BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040009
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
Query: 2 ELKSCSNDIFIFFFNNQVDICPDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYC--- 58
ELKSC+N+I +FF N + + CC ++DIIT NCWPAMLTSLGFT EE N+LRG+C
Sbjct: 54 ELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNP 113
Query: 59 ---DVSSAPS 65
D S APS
Sbjct: 114 NSGDSSPAPS 123
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Query: 2 ELKSCSNDIFIFFFNNQVDICPDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCDVS 61
ELKSC+N+I +FF N + + CC A+D+IT +CWPAMLTSLGFT EE N+LRG+C
Sbjct: 52 ELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQ-- 109
Query: 62 SAPSLGG 68
+P+ GG
Sbjct: 110 -SPNSGG 115
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 48/58 (82%)
Query: 2 ELKSCSNDIFIFFFNNQVDICPDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 59
ELKSC+N+I +FF N + + DCC+A+++IT +CWPAMLTSLGFT++E N+LRG+C
Sbjct: 52 ELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQ 109
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 1 MELKSCSNDIFIFFFNNQVDICPDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 59
M+L+ CS ++ +FF N + I P CC AI I R CWP M+ LGFTA+EG++L+GYCD
Sbjct: 62 MQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCD 120
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 1 MELKSCSNDIFIFFFNNQVDICP--------DCCRAIDIITRNCWPAMLTSLGFTAEEGN 52
+ELKSC+++I FF + P DCC AI ++ ++CW M TSLG T EGN
Sbjct: 58 LELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSLGLTTMEGN 117
Query: 53 ILRGYCDVSSAPS 65
LR YC+ + S
Sbjct: 118 NLREYCEFQAEKS 130
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 19 VDICPDCCRAIDIITRNCWPAMLTSLGFTAEEGNI 53
VD+ + +DI R+ WP ML+ FT+++ N+
Sbjct: 400 VDLSAETHSCVDIFERDTWPVMLSKWVFTSDDRNL 434
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 24 DCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 59
D CR D++T + W TS+GF AE ++ + D
Sbjct: 209 DACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
>sp|Q4V7H1|STIL_XENLA SCL-interrupting locus protein homolog OS=Xenopus laevis GN=stil
PE=2 SV=2
Length = 1281
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 17 NQVDICPDCCRAIDIITRNCWPAM 40
+Q ++C C + ++NCWPAM
Sbjct: 626 HQTNVCTSCHSLVSCHSKNCWPAM 649
>sp|A1K7J9|OTC_AZOSB Ornithine carbamoyltransferase OS=Azoarcus sp. (strain BH72)
GN=arcB PE=3 SV=1
Length = 311
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 24 DCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 59
+ CR D++T + W TS+GF AE ++ + D
Sbjct: 210 EACRGADLVTTDVW----TSMGFEAENEARMKAFAD 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.142 0.475
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,836,237
Number of Sequences: 539616
Number of extensions: 759499
Number of successful extensions: 2168
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2160
Number of HSP's gapped (non-prelim): 9
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)