCc
Confidence 34466779999999999999999999999999999999976521 23467878877779999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+.|+|||++.|+.|.+.+.....+. ..+..|+++|+.|+.|||++|||||||||+|||+. +..++++|+|||.++..
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhC
Confidence 9999999999999999887765555 78888999999999999999999999999999995 35778999999999988
Q ss_pred CCCCceeeeeecc-----------C----CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHH
Q 040003 283 RPGLTFRVWLRLH-----------F----LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 283 ~~~~~~~~~~~~~-----------y----pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (489)
... ..+.-++.. | .+| +.+.++++++.|.-.|-...-. ......+........++.+-.+-
T Consensus 467 ~~~-~~tp~~t~~y~APEvl~~~~yt~acD~W--SLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~~~~~s~~vS~~AKdL 542 (612)
T KOG0603|consen 467 ERS-CDTPALTLQYVAPEVLAIQEYTEACDWW--SLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQMPKFSECVSDEAKDL 542 (612)
T ss_pred chh-hcccchhhcccChhhhccCCCCcchhhH--HHHHHHHHHHhCCCccccCCch-HHHHHhhcCCccccccCHHHHHH
Confidence 765 111112222 2 444 4488999999998888654321 01111111121224556655555
Q ss_pred HHHHHhhhcCCCCCCccHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+. .++..|+..|+++.++..
T Consensus 543 l~---~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 543 LQ---QLLQVDPALRLGADEIGA 562 (612)
T ss_pred HH---HhccCChhhCcChhhhcc
Confidence 55 457788888999998753
No 362
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.92 E-value=4.1e-24 Score=202.26 Aligned_cols=182 Identities=27% Similarity=0.370 Sum_probs=151.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||++.+..+++.+++|++..... .....+.+|+++++.+ +|+||+++++++......+++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEe
Confidence 7888999999999999999998999999999865432 3567889999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT- 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~- 287 (489)
|+.+++|.+++... ..+++..+..++.|++.+|.+||.+|++||||+|+||++ +.++.+||+|||++........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~ 154 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKAR 154 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeeccccccccccccc
Confidence 99999999988765 578999999999999999999999999999999999999 6678899999999988866541
Q ss_pred eeeeeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 288 FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 288 ~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
........| ..+-.+.+.++..++.|..++.
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 198 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYS 198 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 111111111 1222345777888888876654
No 363
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92 E-value=1.6e-24 Score=211.60 Aligned_cols=186 Identities=20% Similarity=0.346 Sum_probs=145.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV----- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 202 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++.+ +||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhc
Confidence 569999999999999999999999999999999875432 122335677899999999 8999999999987654
Q ss_pred -----eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 -----AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 -----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+|+||||+.+ +|...+... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~df 160 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLADF 160 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeCcc
Confidence 89999999976 676766543 468999999999999999999999999999999999999 67788999999
Q ss_pred ccccccCCCCc--ee-eeeeccC--------------CCCcchhHHHHHHHhcccccCCC
Q 040003 277 GLSMFFRPGLT--FR-VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 277 Gla~~~~~~~~--~~-~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|++..+..... +. ......| .-+-.+.+.++.+++.|...|..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 99987643321 00 0111111 11123446778888888776653
No 364
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.92 E-value=9.4e-24 Score=207.47 Aligned_cols=188 Identities=23% Similarity=0.318 Sum_probs=148.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|...++||+|+||+||+|.+..+++.||+|.+.............+.+|+++++.+ +|||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 345577788999999999999999999999999999765444555567788999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+. |+|.+.+.. ...+++..+..++.|++.+|.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 98 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP 173 (313)
T ss_pred EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC
Confidence 9999996 577777755 3568999999999999999999999999999999999999 6677899999999875433
Q ss_pred CCceee--------ee----eccCC--CCcchhHHHHHHHhcccccCC
Q 040003 285 GLTFRV--------WL----RLHFL--FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 285 ~~~~~~--------~~----~~~yp--f~~~~~~~~~~~i~~~~~~~~ 318 (489)
...... ++ ...+. -+-++.+.++.+++.|..++.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~ 221 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 221 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 221110 11 01110 011244677888888877654
No 365
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.92 E-value=2.7e-24 Score=212.91 Aligned_cols=186 Identities=27% Similarity=0.367 Sum_probs=150.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----e
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-----A 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~ 203 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+.+|+.+++.+ +|+||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence 3889999999999999999999999999999986532 2234556788999999999 7999999999988775 7
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+||||+. ++|.+++.....+++..+..++.+++.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeec
Confidence 999999997 5898888777789999999999999999999999999999999999999 667899999999999876
Q ss_pred CCCc----ee-eeeeccC----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLT----FR-VWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~----~~-~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... .. .+.+..| + -+-++.+.++.+++.|...|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 5431 11 1111111 1 11234467778888887777654
No 366
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.92 E-value=4.1e-24 Score=212.27 Aligned_cols=188 Identities=22% Similarity=0.326 Sum_probs=148.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCe
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVA 203 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~ 203 (489)
+.+.|++.+.||+|+||.||+|.+..+++.+|+|.+.+.. ........+.+|+.+++++.+||||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 4567999999999999999999999899999999886432 2233445677899999999679999999999864 346
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+. ++|..++... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++.+.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhccc
Confidence 899999997 5898877654 78888999999999999999999999999999999999 778899999999998765
Q ss_pred CCCce-------eeeeeccC--------------CCCcchhHHHHHHHhcccccCCC
Q 040003 284 PGLTF-------RVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 284 ~~~~~-------~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... ..+.+..| .-+-++.+.++.+++.|...|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCC
Confidence 43221 00111111 11123447788889988877754
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.92 E-value=2.1e-24 Score=208.68 Aligned_cols=185 Identities=25% Similarity=0.379 Sum_probs=147.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||+||+|....+++.||||.+...... .......+|+..++++.+|+||+++++++.+....|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67888999999999999999989999999998654321 2223445799999999449999999999999999999999
Q ss_pred ecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+ +|+|.+++.... .+++..+..++.|++.+|.|||++||+|+||||+||++ +..+.++|+|||++........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence 99 789999887654 78999999999999999999999999999999999999 6788899999999987654322
Q ss_pred eee-----------eeecc--C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FRV-----------WLRLH--F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~-----------~~~~~--y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ++... + .-+-.+.+.++.+++.|...|+..
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 211 11111 1 112234577888888888777654
No 368
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.92 E-value=1.1e-23 Score=203.86 Aligned_cols=185 Identities=22% Similarity=0.330 Sum_probs=143.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCe----
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVA---- 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~---- 203 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++++. +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788899999999999999998899999999975432 2223345678888888773 59999999999988776
Q ss_pred -EEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 204 -VHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 204 -~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+++|||+.+ +|.+++.... .+++..+..++.|++.||.|||+.||+|+||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcce
Confidence 9999999964 8888886643 58999999999999999999999999999999999999 667889999999998
Q ss_pred ccCCCCceee-eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 281 FFRPGLTFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+........ .....| .-+.++.+.++.+++.|...|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccC
Confidence 7643322111 001111 11223447777788777665543
No 369
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.92 E-value=5.1e-24 Score=210.76 Aligned_cols=142 Identities=15% Similarity=0.247 Sum_probs=124.9
Q ss_pred ceeccC--CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQG--QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G--~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
..||+| +||+||+|.+..+++.||+|++..... .....+.+.+|+.+++.+ +||||++++++|......|+||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence 356666 999999999999999999999875432 344567889999999999 8999999999999999999999999
Q ss_pred CCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 212 AGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 212 ~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+|++|||.+.
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~ 149 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLY 149 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHh
Confidence 999999988764 348899999999999999999999999999999999999 567789999998654
No 370
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.92 E-value=4.9e-24 Score=212.41 Aligned_cols=186 Identities=24% Similarity=0.345 Sum_probs=145.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|.+.+.||+|+||.||+|.+..+++.||+|++.+.. ......+.+.+|+.+++++ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccc
Confidence 4467999999999999999999999999999999986532 2233446678899999999 899999999988643
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|++++++ +++|.+++. .+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~~ 167 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA 167 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEeccccc
Confidence 3578899987 778887664 3468999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceeeeeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+......... ..+..| ++ +-++.+.++.+++.|...|+.
T Consensus 168 ~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 168 RHTDDEMTGY-VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cccccccccc-ccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8654322110 111111 11 112347788888888877754
No 371
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92 E-value=9.3e-24 Score=204.66 Aligned_cols=151 Identities=33% Similarity=0.481 Sum_probs=136.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|++...||+|+||.||+|.+..++..||+|++..... ..+.+.+|+++++.+ +|+||+++++++......|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEE
Confidence 44569999999999999999999998999999999865322 456788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+++|.+++.... .++...+..++.+++.||.|||+.||+|+||||+||++ +.++.+||+|||++.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhcc
Confidence 9999999999999998776 89999999999999999999999999999999999999 6678899999999876543
No 372
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.92 E-value=2.1e-24 Score=187.82 Aligned_cols=141 Identities=40% Similarity=0.722 Sum_probs=130.2
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh-h---
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI-Q--- 415 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~-~--- 415 (489)
++.++...++++|+.+|.|++|+|+..||..+|+.+|..+++.++..++..+|.|++|.|+|+||+.++...... .
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 456788899999999999999999999999999999999999999999999999999999999999988754321 1
Q ss_pred -hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 -REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 -~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.+++||+.||+|++|+|+.+||+.+|..+| ++++++++|++.+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 345899999999999999999999999999999 68999999999999999999999999999974
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.92 E-value=4.8e-24 Score=211.35 Aligned_cols=150 Identities=27% Similarity=0.379 Sum_probs=129.2
Q ss_pred eeecceeccCCceEEEEEEEcCC--CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVA 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~ 203 (489)
|++.+.||+|+||.||+|++..+ +..||+|.+.... ......+.+.+|+.+++++.+||||+++++++.. ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 88899999999999999999888 8999999986432 2223356778899999999679999999987533 246
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|++|||+. ++|.+.+.....+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceecc
Confidence 889999985 6899988877889999999999999999999999999999999999999 667889999999998765
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 157 ~ 157 (332)
T cd07857 157 E 157 (332)
T ss_pred c
Confidence 3
No 374
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.92 E-value=4.7e-24 Score=206.89 Aligned_cols=185 Identities=18% Similarity=0.199 Sum_probs=143.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|...+.||+|+||.||++.+..+++.||+|.+..... ......+.+|+.++.++.+|+||+++++++......|++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 46677899999999999999999999999999875432 2455678899999999955999999999999999999999
Q ss_pred eecCCCchHHH---HH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDR---II--QRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~---l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||+.. +|.++ +. ..+.+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHHh
Confidence 99864 54443 22 235789999999999999999999974 99999999999999 66788999999999866
Q ss_pred CCCCceee-----------eeec----cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 283 RPGLTFRV-----------WLRL----HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 283 ~~~~~~~~-----------~~~~----~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
........ ++.. .| .-+-++.+.++.+++.|..+|..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 212 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK 212 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence 43221110 1111 11 01123447788888888887753
No 375
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.92 E-value=8.5e-24 Score=202.33 Aligned_cols=146 Identities=13% Similarity=0.153 Sum_probs=120.1
Q ss_pred ceeccCCceEEEEEEEcCC------------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 134 RKLGQGQFGTTFLCVEKAT------------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~------------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
+.||+|+||.||+|..... ...+|+|.+... .......+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQV-SHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 3689999999999975322 235888876542 233445788899999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC----CCCCeEEEee
Q 040003 202 VAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ----EEAPLKTIDF 276 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~----~~~~~kl~DF 276 (489)
...++||||+.+|+|..++... +.+++..+..++.||+.||.|||++||+||||||+|||+.... ....+|++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999998887653 5689999999999999999999999999999999999995321 1123899999
Q ss_pred ccccccC
Q 040003 277 GLSMFFR 283 (489)
Q Consensus 277 Gla~~~~ 283 (489)
|++..+.
T Consensus 157 g~~~~~~ 163 (262)
T cd05077 157 GIPITVL 163 (262)
T ss_pred CCCcccc
Confidence 9997654
No 376
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.92 E-value=4.5e-24 Score=206.11 Aligned_cols=186 Identities=26% Similarity=0.390 Sum_probs=149.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|....+++.||+|++.... ......+.+.+|+.+++.+ +|+||+++++++.+....++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEec
Confidence 567788999999999999999999999999987643 2233346677899999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
|+. ++|.+++... ..+++..+..++.+++.||.|||++||+||||+|+||++ +.++.+||+|||++.........
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccc
Confidence 997 5899998776 579999999999999999999999999999999999999 66788999999999876443211
Q ss_pred e-e-----------ee-ec-cC--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 289 R-V-----------WL-RL-HF--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 289 ~-~-----------~~-~~-~y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
. . ++ .. .+ .-+-.+.+.++.+++.|...|....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 203 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS 203 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 0 0 11 01 11 1122344677888888877776543
No 377
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.92 E-value=4.1e-24 Score=212.77 Aligned_cols=189 Identities=25% Similarity=0.380 Sum_probs=149.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe-
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA- 203 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~- 203 (489)
.+.+.|++.+.||+|+||.||+|++..+++.||+|++.... ........+.+|+.+++.+ +||||+++++++.....
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSL 89 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccc
Confidence 44567999999999999999999999999999999986532 2233456778899999999 89999999988866554
Q ss_pred -----EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 204 -----VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 204 -----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.|+|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEccccc
Confidence 89999998 6799887754 579999999999999999999999999999999999999 6678899999999
Q ss_pred ccccCCCCceee---------eeec--cC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 279 SMFFRPGLTFRV---------WLRL--HF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 279 a~~~~~~~~~~~---------~~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+........... ++.. .+ ..+-++.+.++.+++.|...|+..
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 165 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred cccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 987643311100 1111 11 112234477888888888877654
No 378
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.92 E-value=4.7e-24 Score=193.63 Aligned_cols=145 Identities=17% Similarity=0.142 Sum_probs=114.4
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC---------------------H--HHHHHHHHHHHHHHHhcCCC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT---------------------E--EDVEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~---------------------~--~~~~~~~~E~~~l~~l~~hp 189 (489)
.+.||+|+||.||+|.+. +|+.||||+++...... . .....+.+|++.+.++ .|+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhC
Confidence 467999999999999987 89999999987642110 0 0022346899999999 788
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCC
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~ 268 (489)
+|.....+... ..||||||++|+++.........++...+..++.|++.++.++|+ .||+||||||+|||+ + +
T Consensus 80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll---~-~ 153 (190)
T cd05145 80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY---H-D 153 (190)
T ss_pred CCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE---E-C
Confidence 87544443333 248999999988665444445678888999999999999999999 999999999999999 3 5
Q ss_pred CCeEEEeeccccccCCC
Q 040003 269 APLKTIDFGLSMFFRPG 285 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~ 285 (489)
+.++|+|||+|+.....
T Consensus 154 ~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 154 GKPYIIDVSQAVELDHP 170 (190)
T ss_pred CCEEEEEcccceecCCC
Confidence 77999999999887654
No 379
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.92 E-value=8e-24 Score=210.62 Aligned_cols=149 Identities=30% Similarity=0.413 Sum_probs=127.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
..+|.+.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+++++.+ +||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhcccccccc
Confidence 4569999999999999999999999999999999865432 3456788999999999 899999999776543
Q ss_pred ---------CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 202 ---------VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 202 ---------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
...|+||||+. ++|.+++. .+.+++..++.++.||+.||.|||++||+||||||+||++.. .++.+|
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~--~~~~~k 155 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVLK 155 (342)
T ss_pred cccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCceEE
Confidence 36899999996 58887764 457899999999999999999999999999999999999942 345789
Q ss_pred EEeeccccccC
Q 040003 273 TIDFGLSMFFR 283 (489)
Q Consensus 273 l~DFGla~~~~ 283 (489)
|+|||++....
T Consensus 156 l~dfg~~~~~~ 166 (342)
T cd07854 156 IGDFGLARIVD 166 (342)
T ss_pred ECCcccceecC
Confidence 99999997653
No 380
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.91 E-value=1.7e-23 Score=203.70 Aligned_cols=188 Identities=14% Similarity=0.125 Sum_probs=131.8
Q ss_pred cceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHH--------HHHHHHHHHHHHhcCCCCeeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDV--------EDVRREIRIMHHLAGHPNVIQIVG 196 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~--------~~~~~E~~~l~~l~~hpniv~~~~ 196 (489)
+.|++.++||+|+||+||+|.+..+ +..+|+|+............ .....+...+..+ +|+||+++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~ 90 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPKYYG 90 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCcEEE
Confidence 4699999999999999999998877 66777776433221110000 1112333444555 7999999998
Q ss_pred EEEeCC----eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 197 AYEDAV----AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 197 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
++.... ..+++||++. .++.+.+......++..+..++.|++.||.|||+++|+||||||+|||+ +.++.+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~~~~~ 166 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGNNRGY 166 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCcEE
Confidence 765543 4578888874 4666666555557888899999999999999999999999999999999 6678899
Q ss_pred EEeeccccccCCCCcee-------e--eeeccC---------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 273 TIDFGLSMFFRPGLTFR-------V--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 273 l~DFGla~~~~~~~~~~-------~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+|||+|+.+....... . ..+..| . -+-++.+.++.+++.|..+|...
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999998764321100 0 111112 1 11234477888888888887643
No 381
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=4.3e-26 Score=227.10 Aligned_cols=189 Identities=24% Similarity=0.430 Sum_probs=161.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.++.|+++..+|.|+||.||+|+++.+++..|+|+++.. ...+..-+..||-+++.+ +|||||.+++.|.....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecC-CCcChHHHHhhhhhhcCc
Confidence 5677899999999999999999999999999999999654 345667788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+||||.||+|.+...-.+.+++.++..+++..+.+++|||+.|-+|||||-+|||+ .+.+.+||+|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhhh
Confidence 9999999999999988778899999999999999999999999999999999999999 6678899999999988754
Q ss_pred CCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCC
Q 040003 285 GLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 285 ~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~ 323 (489)
....+.-+ -+.|||...+-. ..=.+|-|.--.++|.
T Consensus 165 ti~Krksf-iGtpywmapEva--averkggynqlcdiwa 200 (829)
T KOG0576|consen 165 TIAKRKSF-IGTPYWMAPEVA--AVERKGGYNQLCDIWA 200 (829)
T ss_pred hhhhhhcc-cCCccccchhHH--HHHhcccccccccccc
Confidence 43332222 233888875433 3335677777788884
No 382
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.91 E-value=1.3e-23 Score=202.94 Aligned_cols=186 Identities=28% Similarity=0.412 Sum_probs=148.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|++|.||+|.+..+++.+|+|.+..... .......+.+|+++++++ +|+||+++++++.+....|+|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEe
Confidence 5677899999999999999999999999999865432 223456788999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT- 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~- 287 (489)
|+.+ +|.+.+... +.+++..+..++.+++.||.|||++||+|+||||+||++ +.++.+||+|||.+........
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCccc
Confidence 9975 888877664 578999999999999999999999999999999999999 6678899999999987755431
Q ss_pred eee-e----------eec--cC--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 288 FRV-W----------LRL--HF--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 288 ~~~-~----------~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
... . +.+ .+ .-+-++.+.++.+++.|...|+...
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~ 203 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS 203 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 110 0 111 11 1112344778888888887776543
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.91 E-value=6.9e-24 Score=222.49 Aligned_cols=148 Identities=24% Similarity=0.364 Sum_probs=107.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCC----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEE-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGA----- 197 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~----- 197 (489)
.+.|.+.++||+|+||.||+|++..+ +..||+|.+..... .+....| . +... .+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~-l~~~-~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-R-VRRA-CPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-H-HHhh-chhhHHHHHHhhhccc
Confidence 45699999999999999999999988 89999998753211 1111111 1 1111 12233222221
Q ss_pred -EEeCCeEEEEEeecCCCchHHHHHHcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 040003 198 -YEDAVAVHVVMELCAGGELFDRIIQRGH--------------------YTERKAADLTRIIVGVVEACHSLGVMHRDLK 256 (489)
Q Consensus 198 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlK 256 (489)
......+||||||+.+++|.+++..... .....+..++.||+.||+|||++||||||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 2456789999999999999998864321 1123456789999999999999999999999
Q ss_pred CCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 257 PENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 257 p~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||+.. ..+.+||+|||+|+.+..
T Consensus 283 P~NILl~~--~~~~~KL~DFGlA~~l~~ 308 (566)
T PLN03225 283 PQNIIFSE--GSGSFKIIDLGAAADLRV 308 (566)
T ss_pred HHHEEEeC--CCCcEEEEeCCCcccccc
Confidence 99999932 356899999999986543
No 384
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=9e-24 Score=208.57 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=174.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.....+||-|.||.||.|+++.-...||||.++. +.-.+++|+.|+.+|+.+ +|||+|+|+|.|.....+|||.|
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE----DtMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhh----cchhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEEe
Confidence 3456789999999999999999889999999864 344678999999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||..|+|++||.+.. .++......++.||..|++||..+++|||||-..|+|+ .++..||++||||++++. +++
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMt-gDT 419 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMT-GDT 419 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhc-CCc
Confidence 999999999997653 36666778888999999999999999999999999999 788899999999999875 444
Q ss_pred eeeeeeccCCCCcch-----------------hHHHHHHHh-cccccCCCCCCCCCCCCCCCcchhh-hhhccHHHHHHH
Q 040003 288 FRVWLRLHFLFFQKQ-----------------RQSVLQTRL-VRNLNEPGSLWPDKVAVPPIGDRVI-AESLSEEEIAGL 348 (489)
Q Consensus 288 ~~~~~~~~ypf~~~~-----------------~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 348 (489)
++......||..... .+.++-+|- .|.-++|+-.-.....+-...-++- +....+ ..-+|
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPp-kVYeL 498 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPP-KVYEL 498 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCH-HHHHH
Confidence 444322333321111 122333332 1222222211100000000001111 112222 22222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhCCC--CCHHHHHHHHHcc
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRVGAN--LMDSEIDGLMQAG 391 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~lg~~--~~~~~i~~l~~~~ 391 (489)
+-.|+..++.-+.+..|+-.++..+... .+++--++|-+..
T Consensus 499 --MraCW~WsPsDRPsFaeiHqafEtmf~~sSisdEV~keLgk~~ 541 (1157)
T KOG4278|consen 499 --MRACWNWSPSDRPSFAEIHQAFETMFSSSSISDEVQKELGKNN 541 (1157)
T ss_pred --HHHHhcCCcccCccHHHHHHHHHHHhccccccHHHHHHHhhcc
Confidence 2257788999999999999999887533 3444334444443
No 385
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.91 E-value=8.6e-24 Score=207.22 Aligned_cols=150 Identities=25% Similarity=0.346 Sum_probs=127.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
+.|++.++||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+++++.+ +||||+++++++.+.
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhc-CCCCccchhhheecccccccc
Confidence 56999999999999999999999999999999986543222 1224567899999999 899999999987543
Q ss_pred --CeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
..+|+||||+.+ +|...+.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~ 161 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGL 161 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCcc
Confidence 357999999965 67666654 3579999999999999999999999999999999999999 6788899999999
Q ss_pred ccccC
Q 040003 279 SMFFR 283 (489)
Q Consensus 279 a~~~~ 283 (489)
++...
T Consensus 162 ~~~~~ 166 (311)
T cd07866 162 ARPYD 166 (311)
T ss_pred chhcc
Confidence 98654
No 386
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.91 E-value=5.2e-23 Score=200.48 Aligned_cols=185 Identities=19% Similarity=0.217 Sum_probs=144.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||||.+.+.. .......+.+|+.++..+.+||||+++++++.+....|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 45899999999999999999999999999999987542 2234456677888787775699999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+. ++|.+++.. .+.+++..+..++.+++.|+.|||+ .||+||||||+||++ +.++.+||+|||++..+...
T Consensus 93 ~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhccCC
Confidence 99985 467666544 3568899999999999999999997 699999999999999 66788999999999876432
Q ss_pred Cceee-eeeccC-------------CC----CcchhHHHHHHHhcccccCC
Q 040003 286 LTFRV-WLRLHF-------------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~-~~~~~y-------------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
..... .....| ++ +-.+.+.++.+++.|..+|.
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 219 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK 219 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence 22111 000011 01 11244778888888887764
No 387
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91 E-value=1e-23 Score=201.40 Aligned_cols=152 Identities=24% Similarity=0.423 Sum_probs=128.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+.+|+.+++.+ +||||+++++++.+....|+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence 488999999999999999999888777777776543221 122334567899999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||+.+++|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+||++. ++.+||+|||++..+
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 9999999999888753 34689999999999999999999999999999999999993 245999999999876
Q ss_pred CCC
Q 040003 283 RPG 285 (489)
Q Consensus 283 ~~~ 285 (489)
...
T Consensus 156 ~~~ 158 (260)
T cd08222 156 MGS 158 (260)
T ss_pred CCC
Confidence 543
No 388
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.91 E-value=4.9e-23 Score=202.40 Aligned_cols=146 Identities=22% Similarity=0.267 Sum_probs=123.7
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
.+++.+|.| |.||+++...+++.||+|++.... ........+.+|+++++.+ +|+||+++++++.+....|++|||
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEec
Confidence 344444444 556666667799999999997642 2345667899999999999 799999999999999999999999
Q ss_pred cCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 211 CAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 211 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||.+..+.
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~ 152 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMI 152 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeec
Confidence 9999999988753 458899999999999999999999999999999999999 567889999999987553
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=6.8e-24 Score=212.18 Aligned_cols=156 Identities=27% Similarity=0.365 Sum_probs=136.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+...+.++||+|.||+|++|.+...+ -.||||+++...... ....|++|+.+|.+| +|||+|+|||...+ ..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhc-cCcceeEEeeeecc-chh
Confidence 34567789999999999999887533 358999997665432 678899999999999 89999999999988 678
Q ss_pred EEEEeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 205 HVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|||++++|+|.+.|.+ +..|.......++.||+.|+.||.++++|||||-..|+||. ....||||||||.+-+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRAL 262 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceecc
Confidence 999999999999999987 35688889999999999999999999999999999999994 4567999999999999
Q ss_pred CCCCceee
Q 040003 283 RPGLTFRV 290 (489)
Q Consensus 283 ~~~~~~~~ 290 (489)
..++.+++
T Consensus 263 g~ned~Yv 270 (1039)
T KOG0199|consen 263 GENEDMYV 270 (1039)
T ss_pred CCCCcceE
Confidence 98888775
No 390
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.91 E-value=2.3e-23 Score=196.31 Aligned_cols=167 Identities=19% Similarity=0.178 Sum_probs=131.7
Q ss_pred CCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCchHH
Q 040003 139 GQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD 218 (489)
Q Consensus 139 G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 218 (489)
|.||.||+|++..+++.||+|.+.+.. ...+|...+... .||||+++++++.+....|+||||+.||+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 889999999999999999999986532 122344445555 69999999999999999999999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--------
Q 040003 219 RIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-------- 290 (489)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-------- 290 (489)
++.....+++..+..++.|++.||.|||++||+||||||+||++ +.++.++|+|||++...........
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aP 151 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAP 151 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccccccCCcCccccCC
Confidence 99887789999999999999999999999999999999999999 6678899999998866543211100
Q ss_pred -ee-eccC--CCCcchhHHHHHHHhcccccC
Q 040003 291 -WL-RLHF--LFFQKQRQSVLQTRLVRNLNE 317 (489)
Q Consensus 291 -~~-~~~y--pf~~~~~~~~~~~i~~~~~~~ 317 (489)
.. ...+ .-+-++.+.++.+++.|...+
T Consensus 152 E~~~~~~~~~~~DvwslG~il~el~~g~~~~ 182 (237)
T cd05576 152 EVGGISEETEACDWWSLGAILFELLTGKTLV 182 (237)
T ss_pred cccCCCCCCchhhHHHHHHHHHHHHHCcchh
Confidence 01 0111 112234477888888887544
No 391
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.91 E-value=3.2e-23 Score=205.01 Aligned_cols=238 Identities=24% Similarity=0.338 Sum_probs=166.6
Q ss_pred cceeecceeccCCceEEEEEEEcCC----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+..++.++||+|-||.||+|..... .-.||||.-+.. .+.+..+.|+.|..+|+.+ +|||||+++|.+.+. .
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~-P 464 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--CTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQ-P 464 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC--CChhhHHHHHHHHHHHHhC-CCcchhheeeeeecc-c
Confidence 3456678899999999999987543 335888876543 3455688999999999999 899999999999865 7
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|||||+++-|.|..+|..+ ..++......++.||+.||.|||+.+.|||||-..|||+. ...-|||+||||++.+
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYL 541 (974)
T ss_pred eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhc
Confidence 89999999999999999765 4688888999999999999999999999999999999994 4455999999999998
Q ss_pred CCCCceee--------eeecc---C-CCCcch----hH-HHHHHHhcccccCCCCCCCCCCCCCCCcchhh-hhhccHHH
Q 040003 283 RPGLTFRV--------WLRLH---F-LFFQKQ----RQ-SVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVI-AESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~--------~~~~~---y-pf~~~~----~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 344 (489)
.+...+.. |+... | =|...+ .+ |+.+.+..|.-+|-+--..+....-..+.+.- +.+..+ .
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp-~ 620 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPP-A 620 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCCh-H
Confidence 77665543 22111 1 111111 12 33333334544444322222111111111211 112222 2
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+--| .-++++-++..+....|++..|..+
T Consensus 621 LYsl--mskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 621 LYSL--MSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred HHHH--HHHHhccCcccCCcHHHHHHHHHHH
Confidence 2112 2367888999999999999887665
No 392
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-23 Score=184.47 Aligned_cols=154 Identities=27% Similarity=0.352 Sum_probs=134.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|.++++||.|+||.+|+|....+|+.||||+-+... ....+..|..+.+.|.+...|..+..++.+..+-.+|
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 45999999999999999999999999999999865432 1245778999999997778999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+++ |.+|.+++.- ...++...+..++-|++.-++|+|.++.|||||||+|+|++-......+.|+|||||+.+.+..
T Consensus 90 MdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred eecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 9998 8899998753 4579999999999999999999999999999999999999765566789999999999987644
Q ss_pred c
Q 040003 287 T 287 (489)
Q Consensus 287 ~ 287 (489)
+
T Consensus 169 t 169 (341)
T KOG1163|consen 169 T 169 (341)
T ss_pred c
Confidence 3
No 393
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.90 E-value=5e-23 Score=204.90 Aligned_cols=186 Identities=25% Similarity=0.357 Sum_probs=143.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
...|.+.+.||+|+||.||+|++..+++.||+|++.+.. ........+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-ccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence 456999999999999999999999999999999986532 2223345678999999999 899999999998654
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..+|+||||+.+ +|..++ ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~~~ 165 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGLAR 165 (342)
T ss_pred CceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCCCc
Confidence 356999999964 676554 3468999999999999999999999999999999999999 667889999999998
Q ss_pred ccCCCCceee---------eeec--cCC--CCcchhHHHHHHHhcccccCCCC
Q 040003 281 FFRPGLTFRV---------WLRL--HFL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 281 ~~~~~~~~~~---------~~~~--~yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.......... ++.. .|. -+-.+.+.++.+++.|+..|...
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 166 HADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred CCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543221100 1111 111 11134477888888888877643
No 394
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=2e-24 Score=194.08 Aligned_cols=154 Identities=25% Similarity=0.445 Sum_probs=133.1
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEE-EEEeCCe
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVG-AYEDAVA 203 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~ 203 (489)
.+.+.|.+.+.||+|.||.+-+|+++.+...+++|.+.+.. .....|.+|...--.|+.|.||+.-|+ .|+..+.
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 45577999999999999999999999999999999986532 345788899988778878999998876 5788888
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+.++|||++-|+|..-+.. ..+.|.....++.|++.|++|+|++++||||||.+|||+-+.+ ..+|||||||+.+...
T Consensus 97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeecccccccC
Confidence 9999999999999876644 3577888899999999999999999999999999999998755 4489999999998664
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 175 ~ 175 (378)
T KOG1345|consen 175 T 175 (378)
T ss_pred c
Confidence 3
No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.9e-22 Score=206.72 Aligned_cols=154 Identities=21% Similarity=0.331 Sum_probs=116.2
Q ss_pred ccceeecceeccCCceEEEEEEEc----------------CCCcEEEEEEeecccCCCHH-----------HHHHHHHHH
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK----------------ATQKEFACKSIAKRKLTTEE-----------DVEDVRREI 179 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~----------------~~~~~~avK~i~~~~~~~~~-----------~~~~~~~E~ 179 (489)
.+.|++.++||+|+||+||+|... ..++.||||.+......... ..+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 457999999999999999999752 24567999998643211100 112234577
Q ss_pred HHHHHhcCCCC-----eeEEEEEEEe--------CCeEEEEEeecCCCchHHHHHHcC----------------------
Q 040003 180 RIMHHLAGHPN-----VIQIVGAYED--------AVAVHVVMELCAGGELFDRIIQRG---------------------- 224 (489)
Q Consensus 180 ~~l~~l~~hpn-----iv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------- 224 (489)
.++.++ +|.+ +++++++|.. .+..||||||+.+++|.+++....
T Consensus 224 ~~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 788888 4544 3677777643 356899999999999999886421
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 225 --HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 225 --~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
.++...+..++.|++.+|.|||+.+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~ 361 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCT 361 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCcccccc
Confidence 12445678899999999999999999999999999999 6678899999999976543
No 396
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.90 E-value=4.4e-24 Score=207.11 Aligned_cols=190 Identities=20% Similarity=0.249 Sum_probs=158.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC-----CCCeeEEEEEEEe
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-----HPNVIQIVGAYED 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-----hpniv~~~~~~~~ 200 (489)
+..+|.+....|+|-||+|.+|.+...|..||||+|... +-....=++|++||++|.. --|+++|+..|..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 345699999999999999999999999999999999754 2333455689999999942 2489999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
.+++|||+|-+ ..+|.+.|++.|. +....++.+.+|++.||..|-..||+|.||||+|||++ .....+||||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfG 582 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFG 582 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCc
Confidence 99999999988 5699999988764 66778899999999999999999999999999999994 346779999999
Q ss_pred cccccCCCCceee-----------eeecc--CCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 278 LSMFFRPGLTFRV-----------WLRLH--FLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 278 la~~~~~~~~~~~-----------~~~~~--ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
.|.+.......-. +|... ||...|+.+|.++++..|++-||+...
T Consensus 583 SA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 583 SASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred cccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 9998876554322 44333 477888899999999999999998654
No 397
>PRK10345 hypothetical protein; Provisional
Probab=99.89 E-value=1.1e-22 Score=185.81 Aligned_cols=141 Identities=18% Similarity=0.211 Sum_probs=108.8
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc----CCCCeeEEEEEEEeCC---e-E
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA----GHPNVIQIVGAYEDAV---A-V 204 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~~~~~~---~-~ 204 (489)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.|. +||||++++++++++. . +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 45799999999995 6766655 6998865322 23467899999999994 3799999999998873 4 3
Q ss_pred EEEEee--cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeecccc
Q 040003 205 HVVMEL--CAGGELFDRIIQRGHYTERKAADLTRIIVGVV-EACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSM 280 (489)
Q Consensus 205 ~lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l-~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla~ 280 (489)
.+|||| +.+|+|.+++.+ +.+++. ..++.+++.++ +|||+++||||||||+|||+...+ ....++|+||+.++
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 478999 557999999965 456655 35677777776 999999999999999999996432 34579999955454
Q ss_pred cc
Q 040003 281 FF 282 (489)
Q Consensus 281 ~~ 282 (489)
.+
T Consensus 158 ~~ 159 (210)
T PRK10345 158 TF 159 (210)
T ss_pred ce
Confidence 43
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3e-22 Score=193.45 Aligned_cols=136 Identities=24% Similarity=0.415 Sum_probs=117.4
Q ss_pred Ccc-cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-------CCeeEEEE
Q 040003 125 NLK-EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-------PNVIQIVG 196 (489)
Q Consensus 125 ~~~-~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-------pniv~~~~ 196 (489)
.|. .+|.+.++||.|.|++||+|++..+.+.||+|+++.. ....+....||.+|+++..+ .+||+|++
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD 149 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLD 149 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeec
Confidence 344 6899999999999999999999999999999998643 45567788999999998533 36999999
Q ss_pred EEEe----CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeC
Q 040003 197 AYED----AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 197 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~ 265 (489)
.|.. +.++|+|+|++ |-+|+.+|... ..++...++.|++||+.||.|||. .||||-||||+||||...
T Consensus 150 ~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 150 HFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred cceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 9965 56899999998 67898888764 458999999999999999999995 699999999999999643
No 399
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=3.9e-22 Score=164.41 Aligned_cols=144 Identities=31% Similarity=0.567 Sum_probs=133.9
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH-hhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH-LNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~-~~~~~~ 416 (489)
..++.++...++..|..||.+++|+|+.+||+-+++.+|..+...++.+++..+|.++.|.|+|++|+..|.. +....+
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt 104 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT 104 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc
Confidence 3577888899999999999999999999999999999999999999999999999999999999999998754 334457
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+++..+|+.+|.|++|.|+..+|+.+.+.+| ++++++.+||+++|.|+||.|+-+||..+|++.
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 78899999999999999999999999999999 899999999999999999999999999999753
No 400
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=7.5e-23 Score=197.11 Aligned_cols=155 Identities=22% Similarity=0.329 Sum_probs=131.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEEeCC----eE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL-AGHPNVIQIVGAYEDAV----AV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~~----~~ 204 (489)
..+..+||+|.||.||+|... ++.||||++. .++.+.+.+|-+|.+.. ..|+||++++++-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~--~~~VAVKifp------~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD--NRLVAVKIFP------EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc--CceeEEEecC------HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 566788999999999999764 5899999984 45667888998888764 26999999999876655 89
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL---------GVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---------~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
|||+||-+.|+|.++|..+ .++......++.-+..||.|||+- .|+|||||..|||+ ..+++.-|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeec
Confidence 9999999999999999764 788999999999999999999963 59999999999999 7788999999
Q ss_pred eccccccCCCCcee----eeeeccC
Q 040003 276 FGLSMFFRPGLTFR----VWLRLHF 296 (489)
Q Consensus 276 FGla~~~~~~~~~~----~~~~~~y 296 (489)
||||..+.++.... .+++.+|
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RY 384 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRY 384 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhh
Confidence 99999998665433 3666665
No 401
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2e-22 Score=186.27 Aligned_cols=154 Identities=25% Similarity=0.400 Sum_probs=134.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+.+.|...-+++.||||.-..+. +.-++..|.+..+.|.+.++|..+|.+...+.+-.|||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3999999999999999999999999999999765432 22467789999999988999999999889999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~~~~ 285 (489)
|++ |.+|.|++.-. .+|+...+..++.|++.-++|+|++.+|.|||||+|+||+.. .....|.|+|||+|+.+.+.
T Consensus 104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 998 78999987644 479999999999999999999999999999999999999532 23456999999999999877
Q ss_pred Cce
Q 040003 286 LTF 288 (489)
Q Consensus 286 ~~~ 288 (489)
.+.
T Consensus 183 ~Tk 185 (449)
T KOG1165|consen 183 KTK 185 (449)
T ss_pred ccc
Confidence 653
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=2.2e-22 Score=204.64 Aligned_cols=184 Identities=20% Similarity=0.273 Sum_probs=149.9
Q ss_pred eeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.+..++||+|+||+||+|.+...|+ .||+|++.... ..+....++.|+-+|.+| +|||+++|++++.... +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HH
Confidence 3446789999999999998866554 57888876543 334457889999999999 8999999999998765 88
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||++||++|+|.++++.+ +.+.......|..||++|+.|||.+++|||||-..|||+ ..-..+||.|||+|+...+
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCc
Confidence 999999999999999764 578889999999999999999999999999999999999 5667799999999999887
Q ss_pred CCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 285 GLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 285 ~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
...-...-.+.||.. -..++.|..+.+...++.|..
T Consensus 851 d~~ey~~~~gK~pik----wmale~i~~~~~thqSDVWsf 886 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIK----WMALESIRIRKYTHQSDVWSF 886 (1177)
T ss_pred ccccccccccccCcH----HHHHHHhhccCCCchhhhhhh
Confidence 665444444445431 234566777778888888854
No 403
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=3.7e-21 Score=216.97 Aligned_cols=232 Identities=15% Similarity=0.139 Sum_probs=160.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|...+.||+|+||.||+|++..++..||+|.+..... ....|+++|+++ +|||||++++++.+....|+||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEEE
Confidence 35566789999999999999999999999999864321 113468899999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||++|+|.+++. .+++.....++.+++.|++||| +.+|+||||||+||++ +.+...++. ||.+......
T Consensus 763 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~~~~~ 835 (968)
T PLN00113 763 EYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGLLCTD 835 (968)
T ss_pred eCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccccccC
Confidence 9999999999885 3788889999999999999999 6699999999999999 555556665 6665443221
Q ss_pred Ccee---e------eeeccC--CCCcchhHHHHHHHhcccccCCCCCCCCCC------------CCCCCcchhhhh--hc
Q 040003 286 LTFR---V------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV------------AVPPIGDRVIAE--SL 340 (489)
Q Consensus 286 ~~~~---~------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~--~~ 340 (489)
.... . +....| --+-++.+.++.+++.|+.++....-.... .........+.. ..
T Consensus 836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (968)
T PLN00113 836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV 915 (968)
T ss_pred CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence 1110 0 111112 112235588999999998877432100000 000000111100 11
Q ss_pred cHHHHHH-HHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 341 SEEEIAG-LKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 341 ~~~~~~~-l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..++..+ +.-+-+++..|++.|.++.|+.+.|.++
T Consensus 916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 2222222 2334467888889999999988887765
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.87 E-value=6.6e-21 Score=177.19 Aligned_cols=150 Identities=42% Similarity=0.746 Sum_probs=134.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|.+.+.||+|++|.||+|.+..+++.+|+|.+...... ...+.+.+|++.++++ +|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence 56778999999999999999988999999998754322 2567889999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 210 LCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|+.+++|.+++..... +++..+..++.+++.++.+||..+++|+||+|.||++ +..+.++|+|||++..+...
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCc
Confidence 9999999999877666 8999999999999999999999999999999999999 55688999999999988654
No 405
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=1.7e-21 Score=178.30 Aligned_cols=143 Identities=18% Similarity=0.147 Sum_probs=116.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHH------HHHHHHHHHHhcCCCCeeEEEEEEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED------VRREIRIMHHLAGHPNVIQIVGAYE 199 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~------~~~E~~~l~~l~~hpniv~~~~~~~ 199 (489)
+..+|++.+.||.|+||.||++.. ++..+|+|++.......+...+. +.+|++.+.+| .|++|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence 346799999999999999999654 46689999997655444444444 57999999999 8999999998876
Q ss_pred eC--------CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 200 DA--------VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 200 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
.. +..+|||||++|.+|.+.. .+++ ....+++.++..||..||+|||+||+||++ +.++ +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili---~~~g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV---SKNG-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE---eCCC-E
Confidence 43 3589999999999997763 2333 346689999999999999999999999999 4455 9
Q ss_pred EEEeeccccccC
Q 040003 272 KTIDFGLSMFFR 283 (489)
Q Consensus 272 kl~DFGla~~~~ 283 (489)
+|+|||..+...
T Consensus 174 ~liDfg~~~~~~ 185 (232)
T PRK10359 174 RIIDLSGKRCTA 185 (232)
T ss_pred EEEECCCccccc
Confidence 999999887663
No 406
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=5.1e-21 Score=183.25 Aligned_cols=147 Identities=22% Similarity=0.341 Sum_probs=124.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEEeC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL-AGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~---- 201 (489)
.....+.+.||+|.||.||+|.++ |+.||||++... +-..+.||.+|.+.. -+|+||..+++.-..+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 345788999999999999999885 779999998643 225677888888764 3899999999875433
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL--------GVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
.++|||.+|-+.|+|+|+|.+ ..++......++..++.||.+||.. .|.|||||..|||+ ..++..-|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~I 357 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 357 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEE
Confidence 368999999999999999976 5789999999999999999999953 49999999999999 77889999
Q ss_pred EeeccccccCCC
Q 040003 274 IDFGLSMFFRPG 285 (489)
Q Consensus 274 ~DFGla~~~~~~ 285 (489)
+|+|||......
T Consensus 358 ADLGLAv~h~~~ 369 (513)
T KOG2052|consen 358 ADLGLAVRHDSD 369 (513)
T ss_pred eeceeeEEeccc
Confidence 999999887654
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-22 Score=185.14 Aligned_cols=185 Identities=20% Similarity=0.344 Sum_probs=148.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
.+|.-++.+|.|.- .|..|.+.-+++.||+|.+... ........+..+|..++..+ .|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHHH
Confidence 35777888999988 7778888889999999998765 33344556778999999999 899999999998533
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+|+|||||. .+|...+. -.++...+..++.|++.|++|||+.||+||||||+||++ ..++.+||.|||+|+.
T Consensus 94 ~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhhcc
Confidence 46899999995 47877765 347778899999999999999999999999999999999 7788999999999987
Q ss_pred cCCCCceee------------eeeccC--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 282 FRPGLTFRV------------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 282 ~~~~~~~~~------------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
-...-..+. ++..+| --..++.+|++.+++.|.+-|++..
T Consensus 168 e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d 221 (369)
T KOG0665|consen 168 EDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD 221 (369)
T ss_pred cCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch
Confidence 655422111 233334 2333566999999999999999753
No 408
>smart00090 RIO RIO-like kinase.
Probab=99.87 E-value=1.1e-21 Score=183.48 Aligned_cols=148 Identities=19% Similarity=0.169 Sum_probs=115.2
Q ss_pred ceeecceeccCCceEEEEEE-EcCCCcEEEEEEeecccCCC-------------------HH--HHHHHHHHHHHHHHhc
Q 040003 129 MYSLGRKLGQGQFGTTFLCV-EKATQKEFACKSIAKRKLTT-------------------EE--DVEDVRREIRIMHHLA 186 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~-~~~~~~~~avK~i~~~~~~~-------------------~~--~~~~~~~E~~~l~~l~ 186 (489)
.|.+.+.||+|+||.||+|+ +..+|+.||+|++....... .. ....+.+|++++.++
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L- 107 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL- 107 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 38889999999999999998 67789999999987543110 00 113467899999999
Q ss_pred CC--CCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEeee
Q 040003 187 GH--PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG-VMHRDLKPENFLFI 263 (489)
Q Consensus 187 ~h--pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-iiHrDlKp~Nill~ 263 (489)
.+ ..+.+++++ ...|+||||+.|++|.........+....+..++.|++.++.+||..| |+||||||+|||+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli- 182 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV- 182 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE-
Confidence 44 234455543 235899999999888765544455666677899999999999999999 9999999999999
Q ss_pred eCCCCCCeEEEeeccccccCCC
Q 040003 264 NQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 264 ~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+ .+.++|+|||+|......
T Consensus 183 --~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 183 --H-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred --E-CCCEEEEEChhhhccCCc
Confidence 4 567999999999866543
No 409
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=4.3e-21 Score=171.95 Aligned_cols=137 Identities=23% Similarity=0.309 Sum_probs=105.8
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+...|++|+||+||++.. .+..++.+.+........ -....+.+|+++|++|.+|++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3456899999999997754 566777666654332111 1123578999999999767899999886 45699999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL-KPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDl-Kp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+.|.+|...+.. . ...++.|++.+|++||++||||||| ||+|||+ +.++.++|+|||+|....
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecC
Confidence 9999988654321 1 2357789999999999999999999 7999999 567789999999997543
No 410
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.86 E-value=1e-21 Score=200.83 Aligned_cols=149 Identities=32% Similarity=0.430 Sum_probs=122.5
Q ss_pred eeecceeccCCceE-EEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGT-TFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~-Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
|.-.+.+|.|+-|+ ||+|.. .|+.||||.+.. +......+||.+|+.-..|||||++|+.-.+....||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44456799998886 799876 578999998743 334567899999999888999999999999999999999
Q ss_pred eecCCCchHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGH----YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~ 282 (489)
|+|.. +|.+++...+. ......+.++.|++.||.+||+.+||||||||.||||... +...+++|+|||+++.+
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 99965 99999876311 1114457889999999999999999999999999999754 34467999999999998
Q ss_pred CCCCc
Q 040003 283 RPGLT 287 (489)
Q Consensus 283 ~~~~~ 287 (489)
..+..
T Consensus 662 ~~~~s 666 (903)
T KOG1027|consen 662 AGGKS 666 (903)
T ss_pred CCCcc
Confidence 76554
No 411
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.86 E-value=3.4e-22 Score=190.53 Aligned_cols=146 Identities=22% Similarity=0.413 Sum_probs=128.7
Q ss_pred cccceeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.+.|.++++||+|+|++||++.+.. ..+.||+|.+.... ...++.+|+++|..+.++.||+.+.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34569999999999999999998877 78899999986432 23678999999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+..+||||+++-+..+++. .++...++.+++.++.||.++|.+|||||||||+|+|++.. .+.-.|+|||||..
T Consensus 109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~--t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR--TQRGVLVDFGLAQR 182 (418)
T ss_pred eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc--cCCceEEechhHHH
Confidence 9999999999988877764 46788999999999999999999999999999999999654 44568899999984
No 412
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.86 E-value=2.4e-20 Score=170.78 Aligned_cols=145 Identities=39% Similarity=0.654 Sum_probs=128.4
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|++|.||++....+++.+++|++....... ..+.+.+|+++++.+ .|++|+++++++......+++|||+.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999987543221 356789999999999 79999999999999999999999999999
Q ss_pred hHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccccccCCCC
Q 040003 216 LFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 216 L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla~~~~~~~ 286 (489)
|.+++... ..++...+..++.+++.++.+||+.|++|+||+|.||++ +. .+.++|+|||.+.......
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~---~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL---DSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE---eCCCCcEEEecCCceEEccCCc
Confidence 99988765 468999999999999999999999999999999999999 44 6789999999998776543
No 413
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.85 E-value=6.3e-20 Score=172.28 Aligned_cols=140 Identities=41% Similarity=0.710 Sum_probs=125.2
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCchHHH
Q 040003 140 QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDR 219 (489)
Q Consensus 140 ~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 219 (489)
+||.||+|.+..+++.+|+|++........ ...+.+|+++++++ +|+||+++++++......+++|||+.+++|..+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999998899999999875433221 57889999999999 899999999999999999999999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 220 IIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 220 l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+.....++...+..++.+++.++.+||..+|+|+||+|.||++ +.++.++|+|||++......
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~ 140 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPG 140 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccc
Confidence 8776668999999999999999999999999999999999999 55688999999999887654
No 414
>PTZ00183 centrin; Provisional
Probab=99.84 E-value=6e-20 Score=161.61 Aligned_cols=146 Identities=31% Similarity=0.575 Sum_probs=132.4
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~ 416 (489)
..++.++..++..+|..+|.+++|+|+..||..+|..+|...+..++..++..+|.+++|.|+|+||+.++... .....
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 88 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP 88 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence 46788899999999999999999999999999999999988888999999999999999999999999887543 23344
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
++.++.+|+.+|.|++|.|+.+||..++..+| +++.++..++..+|.|++|.|+|+||+.+|...+.
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcccC
Confidence 57789999999999999999999999999887 88999999999999999999999999999987543
No 415
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=3e-20 Score=182.89 Aligned_cols=150 Identities=29% Similarity=0.472 Sum_probs=124.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCC-cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC---CCCeeEEEEEE-EeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQ-KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG---HPNVIQIVGAY-EDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~---hpniv~~~~~~-~~~~~ 203 (489)
.|.+.++||+|+||.||+|.+..++ ..+|+|+......... ..+..|+.+|..+.. -.++..+++.+ .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 5999999999999999999988774 6789998765322111 267789999999942 36899999999 57888
Q ss_pred EEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--CCCCeEEEeeccc
Q 040003 204 VHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ--EEAPLKTIDFGLS 279 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~--~~~~~kl~DFGla 279 (489)
.||||+++ |.+|.++.... +.++...+..++.|++.+|+++|+.|+|||||||+|+++.... ....+.|+|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999998 78999977544 5799999999999999999999999999999999999996532 1257999999999
Q ss_pred ccc
Q 040003 280 MFF 282 (489)
Q Consensus 280 ~~~ 282 (489)
+.+
T Consensus 175 r~~ 177 (322)
T KOG1164|consen 175 RRF 177 (322)
T ss_pred ccc
Confidence 944
No 416
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=5.3e-20 Score=170.14 Aligned_cols=138 Identities=27% Similarity=0.312 Sum_probs=113.5
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+.||+|++|.||+|.+ .+..+++|+......... ....++.+|++++..+ .|++|+....++.+....++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999987 667899998654322211 1234678999999999 7999887777777778899999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||++|++|.+.+.... . ....++.+++.+|.++|+.|++|||++|+|||+. .+.++|+|||++...
T Consensus 79 e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~~ 144 (211)
T PRK14879 79 EYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccCC
Confidence 9999999998875432 2 7788899999999999999999999999999993 567999999999763
No 417
>PTZ00184 calmodulin; Provisional
Probab=99.83 E-value=8.7e-20 Score=158.83 Aligned_cols=143 Identities=38% Similarity=0.712 Sum_probs=129.2
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~ 416 (489)
..++.++...++..|..+|.+++|.|+.+||..++..++..+...++..++..+|.+++|.|+|+||+.++... .....
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~ 82 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS 82 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH
Confidence 45778889999999999999999999999999999999988888999999999999999999999999887653 22334
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.+..+|+.+|.|++|+|+.+||..++..+| ++.+++..+++.+|.+++|.|+|+||+.+|.+
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 56788999999999999999999999999887 68999999999999999999999999998864
No 418
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.83 E-value=2.7e-19 Score=189.72 Aligned_cols=155 Identities=24% Similarity=0.408 Sum_probs=133.9
Q ss_pred eeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..+.+.||+|.||.|++|.... ....||||.++... ...+.+.+..|+++|+.+..|+||+.++|++...+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 3566799999999999997431 14579999886543 33677899999999999988999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~ 266 (489)
.+++|+|||..|+|..++...+ .+...+...+..||+.|++||++.++|||||-..|||+ .
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi---~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI---T 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe---c
Confidence 9999999999999999998765 37888999999999999999999999999999999999 6
Q ss_pred CCCCeEEEeeccccccCCCCcee
Q 040003 267 EEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
.+..+||+|||+|+.......+.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~ 475 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYR 475 (609)
T ss_pred CCCEEEEccccceeccCCCCceE
Confidence 67789999999999766555544
No 419
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.83 E-value=2.3e-19 Score=146.85 Aligned_cols=139 Identities=28% Similarity=0.569 Sum_probs=129.1
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH-Hhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML-HLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~-~~~~~~~ 416 (489)
..+++.++.+++++|.++|.|++|.|+.++|+.+|..+|..+++++++.++.+ ..|-|+|.-|+.++- ++.....
T Consensus 24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdp 99 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDP 99 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCH
Confidence 46788999999999999999999999999999999999999999999999975 468999999999885 3556677
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.+..||+.||.+++|+|..+.|+++|...| +++++|++|++.+-.|..|.|+|.+|+.++..
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ith 165 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITH 165 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence 89999999999999999999999999999998 89999999999999999999999999999973
No 420
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.82 E-value=1.4e-19 Score=165.80 Aligned_cols=135 Identities=24% Similarity=0.277 Sum_probs=106.5
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCC-----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT-----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.||+|+||.||+|.. ++..+++|......... .....++.+|++++..+ .|+++....-++......++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEE
Confidence 389999999999984 56789999865432221 11235678999999999 67765554445556667799999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|++|++|.+.+..... .++.+++.+|.+||+.||+|||+||+|||+ + .+.++++|||++....
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~---~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV---R-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEE---E-CCcEEEEECCCCcCCC
Confidence 9999999887754321 788999999999999999999999999999 3 5779999999987643
No 421
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.82 E-value=9.6e-20 Score=166.61 Aligned_cols=140 Identities=19% Similarity=0.228 Sum_probs=108.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-------------------HHHHHHHHHHHHHHHhcCCC-
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-------------------EDVEDVRREIRIMHHLAGHP- 189 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-------------------~~~~~~~~E~~~l~~l~~hp- 189 (489)
|.+.+.||+|+||.||+|... +|+.||||++........ .......+|+.++..+ .|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcC
Confidence 788899999999999999875 799999998765321000 0112367899999999 566
Q ss_pred -CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 190 -NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 190 -niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
.++..++ ....++||||++|++|..... ......++.+++.++.++|..||+||||||+||++ +.+
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~~ 161 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DDD 161 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cCC
Confidence 4455544 245689999999998865432 13456788999999999999999999999999999 567
Q ss_pred CCeEEEeeccccccCC
Q 040003 269 APLKTIDFGLSMFFRP 284 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~ 284 (489)
+.++|+|||++.....
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 8899999999976654
No 422
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.80 E-value=4.3e-19 Score=186.37 Aligned_cols=140 Identities=23% Similarity=0.268 Sum_probs=111.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|...+.||+|+||+||+|.+... .+++|+...+... .....+++.+|+++++.+ +|++|+..+.++.+...
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCCC
Confidence 456678999999999999987543 4455543222111 112345788999999999 79999988888777778
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.++||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+ + ++.++|+|||+|+...
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl---~-~~~~~liDFGla~~~~ 478 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV---R-DDRLYLIDFGLGKYSD 478 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE---E-CCcEEEEeCcccccCC
Confidence 899999999999998874 346788999999999999999999999999999 2 4569999999998753
No 423
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.79 E-value=9.1e-19 Score=140.98 Aligned_cols=139 Identities=23% Similarity=0.455 Sum_probs=123.5
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC--CCcceehHHHHHHHHHhhh---h
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSGTMDYGEFIAAMLHLNK---I 414 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d--~~g~I~f~eF~~~~~~~~~---~ 414 (489)
+++++..+++++|..||..++|+|+..+....|+++|.++++.++.+.+...+.+ +-.+|+|++|+.++..+.+ .
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q 84 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ 84 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence 5667789999999999999999999999999999999999999999999998877 4578999999998876532 2
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
-..+...+.++.||++++|.|...||+.+|..+| ++++|++.++.-. .|.+|.|+|+.|++.+.
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 3356677889999999999999999999999999 9999999999875 58899999999998764
No 424
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.79 E-value=6.3e-19 Score=159.68 Aligned_cols=142 Identities=17% Similarity=0.225 Sum_probs=101.4
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHH---------------------HHHHHHHHHHHhcCC-CC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE---------------------DVRREIRIMHHLAGH-PN 190 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-pn 190 (489)
++.||+|+||+||+|.+. +++.||||++............ ....|...+.++..+ -.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999876 7899999998754322111111 124677777777322 23
Q ss_pred eeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCC
Q 040003 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 191 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~ 269 (489)
+.+.+++ ...++||||++|+.+........... ..+..++.+++.++.++|. .||+||||||+||++ + ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili---~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV---D-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE---E-CC
Confidence 5555543 24689999999854432111111111 6678899999999999999 999999999999999 4 67
Q ss_pred CeEEEeeccccccCC
Q 040003 270 PLKTIDFGLSMFFRP 284 (489)
Q Consensus 270 ~~kl~DFGla~~~~~ 284 (489)
.++|+|||.|.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 899999999987654
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=5.9e-18 Score=180.99 Aligned_cols=181 Identities=24% Similarity=0.384 Sum_probs=132.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~ 205 (489)
+.|.|.+.||+|+||+||+|.... |+.||+|+-+...... |.-=.+++.+|+ --+.|..+..++...+..+
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 458899999999999999999877 9999999875543221 111112233331 1245666666667777889
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee----CCCCCCeEEEeeccccc
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN----QQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~----~~~~~~~kl~DFGla~~ 281 (489)
||+||.+.|+|.+++...+.+++..+..+..|++..++.||..+|||+||||+|+||.. +.....++|||||-|..
T Consensus 771 lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred eeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 99999999999999987788999999999999999999999999999999999999953 22355699999999964
Q ss_pred c---CCCCceee-eeeccC---------------CCCcchhHHHHHHHhcccccC
Q 040003 282 F---RPGLTFRV-WLRLHF---------------LFFQKQRQSVLQTRLVRNLNE 317 (489)
Q Consensus 282 ~---~~~~~~~~-~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~ 317 (489)
+ .++.++.. |-+..+ .|+|. ..++..++-|+|--
T Consensus 851 m~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGl--Aa~~h~mLFG~y~q 903 (974)
T KOG1166|consen 851 MKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGL--AATVHVMLFGKYME 903 (974)
T ss_pred eeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHH--HHHHHHHHHHHHHH
Confidence 4 45544443 211111 22232 45677777777744
No 426
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.76 E-value=1.9e-17 Score=162.20 Aligned_cols=149 Identities=36% Similarity=0.618 Sum_probs=129.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCC-CeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP-NVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~~~~~~~~~~~lv~ 208 (489)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+ .|+ +|+++++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEE
Confidence 678889999999999999987 78999999876554444567899999999999 566 8999999998888899999
Q ss_pred eecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
+|+.++++.+.+.... .+.......++.|++.++.|+|+.+++||||||+|||+ +... .+|++|||+++.+..
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecCC
Confidence 9999999997776654 78999999999999999999999999999999999999 5555 699999999986654
Q ss_pred C
Q 040003 285 G 285 (489)
Q Consensus 285 ~ 285 (489)
.
T Consensus 155 ~ 155 (384)
T COG0515 155 P 155 (384)
T ss_pred C
Confidence 3
No 427
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.75 E-value=2.1e-17 Score=154.92 Aligned_cols=139 Identities=19% Similarity=0.257 Sum_probs=104.7
Q ss_pred ceec-cCCceEEEEEEEcCCCcEEEEEEeecccC----------CCHHHHHHHHHHHHHHHHhcCCCCe--eEEEEEEEe
Q 040003 134 RKLG-QGQFGTTFLCVEKATQKEFACKSIAKRKL----------TTEEDVEDVRREIRIMHHLAGHPNV--IQIVGAYED 200 (489)
Q Consensus 134 ~~lG-~G~fg~Vy~~~~~~~~~~~avK~i~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpni--v~~~~~~~~ 200 (489)
..|| .||.|+||.+... +..+++|.+....+ .......++.+|++++.+| .|++| +..+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeee
Confidence 4577 7888888887653 67899998864321 1112345788999999999 67774 677776443
Q ss_pred C-C---eEEEEEeecCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 201 A-V---AVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 201 ~-~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
. . ..++||||++| .+|.+++.. ..+++. .+.+|+.++.+||++||+||||||+|||+ +.++.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE-APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEEE
Confidence 2 2 23599999997 688877644 455544 35689999999999999999999999999 5556899999
Q ss_pred eccccccC
Q 040003 276 FGLSMFFR 283 (489)
Q Consensus 276 FGla~~~~ 283 (489)
||.+....
T Consensus 186 fg~~~~~~ 193 (239)
T PRK01723 186 FDRGELRT 193 (239)
T ss_pred CCCcccCC
Confidence 99998865
No 428
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.74 E-value=1.9e-17 Score=146.09 Aligned_cols=142 Identities=29% Similarity=0.484 Sum_probs=118.2
Q ss_pred hccHHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcc-eehHHHHHHHHHhhhhhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT-MDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~-I~f~eF~~~~~~~~~~~~ 416 (489)
.++..++..|...|..+|.+ ++|+++.+||..+. .+..++ -..++++.+|.+++|. |+|++|+..+..+.....
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np---~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~ 101 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNP---LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKAS 101 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCc---HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCcc
Confidence 47889999999999999999 99999999999987 444444 3445667777888888 999999999987765544
Q ss_pred -HHHHHhhcccccccCCCcccHHHHHHHHHHcC---CC--HHH----HHHHHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 417 -EDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LD--DTQ----LEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 417 -~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~--~~~----~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
+++++.||+.||.|++|+|+.+||.+++..+- .+ ++. ++.+|.++|.|+||+|+|+||.+++.+.+..
T Consensus 102 ~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~ 179 (187)
T KOG0034|consen 102 KREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDL 179 (187)
T ss_pred HHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccH
Confidence 45999999999999999999999999997752 33 443 5667899999999999999999999877443
No 429
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.74 E-value=1.5e-17 Score=145.37 Aligned_cols=138 Identities=29% Similarity=0.401 Sum_probs=123.4
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC-CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAA 423 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~-~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~ 423 (489)
-..+...|...|.|..|+|+.+||+.+|..... ....+.+.-|+..+|.+.+|+|+|+||..++..++.+. .+
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr------~v 129 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWR------NV 129 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH------HH
Confidence 346778999999999999999999999987654 46788899999999999999999999999998776654 79
Q ss_pred cccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcccc
Q 040003 424 FSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488 (489)
Q Consensus 424 F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~f 488 (489)
|+.||+|++|.|+..||+.+|..+| ++++-++-+++++|.-++|.|.|++|+++|.....++++|
T Consensus 130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~F 196 (221)
T KOG0037|consen 130 FRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAF 196 (221)
T ss_pred HHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 7899999999999988899999999999998766655555
No 430
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.73 E-value=3.7e-17 Score=144.12 Aligned_cols=145 Identities=26% Similarity=0.396 Sum_probs=123.6
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..+++.++..+++-|.. ..++|.++.++|+.++...... -+....+.+|+.+|.|++|.|+|.||+.++........
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 46778888888888866 5678999999999999998864 34566788999999999999999999999998888888
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc----CC---------CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF----GL---------DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g~---------~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
++++..+|++||.|++|+|+.+|+..+++.+ |- ..+-++.+|+++|.|+||.|+++||+..+...+.
T Consensus 99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~ 178 (193)
T KOG0044|consen 99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPS 178 (193)
T ss_pred HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHH
Confidence 9999999999999999999999998887653 21 1345789999999999999999999998875543
Q ss_pred C
Q 040003 484 G 484 (489)
Q Consensus 484 ~ 484 (489)
.
T Consensus 179 i 179 (193)
T KOG0044|consen 179 I 179 (193)
T ss_pred H
Confidence 3
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.72 E-value=5.3e-17 Score=141.09 Aligned_cols=135 Identities=23% Similarity=0.285 Sum_probs=111.2
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-CCeeEEEEEEEeCCeEEEEEee
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-PNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~lv~e~ 210 (489)
+.+.||+|.++.||++.... ..+++|.+..... ...+.+|+.+++.+.++ .++++++.++...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35679999999999998754 6899998854321 35788999999999534 6899999998888899999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+.|+.+..+ +......+..++..++.++|.. +++|+||||+|||+ +..+.++++|||+++...
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~---~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV---DDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE---ECCcEEEEEecccccCCC
Confidence 998877543 4556677889999999999985 69999999999999 446789999999997654
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1.1e-17 Score=175.33 Aligned_cols=155 Identities=32% Similarity=0.498 Sum_probs=125.1
Q ss_pred cce-eecceeccCCceEEEEEEEcCCCcEEEEEEeecc--cCCCHHH-HHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMY-SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKR--KLTTEED-VEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y-~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~--~~~~~~~-~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.| .....+|.|++|.|+.+......+.++.|..+.+ ....... ...+..|+.+-..| .|||++..+..+.+...
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhccc
Confidence 335 4567899999999998888777777777765432 1122222 22366788888888 79999988887777666
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.+-+||||++ +|+.++...+.+...++.++++|++.||.|+|+.||.|||||++|+|+ ...+.+||+|||.+..+.
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASVFR 471 (601)
T ss_pred chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCcceeec
Confidence 6666999999 999999887889999999999999999999999999999999999999 677899999999998876
Q ss_pred CCCc
Q 040003 284 PGLT 287 (489)
Q Consensus 284 ~~~~ 287 (489)
-+-.
T Consensus 472 ~~~e 475 (601)
T KOG0590|consen 472 YPWE 475 (601)
T ss_pred cCcc
Confidence 5443
No 433
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.68 E-value=7.3e-16 Score=146.07 Aligned_cols=136 Identities=26% Similarity=0.460 Sum_probs=124.4
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
...++...+++.+|+.+|.+++|+++..+|...+.++... ...+-...+++.+|.|.||.+||+||...+. ..|
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E 81 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKE 81 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhH
Confidence 4556677789999999999999999999999999999876 6677788999999999999999999998775 457
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.++...|+.+|.|+||.|+.+|+.+.|+.+| +++++++.+++++|+|+++.|+++||.+.+.
T Consensus 82 ~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 82 LELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred HHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence 7889999999999999999999999999999 7899999999999999999999999998775
No 434
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.64 E-value=1.3e-17 Score=167.31 Aligned_cols=183 Identities=24% Similarity=0.344 Sum_probs=149.3
Q ss_pred eeccCCceEEEEEEE---cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 135 KLGQGQFGTTFLCVE---KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~---~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
.+|+|+||.|++++. ...+..+|+|+.++......... ....|-.++..+.+||.+|++...|+.....|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998653 34577899999887655443332 55678888888866999999999999999999999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce--e
Q 040003 212 AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF--R 289 (489)
Q Consensus 212 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~--~ 289 (489)
.||+|+..+.....+.+.....+...++-+++++|..+|+|||+|++||++ +.+|++|+.|||+++........ +
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~cgt 156 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIACGT 156 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhcccc
Confidence 999999999988889999999999999999999999999999999999999 89999999999999987554433 1
Q ss_pred e------e--------------------eeccCCCCcchhHHHHHHHhcccccCCCCCCCCC
Q 040003 290 V------W--------------------LRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDK 325 (489)
Q Consensus 290 ~------~--------------------~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 325 (489)
. + +++.-||.+ ++...|+..++.+|...|...
T Consensus 157 ~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a 214 (612)
T KOG0603|consen 157 YEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEA 214 (612)
T ss_pred hhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHH
Confidence 1 1 223335554 677777777888887777554
No 435
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.59 E-value=3e-14 Score=115.52 Aligned_cols=146 Identities=21% Similarity=0.377 Sum_probs=115.0
Q ss_pred hccHHHHHHHHHHHhhhcCC-----------CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTD-----------NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d-----------~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~ 407 (489)
-++..++-++...|..+.++ +.-.+..+. ..-|..+..++-.+.|-+.| ..||.|.++|++|+.+
T Consensus 21 FFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~-i~kMPELkenpfk~ri~e~F---SeDG~GnlsfddFlDm 96 (189)
T KOG0038|consen 21 FFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFEL-IEKMPELKENPFKRRICEVF---SEDGRGNLSFDDFLDM 96 (189)
T ss_pred cccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHH-HhhChhhhcChHHHHHHHHh---ccCCCCcccHHHHHHH
Confidence 46777888888888877554 122455544 44466666666666555555 4799999999999999
Q ss_pred HHHhhh-hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHH----HHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 408 MLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQL----EDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 408 ~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~----~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++.+.. ..++-++..||+.||-|+|++|..++|...+..+. ++++|+ +++++++|.|+||+|+|.||.+++.
T Consensus 97 fSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 97 FSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 876653 34566788999999999999999999999998774 888774 6789999999999999999999999
Q ss_pred hCCCCcccc
Q 040003 480 DSGLGKKVF 488 (489)
Q Consensus 480 ~~~~~~~~f 488 (489)
+++...+.|
T Consensus 177 raPDFlsTF 185 (189)
T KOG0038|consen 177 RAPDFLSTF 185 (189)
T ss_pred hCcchHhhh
Confidence 998888776
No 436
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.58 E-value=9.4e-16 Score=168.91 Aligned_cols=94 Identities=22% Similarity=0.289 Sum_probs=75.3
Q ss_pred CC-CCeeEEEEEE-------EeCCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 040003 187 GH-PNVIQIVGAY-------EDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKP 257 (489)
Q Consensus 187 ~h-pniv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp 257 (489)
.| +||++++++| .....++++|||+ +++|.++|... ..+++..+..+++||+.||.|||++|||||||||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP 108 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP 108 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence 35 5788888877 3334677889987 66999999653 4589999999999999999999999999999999
Q ss_pred CCEeeee----------------CCCCCCeEEEeeccccc
Q 040003 258 ENFLFIN----------------QQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 258 ~Nill~~----------------~~~~~~~kl~DFGla~~ 281 (489)
+||||.. .+..+.+||+|||+++.
T Consensus 109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~ 148 (793)
T PLN00181 109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR 148 (793)
T ss_pred hhEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence 9999942 12345678888888764
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.57 E-value=2e-14 Score=146.39 Aligned_cols=144 Identities=21% Similarity=0.225 Sum_probs=97.6
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC--------------------------H-HHH----------HHHH
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT--------------------------E-EDV----------EDVR 176 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~--------------------------~-~~~----------~~~~ 176 (489)
+.||.|++|.||+|+.+ +|+.||||+.+...... . .-. -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999865 78999999975431000 0 000 0245
Q ss_pred HHHHHHHHhc----CCCCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHH-HHHHHHHCCC
Q 040003 177 REIRIMHHLA----GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVG-VVEACHSLGV 250 (489)
Q Consensus 177 ~E~~~l~~l~----~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~-~l~~lH~~~i 250 (489)
+|++.+.++. ++++|.-..-++......+|||||++|++|.+..... .... ...+...++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 5666666653 2444332222223344579999999999998876432 1222 2334445544 4678899999
Q ss_pred eecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 251 iHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|+|+||+||++ +.++.++|+|||++..+.+
T Consensus 279 ~H~D~hPgNilv---~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 279 FHADLHPGNIFV---LKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eeCCCCcccEEE---CCCCcEEEEeCCCeeECCH
Confidence 999999999999 6678899999999987753
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.57 E-value=1.6e-15 Score=156.10 Aligned_cols=148 Identities=18% Similarity=0.248 Sum_probs=95.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--------------------------C-H----HHHHH----
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--------------------------T-E----EDVED---- 174 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--------------------------~-~----~~~~~---- 174 (489)
|+. +.||.|++|.||+|+.+.+|+.||||++++.... . . +..+.
T Consensus 122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 555 6899999999999999888999999999753100 0 0 11122
Q ss_pred --HHHHHHHHHHhc---CCCCeeEEEEEEE-eCCeEEEEEeecCCCchHHH--HHHcC----CCCHHHHHHHHHHHHHHH
Q 040003 175 --VRREIRIMHHLA---GHPNVIQIVGAYE-DAVAVHVVMELCAGGELFDR--IIQRG----HYTERKAADLTRIIVGVV 242 (489)
Q Consensus 175 --~~~E~~~l~~l~---~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~--l~~~~----~~~~~~~~~~~~~i~~~l 242 (489)
+.+|+..+.++. .+.+.+.+-..|. -....+||||||.|+.+.+. +...+ .+.+..+..++.|+
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi---- 276 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV---- 276 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH----
Confidence 344555555542 1333333333332 24567899999999999764 33333 13333334444444
Q ss_pred HHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeeccccccCCC
Q 040003 243 EACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 243 ~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla~~~~~~ 285 (489)
+..|++|+|+||+||++..++ ..+.++++|||++..+...
T Consensus 277 ---f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 ---FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ---HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 468999999999999994321 1238999999999888544
No 439
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.55 E-value=1e-13 Score=131.35 Aligned_cols=154 Identities=20% Similarity=0.275 Sum_probs=124.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-eC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-DA 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~ 201 (489)
.++++...+-+|.||.||.|.++... +.|-+|.++.. ..+-++..++.|.-.+..+ .|||+..+.+... +.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcC-cCCCccceeEEEeecc
Confidence 45788889999999999999766432 34556655432 3455667889999999998 6999999999875 45
Q ss_pred CeEEEEEeecCCCchHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
...++++.++.-|+|..+|... ..++..+...++.|+..|++|||.+||||.||-..|++| ++..++||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEe
Confidence 5678889999889999888621 235667788889999999999999999999999999999 77789999
Q ss_pred EeeccccccCCCCc
Q 040003 274 IDFGLSMFFRPGLT 287 (489)
Q Consensus 274 ~DFGla~~~~~~~~ 287 (489)
+|=.+++.+-+++.
T Consensus 438 tDsaLSRDLFP~DY 451 (563)
T KOG1024|consen 438 TDSALSRDLFPGDY 451 (563)
T ss_pred ccchhccccCcccc
Confidence 99999998776554
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.52 E-value=2.2e-13 Score=122.29 Aligned_cols=143 Identities=11% Similarity=0.106 Sum_probs=103.2
Q ss_pred ceeccCCceEEEEEEEcC------CCcEEEEEEeecccCC----------C---------HHHHHH----HHHHHHHHHH
Q 040003 134 RKLGQGQFGTTFLCVEKA------TQKEFACKSIAKRKLT----------T---------EEDVED----VRREIRIMHH 184 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~------~~~~~avK~i~~~~~~----------~---------~~~~~~----~~~E~~~l~~ 184 (489)
..||.|-=+.||.|.... .+..+|||+.+..... . ...... ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 3578999987532110 0 011222 3389999999
Q ss_pred hcCC-CCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEee
Q 040003 185 LAGH-PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-HSLGVMHRDLKPENFLF 262 (489)
Q Consensus 185 l~~h-pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l-H~~~iiHrDlKp~Nill 262 (489)
+... -++.+++++ ...+|||||+.+..+.....+...+++..+..+..+++.++..| |..||||+||++.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 9533 567777765 45689999997654433222333456667778889999999988 89999999999999999
Q ss_pred eeCCCCCCeEEEeeccccccCC
Q 040003 263 INQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 263 ~~~~~~~~~kl~DFGla~~~~~ 284 (489)
. ++.+.|+|||.|.....
T Consensus 159 ~----~~~v~iIDF~qav~~~h 176 (197)
T cd05146 159 H----DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred E----CCcEEEEECCCceeCCC
Confidence 3 35699999999876643
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.51 E-value=9e-14 Score=123.66 Aligned_cols=129 Identities=17% Similarity=0.146 Sum_probs=95.4
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.|+.|.++.||++... ++.|++|+...... ....+.+|+.+++.+.+...+.+++.+.. ...++||||++|
T Consensus 4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 56899999999998864 77899998754321 12345789999999843333456665543 345899999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV-----MHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-----iHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++... ......++.+++.+|..||..++ +|+|+||.||++. ++.++++|||.+..-
T Consensus 76 ~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~~ 137 (170)
T cd05151 76 SELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGMN 137 (170)
T ss_pred Cccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccCC
Confidence 887543 01123456789999999999985 9999999999993 456999999998754
No 442
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=4.2e-14 Score=134.39 Aligned_cols=95 Identities=32% Similarity=0.452 Sum_probs=77.3
Q ss_pred hcCCCCeeEEEEEEEe---------------------------CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHH
Q 040003 185 LAGHPNVIQIVGAYED---------------------------AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237 (489)
Q Consensus 185 l~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 237 (489)
|..|||||++.++|.+ ...+|+||.-+.. +|..++..+ ..+....+.++.|
T Consensus 272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQ 349 (598)
T ss_pred cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHH
Confidence 3479999999988853 3468999988854 898888654 4566778889999
Q ss_pred HHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEeeccccc
Q 040003 238 IVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDFGLSMF 281 (489)
Q Consensus 238 i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DFGla~~ 281 (489)
++.|+.|||.+||.|||+|.+|||+--+ |.--.+.|+|||.+--
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 9999999999999999999999999543 3445688999998753
No 443
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.43 E-value=6.3e-13 Score=125.72 Aligned_cols=188 Identities=23% Similarity=0.253 Sum_probs=117.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC---------CCCeeEEEEEE-
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG---------HPNVIQIVGAY- 198 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~---------hpniv~~~~~~- 198 (489)
.+..++.||.|+|+.||.+++..|++.+|+|+............+.+++|.-....+.+ |-.++-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 36678899999999999999999999999999876554445567778777754444311 21222222221
Q ss_pred --------EeC---C-----eEEEEEeecCCCchHHHHH---HcCCCC--H-HHH-HHHHHHHHHHHHHHHHCCCeecCC
Q 040003 199 --------EDA---V-----AVHVVMELCAGGELFDRII---QRGHYT--E-RKA-ADLTRIIVGVVEACHSLGVMHRDL 255 (489)
Q Consensus 199 --------~~~---~-----~~~lv~e~~~~g~L~~~l~---~~~~~~--~-~~~-~~~~~~i~~~l~~lH~~~iiHrDl 255 (489)
... . +.+++|+-+ .++|.+.+. ...... . ..+ ..+..|++..+++||+.||||+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 111 1 346778877 458877653 232221 1 122 345588999999999999999999
Q ss_pred CCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---------e-----------eeccCCCCcchhHHHHHHHhcccc
Q 040003 256 KPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---------W-----------LRLHFLFFQKQRQSVLQTRLVRNL 315 (489)
Q Consensus 256 Kp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~---------~-----------~~~~ypf~~~~~~~~~~~i~~~~~ 315 (489)
||+|+++ +.+|.++|+||+............. + ....+..+.+..+.++..|.++.+
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 9999999 7889999999987655432111000 0 011123455667889999999998
Q ss_pred cCCCC
Q 040003 316 NEPGS 320 (489)
Q Consensus 316 ~~~~~ 320 (489)
+|...
T Consensus 249 Pf~~~ 253 (288)
T PF14531_consen 249 PFGLS 253 (288)
T ss_dssp STCCC
T ss_pred CCCCC
Confidence 88743
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.43 E-value=4.7e-12 Score=109.12 Aligned_cols=153 Identities=18% Similarity=0.171 Sum_probs=113.2
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
....|-||+=+.|+++.+ .|+.+.||.=..+... ..-...+.++|+++|.++ .--.|.--.=+|.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEecCCCeE
Confidence 345788999999999875 5777777753332222 223346788999999998 34455444446777777889
Q ss_pred EEeecCC-CchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 207 VMELCAG-GELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 207 v~e~~~~-g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|||++| .++.+++.... .........++++|-..+.-||..+|||+||..+||+|..++....+-|+|||++....
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhccc
Confidence 9999977 47777776542 22333336889999999999999999999999999999877777778999999998765
Q ss_pred CCCc
Q 040003 284 PGLT 287 (489)
Q Consensus 284 ~~~~ 287 (489)
..+.
T Consensus 168 ~~ED 171 (229)
T KOG3087|consen 168 LPED 171 (229)
T ss_pred Cccc
Confidence 5444
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.43 E-value=5.4e-14 Score=148.38 Aligned_cols=111 Identities=34% Similarity=0.538 Sum_probs=83.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|..++.|-.|+||.||+++|+.+.+.+|+| +.+..+ +.|- |+... +.|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l--------ilRn--ilt~a-~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL--------ILRN--ILTFA-GNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch--------hhhc--ccccc-CCccee---------------
Confidence 34888999999999999999999999999994 444322 1111 33332 455555
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+-...++.-+.++..- +.+++|||+.||+|||+||+|+|+ ..-|++|+.|||+++..
T Consensus 136 ------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred ------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhh
Confidence 45555565555655433 778999999999999999999999 77899999999998753
No 446
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.40 E-value=1e-12 Score=121.81 Aligned_cols=139 Identities=20% Similarity=0.342 Sum_probs=114.0
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-------h--
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-------K-- 413 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-------~-- 413 (489)
+...++..+|..+|.+.+|+|+..||+.++..........+..+-+..+|.|.||.|+|+||+..+.... .
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 3567788999999999999999999999998776555667778888999999999999999999887531 0
Q ss_pred -hhhHHH----HHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 414 -IQREDH----MYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 414 -~~~~~~----l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.....+ =+..|+..|.|+||.++.+||..+|..-. |.+-.|.+-+..+|+|+||+|+++||+.-|.+.
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~ 229 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSH 229 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhc
Confidence 011112 24689999999999999999999985433 567788999999999999999999999777543
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=8.3e-12 Score=108.21 Aligned_cols=138 Identities=25% Similarity=0.244 Sum_probs=98.3
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+++|+=+.+|.+... |..+.+|.=.++....+ -...+..+|+.+|.++. --.|..-+=++.+.....|+||
T Consensus 3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEEE
Confidence 5789999999998553 34466664322222221 22356779999999983 3344444444556677889999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|++|-.|.+.+... ...+++.+-..+.-||..||||+||.++||++.+ +.+.++||||+.+-....
T Consensus 80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~----~~i~~IDfGLg~~s~~~E 145 (204)
T COG3642 80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSG----GRIYFIDFGLGEFSDEVE 145 (204)
T ss_pred EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeC----CcEEEEECCcccccccHH
Confidence 99998888887654 2456677777778899999999999999999942 349999999998654433
No 448
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.36 E-value=2.1e-13 Score=144.20 Aligned_cols=144 Identities=20% Similarity=0.235 Sum_probs=115.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeeccc-CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK-LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~-~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.|...+.||.+.|=+|.+|.+.+ | .|+||++.+.. ...-....+...|++ ... .+|||++.+.-+.......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l-~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FAL-MKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHh-hcCCcccchHHHHHhhHHHHHH
Confidence 37778899999999999998764 3 49999987654 222233344455666 333 3899999988777777888999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
-+|..+ +|+|+|..+.-+...+.+.|+.|++.||.-||..||+|+|||.+|||++ .-.-+.|+||..-+
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFK 168 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccC
Confidence 999865 9999998877778888899999999999999999999999999999994 44458899997654
No 449
>PLN02964 phosphatidylserine decarboxylase
Probab=99.36 E-value=4.6e-12 Score=131.54 Aligned_cols=105 Identities=18% Similarity=0.294 Sum_probs=94.7
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHH---HHHHHHccCCCCCcceehHHHHHHHHHhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSE---IDGLMQAGDIDNSGTMDYGEFIAAMLHLNK 413 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~---i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~ 413 (489)
..++..++.+++++|+.+|.|++|.+ |..+++.+| ..+++.+ ++.+|+.+|.|++|.|+|+||+.++..+..
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 35677888999999999999999997 888899999 5888877 899999999999999999999999876655
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
...++++.++|+.||+|++|+|+.+||+.+|..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 566788999999999999999999999999987
No 450
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.33 E-value=1.8e-12 Score=100.50 Aligned_cols=63 Identities=22% Similarity=0.459 Sum_probs=58.7
Q ss_pred HHHHhhcccccc-cCCCcccHHHHHHHHHH-cC--CCH-HHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDK-DGSGYITPDELQTACQQ-FG--LDD-TQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~-d~~G~I~~~El~~~l~~-~g--~~~-~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|+.||+ +++|+|+.+||+.+|+. +| +++ +++++||+.+|.|+||+|+|+||+.+|..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 457899999999 99999999999999998 87 777 89999999999999999999999999975
No 451
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.28 E-value=9.3e-12 Score=91.97 Aligned_cols=60 Identities=45% Similarity=0.856 Sum_probs=52.9
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcCC--CH----HHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFGL--DD----TQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~--~~----~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+++++|+.+|+|++|+|+.+||+.+++.++. ++ +.++.+++.+|.|+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 3678999999999999999999999999883 34 456667999999999999999999886
No 452
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.27 E-value=1.4e-11 Score=114.38 Aligned_cols=133 Identities=26% Similarity=0.352 Sum_probs=104.0
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhh--hH---
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQ--RE--- 417 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~--~~--- 417 (489)
.+.+-...|+.-|.|++|.++.+||...|.--- ..+..--|..-+..+|.|+||.|+++||+.-|....... .+
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~ 240 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVL 240 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccccc
Confidence 445557789999999999999999988773322 234445567788999999999999999999987643211 10
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCceeHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGL--DDTQLEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~--~~~~~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
-+-.+.|...|+|+||+++.+|++.++..-+. ...++..++-+.|.|+||++|++|.+.
T Consensus 241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred ccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 11225566679999999999999999866554 577888999999999999999999774
No 453
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.26 E-value=3.2e-11 Score=112.05 Aligned_cols=145 Identities=27% Similarity=0.386 Sum_probs=100.1
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC---CeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-HPNVIQIVGAYEDA---VAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~---~~~~lv~e 209 (489)
+.||.|.++.||++.... |+.+++|........ .....+.+|+++++.+.. +.++.+++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 468999999999998643 578999987543221 123567899999999943 24567777776654 36789999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS------------------------------------------ 247 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~------------------------------------------ 247 (489)
|++|.++.+.+.. ..++......++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999887654321 234455555555555555555552
Q ss_pred --------------CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 248 --------------LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 248 --------------~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
..++|+|++|.|||+... ..+.+.|+||+.+..-.
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccccCC
Confidence 246999999999999431 14568999999887543
No 454
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.18 E-value=1.3e-10 Score=101.14 Aligned_cols=102 Identities=25% Similarity=0.359 Sum_probs=91.8
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCC-------CHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL-------DDTQL 454 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-------~~~~~ 454 (489)
.++..+|+.+|.|++|.|+-.|+-.++..+.....+.++..+++.+|.|++|.|+.+||..++...+. +.+++
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el 87 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEEL 87 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHH
Confidence 56788999999999999999999999987776677889999999999999999999999999987652 24589
Q ss_pred HHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 455 EDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 455 ~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
.++|+.+|.|+||.|+.+|+..+|...+.
T Consensus 88 ~eaF~~fD~d~~G~Is~~el~~~l~~lg~ 116 (151)
T KOG0027|consen 88 KEAFRVFDKDGDGFISASELKKVLTSLGE 116 (151)
T ss_pred HHHHHHHccCCCCcCcHHHHHHHHHHhCC
Confidence 99999999999999999999999987754
No 455
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.17 E-value=5.8e-11 Score=92.35 Aligned_cols=63 Identities=19% Similarity=0.467 Sum_probs=57.4
Q ss_pred HHHHhhccccc-ccCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFD-KDGSG-YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.++|+.|| +|++| +|+.+||+.+|+. +| .++++++++++.+|.|+||+|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45789999998 89999 5999999999998 77 57889999999999999999999999998864
No 456
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=1e-10 Score=118.05 Aligned_cols=157 Identities=22% Similarity=0.305 Sum_probs=128.8
Q ss_pred Ccccceeecceecc--CCceEEEEEEE--cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 125 NLKEMYSLGRKLGQ--GQFGTTFLCVE--KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~--G~fg~Vy~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
.+...+.+...+|. |.+|.||.+.. ..++..+|+|.-+. .........+=.+|+...+.+..|+|.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~-p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKI-PFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccC-CCCCccccccccchhhcccccCccccccccCccccc
Confidence 34455777888999 99999999988 88899999997322 222223334445788888888789999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCC-CCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEE
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVG----VVEACHSLGVMHRDLKPENFLFINQQEE-APLKTI 274 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~----~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~ 274 (489)
.+..|+-+|+|. .+|..+...... ++...++..+.+... ||.++|+.+|+|-|+||+||++ ..+ ...+++
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~---~~~~~s~~~~ 265 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT---TSDWTSCKLT 265 (524)
T ss_pred CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec---ccccceeecC
Confidence 999999999994 688777765544 888899999999999 9999999999999999999999 445 789999
Q ss_pred eeccccccCCCC
Q 040003 275 DFGLSMFFRPGL 286 (489)
Q Consensus 275 DFGla~~~~~~~ 286 (489)
|||+...+.++.
T Consensus 266 df~~v~~i~~~~ 277 (524)
T KOG0601|consen 266 DFGLVSKISDGN 277 (524)
T ss_pred CcceeEEccCCc
Confidence 999999887665
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=2.3e-12 Score=135.52 Aligned_cols=151 Identities=27% Similarity=0.462 Sum_probs=125.8
Q ss_pred eeecceeccCCceEEEEEEEc-CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK-ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
|.+.+.||+|+|+.|-.+... .....+|+|.+.... ........+..|..+-+.+.+|.|++++++...+....++++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 777888999999999887653 344567777765443 233445566778888888856999999999999999999999
Q ss_pred eecCCCchHHHH-HHcC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRI-IQRG-HYTERKAADLTRIIVGVVEACH-SLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l-~~~~-~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
+|..|+++++.+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.++ +..+ .+|++|||+|..+..
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLATAYRN 177 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhhccccc
Confidence 999999999988 4444 5778888999999999999999 9999999999999999 5566 899999999998876
No 458
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.13 E-value=5e-10 Score=107.24 Aligned_cols=131 Identities=23% Similarity=0.442 Sum_probs=104.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHh-CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---h---------
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRV-GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---K--------- 413 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~l-g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~--------- 413 (489)
.+...|+.+|.+.+|+|+...+..++..+ |.+++..-+..-+ +..+.||.+.|.+.+..+..-. .
T Consensus 465 dL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kl--a~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 465 DLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKL--ANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred HHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhc--cCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 56678999999999999999999988764 6677666554323 3345677999998877653210 0
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
......+..+|+.+|+|++|.|+.+||+.+++-++ ++++++.++.+.+|.|+||+|++.||..+++
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 01124577899999999999999999999997764 7899999999999999999999999999986
No 459
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.11 E-value=3.3e-09 Score=100.66 Aligned_cols=137 Identities=21% Similarity=0.164 Sum_probs=93.8
Q ss_pred EEEEEEEcCCCcEEEEEEeecccCCC--------HHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEe-----CCeEEEEE
Q 040003 143 TTFLCVEKATQKEFACKSIAKRKLTT--------EEDVEDVRREIRIMHHLAG-HPNVIQIVGAYED-----AVAVHVVM 208 (489)
Q Consensus 143 ~Vy~~~~~~~~~~~avK~i~~~~~~~--------~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~-----~~~~~lv~ 208 (489)
.|+++.. .|+.|.||......... ......+.+|...+.+|.. .-.++.++.+++. ....+|||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3555433 46678888653221100 0011246789998888831 1223444555543 23578999
Q ss_pred eecCCC-chHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC----CCCCCeEEEeeccccc
Q 040003 209 ELCAGG-ELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ----QEEAPLKTIDFGLSMF 281 (489)
Q Consensus 209 e~~~~g-~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~----~~~~~~kl~DFGla~~ 281 (489)
|++++. +|.+++.. ...........++.++...+.-||..||+|+|++++|||+..+ +....+.||||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999886 78887753 2345666778899999999999999999999999999999531 2356799999998864
No 460
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.09 E-value=3.3e-10 Score=87.92 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhhcC-CCCCCccHHHHHHHHHH-hCCCCCH-HHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDT-DNSGYITLEELKKGLQR-VGANLMD-SEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~-d~~g~i~~~el~~~l~~-lg~~~~~-~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..|..+|+.+|. +++|+|+..||+.+|.. +|..++. .+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 456788999999999 99999999999999999 8877777 899999999999999999999999988654
No 461
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.09 E-value=8.7e-10 Score=98.71 Aligned_cols=132 Identities=20% Similarity=0.198 Sum_probs=82.4
Q ss_pred EEEEEEEcCCCcEEEEEEeecccCC-----------------------CHHHHHHHHHHHHHHHHhcCC-CCeeEEEEEE
Q 040003 143 TTFLCVEKATQKEFACKSIAKRKLT-----------------------TEEDVEDVRREIRIMHHLAGH-PNVIQIVGAY 198 (489)
Q Consensus 143 ~Vy~~~~~~~~~~~avK~i~~~~~~-----------------------~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~ 198 (489)
.||.|.. ..|..+|+|+.+..... .........+|.+.|.++... -++.+++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888886 46779999987542110 011234678999999999433 3677777553
Q ss_pred EeCCeEEEEEeecC--CCchHHHHHHcCCCCHHHHHHHHHHHHHHHH-HHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 199 EDAVAVHVVMELCA--GGELFDRIIQRGHYTERKAADLTRIIVGVVE-ACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 199 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~-~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..+|||||++ |..+.. +... .+.......++.+++..+. .+|..||||+||.+.|||+. .+ .+.|+|
T Consensus 80 ----~~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~---~~-~~~iID 149 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD---DG-KVYIID 149 (188)
T ss_dssp ----TTEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE---TT-CEEE--
T ss_pred ----CCEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee---cc-eEEEEe
Confidence 3469999998 655543 3332 1224455667777777444 46899999999999999993 33 799999
Q ss_pred eccccccCCC
Q 040003 276 FGLSMFFRPG 285 (489)
Q Consensus 276 FGla~~~~~~ 285 (489)
||.|.....+
T Consensus 150 f~qav~~~~p 159 (188)
T PF01163_consen 150 FGQAVDSSHP 159 (188)
T ss_dssp GTTEEETTST
T ss_pred cCcceecCCc
Confidence 9998776543
No 462
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.09 E-value=2.1e-10 Score=90.54 Aligned_cols=64 Identities=23% Similarity=0.523 Sum_probs=55.5
Q ss_pred HHHHhhccccc-ccCCC-cccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYFD-KDGSG-YITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+..+|+.|| +|++| +|+.+||+.++.. ++ .++.++++|++++|.|+||.|+|+||+.+|...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45678899998 89999 5999999999976 22 367899999999999999999999999999753
No 463
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=99.08 E-value=2.4e-10 Score=84.60 Aligned_cols=60 Identities=33% Similarity=0.480 Sum_probs=56.6
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+|+.+|.|++|.|+.+|++.++..+|++++++.++++.+|.+++|.|+|+||+.+|..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999998864
No 464
>PTZ00183 centrin; Provisional
Probab=99.06 E-value=9.4e-10 Score=96.48 Aligned_cols=101 Identities=26% Similarity=0.331 Sum_probs=85.5
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---CCCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g~~~~~~~~~~ 458 (489)
.++..+|..+|.+++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++... .....++..+|
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 456778999999999999999998888654333345678899999999999999999999887653 24567899999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+.+|.|++|.|+++||..++...+
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~~~ 120 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKELG 120 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhC
Confidence 999999999999999999998654
No 465
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=99.06 E-value=3.6e-10 Score=90.07 Aligned_cols=64 Identities=30% Similarity=0.390 Sum_probs=59.8
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...+..+|+.||.|++|.|+.+||+.+++..|++++++++|+..+|.+++|.|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999998853
No 466
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.06 E-value=4.4e-10 Score=82.93 Aligned_cols=62 Identities=39% Similarity=0.712 Sum_probs=53.1
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHH----HHHHHHHccCCCCCcceehHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDS----EIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~----~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
+|+++|+.+|.|++|+|+.+||..++..++...... .+..+|+.+|.|++|.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 478899999999999999999999999998765444 45556999999999999999998764
No 467
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=99.05 E-value=4e-10 Score=87.63 Aligned_cols=63 Identities=21% Similarity=0.552 Sum_probs=56.6
Q ss_pred HHHhhcccccc-cC-CCcccHHHHHHHHHH---cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 419 HMYAAFSYFDK-DG-SGYITPDELQTACQQ---FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 419 ~l~~~F~~~D~-d~-~G~I~~~El~~~l~~---~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+..+|..||. |+ +|+|+.+||+.+|+. +| +++++++++++.+|.|++|+|+|+||+.+|.+.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 46689999998 77 899999999999963 56 689999999999999999999999999999764
No 468
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.04 E-value=4.4e-09 Score=92.61 Aligned_cols=121 Identities=27% Similarity=0.437 Sum_probs=88.0
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccc
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYF 427 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~ 427 (489)
++-+-.+||.+.+|+|..+||+.+...+ ..+..+|+.+|.|++|+|+..|+..++..+--..+.+-+..+++.|
T Consensus 96 crlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~ky 169 (221)
T KOG0037|consen 96 CRLMISMFDRDNSGTIGFKEFKALWKYI------NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKY 169 (221)
T ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHh
Confidence 3444566788888888888888777664 4677888888888888888888888776554444556666777888
Q ss_pred cccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCC--ceeHHHHHHHH
Q 040003 428 DKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG--RIDYSEFVAMM 478 (489)
Q Consensus 428 D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG--~I~~~eF~~~~ 478 (489)
|.-++|.|..++|.++|..+ ..+-+.|++.|++.+| +|+|++|+.+.
T Consensus 170 d~~~~g~i~FD~FI~ccv~L----~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 170 DRFGGGRIDFDDFIQCCVVL----QRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ccccCCceeHHHHHHHHHHH----HHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 87778888888888877543 2455677778887777 56788888664
No 469
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=1.3e-10 Score=117.32 Aligned_cols=151 Identities=23% Similarity=0.248 Sum_probs=124.9
Q ss_pred cceeecceeccCCceEEEEEEEc-CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..|..+..||.|.|+.|+.+..+ .++..|++|.+.+.......+ ..-..|+-+...+..|.++++++..|....+.||
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 45778889999999999998755 678899999876544333322 3334688888888789999999999988889999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
-.|||+++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++.+++ +..++.|||++..
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTR 416 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccc
Confidence 999999998877765556688889999999999999999999999999999999996533 7789999999875
No 470
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=99.02 E-value=4.6e-10 Score=88.67 Aligned_cols=64 Identities=25% Similarity=0.554 Sum_probs=57.3
Q ss_pred HHHHHhhccccc-ccCCC-cccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGSG-YITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++++|+.|| +|++| .|+.+||+.+|+. +| .++++++++|+.+|.|++|.|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467889999997 99999 5999999999975 54 36889999999999999999999999999875
No 471
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=99.02 E-value=3.9e-10 Score=89.46 Aligned_cols=67 Identities=21% Similarity=0.550 Sum_probs=58.5
Q ss_pred HHHHHhhcccccc-cC-CCcccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 417 EDHMYAAFSYFDK-DG-SGYITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 417 ~~~l~~~F~~~D~-d~-~G~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
...++.+|+.||. |+ +|+|+.+||+.+|+. +| +++++++.+++.+|.|++|.|+|+||+.+|...++
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 4568899999997 97 799999999999975 33 57899999999999999999999999999976543
No 472
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.00 E-value=4.7e-11 Score=118.31 Aligned_cols=78 Identities=32% Similarity=0.450 Sum_probs=65.7
Q ss_pred eEEEEEeecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
++||.|++|...+|.++|..+. ..+......++.|+..+++| +|.+|||+||.||.+ ..+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccchhhhhhhhhhe
Confidence 5789999999999999997543 34556778899999999999 999999999999999 44557999999999
Q ss_pred cccCCCC
Q 040003 280 MFFRPGL 286 (489)
Q Consensus 280 ~~~~~~~ 286 (489)
.......
T Consensus 404 ts~~~~~ 410 (516)
T KOG1033|consen 404 TSQDKDE 410 (516)
T ss_pred eecccCC
Confidence 8776554
No 473
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=99.00 E-value=8.3e-10 Score=85.97 Aligned_cols=64 Identities=22% Similarity=0.460 Sum_probs=56.1
Q ss_pred HHHHhhccc-ccccCCC-cccHHHHHHHHHHc-------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSY-FDKDGSG-YITPDELQTACQQF-------GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~-~D~d~~G-~I~~~El~~~l~~~-------g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+..+|+. +|+|++| +|+.+||+.++... ..++.+++++++.+|.|+||+|+|+||+.+|...
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 457789999 7898986 99999999999775 2567899999999999999999999999998753
No 474
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.00 E-value=1.6e-09 Score=95.86 Aligned_cols=101 Identities=19% Similarity=0.326 Sum_probs=84.7
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh-----------h
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK-----------I 414 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~-----------~ 414 (489)
.-...+|..+|.|++|.|+..||..+|..+.....++.+...|+.+|.|++|.|+++|++..+..+.. .
T Consensus 64 ~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~ 143 (193)
T KOG0044|consen 64 KYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEE 143 (193)
T ss_pred HHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccc
Confidence 34467899999999999999999999988876667778888999999999999999999887754321 1
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
..++....+|+.+|.|+||.||.+||...+..
T Consensus 144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 23567789999999999999999999887654
No 475
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.00 E-value=2e-09 Score=83.66 Aligned_cols=69 Identities=20% Similarity=0.342 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMID-TDNSG-YITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..++++|+.+| .|++| .|+.+||+.+|+. +|...++.+++.+++.+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45678999999998 79999 5999999999999 8988999999999999999999999999999887643
No 476
>PTZ00184 calmodulin; Provisional
Probab=99.00 E-value=3e-09 Score=92.12 Aligned_cols=102 Identities=23% Similarity=0.286 Sum_probs=84.9
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
+++...|..+|.+++|.|+++||..++.........+.+..+|+.+|.|++|.|+.+||..++.... ...+.+..+|
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 3456788899999999999999998876544333456788999999999999999999999886542 3456788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~ 115 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTNLGE 115 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHHHCC
Confidence 9999999999999999999976543
No 477
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.96 E-value=1.5e-08 Score=93.01 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC----CeEEEEEeecCCC-chHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 040003 172 VEDVRREIRIMHHLAG-HPNVIQIVGAYEDA----VAVHVVMELCAGG-ELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245 (489)
Q Consensus 172 ~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l 245 (489)
..+..+|...+..|.. .=.+.+.+++.+.. ...+||+|++++. +|.+++......+......++.++...+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3467788888888732 22355666666543 2468999999884 7888887644567777889999999999999
Q ss_pred HHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 246 H~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|.+||+|+|+++.|||+..++....+.|+||+-++...
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999999999999999655444589999999887654
No 478
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.95 E-value=3.7e-09 Score=88.11 Aligned_cols=101 Identities=24% Similarity=0.379 Sum_probs=86.0
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHH-cC--CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ-FG--LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~ 458 (489)
++++.-|..+|.+++|.|+++|+-.++..+.-....+++..+..-+|+++.|.|+.++|+.++.. +| -+.+++..+|
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~af 112 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAF 112 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHH
Confidence 57888999999999999999999777765543344566777888889999999999999998743 33 4789999999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+.+|.|++|+||+.+|+.++.+.|
T Consensus 113 rl~D~D~~Gkis~~~lkrvakeLg 136 (172)
T KOG0028|consen 113 RLFDDDKTGKISQRNLKRVAKELG 136 (172)
T ss_pred HcccccCCCCcCHHHHHHHHHHhC
Confidence 999999999999999999998765
No 479
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.94 E-value=6.4e-09 Score=88.84 Aligned_cols=101 Identities=22% Similarity=0.262 Sum_probs=87.9
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
+++.+.|..+|.|++|.|+++|+..++..+.....+..+..+|..+|. +.|.|+..+|..+|...- -+.+++..+|
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF 98 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAF 98 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 346778899999999999999999998766666677888899999999 999999999999986542 4589999999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|+||+|++.|+..++...+.
T Consensus 99 ~~fD~d~dG~Is~~eL~~vl~~lge 123 (160)
T COG5126 99 KLFDKDHDGYISIGELRRVLKSLGE 123 (160)
T ss_pred HHhCCCCCceecHHHHHHHHHhhcc
Confidence 9999999999999999999986543
No 480
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.93 E-value=4.7e-09 Score=83.62 Aligned_cols=72 Identities=29% Similarity=0.455 Sum_probs=65.2
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
.++.+++..++.+|..+|.|++|.|+.+||+.+|+.++ +++.++..++..+|.+++|.|+|+||+.++....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 36778999999999999999999999999999999976 5788999999999999999999999999886543
No 481
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.93 E-value=3.1e-07 Score=91.35 Aligned_cols=140 Identities=12% Similarity=0.164 Sum_probs=108.5
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE----eCCeEEEEEeecCC-C
Q 040003 140 QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----DAVAVHVVMELCAG-G 214 (489)
Q Consensus 140 ~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~~~lv~e~~~~-g 214 (489)
--.+.|+|+...+|..|++|++.-.+.... .....=++.++++ .|+|||.+.++|. ....+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 345789999999999999999943322221 1222346778899 7999999999886 34578999999987 5
Q ss_pred chHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 215 ELFDRIIQR---------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 215 ~L~~~l~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
+|.++.... .+.+|..+|.++.|+..||.++|+.|+.-+-|-|.+||+ +.+.+++|.-.|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEecccce
Confidence 787765321 236788999999999999999999999999999999999 55557888888877
Q ss_pred cccCCCC
Q 040003 280 MFFRPGL 286 (489)
Q Consensus 280 ~~~~~~~ 286 (489)
-.+....
T Consensus 441 Dvl~~d~ 447 (655)
T KOG3741|consen 441 DVLQEDP 447 (655)
T ss_pred eeecCCC
Confidence 6665444
No 482
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.91 E-value=4.6e-09 Score=73.97 Aligned_cols=50 Identities=38% Similarity=0.738 Sum_probs=46.3
Q ss_pred CCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 431 GSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 431 ~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++|.|+.+||+.+|..+| ++++++..++..+|.|++|.|+|+||+.+|.+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 479999999999998765 78999999999999999999999999999975
No 483
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.91 E-value=2.5e-09 Score=87.26 Aligned_cols=63 Identities=19% Similarity=0.297 Sum_probs=55.9
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....+..+|..+|.|+||+|+.+||..++ ++..+..+..+|+.+|.|+||.||++||..++.+
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 34678899999999999999999999877 5555778899999999999999999999999853
No 484
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.88 E-value=1.2e-07 Score=97.06 Aligned_cols=170 Identities=14% Similarity=0.093 Sum_probs=124.6
Q ss_pred eeecceeccCCceEEE-EEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTF-LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy-~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
|.+ ...+-++.+ || .|..+.++..|.|.+++.... ...+...+-++-|+.| +||||+++++.++..+.+|||.
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEe
Confidence 555 334444444 34 466778889999998865432 3445677788889999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH-SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|-+. -|..++.+.+ ...+..-+.||+.||.||| ..+++|++|--+.|++ +..|.-||++|-++.....-..
T Consensus 89 ErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~ 160 (690)
T KOG1243|consen 89 ERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNA 160 (690)
T ss_pred eccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCc
Confidence 9985 5666776544 6667777899999999997 6789999999999999 7889999999988765432221
Q ss_pred --eeeeeeccC--CC---------CcchhHHHHHHHhcc
Q 040003 288 --FRVWLRLHF--LF---------FQKQRQSVLQTRLVR 313 (489)
Q Consensus 288 --~~~~~~~~y--pf---------~~~~~~~~~~~i~~~ 313 (489)
...++...| |+ +....++++.+++.|
T Consensus 161 ~~~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 PAKSLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccccchhhhcccChhhcCccccchhhhhHHHHHHHHhCc
Confidence 111111122 33 334457888899888
No 485
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.88 E-value=1.2e-08 Score=80.84 Aligned_cols=69 Identities=20% Similarity=0.347 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhhcC-CC-CCCccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 344 EIAGLKEMFKMIDT-DN-SGYITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 344 ~~~~l~~~F~~~D~-d~-~g~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
....++.+|..+|. |+ +|+|+..||+.+|+. +|..+++.++..+++.+|.+++|.|+|+||+.++....
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 45678999999997 97 799999999999986 56678899999999999999999999999998886543
No 486
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.87 E-value=2.8e-08 Score=88.61 Aligned_cols=95 Identities=17% Similarity=0.015 Sum_probs=71.0
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 214 GELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 214 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
|+|.+++..+ +.+++..++.++.|++.||.|||+++ ||+|||+ +.++.+|+ ||+++..........
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~~~g~~~ 69 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQSRVDPY 69 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccccCCCccc
Confidence 6899999764 45999999999999999999999998 9999999 67788998 999987654322111
Q ss_pred ------eeeccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 291 ------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+....| .-+-++.+.++.+++.|..+|..
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 111122 12234568888999988887753
No 487
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.87 E-value=5.5e-09 Score=81.83 Aligned_cols=65 Identities=18% Similarity=0.496 Sum_probs=57.5
Q ss_pred HHHHHhhcccccc--cCCCcccHHHHHHHHHH-cC--C----CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDK--DGSGYITPDELQTACQQ-FG--L----DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~--d~~G~I~~~El~~~l~~-~g--~----~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+.++.+|..||+ |++|.|+.+||..+++. +| + +..+++.|+..+|.|++|.|+|+||+.+|...
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4568889999999 89999999999999975 44 3 48899999999999999999999999998753
No 488
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.86 E-value=1.8e-08 Score=92.86 Aligned_cols=140 Identities=20% Similarity=0.277 Sum_probs=101.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----------------C--HHHHHHHHHHHHHHHHhcCC-C
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----------------T--EEDVEDVRREIRIMHHLAGH-P 189 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----------------~--~~~~~~~~~E~~~l~~l~~h-p 189 (489)
+.++.+||-|-=|.||.|.+. .|..+|||.=+..... + ...+....+|.++|..|..+ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999875 6889999974321100 0 12234567899999999433 3
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
.|.+.+++ +...+||||++|-.|... ++.......++..|+.-+.-+-..||||+|+.+=|||+ +++|
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg 239 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDG 239 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCC
Confidence 57776654 456799999998766432 22355566666777776666668999999999999999 7788
Q ss_pred CeEEEeecccccc
Q 040003 270 PLKTIDFGLSMFF 282 (489)
Q Consensus 270 ~~kl~DFGla~~~ 282 (489)
.+.++||--+...
T Consensus 240 ~~~vIDwPQ~v~~ 252 (304)
T COG0478 240 DIVVIDWPQAVPI 252 (304)
T ss_pred CEEEEeCcccccC
Confidence 8999999655443
No 489
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.84 E-value=1.4e-08 Score=80.07 Aligned_cols=69 Identities=22% Similarity=0.321 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMID-TDNSG-YITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+.++|+.+| .|++| +|+..||+.+|... ....++.+++++++.+|.|++|.|+|+||+.++..+
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45677889999999 78998 59999999999763 334577899999999999999999999999988654
No 490
>PLN02964 phosphatidylserine decarboxylase
Probab=98.84 E-value=8.4e-09 Score=107.50 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=78.4
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHH---HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED---HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~ 456 (489)
+++.+.|..+|.|++|.+ +...+..+.. ....++ .+..+|+.+|.|++|.|+.+||..++..++ .+++++.+
T Consensus 143 ~elkeaF~lfD~dgdG~i-Lg~ilrslG~--~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~e 219 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV-VGSIFVSCSI--EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEE 219 (644)
T ss_pred HHHHHHHHHHCCCCCCcC-HHHHHHHhCC--CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHH
Confidence 567788999999999997 3333333211 112222 378999999999999999999999999887 67889999
Q ss_pred HHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 457 IIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 457 ~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+|+.+|.|++|.|+++||..+|...
T Consensus 220 aFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 220 LFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 9999999999999999999999863
No 491
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.81 E-value=2.2e-08 Score=77.86 Aligned_cols=70 Identities=24% Similarity=0.436 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhhcC-CC-CCCccHHHHHHHHHH---hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDT-DN-SGYITLEELKKGLQR---VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~-d~-~g~i~~~el~~~l~~---lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++.+..+-.+|..+|. |+ +|+|+.+||+.+|+. +|...+++++.++++.+|.|++|.|+|+||+..+..+
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 3456677889999998 67 899999999999973 6888999999999999999999999999999888654
No 492
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.81 E-value=2.3e-08 Score=78.97 Aligned_cols=68 Identities=24% Similarity=0.383 Sum_probs=59.4
Q ss_pred HHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-hC----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMID-TDNSG-YITLEELKKGLQR-VG----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 344 ~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~-lg----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
-+..++++|+.+| .+++| .|+..||+.+|+. +| ..+++.+++.+++.+|.|++|.|+|+||+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4567899999997 99999 4999999999986 54 34688999999999999999999999999888654
No 493
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.77 E-value=2.9e-08 Score=77.71 Aligned_cols=70 Identities=21% Similarity=0.382 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHH-hCCC----CCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQR-VGAN----LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~--d~~g~i~~~el~~~l~~-lg~~----~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++++..++.+|..+|. |++|+|+.+||..+++. +|.. .+..++..++..+|.+++|.|+|+||+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4577889999999999 89999999999999986 5543 358999999999999999999999999888643
No 494
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.77 E-value=2.2e-08 Score=73.95 Aligned_cols=61 Identities=28% Similarity=0.456 Sum_probs=55.6
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
+++|+.+|.|++|+|+.+||+.++..+|. +..++..+++.+|.+++|.|+|+||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 57899999999999999999999999875 78889999999999999999999999888643
No 495
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.72 E-value=8.8e-08 Score=103.63 Aligned_cols=135 Identities=24% Similarity=0.467 Sum_probs=111.8
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC--CH-----HHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL--MD-----SEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~--~~-----~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.++++.+.++.-+|+.||.+.+|+++..+|+.+|+.+|+++ .+ .++++++..+|.+.+|+|+..+|+..|...
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence 56889999999999999999999999999999999999876 23 379999999999999999999999999764
Q ss_pred h--hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHH----hcC----CCCCceeHHHHHHHHH
Q 040003 412 N--KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIRE----VDQ----DNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 412 ~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~----~d~----d~dG~I~~~eF~~~~~ 479 (489)
. ...+.+.+..||+.+|. +.-+|+++++.. .++.++++-.+.+ +|+ .-.+.+.|.+|++.+.
T Consensus 2326 ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~-----~ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2326 ETENILSSEEIEDAFRALDA-GKPYVTKEELYQ-----NLTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred ccccccchHHHHHHHHHhhc-CCccccHHHHHh-----cCCHHHHHHHHHHhhhhcccccCCCccccccHHHHHHHHh
Confidence 3 33445689999999998 899999999966 4667776655444 444 2345799999998763
No 496
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.72 E-value=9.4e-08 Score=92.99 Aligned_cols=134 Identities=25% Similarity=0.363 Sum_probs=102.8
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHc----cCCCCCcceehHHHHHHHHHhhhhh
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQA----GDIDNSGTMDYGEFIAAMLHLNKIQ 415 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~----~D~d~~g~I~f~eF~~~~~~~~~~~ 415 (489)
++-+.-..+.-.|-.+|.|++|.|+.++|+..- ....+..-++++|+. .-.-.+|+|+|++|+..+.......
T Consensus 272 FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~---d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~ 348 (493)
T KOG2562|consen 272 FSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYG---DHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKD 348 (493)
T ss_pred eeHHHHHHHHHHHhhhccccccccCHHHHHHHh---ccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCC
Confidence 344455555666888999999999999986643 234567788999983 3345689999999999888777666
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHc-------C---CC-HHHHHHHHHHhcCCCCCceeHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQF-------G---LD-DTQLEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g---~~-~~~~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
....+...|+.+|.|++|.|+..||+.+.... | +. ++.+.+|+..+-..+.|+|+.++|+.
T Consensus 349 t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 349 TPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred CccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 77889999999999999999999998876432 3 22 34455666666667789999999997
No 497
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.71 E-value=3.8e-08 Score=69.23 Aligned_cols=51 Identities=35% Similarity=0.645 Sum_probs=48.0
Q ss_pred CCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 359 NSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
++|+|+.+||+.+|..+|.. .++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999888999 9999999999999999999999999998875
No 498
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.69 E-value=2e-08 Score=101.52 Aligned_cols=97 Identities=27% Similarity=0.356 Sum_probs=87.5
Q ss_pred HHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCCCCCCE
Q 040003 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGV-MHRDLKPENF 260 (489)
Q Consensus 183 ~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-iHrDlKp~Ni 260 (489)
+.+ .|.|+.+++|.+.++...++|.+||..|+|.|.+... ..++..-...+++.|+.|+.|||.-.| .|+-|++.|+
T Consensus 2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 456 7999999999999999999999999999999999763 467777888899999999999998776 9999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~ 283 (489)
++ +....+||.|||+.....
T Consensus 81 lv---d~~w~lklt~~Gl~~~~~ 100 (484)
T KOG1023|consen 81 LV---DSRWVLKLTDFGLNSLLE 100 (484)
T ss_pred ee---eeeEEEEechhhhccccc
Confidence 99 788999999999988774
No 499
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.69 E-value=1.1e-07 Score=74.14 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhh-hcCCCCC-CccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKM-IDTDNSG-YITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~-~D~d~~g-~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
+..+..|..+|+. +|.+++| +|+.+||+.++... +....+.+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999 8888876 99999999999876 334567899999999999999999999999888654
No 500
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.67 E-value=6.5e-08 Score=69.71 Aligned_cols=59 Identities=47% Similarity=0.943 Sum_probs=53.9
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+..+|+.+|.|++|.|+.+|+..++..++ .+.+.+..+++.+|.+++|.|+|+||+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 45789999999999999999999999887 578889999999999999999999999875
Done!