BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040013
(586 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449461715|ref|XP_004148587.1| PREDICTED: uncharacterized protein LOC101205291 [Cucumis sativus]
gi|449516744|ref|XP_004165406.1| PREDICTED: uncharacterized protein LOC101224716 [Cucumis sativus]
Length = 502
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/396 (48%), Positives = 248/396 (62%), Gaps = 18/396 (4%)
Query: 202 GASDSKTQ---LPDVSPNSLEAGVSCMKQPECIVVSDLVTGDVSHSFSGHSDSKNMHLDE 258
GA D + Q D+S N+ + S +CI +S +VS S HS + +H+
Sbjct: 114 GAVDLQLQHNSTDDMSNNNKQLLESIASNSDCIELSSSSAQNVSKSL--HSAVERIHVQG 171
Query: 259 IGIQIGETPEKKEEDDATSKLNFSGKLKVGHMQESVPPAIADTKDQVSLEEGPNNFLSIG 318
G + D+ +LKV Q S+ D + L + + F S
Sbjct: 172 PTAVCGSYGDSFPYDNCNRSDVVGQELKV---QPSLKSCAKDESFTIQLGKSNDVFNSTD 228
Query: 319 VSENSVQQAIDKPFDLCPPKKGTVMLNPSLLVTNRQKRNDLKLSIGAKSN--------YI 370
+ +D FD+CPPK G VMLNPSLL NR+KRN+++ ++ + ++
Sbjct: 229 SKDKKPSVDLDS-FDICPPKTGGVMLNPSLLAMNREKRNEMRRAMEGNNGIVLRPGMVHL 287
Query: 371 EAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRP 430
+ + ++ KIVK CRDLG+G GGFYQPGYR+G L+LKMMCLGKNWDP++S YG RP
Sbjct: 288 KGGISVRDQAKIVKKCRDLGIGAGGFYQPGYREGGKLHLKMMCLGKNWDPDSSTYGDIRP 347
Query: 431 TDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGK 490
D PP +P EF+QLV KAI+DS A++ + ST K+ E LP M PDICI NFYS G+
Sbjct: 348 FDDTKPPNLPDEFYQLVEKAIKDSYAIMAEDST-IKNPERVLPWMKPDICIVNFYSQNGR 406
Query: 491 LGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSR 550
LGLHQD+DESQES+DK LPV+SFSIGDSAEFL+GD DV A+KV LESGD+LIFGGKSR
Sbjct: 407 LGLHQDRDESQESLDKGLPVISFSIGDSAEFLFGDRSDVDQAEKVTLESGDILIFGGKSR 466
Query: 551 RIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
+FHGV I +TAPK+LLE T++R GRLNLTFRQY
Sbjct: 467 HVFHGVTAIHSNTAPKALLEATNLRPGRLNLTFRQY 502
>gi|224070999|ref|XP_002303323.1| predicted protein [Populus trichocarpa]
gi|222840755|gb|EEE78302.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 215/299 (71%), Gaps = 14/299 (4%)
Query: 299 ADTKDQVSLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPKKGTVM-LNPSLLVTNRQKRN 357
A DQ+S E+ PN +S G S S QQA+ +PFD+C PK GT + L PSLLV NR+KRN
Sbjct: 27 AGANDQLSQEKDPNIVVSAGDSGYSEQQAVVEPFDICLPKTGTTLKLKPSLLVKNREKRN 86
Query: 358 DLKLSIGAKSNYI--------EAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYL 409
D++ + + I + + + +++KI+K+CRD+GLGPGGFYQP YRDG ++L
Sbjct: 87 DVRRAADGVNGRILRSGMVLLKNYLSLHDQIKIIKLCRDIGLGPGGFYQPVYRDGGRMHL 146
Query: 410 KMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK--ISTGRKD 467
KMM LG++WDP+ +Y RP DGA PI P +FH LV +AI+DSRALIE ST +D
Sbjct: 147 KMMSLGRSWDPDRGKYLEHRPVDGAKAPIFPSDFHPLVERAIKDSRALIEINCKSTAAED 206
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I LP +SP+IC+ NFYS +G+LGLHQDKDES ES+ LPVVSFSIGD EFLYGD R
Sbjct: 207 I---LPPLSPNICVVNFYSESGRLGLHQDKDESPESLRTGLPVVSFSIGDIGEFLYGDQR 263
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
DV A+KV LESGDVLIFGG SR IFHGV + P TAP +LL+ET++R GRLNLTFR+Y
Sbjct: 264 DVEKAEKVKLESGDVLIFGGMSRHIFHGVSSVQPKTAPAALLDETNLRPGRLNLTFREY 322
>gi|225442044|ref|XP_002269640.1| PREDICTED: uncharacterized protein LOC100263508 [Vitis vinifera]
gi|297742962|emb|CBI35829.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/281 (57%), Positives = 203/281 (72%), Gaps = 9/281 (3%)
Query: 315 LSIGVSENSVQQAIDKPFDLCPPKKGT-VMLNPSLLVTNRQKRNDLKLSI-GAKSNYI-- 370
+ G E S + +PFD+CP K GT ++L LL NR+KR + K + G K + I
Sbjct: 177 IGTGNIELSEHPGVVEPFDICPVKTGTSIVLKAPLLSKNREKRRESKRAEEGLKGDVIRS 236
Query: 371 -----EAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQY 425
+ + +++VKIVK C++LGLG GGFYQPGYRDG L L+MMCLGKNWDPET +Y
Sbjct: 237 GMVLLKGYISSSDQVKIVKKCQELGLGSGGFYQPGYRDGGKLNLQMMCLGKNWDPETGKY 296
Query: 426 GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
RP D A PP IP EF LV +AIQDS+AL+ K +E ELP M PDICI NFY
Sbjct: 297 EDERPVDNAKPPPIPDEFFHLVKEAIQDSQALLSKEKIEASKVEKELPWMIPDICIVNFY 356
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
+ +G+LGLHQD+DE++E++ K LPVVSFSIGDSA+FLY + RDV NA +V+LESGDVLIF
Sbjct: 357 TTSGRLGLHQDRDETEETLRKGLPVVSFSIGDSAKFLYSNQRDVFNADEVLLESGDVLIF 416
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
GG+SRRIFHGV I P+T+P+ LL+ET++R GRLNLTFRQY
Sbjct: 417 GGESRRIFHGVASILPNTSPQVLLKETNLRPGRLNLTFRQY 457
>gi|255576587|ref|XP_002529184.1| conserved hypothetical protein [Ricinus communis]
gi|223531362|gb|EEF33198.1| conserved hypothetical protein [Ricinus communis]
Length = 465
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/315 (54%), Positives = 215/315 (68%), Gaps = 14/315 (4%)
Query: 283 GKLKVGHMQE-SVPPAIADTKDQVSLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPK-KG 340
GK + +Q S PP + KDQ E G S +S Q + +PFD+C PK +
Sbjct: 154 GKANIICLQNVSQPPLHSGAKDQSLQEHFSKRTEPTGDSGSSENQPVIEPFDICLPKNRP 213
Query: 341 TVMLNPSLLVTNRQKRNDLKLSIGAKSNYIE-------AWYGITEEVKIVKICRDLGLGP 393
V+L +L NR KRN++K + + +E + I ++V+IV CR+LGLGP
Sbjct: 214 FVVLKSTLFDINRGKRNEIKHASEKQGKILEPGMVLLKGFLSIDDQVRIVNKCRNLGLGP 273
Query: 394 GGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQD 453
GGFYQPGYR GA L LKMMCLG+NWDP+TS Y R DGA PIIP EF +LV KA++D
Sbjct: 274 GGFYQPGYRGGAKLRLKMMCLGRNWDPDTSSYEELRSIDGAAAPIIPDEFCELVKKAMKD 333
Query: 454 SRALIEK--ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
S AL ++ +T +DI LP M+PDIC+ NFYS +G+LGLHQDKDES+ S+ K LPVV
Sbjct: 334 SIALSQRNNKATSAEDI---LPGMTPDICVVNFYSTSGRLGLHQDKDESEGSLRKGLPVV 390
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
SFSIGD+ EFLYGD RD +AKKV+LESGDVLIFGGKSR IFHGV + +TAPKSLLEE
Sbjct: 391 SFSIGDAGEFLYGDTRDEKDAKKVLLESGDVLIFGGKSRHIFHGVRSVHINTAPKSLLEE 450
Query: 572 TSMRRGRLNLTFRQY 586
+ +R GRLNLTFRQY
Sbjct: 451 SDLRAGRLNLTFRQY 465
>gi|240255344|ref|NP_566479.5| 2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis
thaliana]
gi|9294641|dbj|BAB02980.1| unnamed protein product [Arabidopsis thaliana]
gi|332641958|gb|AEE75479.1| 2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis
thaliana]
Length = 455
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/300 (55%), Positives = 210/300 (70%), Gaps = 7/300 (2%)
Query: 291 QESVPPAIADTKDQVSLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPKKGTVMLNPSLLV 350
QESV + + S+E+ + + G NS ++ + FD+ KKG ++L P+LLV
Sbjct: 159 QESVSSTVVQKVELSSVEDQKSAPKADGAG-NSSNESSTRHFDIFLEKKG-IVLKPNLLV 216
Query: 351 TNRQKRNDLKLSIGAKSN----YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGAN 406
+R+K+ K G ++ + I ++V IV CR LGLG GGFYQPGYRD A
Sbjct: 217 LSREKKKAAKGYSGTVIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAK 276
Query: 407 LYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRK 466
L+LKMMCLGKNWDPETS+YG +RP DG+ P IP EF+Q V KA+++S++L S K
Sbjct: 277 LHLKMMCLGKNWDPETSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTK 336
Query: 467 DIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDL 526
+ E+P M PDICI NFYS+TG+LGLHQDKDES+ SI K LPVVSFSIGDSAEFLYGD
Sbjct: 337 GGD-EIPFMLPDICIVNFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQ 395
Query: 527 RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
RD A+ + LESGDVL+FGG+SR++FHGV I DTAPK+LL+ETS+R GRLNLTFRQY
Sbjct: 396 RDEDKAETLTLESGDVLLFGGRSRKVFHGVRSIRKDTAPKALLQETSLRPGRLNLTFRQY 455
>gi|24030229|gb|AAN41292.1| unknown protein [Arabidopsis thaliana]
Length = 313
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/300 (55%), Positives = 210/300 (70%), Gaps = 7/300 (2%)
Query: 291 QESVPPAIADTKDQVSLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPKKGTVMLNPSLLV 350
QESV + + S+E+ + + G NS ++ + FD+ KKG ++L P+LLV
Sbjct: 17 QESVSSTVVQKVELSSVEDQKSAPKADGAG-NSSNESSTRHFDIFLEKKG-IVLKPNLLV 74
Query: 351 TNRQKRNDLKLSIGAKSN----YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGAN 406
+R+K+ K G ++ + I ++V IV CR LGLG GGFYQPGYRD A
Sbjct: 75 LSREKKKAAKGYSGTVIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAK 134
Query: 407 LYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRK 466
L+LKMMCLGKNWDPETS+YG +RP DG+ P IP EF+Q V KA+++S++L S K
Sbjct: 135 LHLKMMCLGKNWDPETSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTK 194
Query: 467 DIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDL 526
+ E+P M PDICI NFYS+TG+LGLHQDKDES+ SI K LPVVSFSIGDSAEFLYGD
Sbjct: 195 GGD-EIPFMLPDICIVNFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQ 253
Query: 527 RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
RD A+ + LESGDVL+FGG+SR++FHGV I DTAPK+LL+ETS+R GRLNLTFRQY
Sbjct: 254 RDEDKAETLTLESGDVLLFGGRSRKVFHGVRSIRKDTAPKALLQETSLRPGRLNLTFRQY 313
>gi|297829976|ref|XP_002882870.1| hypothetical protein ARALYDRAFT_478829 [Arabidopsis lyrata subsp.
lyrata]
gi|297328710|gb|EFH59129.1| hypothetical protein ARALYDRAFT_478829 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 208/303 (68%), Gaps = 15/303 (4%)
Query: 291 QESVPPA---IADTKDQVSLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPKKGTVMLNPS 347
QESV PA ++ +D S ++ G S N ++ + FDL KKG V+L PS
Sbjct: 17 QESVSPASVELSSVEDHKSAQKADE----AGSSSN---ESSTRHFDLFLMKKG-VVLKPS 68
Query: 348 LLVTNRQKRNDLK----LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRD 403
L+ TNR K+ K + I ++ + I ++V IV CR L LG GGFYQPGYRD
Sbjct: 69 LMETNRVKKKAAKGYTGIVIRPGMVLLKNYLSINDQVMIVNKCRQLCLGEGGFYQPGYRD 128
Query: 404 GANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKIST 463
L+LKMMCLGKNWDPETS+YG RP DG+ PP IP EF+Q V KA+++S++L ++
Sbjct: 129 ETKLHLKMMCLGKNWDPETSRYGEIRPIDGSTPPKIPAEFNQFVEKAVKESQSLAASSNS 188
Query: 464 GRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLY 523
E +P M PDICI NFY++TG+LGLHQDKDES+ SI K LPVVSFSIGDSAEFLY
Sbjct: 189 KETKGEDGIPFMLPDICIVNFYTSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLY 248
Query: 524 GDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTF 583
GD RD A+ +ILESGDVLIFGG+SR++FHGV I DTAPK L++ETS+R GRLNLTF
Sbjct: 249 GDQRDEDKAETLILESGDVLIFGGRSRKVFHGVRSIRKDTAPKPLVQETSLRPGRLNLTF 308
Query: 584 RQY 586
RQY
Sbjct: 309 RQY 311
>gi|23397329|gb|AAK44006.2|AF370191_1 unknown protein [Arabidopsis thaliana]
Length = 253
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/253 (60%), Positives = 189/253 (74%), Gaps = 6/253 (2%)
Query: 338 KKGTVMLNPSLLVTNRQKRNDLKLSIGAKSN----YIEAWYGITEEVKIVKICRDLGLGP 393
KKG ++L P+LLV +R+K+ K G ++ + I ++V IV CR LGLG
Sbjct: 3 KKG-IVLKPNLLVLSREKKKAAKGYSGTVIRPGMVLLKNYLSINDQVMIVNKCRRLGLGE 61
Query: 394 GGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQD 453
GGFYQPGYRD A L+LKMMCLGKNWDPETS+YG +RP DG+ P IP EF+Q V KA+++
Sbjct: 62 GGFYQPGYRDEAKLHLKMMCLGKNWDPETSRYGETRPFDGSTAPRIPAEFNQFVEKAVKE 121
Query: 454 SRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSF 513
S++L S K + E+P M PDICI NFYS+TG+LGLHQDKDES+ SI K LPVVSF
Sbjct: 122 SQSLAASNSKQTKGGD-EIPFMLPDICIVNFYSSTGRLGLHQDKDESENSIRKGLPVVSF 180
Query: 514 SIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS 573
SIGDSAEFLYGD RD A+ + LESGDVL+FGG+SR++FHGV I DTAPK+LL+ETS
Sbjct: 181 SIGDSAEFLYGDQRDEDKAETLTLESGDVLLFGGRSRKVFHGVRSIRKDTAPKALLQETS 240
Query: 574 MRRGRLNLTFRQY 586
+R GRLNLTFRQY
Sbjct: 241 LRPGRLNLTFRQY 253
>gi|242037635|ref|XP_002466212.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
gi|241920066|gb|EER93210.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
Length = 381
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/264 (56%), Positives = 184/264 (69%), Gaps = 9/264 (3%)
Query: 331 PFDLC-PPKKGTVMLNPSLLVTNRQKRNDLK-------LSIGAKSNYIEAWYGITEEVKI 382
P D+C V L PS+L TNR+KR D + L + ++ + ++VKI
Sbjct: 119 PLDICMSASTCAVKLKPSILETNREKRRDRECSKDVAPLQLRPGMVLLKRFIKPNDQVKI 178
Query: 383 VKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVE 442
VK+CR LG+GPGGFY+PGYR+GA L L MMCLGKNWDP + YG RP DGA PP IP E
Sbjct: 179 VKLCRQLGVGPGGFYRPGYRNGAMLRLWMMCLGKNWDPNSYSYGDRRPFDGAQPPTIPEE 238
Query: 443 FHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQE 502
F + V IQ S +++ G + E+P MSPDIC+ NFY+++G+LGLHQDKDES+
Sbjct: 239 FKKFVQDVIQASNEFLKQ-QKGAANAVQEIPAMSPDICLVNFYNSSGRLGLHQDKDESKS 297
Query: 503 SIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPD 562
S+DK LPVVSFSIG++AEFLYGD+RD KV LESGDVLIFGG+SR IFHGV P
Sbjct: 298 SLDKGLPVVSFSIGETAEFLYGDVRDQEKLSKVDLESGDVLIFGGQSRLIFHGVSTTKPK 357
Query: 563 TAPKSLLEETSMRRGRLNLTFRQY 586
TAPK L++ET++R GRLNLTFRQY
Sbjct: 358 TAPKWLMDETNLRPGRLNLTFRQY 381
>gi|297735575|emb|CBI18069.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 193/264 (73%), Gaps = 14/264 (5%)
Query: 330 KPFDLCPPKKGTVMLNPSLLVTNRQKRNDLKLSIGAKSN--------YIEAWYGITEEVK 381
+PFD+C K G + L+ ++N++K S+ + ++ + +TE++K
Sbjct: 296 EPFDIC--KSGVMHPVKKCLIP---EQNEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIK 350
Query: 382 IVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPV 441
+VK CRDLG+GPGGFY+PGY+DGA L L+MMCLG NWDP+T +Y P DG+ P IP
Sbjct: 351 MVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPH 410
Query: 442 EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQ 501
EF LV +AIQDS++LI+K ++G ++E LP MSP+ICI NFY+ +G+LGLHQD+DES+
Sbjct: 411 EFSVLVERAIQDSQSLIKK-NSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQDRDESE 469
Query: 502 ESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFP 561
ES+ K LPVVSFS+GDSAEFLYG+ R+V A KV+LESGDVLIFGG SR IFHGV I P
Sbjct: 470 ESLLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKVVLESGDVLIFGGPSRHIFHGVSSIIP 529
Query: 562 DTAPKSLLEETSMRRGRLNLTFRQ 585
++AP SLLEET++ GRLNLT RQ
Sbjct: 530 NSAPNSLLEETNLLPGRLNLTLRQ 553
>gi|356573293|ref|XP_003554797.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase AlkB homolog
[Glycine max]
Length = 311
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 190/269 (70%), Gaps = 25/269 (9%)
Query: 329 DKP----FDLCPPKK-GTVMLNPSLLVTNRQKR------NDLKLSIGAKSNYIEAWYGIT 377
DKP FD+CPPK+ G+V+L P L + NR+KR +++ +S+ +++ + ++
Sbjct: 57 DKPAASGFDICPPKQAGSVVLKPPLFLKNREKRQSSNSRSNVVVSLRPGMVFLKGYLSLS 116
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPP 437
++ IVK CR+LG+G GGFYQPGY + ++LKMMCLGKNWDP++ QYG RP DGA PP
Sbjct: 117 DQEMIVKRCRELGVGSGGFYQPGYGEDTKMHLKMMCLGKNWDPQSGQYGDRRPFDGAKPP 176
Query: 438 IIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDK 497
IP EFH V A++DS AL LP +SPDICI NFYS TG+LGLHQDK
Sbjct: 177 QIPPEFHSHVHSALKDSNAL--------------LPSISPDICIVNFYSQTGRLGLHQDK 222
Query: 498 DESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVE 557
DES +S+ LPV+SFSIGDSA+FLY D RD+ +K++L+SGDVLIFGG SR IFHGV
Sbjct: 223 DESPDSLRLGLPVISFSIGDSADFLYADHRDLDQPQKLLLQSGDVLIFGGPSRNIFHGVA 282
Query: 558 KIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P+TAP LL+ T++R GRLNLTFR+Y
Sbjct: 283 SIHPNTAPNLLLQHTNLRPGRLNLTFRRY 311
>gi|225439617|ref|XP_002267882.1| PREDICTED: uncharacterized protein LOC100246527 isoform 1 [Vitis
vinifera]
Length = 456
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 193/264 (73%), Gaps = 14/264 (5%)
Query: 330 KPFDLCPPKKGTVMLNPSLLVTNRQKRNDLKLSIGAKSN--------YIEAWYGITEEVK 381
+PFD+C K G + L+ ++N++K S+ + ++ + +TE++K
Sbjct: 198 EPFDIC--KSGVMHPVKKCLIP---EQNEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIK 252
Query: 382 IVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPV 441
+VK CRDLG+GPGGFY+PGY+DGA L L+MMCLG NWDP+T +Y P DG+ P IP
Sbjct: 253 MVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPH 312
Query: 442 EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQ 501
EF LV +AIQDS++LI+K ++G ++E LP MSP+ICI NFY+ +G+LGLHQD+DES+
Sbjct: 313 EFSVLVERAIQDSQSLIKK-NSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQDRDESE 371
Query: 502 ESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFP 561
ES+ K LPVVSFS+GDSAEFLYG+ R+V A KV+LESGDVLIFGG SR IFHGV I P
Sbjct: 372 ESLLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKVVLESGDVLIFGGPSRHIFHGVSSIIP 431
Query: 562 DTAPKSLLEETSMRRGRLNLTFRQ 585
++AP SLLEET++ GRLNLT RQ
Sbjct: 432 NSAPNSLLEETNLLPGRLNLTLRQ 455
>gi|226507824|ref|NP_001141140.1| hypothetical protein [Zea mays]
gi|194702846|gb|ACF85507.1| unknown [Zea mays]
gi|413932645|gb|AFW67196.1| hypothetical protein ZEAMMB73_974323 [Zea mays]
Length = 345
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 186/267 (69%), Gaps = 10/267 (3%)
Query: 329 DKPFDLCPP-KKGTVMLNPSLLVTNRQKRN-------DLK-LSIGAKSNYIEAWYGITEE 379
+ PFD+C K V L PS+ TNR+++ D++ L + ++ + ++
Sbjct: 80 EAPFDICMSGNKCAVKLKPSIFETNRERKQRDRECSKDVRPLQLRPGMVLLKRFIKPNDQ 139
Query: 380 VKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPII 439
VKIVK+C LG+GPGGFY+PGYR+GA L L MMCLGKNWDP++S YG R DGA PP I
Sbjct: 140 VKIVKLCSQLGVGPGGFYRPGYRNGALLKLWMMCLGKNWDPDSSSYGDRRLFDGAQPPTI 199
Query: 440 PVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE 499
P EF + V IQ S + K G ++ E+P MSPDICI NFY+++G+LGLHQDKDE
Sbjct: 200 PEEFQKFVQDGIQASHEFL-KQQKGATNVVQEIPAMSPDICIVNFYNSSGRLGLHQDKDE 258
Query: 500 SQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
SQ S+DK LPVVSFSIG++AEF++GD+RD KV LESGDVLIFGG+SR IFHGV
Sbjct: 259 SQSSLDKGLPVVSFSIGETAEFMFGDVRDEEKISKVDLESGDVLIFGGESRLIFHGVNNT 318
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQY 586
P TAPK L +ETS+R GRLNLTFRQY
Sbjct: 319 KPKTAPKWLTDETSLRPGRLNLTFRQY 345
>gi|224140571|ref|XP_002323656.1| predicted protein [Populus trichocarpa]
gi|222868286|gb|EEF05417.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 168/217 (77%), Gaps = 8/217 (3%)
Query: 370 IEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSR 429
++ + + +++++VK CR++GLGPGGFY+PGY++GA L L+MMCLG NWDPET +Y
Sbjct: 28 LKRYISLGDQIEMVKTCREIGLGPGGFYRPGYKNGAKLRLQMMCLGLNWDPETRKYEDRS 87
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
P DG PP IP EF+QLV AIQD+ L+ K + LP MSPDICI NFY+ G
Sbjct: 88 PADGCKPPCIPREFNQLVETAIQDAHGLLGK--------DYMLPTMSPDICIVNFYTTNG 139
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKS 549
+LGLHQD+DES ES+DK LPVVSFS+GDSAEFLYGD RDV A KV+LESGDVLIFGGKS
Sbjct: 140 RLGLHQDRDESSESLDKGLPVVSFSVGDSAEFLYGDQRDVNKADKVVLESGDVLIFGGKS 199
Query: 550 RRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
R IFHGV + P++APK+L+EET +R GRLNLTFRQY
Sbjct: 200 RHIFHGVTSVIPNSAPKALIEETRLRPGRLNLTFRQY 236
>gi|356495097|ref|XP_003516417.1| PREDICTED: uncharacterized protein LOC100818496 [Glycine max]
Length = 447
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 191/275 (69%), Gaps = 16/275 (5%)
Query: 323 SVQQAIDKPFDLC-PPKKGTVMLNPSLLVTNRQ----------KRNDLKLSIGAKSNYIE 371
SV + KPFD+C ++ ++ +L N + K L+ + NYI
Sbjct: 178 SVGSPMSKPFDICFSGRRNPALIGATLPGDNEKSCIEMQEEKIKGGILRPGMVLLKNYIT 237
Query: 372 AWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPT 431
+ E+V+IVK+CR+LGLGPGGFYQPGY +GA L LKMMCLG +W+P++ +YG R
Sbjct: 238 ----LDEQVEIVKVCRELGLGPGGFYQPGYANGAKLRLKMMCLGMDWNPQSYKYGKKRVI 293
Query: 432 DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKL 491
DG+ PP IP F QLV +AIQ++ ++I+K + K +E ELP M+PDICI NFY+ GKL
Sbjct: 294 DGSKPPSIPYHFSQLVIRAIQEAHSIIKKENRVFK-VEDELPSMTPDICIVNFYTNNGKL 352
Query: 492 GLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRR 551
GLHQD DES+ES+ K LPVVSFSIGDSAEFLYGD R+V A V+LESGDVLIFGG+SR
Sbjct: 353 GLHQDNDESRESLRKGLPVVSFSIGDSAEFLYGDERNVEKADSVLLESGDVLIFGGESRH 412
Query: 552 IFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
+FHGV + P++APK LL +T + GRLNLTFRQY
Sbjct: 413 VFHGVSSVLPNSAPKELLRDTCLCPGRLNLTFRQY 447
>gi|358249036|ref|NP_001239982.1| uncharacterized protein LOC100775999 [Glycine max]
gi|255646130|gb|ACU23551.1| unknown [Glycine max]
Length = 311
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/269 (53%), Positives = 187/269 (69%), Gaps = 25/269 (9%)
Query: 329 DKP----FDLCPPKK-GTVMLNPSLLVTNRQKR------NDLKLSIGAKSNYIEAWYGIT 377
DKP FD+CPPK+ G+V+L P LL+ NR+KR +++ +S+ +++ + ++
Sbjct: 57 DKPAAAGFDICPPKQAGSVVLKPPLLLKNREKRQSSNSRSNVVVSLRPGMVFLKGYLSLS 116
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPP 437
++ IVK CR+LG+G GGFYQ GY + ++LKMMCL KNWDP+ QYG RP DGA PP
Sbjct: 117 DQEMIVKRCRELGVGSGGFYQHGYGEDTKMHLKMMCLEKNWDPQFGQYGDRRPFDGAKPP 176
Query: 438 IIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDK 497
IP EFH V A++DS AL LP +SPDICI NFYS TG+LGLHQDK
Sbjct: 177 QIPPEFHSHVHSALKDSNAL--------------LPSISPDICIVNFYSETGRLGLHQDK 222
Query: 498 DESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVE 557
DES +S+ LPV+SFSIGDSA+FLY D RD+ KK++L+SGDVLIFGG SR +FHGV
Sbjct: 223 DESPDSLRLGLPVISFSIGDSADFLYADHRDLDQPKKLLLQSGDVLIFGGPSRNLFHGVA 282
Query: 558 KIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P+TAP LL+ T++ GRLNLTFR+Y
Sbjct: 283 SIHPNTAPNLLLQHTNLCPGRLNLTFRRY 311
>gi|357114937|ref|XP_003559250.1| PREDICTED: uncharacterized protein LOC100841984 [Brachypodium
distachyon]
Length = 391
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 187/268 (69%), Gaps = 17/268 (6%)
Query: 331 PFDLCPPKKGTVMLNPSLLVTNRQKR------------NDLKLSIGAKSNYIEAWYGITE 378
PFD+C K +V + PSLL NR+KR L+ + N+++ +
Sbjct: 129 PFDICGDSKCSVNVKPSLLEINREKRRAKERSNSVAQLQHLRPGMVLLKNFLKP----DD 184
Query: 379 EVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPI 438
+++I+ +CR++G+G GGFY PGYRDGA L L+MMCLGK+W+P++S YG R DGA PP
Sbjct: 185 QIEIINLCREVGVGKGGFYTPGYRDGAKLSLRMMCLGKDWNPDSSSYGDVRAFDGAEPPE 244
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
IP +F +LV AI S + K G + ELP MSPDICI NFY++ G+LGLHQDKD
Sbjct: 245 IPEKFKELVQGAIGASHEFL-KGRKGTSNPSVELPPMSPDICIVNFYTSRGRLGLHQDKD 303
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
ESQ+S+ K LPVVSFS+GD+AEFLYGD RD A KV LE+GDVLIFGG+SRRIFHGV +
Sbjct: 304 ESQDSLTKGLPVVSFSLGDTAEFLYGDSRDDTKASKVDLETGDVLIFGGESRRIFHGVSQ 363
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P TAPK L ++++++ GRLNLTFR+Y
Sbjct: 364 IKPKTAPKWLTDKSNLQPGRLNLTFRKY 391
>gi|147807459|emb|CAN70743.1| hypothetical protein VITISV_010007 [Vitis vinifera]
Length = 209
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 166/207 (80%), Gaps = 1/207 (0%)
Query: 379 EVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPI 438
++K+VK CRDLG+GPGGFY+PGY+DGA L L+MMCLG NWDP+T +Y P DG+ P
Sbjct: 3 QIKMVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETPD 62
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
IP EF LV +AIQDS++LI+K ++G ++E LP MSP+ICI NFY+ +G+LGLHQD+D
Sbjct: 63 IPHEFSVLVERAIQDSQSLIKK-NSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQDRD 121
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
ES ES+ K LPVVSFS+GDSAEFLYG+ R+V A KV+LESGDVLIFGG SR IFHGV
Sbjct: 122 ESXESLLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKVVLESGDVLIFGGPSRHIFHGVSS 181
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFRQ 585
I P++AP SLLEET++ GRLNLT RQ
Sbjct: 182 IIPNSAPNSLLEETNLLPGRLNLTLRQ 208
>gi|115456185|ref|NP_001051693.1| Os03g0816500 [Oryza sativa Japonica Group]
gi|28875999|gb|AAO60008.1| unknown protein [Oryza sativa Japonica Group]
gi|113550164|dbj|BAF13607.1| Os03g0816500 [Oryza sativa Japonica Group]
Length = 513
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/267 (54%), Positives = 185/267 (69%), Gaps = 12/267 (4%)
Query: 331 PFDLCPPK--KGTVMLNPSLLVTNRQKRNDL-KLSI-GAKSNYIEAWYGIT-------EE 379
PFD+C + K ++ L+ SLL NR+KR + +LS A Y+ + ++
Sbjct: 248 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQ 307
Query: 380 VKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPII 439
V I++ C+ LG+G GGFY PGYRDG L L+MMCLGKNWDP + YG +RP DGA PP I
Sbjct: 308 VDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSI 367
Query: 440 PVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE 499
P F ++V AIQ S + + + D+E ELP +SPDIC+ NFY+++GKLGLHQDKDE
Sbjct: 368 PEVFSKIVKDAIQASNEFLRQKARPANDVE-ELPPLSPDICLVNFYTSSGKLGLHQDKDE 426
Query: 500 SQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
++ S+ K LPVVSFS+GD+AEFLYGD+ DV A KV LESGDVLIFGGKSR IFHGV +I
Sbjct: 427 TKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRI 486
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQY 586
P TAP L +E +R GRLNLTFRQ+
Sbjct: 487 KPKTAPNWLTDEAKLRPGRLNLTFRQH 513
>gi|359481179|ref|XP_003632586.1| PREDICTED: uncharacterized protein LOC100246527 isoform 2 [Vitis
vinifera]
Length = 482
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/290 (50%), Positives = 193/290 (66%), Gaps = 40/290 (13%)
Query: 330 KPFDLCPPKKGTVMLNPSLLVTNRQKRNDLKLSIGAKSN--------YIEAWYGITEEVK 381
+PFD+C K G + L+ ++N++K S+ + ++ + +TE++K
Sbjct: 198 EPFDIC--KSGVMHPVKKCLIP---EQNEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIK 252
Query: 382 IVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPV 441
+VK CRDLG+GPGGFY+PGY+DGA L L+MMCLG NWDP+T +Y P DG+ P IP
Sbjct: 253 MVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPH 312
Query: 442 EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQ------ 495
EF LV +AIQDS++LI+K ++G ++E LP MSP+ICI NFY+ +G+LGLHQ
Sbjct: 313 EFSVLVERAIQDSQSLIKK-NSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQVCPSQV 371
Query: 496 --------------------DKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
D+DES+ES+ K LPVVSFS+GDSAEFLYG+ R+V A KV
Sbjct: 372 YPSSSYQQNSNYFTFKSLFTDRDESEESLLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKV 431
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+LESGDVLIFGG SR IFHGV I P++AP SLLEET++ GRLNLT RQ
Sbjct: 432 VLESGDVLIFGGPSRHIFHGVSSIIPNSAPNSLLEETNLLPGRLNLTLRQ 481
>gi|449464420|ref|XP_004149927.1| PREDICTED: uncharacterized protein LOC101210053 [Cucumis sativus]
Length = 444
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 190/281 (67%), Gaps = 7/281 (2%)
Query: 306 SLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPKKGTVMLNPSLLVTNRQKRNDLKLSIGA 365
SL+ GP + V++NS+ + PFD+C P G V +V D +L +
Sbjct: 171 SLDTGPKESV---VTDNSL--PFEPPFDICLPGGGNVKHRNIYVVKEGGTVKDYRL-LRP 224
Query: 366 KSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQY 425
++ + E++ IVK C++LG+GPGGFYQPGY+DGA L L+MMCLG +WDP+T +Y
Sbjct: 225 GMVLLKHYITPREQINIVKTCQNLGIGPGGFYQPGYKDGAKLRLRMMCLGLDWDPQTRRY 284
Query: 426 GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R DG PP IP +F LV +A++D+ A I K + ++E LP MSPDICIANFY
Sbjct: 285 ENKRVVDGNKPPDIPPQFTFLVKRALKDAHAFI-KNNCNISNVEEILPSMSPDICIANFY 343
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
+ G+LGLHQD+DES+ES+ + LPVVSFS+G++AEFLYGD R+V A+ V LESGDVLIF
Sbjct: 344 TTRGRLGLHQDRDESKESLWRGLPVVSFSVGNAAEFLYGDKRNVDKAEMVELESGDVLIF 403
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
GG+SR IFHGV I P + PK LL T +R GRLNLTFR+Y
Sbjct: 404 GGESRHIFHGVSSIIPKSTPKFLLHHTGLRPGRLNLTFRKY 444
>gi|108711754|gb|ABF99549.1| oxidoreductase, 2OG-Fe oxygenase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|125588388|gb|EAZ29052.1| hypothetical protein OsJ_13105 [Oryza sativa Japonica Group]
Length = 371
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/267 (54%), Positives = 185/267 (69%), Gaps = 12/267 (4%)
Query: 331 PFDLCPPK--KGTVMLNPSLLVTNRQKRNDL-KLSI-GAKSNYIEAWYGIT-------EE 379
PFD+C + K ++ L+ SLL NR+KR + +LS A Y+ + ++
Sbjct: 106 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQ 165
Query: 380 VKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPII 439
V I++ C+ LG+G GGFY PGYRDG L L+MMCLGKNWDP + YG +RP DGA PP I
Sbjct: 166 VDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSI 225
Query: 440 PVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE 499
P F ++V AIQ S + + + D+E ELP +SPDIC+ NFY+++GKLGLHQDKDE
Sbjct: 226 PEVFSKIVKDAIQASNEFLRQKARPANDVE-ELPPLSPDICLVNFYTSSGKLGLHQDKDE 284
Query: 500 SQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
++ S+ K LPVVSFS+GD+AEFLYGD+ DV A KV LESGDVLIFGGKSR IFHGV +I
Sbjct: 285 TKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRI 344
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQY 586
P TAP L +E +R GRLNLTFRQ+
Sbjct: 345 KPKTAPNWLTDEAKLRPGRLNLTFRQH 371
>gi|449510843|ref|XP_004163780.1| PREDICTED: uncharacterized LOC101210053 [Cucumis sativus]
Length = 444
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 189/281 (67%), Gaps = 7/281 (2%)
Query: 306 SLEEGPNNFLSIGVSENSVQQAIDKPFDLCPPKKGTVMLNPSLLVTNRQKRNDLKLSIGA 365
SL+ GP + V++NS+ + PFD+C P G V +V D +L +
Sbjct: 171 SLDTGPKESV---VTDNSL--PFEPPFDICLPGGGNVKHRNIYVVKEGGTVKDYRL-LRP 224
Query: 366 KSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQY 425
++ + E++ IVK C++LG+GPGGFYQPGY+DGA L L+MMCLG +WDP+T +Y
Sbjct: 225 GMVLLKHYITPREQINIVKTCQNLGIGPGGFYQPGYKDGAKLRLRMMCLGLDWDPQTRRY 284
Query: 426 GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R DG PP IP +F LV +A++D+ A I K + ++E LP MSPDICIANFY
Sbjct: 285 ENKRVVDGNKPPDIPPQFTFLVKRALKDAHAFI-KNNCNISNVEEILPSMSPDICIANFY 343
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
+ G+LGLHQD+DES+ES+ LPVVSFS+G++AEFLYGD R+V A+ V LESGDVLIF
Sbjct: 344 TTRGRLGLHQDRDESKESLWTGLPVVSFSVGNTAEFLYGDKRNVDKAEMVELESGDVLIF 403
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
GG+SR IFHGV I P + PK LL T +R GRLNLTFR+Y
Sbjct: 404 GGESRHIFHGVSSIIPKSTPKFLLHHTGLRPGRLNLTFRKY 444
>gi|218193984|gb|EEC76411.1| hypothetical protein OsI_14065 [Oryza sativa Indica Group]
Length = 369
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/267 (53%), Positives = 183/267 (68%), Gaps = 12/267 (4%)
Query: 331 PFDLCPPK--KGTVMLNPSLLVTNRQKRNDL-KLSI-GAKSNYIEAWYGIT-------EE 379
PFD+C + K ++ L+ SLL NR+KR + +LS A Y+ + ++
Sbjct: 104 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQ 163
Query: 380 VKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPII 439
V I++ C+ LG+G GGFY PGYRD L L+MMCLGKNWDP + YG +RP DGA PP I
Sbjct: 164 VDIIRRCQKLGIGSGGFYTPGYRDSGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSI 223
Query: 440 PVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE 499
P F ++V AIQ S + + + D+E ELP +SPDIC+ NFY+++GKL LH+DKDE
Sbjct: 224 PEVFSKIVKDAIQASNEFLRQKARPANDVE-ELPPLSPDICLVNFYTSSGKLALHRDKDE 282
Query: 500 SQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
++ S+ K LPVVSFS+GD+AEFLYGD+ DV A KV LESGDVLIFGGKSR IFHGV +I
Sbjct: 283 TKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRI 342
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQY 586
P TAP L +E +R GRLNLTFRQ+
Sbjct: 343 KPKTAPNWLTDEAKLRPGRLNLTFRQH 369
>gi|357470119|ref|XP_003605344.1| Alpha-ketoglutarate-dependent dioxygenase alkB-like protein
[Medicago truncatula]
gi|355506399|gb|AES87541.1| Alpha-ketoglutarate-dependent dioxygenase alkB-like protein
[Medicago truncatula]
Length = 437
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPP 437
E+V+IVK CRDLGLGPGGFYQPGY DGA LKMMCLG +WDP+T +YG R DG+ PP
Sbjct: 234 EQVEIVKKCRDLGLGPGGFYQPGYGDGAKFRLKMMCLGMDWDPQTRKYGYKREIDGSKPP 293
Query: 438 IIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDK 497
IP F +LV ++IQ++R LI + S +E LP ++PDICI NFY G+LGLHQD+
Sbjct: 294 SIPHYFSKLVIRSIQEARNLINQES-----VEHILPSITPDICIVNFYLTNGRLGLHQDR 348
Query: 498 DESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVE 557
DES+ES+ K LPVVSFSIGDSAEFLY D R+V A+ V+LESGDVLIFGG+SR ++HGV
Sbjct: 349 DESRESLQKGLPVVSFSIGDSAEFLYSDQRNVEKAENVLLESGDVLIFGGESRHVYHGVS 408
Query: 558 KIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I ++AP L+++T + GRLNLTFRQY
Sbjct: 409 SIIQNSAPDELVQDTCLCPGRLNLTFRQY 437
>gi|334187371|ref|NP_001190202.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332003008|gb|AED90391.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 442
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 163/208 (78%), Gaps = 3/208 (1%)
Query: 379 EVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPI 438
+V IVK CR+LG+ P GFYQPGY G+ L+L+MMCLG+NWDP+T +Y + D P I
Sbjct: 238 QVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKAPEI 296
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
PV F+ LV KAI+++ ALI++ +G +D E LP MSPDICI NFYS TG+LGLHQD+D
Sbjct: 297 -PVTFNVLVEKAIREAHALIDR-ESGTEDAERILPVMSPDICIVNFYSETGRLGLHQDRD 354
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
ES+ESI + LP+VSFSIGDSAEFLYG+ RDV A+ VILESGDVLIFGG+SR IFHGV+
Sbjct: 355 ESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGVKS 414
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P++AP SLL E+ +R GRLNLTFR +
Sbjct: 415 IIPNSAPMSLLNESKLRTGRLNLTFRHF 442
>gi|186519239|ref|NP_195798.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332003007|gb|AED90390.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 387
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 163/208 (78%), Gaps = 3/208 (1%)
Query: 379 EVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPI 438
+V IVK CR+LG+ P GFYQPGY G+ L+L+MMCLG+NWDP+T +Y + D P I
Sbjct: 183 QVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKAPEI 241
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
PV F+ LV KAI+++ ALI++ +G +D E LP MSPDICI NFYS TG+LGLHQD+D
Sbjct: 242 -PVTFNVLVEKAIREAHALIDR-ESGTEDAERILPVMSPDICIVNFYSETGRLGLHQDRD 299
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
ES+ESI + LP+VSFSIGDSAEFLYG+ RDV A+ VILESGDVLIFGG+SR IFHGV+
Sbjct: 300 ESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGVKS 359
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P++AP SLL E+ +R GRLNLTFR +
Sbjct: 360 IIPNSAPMSLLNESKLRTGRLNLTFRHF 387
>gi|7329651|emb|CAB82748.1| putative protein [Arabidopsis thaliana]
Length = 449
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 163/208 (78%), Gaps = 3/208 (1%)
Query: 379 EVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPI 438
+V IVK CR+LG+ P GFYQPGY G+ L+L+MMCLG+NWDP+T +Y + D P I
Sbjct: 245 QVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKAPEI 303
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
PV F+ LV KAI+++ ALI++ +G +D E LP MSPDICI NFYS TG+LGLHQD+D
Sbjct: 304 -PVTFNVLVEKAIREAHALIDR-ESGTEDAERILPVMSPDICIVNFYSETGRLGLHQDRD 361
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
ES+ESI + LP+VSFSIGDSAEFLYG+ RDV A+ VILESGDVLIFGG+SR IFHGV+
Sbjct: 362 ESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGVKS 421
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P++AP SLL E+ +R GRLNLTFR +
Sbjct: 422 IIPNSAPMSLLNESKLRTGRLNLTFRHF 449
>gi|227202818|dbj|BAH56882.1| AT5G01780 [Arabidopsis thaliana]
Length = 217
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 163/208 (78%), Gaps = 3/208 (1%)
Query: 379 EVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPI 438
+V IVK CR+LG+ P GFYQPGY G+ L+L+MMCLG+NWDP+T +Y + D P I
Sbjct: 13 QVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKAPEI 71
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
PV F+ LV KAI+++ ALI++ +G +D E LP MSPDICI NFYS TG+LGLHQD+D
Sbjct: 72 -PVTFNVLVEKAIREAHALIDR-ESGTEDAERILPVMSPDICIVNFYSETGRLGLHQDRD 129
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
ES+ESI + LP+VSFSIGDSAEFLYG+ RDV A+ VILESGDVLIFGG+SR IFHGV+
Sbjct: 130 ESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGVKS 189
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P++AP SLL E+ +R GRLNLTFR +
Sbjct: 190 IIPNSAPMSLLNESKLRTGRLNLTFRHF 217
>gi|334185340|ref|NP_188030.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332641955|gb|AEE75476.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 473
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/266 (49%), Positives = 168/266 (63%), Gaps = 27/266 (10%)
Query: 331 PFDLCPPKKGTVMLNPSLLVTNRQKRNDLK----LSIGAKSNYIEAWYGITEEVKIVKIC 386
PFD+ KK + L PS L NR+K+ K + I ++ + I +V IV C
Sbjct: 203 PFDIFLKKK-VMRLKPSFLELNREKKKAAKGFSGIVIRPGMVLLKNYLSINNQVMIVNKC 261
Query: 387 RDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQL 446
R LGLG GGFYQPG++DG L+LKMMCLGKNWD +T +YG RP DG+VPP IPVEF QL
Sbjct: 262 RQLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQTRRYGEIRPIDGSVPPRIPVEFSQL 321
Query: 447 VGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQ----------- 495
V KAI++S++L+ S K + E+P + PDIC+ NFY++TGKLGLHQ
Sbjct: 322 VEKAIKESKSLVATNSNETKGGD-EIPLLLPDICVVNFYTSTGKLGLHQVSVYDKTSFDF 380
Query: 496 ----------DKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
DK ES++S+ K LP+VSFSIGDSAEFLYGD +DV A +ILESGDVLIF
Sbjct: 381 LKYKGGYLNTDKGESKKSLRKGLPIVSFSIGDSAEFLYGDQKDVDKADTLILESGDVLIF 440
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEE 571
G +SR +FHGV I P+ +
Sbjct: 441 GERSRNVFHGVRSIRKILPPRLFFRK 466
>gi|168038958|ref|XP_001771966.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676748|gb|EDQ63227.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 253
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 169/256 (66%), Gaps = 15/256 (5%)
Query: 342 VMLNPSLLVTNRQKRNDLKL-SIGAKSNY------IEAWYGITEEVKIVKICRDLGLGPG 394
+ML PSLL Q R DL L SI + + ++ W I ++V+IV+ C LG G G
Sbjct: 1 IMLAPSLL---DQNRPDLALPSIWSDTVLMPGMVLLKGWLSIDDQVEIVRECSTLGRGYG 57
Query: 395 GFYQPGYRDGANLYLKMMCLGK-NWDPETSQYGTSRPT-DGAVPPIIPVEFHQLVGKAIQ 452
GFYQP + DG ++ L+MMCLGK +WD T+ Y R D A PP IP +F LV +++Q
Sbjct: 58 GFYQPTFADGRHMRLQMMCLGKKHWDATTNSYVPRRQNHDNATPPAIPEKFSDLVKRSLQ 117
Query: 453 DSRALIEK---ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLP 509
++ L K + GRK +E ELP M P +CI NFY TG LG+HQDKDES S+ + P
Sbjct: 118 RAQDLALKAGGLKLGRKQVEGELPNMDPTVCIVNFYEQTGALGMHQDKDESAASLKRGSP 177
Query: 510 VVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLL 569
VVSFS+GDS F YG RD A+K+ LESGDVLIFGG SR IFHGVE I P +APK L+
Sbjct: 178 VVSFSVGDSGIFAYGKERDPQKAEKISLESGDVLIFGGPSRMIFHGVESIIPKSAPKELI 237
Query: 570 EETSMRRGRLNLTFRQ 585
++T++++GRLNLTFR+
Sbjct: 238 DKTNIKQGRLNLTFRE 253
>gi|9294639|dbj|BAB02978.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 168/278 (60%), Gaps = 39/278 (14%)
Query: 331 PFDLCPPKKGTVMLNPSLLVTNRQKRNDLK----LSIGAKSNYIEAWYGITEEVKIVKIC 386
PFD+ KK + L PS L NR+K+ K + I ++ + I +V IV C
Sbjct: 48 PFDIFLKKK-VMRLKPSFLELNREKKKAAKGFSGIVIRPGMVLLKNYLSINNQVMIVNKC 106
Query: 387 RDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQL 446
R LGLG GGFYQPG++DG L+LKMMCLGKNWD +T +YG RP DG+VPP IPVEF QL
Sbjct: 107 RQLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQTRRYGEIRPIDGSVPPRIPVEFSQL 166
Query: 447 VGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLH------------ 494
V KAI++S++L+ S K + E+P + PDIC+ NFY++TGKLGLH
Sbjct: 167 VEKAIKESKSLVATNSNETKGGD-EIPLLLPDICVVNFYTSTGKLGLHQVVTSIQYRKNC 225
Query: 495 ---------------------QDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
QDK ES++S+ K LP+VSFSIGDSAEFLYGD +DV A
Sbjct: 226 SSLYYCSFKFLHHQLIESFMAQDKGESKKSLRKGLPIVSFSIGDSAEFLYGDQKDVDKAD 285
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
+ILESGDVLIFG +SR +FHGV I P+ +
Sbjct: 286 TLILESGDVLIFGERSRNVFHGVRSIRKILPPRLFFRK 323
>gi|297806029|ref|XP_002870898.1| hypothetical protein ARALYDRAFT_907969 [Arabidopsis lyrata subsp.
lyrata]
gi|297316735|gb|EFH47157.1| hypothetical protein ARALYDRAFT_907969 [Arabidopsis lyrata subsp.
lyrata]
Length = 390
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/269 (48%), Positives = 170/269 (63%), Gaps = 40/269 (14%)
Query: 329 DKPFDLCPPKKGTVMLNPSLL---------VTNRQK--RNDLKLSIGAKSNYIEAWYGIT 377
D PFD+C T + + +L V+N+ + R + L G S+ I+
Sbjct: 151 DPPFDICSSVLDTSINDWALADETNGETVEVSNKHRVLRPGMVLLKGFLSHDIQ------ 204
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPP 437
V IVK CR+LG+ P GFYQPGYR G+ L+L+MMCLG+NWDP+T +YG + D
Sbjct: 205 --VDIVKTCRELGVKPAGFYQPGYRVGSKLHLQMMCLGRNWDPQT-KYGENTDIDSKAAD 261
Query: 438 IIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDK 497
I PV F LV +AI+++ ALI++ +G +D E LP MSPDICI NFYS TG+LGLHQD+
Sbjct: 262 I-PVAFSVLVEEAIREAHALIDR-ESGTEDAERILPVMSPDICIVNFYSETGRLGLHQDR 319
Query: 498 DESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVE 557
DESQESI K LP+VSFS+GDSAEFLYG+ RDV A+ V HGV+
Sbjct: 320 DESQESIVKGLPIVSFSVGDSAEFLYGEKRDVEEAQGV------------------HGVK 361
Query: 558 KIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
I P++AP SLL E+++R GRLNLTFR +
Sbjct: 362 SIIPNSAPMSLLNESNLRTGRLNLTFRHF 390
>gi|302838827|ref|XP_002950971.1| hypothetical protein VOLCADRAFT_101962 [Volvox carteri f.
nagariensis]
gi|300263666|gb|EFJ47865.1| hypothetical protein VOLCADRAFT_101962 [Volvox carteri f.
nagariensis]
Length = 250
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 143/218 (65%), Gaps = 7/218 (3%)
Query: 370 IEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSR 429
++ + + E+++IV R+LG+GPGGFY P Y GA L L+MMC+G +W+P TS+Y +R
Sbjct: 32 LKGYLTMDEQIRIVLQIRELGVGPGGFYTPSYNTGARLSLRMMCMGLHWEPRTSKYEATR 91
Query: 430 PT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSAT 488
+ DGA PP IP +L G R L + +LP + PDIC+ANFY +
Sbjct: 92 SSYDGATPPPIPSWLVELCG------RCLGAASAAAAAAGGIQLPPLRPDICLANFYERS 145
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGK 548
G+LG+HQDKDE +S+ LPVVS S+GD+A+FLYG R+ A V LESGDVL+FGG
Sbjct: 146 GRLGMHQDKDEMPDSLRAGLPVVSLSLGDAADFLYGRTREAEQASSVRLESGDVLVFGGP 205
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
R IFH V ++ P TAP+ LL T +R GRLNLTFRQY
Sbjct: 206 GRMIFHSVSRVHPHTAPRELLAATGLRPGRLNLTFRQY 243
>gi|348667603|gb|EGZ07428.1| hypothetical protein PHYSODRAFT_319290 [Phytophthora sojae]
Length = 291
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPT-DGAVP 436
E+ ++V R +G+G GGFY+P Y GA L MCLG++W+ +T +Y R D A
Sbjct: 84 EQQELVDDSRRMGMGEGGFYKPTYASGAKCRLHQMCLGRHWNVKTEKYEQRRSNHDNAPV 143
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P + + ++++ +R + ++ K M+PDIC+ NFY G+ G+H D
Sbjct: 144 PPLPESWKKCAQRSLEAAREIDPQVMGTCKH-------MTPDICVVNFYKKAGRNGMHVD 196
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVI-LESGDVLIFGGKSRRIFH 554
KDES E++ PV+SFSIG +AEF Y D + A ++ L SGD L+FGG +R++ H
Sbjct: 197 KDESDEAMSMGSPVISFSIGCAAEFAYIDHYPEPHEAVPIVRLGSGDALVFGGPARKVVH 256
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
+ +++ +T PK L MR GRLNLTFR+Y
Sbjct: 257 ALTRVYNNTQPKWL----RMRSGRLNLTFREY 284
>gi|108711753|gb|ABF99548.1| oxidoreductase, 2OG-Fe oxygenase family protein, putative,
expressed [Oryza sativa Japonica Group]
Length = 344
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 12/176 (6%)
Query: 331 PFDLCPPK--KGTVMLNPSLLVTNRQKRNDL-KLSI-GAKSNYIEAWYGIT-------EE 379
PFD+C + K ++ L+ SLL NR+KR + +LS A Y+ + ++
Sbjct: 106 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQ 165
Query: 380 VKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPII 439
V I++ C+ LG+G GGFY PGYRDG L L+MMCLGKNWDP + YG +RP DGA PP I
Sbjct: 166 VDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSI 225
Query: 440 PVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQ 495
P F ++V AIQ S + + + D+E ELP +SPDIC+ NFY+++GKLGLHQ
Sbjct: 226 PEVFSKIVKDAIQASNEFLRQKARPANDVE-ELPPLSPDICLVNFYTSSGKLGLHQ 280
>gi|285808284|gb|ADC35816.1| unknown protein [uncultured bacterium 66]
Length = 210
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 125/229 (54%), Gaps = 25/229 (10%)
Query: 359 LKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
++L+ GA ++ + + ++ I C DLG GFY P R + + M+CLG++W
Sbjct: 6 VELAPGAM--HLTRYLTLDDQRAIAGTCLDLGAADAGFYTPIVRGEHPMSVCMLCLGRHW 63
Query: 419 DPETSQYGTSRP-TDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP 477
+ T Y R DG P +P EF ++ R+ A ++P
Sbjct: 64 NARTYAYEAVRTDADGRPAPPLPAEF-----------------VAIARQAAAAAGFTVTP 106
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
D CI N+Y A ++GLHQDKDES ESI + LPVVSFSIG++A FL G LR + ++L
Sbjct: 107 DTCIVNWYGAASRMGLHQDKDESPESIAEGLPVVSFSIGNTARFLLGGLRRRDPLQTLLL 166
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
ESGD +FGG SR +HGV +I TAP L E GRLNLTFR++
Sbjct: 167 ESGDAFVFGGPSRLRYHGVTRILAGTAPAGLPFE-----GRLNLTFRKF 210
>gi|301110256|ref|XP_002904208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096334|gb|EEY54386.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 292
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 14/212 (6%)
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPT-DGAVP 436
E+ ++V R +GLG GGFY+P Y GA L MCLG++W+ +T +Y R D A
Sbjct: 85 EQQELVDDSRCMGLGEGGFYKPTYASGAKCRLHQMCLGRHWNVKTEKYEDQRSNYDYAPI 144
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
+P + +++ D+ I+ + G M+PDIC+ NFY G+ G+H D
Sbjct: 145 RTLPDSWKTYAQRSL-DAAKKIDPLVMG------SCKKMTPDICVVNFYKKAGRNGMHID 197
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVI-LESGDVLIFGGKSRRIFH 554
KDES E++ PV+SFS+G +AEF Y D D A ++ LESGD L+FGG +R + H
Sbjct: 198 KDESDEAMSMGSPVISFSVGCAAEFAYIDHYPDPHEAVPIVRLESGDALVFGGPARTVVH 257
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
+ +++ +T P L MR GRLNLTFR+Y
Sbjct: 258 ALTRVYNNTQPSWL----RMRSGRLNLTFREY 285
>gi|285808530|gb|ADC36052.1| hypothetical protein [uncultured bacterium 213]
Length = 205
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 23/212 (10%)
Query: 376 ITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAV 435
I E+ + CR L GP Y P R G ++++M+CLG++W+ +T +Y R A
Sbjct: 16 IDEQRALADRCRALIDGPVPGYVPTVRGGGKMHVRMLCLGRHWNGQTYRYEPVRTDFDAQ 75
Query: 436 P-PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLH 494
P P +P E RAL +I+ EA + + D+CI N+Y G++GLH
Sbjct: 76 PAPPLPDEL-----------RALARRIAA-----EAGM-ALEADLCILNYYDNEGRMGLH 118
Query: 495 QDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFH 554
QDKDES S+ +PVVS SIGD+A FL+G ++ + + L SGD +FGG +R +H
Sbjct: 119 QDKDESAASLAAGVPVVSVSIGDTARFLFGGMKRRDPVEVLPLASGDAFVFGGPARLRYH 178
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQY 586
GV +I P T+P +L + GR NLTFRQY
Sbjct: 179 GVSRILPGTSPAALGVQ-----GRFNLTFRQY 205
>gi|384153724|ref|YP_005536540.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
gi|340531878|gb|AEK47083.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
Length = 208
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 41/231 (17%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYR-----DGANLYLKMMCL 414
+ I + ++ W G E+ ++V CR PGYR +G + +K +CL
Sbjct: 9 RAEIAPGAVHLPGWLGFDEQRELVAACRG---------WPGYRHTRLPNGGVMSVKSVCL 59
Query: 415 GKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPC 474
G++W P YG SR T G P++P F +G L + T AE
Sbjct: 60 GRHWYP----YGYSR-TTGEGTPVLP--FPDWLGD-------LGRRALTAAYGEPAE--A 103
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-K 533
+PD+ + NFY AT K+GLHQDKDE S++ PVVS S+GD+ F +G+
Sbjct: 104 YAPDVALVNFYDATAKMGLHQDKDE--RSLE---PVVSVSLGDACVFRFGNTETRGRPYT 158
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGDV +FGG SR +HGV K P TA +L GRLN+T R
Sbjct: 159 DVELRSGDVFVFGGPSRLAYHGVPKTLPGTADPAL-----GLAGRLNITLR 204
>gi|300790197|ref|YP_003770488.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32]
gi|399542076|ref|YP_006554739.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
gi|299799711|gb|ADJ50086.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32]
gi|398322846|gb|AFO81793.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
Length = 209
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 41/231 (17%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYR-----DGANLYLKMMCL 414
+ I + ++ W G E+ ++V CR PGYR +G + +K +CL
Sbjct: 10 RAEIAPGAVHLPGWLGFDEQRELVAACRG---------WPGYRHTRLPNGGVMSVKSVCL 60
Query: 415 GKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPC 474
G++W P YG SR T G P++P F +G L + T AE
Sbjct: 61 GRHWYP----YGYSR-TTGEGTPVLP--FPDWLGD-------LGRRALTAAYGEPAE--A 104
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-K 533
+PD+ + NFY AT K+GLHQDKDE S++ PVVS S+GD+ F +G+
Sbjct: 105 YAPDVALVNFYDATAKMGLHQDKDE--RSLE---PVVSVSLGDACVFRFGNTETRGRPYT 159
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGDV +FGG SR +HGV K P TA +L GRLN+T R
Sbjct: 160 DVELRSGDVFVFGGPSRLAYHGVPKTLPGTADPAL-----GLAGRLNITLR 205
>gi|271965860|ref|YP_003340056.1| alkylated DNA repair protein [Streptosporangium roseum DSM 43021]
gi|270509035|gb|ACZ87313.1| alkylated DNA repair protein [Streptosporangium roseum DSM 43021]
Length = 213
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W + ++V+ CR P G + G + ++ +CLG+ W
Sbjct: 12 RAEIAPGAVHVPDWLSPARQRQLVRACRAWARPPLGMERIRLPGGGLMSVRTVCLGRRWR 71
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P R TD V P+ P +L RA + + G + PD+
Sbjct: 72 P-------YRYTDEPVEPL-PQWLAEL-------GRAAVAQTLGGPYE---------PDV 107
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILE 538
+ NFY +G+HQD+DE + PVVS S+GD+ F +G+ A V LE
Sbjct: 108 ALVNFYDDAATMGMHQDRDERAAA-----PVVSLSLGDACVFRFGNTATRARPWSDVRLE 162
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+ +FGG SR FHGV +I P T P L++ GRLN+T RQ
Sbjct: 163 SGDLFVFGGPSRLAFHGVRRILPGTGPHDLIQ------GRLNITLRQ 203
>gi|361068285|gb|AEW08454.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167067|gb|AFG66558.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167069|gb|AFG66559.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167071|gb|AFG66560.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167073|gb|AFG66561.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167075|gb|AFG66562.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167077|gb|AFG66563.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167079|gb|AFG66564.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167081|gb|AFG66565.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167083|gb|AFG66566.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167085|gb|AFG66567.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167087|gb|AFG66568.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167089|gb|AFG66569.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167091|gb|AFG66570.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167093|gb|AFG66571.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167095|gb|AFG66572.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
Length = 76
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 62/75 (82%)
Query: 511 VSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE 570
VSFS+GDSAEFLYG RD+ A+K++LESGDVLIFGG+SR +FHG+ + P T+PK L +
Sbjct: 1 VSFSVGDSAEFLYGTERDIDKAEKILLESGDVLIFGGESRHVFHGISHVNPHTSPKWLNQ 60
Query: 571 ETSMRRGRLNLTFRQ 585
ET +R GRLNLTFRQ
Sbjct: 61 ETRLRPGRLNLTFRQ 75
>gi|376247465|ref|YP_005139409.1| putative DNA repair protein [Corynebacterium diphtheriae HC04]
gi|376256114|ref|YP_005144005.1| putative DNA repair protein [Corynebacterium diphtheriae VA01]
gi|372114033|gb|AEX80091.1| putative DNA repair protein [Corynebacterium diphtheriae HC04]
gi|372118631|gb|AEX82365.1| putative DNA repair protein [Corynebacterium diphtheriae VA01]
Length = 230
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 29 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASGTMSAYLMSLGLHWEYRTYQY-VSQ 87
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + ++ + + + ++ A + D + N+Y
Sbjct: 88 WGGVAVPPI-PVEFSALAHEVLRAAAGVDDSLA-------AWVDSYRIDAALVNYYPLGA 139
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 140 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 194
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ DTAP + +GR+NLTFRQ
Sbjct: 195 SRDMFHSVVRLHEDTAPT----RCGVSQGRINLTFRQ 227
>gi|452958291|gb|EME63644.1| alkylated DNA repair protein [Amycolatopsis decaplanina DSM 44594]
Length = 206
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 39/229 (17%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + E+ ++V+ CR G G+ + +G + ++ +CLG +W
Sbjct: 9 RTEVAPGAVHVPGWLDLDEQRRLVEACR----GWRGYRRTRLPNGGVMSVRTVCLGWHWH 64
Query: 420 PETSQYGTSRPT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS-- 476
P Y S+ T DG+ P++P F +G GR+ + + S
Sbjct: 65 P----YRYSKVTGDGS--PVLP--FPGWLG-------------DLGRRAVSSAYGSSSYE 103
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PDI + NFY +T K+GLHQDKDE+ PVVS S+GD+ F +G+ D V
Sbjct: 104 PDIALVNFYDSTAKMGLHQDKDEASLE-----PVVSLSLGDACVFRFGNTSDRGRPYTDV 158
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG+SR FHGV K+ P TA L GRLN+T R
Sbjct: 159 DLRSGDLFVFGGESRLAFHGVPKVLPGTADPEL-----GLVGRLNITLR 202
>gi|376241795|ref|YP_005132647.1| putative DNA repair protein [Corynebacterium diphtheriae CDCE 8392]
gi|372105037|gb|AEX71099.1| putative DNA repair protein [Corynebacterium diphtheriae CDCE 8392]
Length = 246
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 45 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSGTMSAYLMSLGLHWEYRTYQY-VSQ 103
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + ++ + + + ++ A + D + N+Y
Sbjct: 104 WGGVAVPPI-PVEFSALAHEVLRAAAGVDDSLA-------AWVDSYRIDAALVNYYPLGA 155
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 156 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 210
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ DTAP + +GR+NLTFRQ
Sbjct: 211 SRDMFHSVVRLHEDTAPT----RCGVSQGRINLTFRQ 243
>gi|376253226|ref|YP_005141685.1| putative DNA repair protein [Corynebacterium diphtheriae PW8]
gi|372116310|gb|AEX68780.1| putative DNA repair protein [Corynebacterium diphtheriae PW8]
Length = 246
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 45 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSGTMSAYLMPLGLHWEYRTYQY-VSQ 103
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + ++ + + ++ A + D + N+Y
Sbjct: 104 WGGVAVPPI-PVEFSALAHEVLRAAAGVDASLA-------AWVDSYRIDAALVNYYPPGA 155
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 156 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 210
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ DTAP M +GR+NLTFRQ
Sbjct: 211 SRDMFHSVVRLHEDTAPT----RCGMSQGRINLTFRQ 243
>gi|453053797|gb|EMF01257.1| DNA repair protein [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 215
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDP 420
+ + + ++ W + ++++ CR+ P G +G + ++ +CLG +W P
Sbjct: 11 VEVAPGAVHVPGWLDEAAQQRLLRACREWARPPAGLRTVRMPNGGAMSVRTVCLGWHWYP 70
Query: 421 ETSQYGTSRPT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
YG +R DG P+ P F +G +D+ A G + DI
Sbjct: 71 ----YGYARTVVDGDGAPVKP--FPHWLGALARDAVARAYGTPPGPEPY---------DI 115
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILE 538
+ NFY A ++GLH+D DE + PVVS S+GDS F +G+ V L
Sbjct: 116 ALVNFYDAGARMGLHRDGDEKSAA-----PVVSLSLGDSCVFRFGNTETRTRPWTDVELR 170
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+ +FGG SR +HGV + FP TAP L GRLN+T R
Sbjct: 171 SGDLFVFGGPSRFAYHGVTRTFPGTAPAGLGLT-----GRLNVTLR 211
>gi|28894458|gb|AAO61205.1| putative DNA repair protein [Streptomyces hygroscopicus]
Length = 226
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+L + + ++ +W + ++ ++V CR GP G + ++ +C+G +W
Sbjct: 9 RLEVAPGAVHVPSWLTLEQQRELVLACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQ 68
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R D GA P +L +A+ D+ D E +
Sbjct: 69 P----YAYTRTADDVNGARVAEFPDWMVELGRRALVDA-----------YDDETAGEGYT 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD + NFY A KLG+HQDKDE + PVVS +IGDS F +G+ +
Sbjct: 114 PDTALINFYDAQAKLGMHQDKDERSSA-----PVVSLTIGDSCVFRFGNTETRTKPYTDL 168
Query: 537 -LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +H V +I P T + T ++ GRLN+T R
Sbjct: 169 ELASGDLFVFGGPSRYAYHAVPRILPGTGDPA----TGLKSGRLNITMR 213
>gi|375289859|ref|YP_005124399.1| putative DNA repair protein [Corynebacterium diphtheriae 241]
gi|376244692|ref|YP_005134931.1| putative DNA repair protein [Corynebacterium diphtheriae HC01]
gi|371579530|gb|AEX43197.1| putative DNA repair protein [Corynebacterium diphtheriae 241]
gi|372107322|gb|AEX73383.1| putative DNA repair protein [Corynebacterium diphtheriae HC01]
Length = 230
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 111/220 (50%), Gaps = 28/220 (12%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 29 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASGTMSAYLMSLGLHWEYRTYQY-VSQ 87
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + + + + + ++ A + D + N+Y
Sbjct: 88 WGGVAVPPI-PVEFSALAHEVLCAAAGVDDSLA-------AWVDSYRIDAALVNYYPPGA 139
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK----VILESGDVLIF 545
+G+HQD E D PVVS SIGDSA F G+ AN ++ V+L SGD ++F
Sbjct: 140 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGN---GANRQRPWQDVVLGSGDAVVF 191
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GG SR +FH V ++ DTAP + +GR+NLTFRQ
Sbjct: 192 GGPSRDMFHSVVRLHEDTAPT----RCGVSQGRINLTFRQ 227
>gi|325672978|ref|ZP_08152672.1| alkylated DNA repair protein [Rhodococcus equi ATCC 33707]
gi|325556231|gb|EGD25899.1| alkylated DNA repair protein [Rhodococcus equi ATCC 33707]
Length = 221
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTD 432
W + E+ ++V+ CRD GP G + ++ +CLG +W P
Sbjct: 22 WLDLGEQRRLVEACRDWARGPVPMRAARLPTGHAMSVQTVCLGWHWQPYRYSRIAGDAGG 81
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLG 492
G V P+ P QL +A+ D+ D A PD + NFY ++G
Sbjct: 82 GRVLPV-PEWLAQLGRRAVADA-----------YDDPAAGAAYEPDAALINFYDDAARMG 129
Query: 493 LHQDKDESQESIDKCLPVVSFSIGDSAEFLYG--DLRDVANAKKVILESGDVLIFGGKSR 550
+H+D++E ++ PVVS SIGD+ F +G D R V L+SGD+ +FGG SR
Sbjct: 130 MHRDQEERADA-----PVVSLSIGDTCTFRFGNPDTR-TKPYTDVELQSGDLFVFGGPSR 183
Query: 551 RIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+HGV K+FP TA + + GRLN+T R
Sbjct: 184 FAYHGVPKVFPGTADP----DCGLTAGRLNITLR 213
>gi|409191810|gb|AFV30255.1| 2OG-Fe(II) oxygenase [Streptomyces sp. LZ35]
Length = 226
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+L + + ++ W + ++ ++V CR GP G + ++ +C+G +W
Sbjct: 9 RLEVAPGAVHVPGWLTLEQQRELVLACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQ 68
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R D GA P +L +A+ D+ D E +
Sbjct: 69 P----YAYTRTADDVNGARVAEFPDWMVELGRRALVDA-----------YDDETAGEGYT 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD + NFY A KLG+HQDKDE + PVVS +IGDS F +G+ +
Sbjct: 114 PDTALINFYDAQAKLGMHQDKDERSSA-----PVVSLTIGDSCVFRFGNTETRTKPYTDL 168
Query: 537 -LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +H V +I P T + T ++ GRLN+T R
Sbjct: 169 ELASGDLFVFGGPSRYAYHAVPRILPGTGDPA----TGLKSGRLNITMR 213
>gi|376286665|ref|YP_005159231.1| putative DNA repair protein [Corynebacterium diphtheriae BH8]
gi|371583999|gb|AEX47664.1| putative DNA repair protein [Corynebacterium diphtheriae BH8]
Length = 246
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 45 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSGTMSAYLMSLGLHWEYRTYQY-VSQ 103
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + ++ + + + A + D + N+Y
Sbjct: 104 WGGVAVPPI-PVEFSALAHEILRTAAGV-------DASLAAWVDSYRIDAALVNYYPPGA 155
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 156 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 210
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ DTAP + +GR+NLTFRQ
Sbjct: 211 SRDMFHSVVRLHEDTAPT----RCGVSQGRINLTFRQ 243
>gi|294814440|ref|ZP_06773083.1| Putative DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|326442830|ref|ZP_08217564.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|294327039|gb|EFG08682.1| Putative DNA repair protein [Streptomyces clavuligerus ATCC 27064]
Length = 255
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 38/236 (16%)
Query: 359 LKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
+ + I + ++ W + + ++V CR GP G + ++ +CLG +W
Sbjct: 44 VPVEIAPGAVHVPGWLTVERQRRLVDACRGWARGPVPMRHTVLPGGGVMSVRTVCLGWHW 103
Query: 419 DPETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP-- 473
P Y SR D GA P +P G RA + + A P
Sbjct: 104 QP----YRYSRTADDVNGARPAPLP-------GWLAGWGRAAV---------LAAHGPDG 143
Query: 474 ---CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD + NFY ++G+HQD++E + PVVS S+GD F +G+ R
Sbjct: 144 GGSAYAPDTALINFYDDGARMGMHQDREERSAA-----PVVSLSVGDRCVFRFGNTRTRG 198
Query: 531 NAK-KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L SGD+ +FGG SR +HGV K++P TA + T +R GRLNLT R+
Sbjct: 199 RPYLDVELASGDLFVFGGPSRAAYHGVPKVYPGTA----VPGTGIRSGRLNLTLRE 250
>gi|375292070|ref|YP_005126609.1| putative DNA repair protein [Corynebacterium diphtheriae INCA 402]
gi|376283642|ref|YP_005156852.1| putative DNA repair protein [Corynebacterium diphtheriae 31A]
gi|371577157|gb|AEX40825.1| putative DNA repair protein [Corynebacterium diphtheriae 31A]
gi|371581741|gb|AEX45407.1| putative DNA repair protein [Corynebacterium diphtheriae INCA 402]
Length = 230
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 28/220 (12%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 29 WMGLEQQFAVVQQCREIARSVAGTPLAMHRQQWASGTMSAYLMSLGLHWEYRTYQY-VSQ 87
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + ++ + + + ++ A + D + N+Y
Sbjct: 88 WGGMAVPPI-PVEFSALAHEVLRAAAGVDDSLA-------AWVDSYRIDAALVNYYPPGA 139
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK----VILESGDVLIF 545
+G+HQD E D PVVS SIGDSA F G+ AN ++ V+L SGD ++F
Sbjct: 140 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGN---GANRQRPWQDVVLGSGDAVVF 191
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GG SR +FH V ++ TAP + +GR+NLTFRQ
Sbjct: 192 GGPSRDMFHSVVRLHEGTAPT----RCGVSQGRINLTFRQ 227
>gi|345012835|ref|YP_004815189.1| 2OG-Fe(II) oxygenase [Streptomyces violaceusniger Tu 4113]
gi|344039184|gb|AEM84909.1| 2OG-Fe(II) oxygenase [Streptomyces violaceusniger Tu 4113]
Length = 230
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+L + + ++ W + ++ ++V CR GP G + ++ +C+G +W
Sbjct: 9 RLEVAPGAVHVPGWLTLEQQRELVIACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQ 68
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R D GA P +L +A+ D+ D E +
Sbjct: 69 P----YAYTRTADDVNGARVAEFPHWMVELGRRALADA-----------YDDETAGEGYA 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD + NFY A KLG+HQDKDE + PVVS +IGD F +G+ +
Sbjct: 114 PDTALINFYDAQAKLGMHQDKDERSSA-----PVVSLTIGDGCVFRFGNTETRTKPYTDL 168
Query: 537 -LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +H V KI P T + T ++ GRLN+T R
Sbjct: 169 ELGSGDLFVFGGPSRYAYHAVPKILPGTGDPA----TGLKSGRLNITMR 213
>gi|312141760|ref|YP_004009096.1| alkylated DNA repair protein [Rhodococcus equi 103S]
gi|311891099|emb|CBH50418.1| alkylated DNA repair protein [Rhodococcus equi 103S]
Length = 221
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ ++ + + W + E+ ++V+ CRD GP G + ++ +CLG +W
Sbjct: 9 RRTVADGAVLVPDWLDLGEQRRLVEACRDWARGPVPMRAARLPTGHAMSVQTVCLGWHWQ 68
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P G V P+ P QL +A+ D+ D A PD
Sbjct: 69 PYRYSRIAGDAGGGRVLPV-PEWLVQLGRRAVTDA-----------YDDPAAGAAYEPDA 116
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG--DLRDVANAKKVIL 537
+ NFY ++G+H+D++E ++ PVVS SIGD+ F +G D R V L
Sbjct: 117 ALINFYDDAARMGMHRDQEERADA-----PVVSLSIGDTCTFRFGNPDTR-TKPYTDVEL 170
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+SGD+ +FGG SR +HGV K+FP TA + + GRLN+T R
Sbjct: 171 QSGDLFVFGGPSRFAYHGVPKVFPGTADP----DCGLTAGRLNITLR 213
>gi|254391422|ref|ZP_05006625.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|197705112|gb|EDY50924.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
Length = 224
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 38/236 (16%)
Query: 359 LKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
+ + I + ++ W + + ++V CR GP G + ++ +CLG +W
Sbjct: 13 VPVEIAPGAVHVPGWLTVERQRRLVDACRGWARGPVPMRHTVLPGGGVMSVRTVCLGWHW 72
Query: 419 DPETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP-- 473
P Y SR D GA P +P G RA + + A P
Sbjct: 73 QP----YRYSRTADDVNGARPAPLP-------GWLAGWGRAAV---------LAAHGPDG 112
Query: 474 ---CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD + NFY ++G+HQD++E + PVVS S+GD F +G+ R
Sbjct: 113 GGSAYAPDTALINFYDDGARMGMHQDREERSAA-----PVVSLSVGDRCVFRFGNTRTRG 167
Query: 531 NAK-KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L SGD+ +FGG SR +HGV K++P TA + T +R GRLNLT R+
Sbjct: 168 RPYLDVELASGDLFVFGGPSRAAYHGVPKVYPGTA----VPGTGIRSGRLNLTLRE 219
>gi|297561490|ref|YP_003680464.1| 2OG-Fe(II) oxygenase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296845938|gb|ADH67958.1| 2OG-Fe(II) oxygenase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 236
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 22/231 (9%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
+ + ++ W G E+ +V+ CRD GP G + G + ++M+ LG +W P
Sbjct: 13 VAPGAVHVPGWLGPEEQADLVRRCRDWARGPAGMRRHTMPRGGVMSVRMVSLGWHWSPGP 72
Query: 423 SQYGTSRPTDGAVPPIIPVEFHQLV--GKAIQDSRALIEKISTGRKDIEAEL-----PCM 475
+ + R G + +L+ G +Q L+ ++ + +EA P
Sbjct: 73 NPHAERR-GPGPSRHRQAYSYARLLPDGTPVQPFPDLLGDLAA--RAVEAAYGAPPGPDA 129
Query: 476 SP-DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P D+ + NFY A ++G+HQD+DE PVVS S+GD+ F +G+
Sbjct: 130 DPYDVALVNFYDADARMGMHQDRDELSAE-----PVVSLSLGDTCVFRFGNTETRNRPHT 184
Query: 535 -VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGD+ +FGG SR +HGV + P TAP +L + GRLN+T R
Sbjct: 185 DVELRSGDLFVFGGPSRMAYHGVPRTRPRTAPPALGLD-----GRLNITVR 230
>gi|291300775|ref|YP_003512053.1| 2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
gi|290569995|gb|ADD42960.1| 2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 362 SIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPE 421
+I + ++ W + + +V CRD P G + G + ++ +CLG +W P
Sbjct: 10 TIAPGAVHVPGWLTRSAQRDLVAACRDWSRPPAGMTRVKTPGGRWMSVRQVCLGLHWTP- 68
Query: 422 TSQYGTSRP-TDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDIC 480
Y SR TDG+ P ++ L D + +PDI
Sbjct: 69 ---YRYSRTHTDGSHVKAFP-----------EELARLAVAAVATAYDDPGDY---APDIA 111
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILES 539
+ N+Y + ++G+HQDK+E ++ PVVS S+GDS F +G+ + V LES
Sbjct: 112 LINYYDSAARMGMHQDKEEHCDA-----PVVSLSLGDSCVFRFGNTENRNKPWTDVTLES 166
Query: 540 GDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GD+ +FGG+SR FHGV K P T P + M GRLN+T RQ
Sbjct: 167 GDLFVFGGESRFAFHGVPKTMPGTGPSDI----DMGAGRLNITIRQ 208
>gi|38232761|ref|NP_938528.1| DNA repair protein [Corynebacterium diphtheriae NCTC 13129]
gi|38199019|emb|CAE48637.1| Putative DNA repair protein [Corynebacterium diphtheriae]
Length = 246
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRD---GANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 45 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASGTMSAYLMSLGLHWEYRTYQY-VSQ 103
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + ++ + + + ++ A + D + N+Y
Sbjct: 104 WGGVAVPPI-PVEFSALAHEVLRAAAGVDDSLA-------AWVDSYRIDAALVNYYPPGA 155
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 156 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 210
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ TAP + +GR+NLTFRQ
Sbjct: 211 SRDMFHSVVRLHAGTAPT----RCGVSQGRINLTFRQ 243
>gi|302562052|ref|ZP_07314394.1| DNA repair protein [Streptomyces griseoflavus Tu4000]
gi|302479670|gb|EFL42763.1| DNA repair protein [Streptomyces griseoflavus Tu4000]
Length = 219
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 30/226 (13%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W G E+ ++++ CR P G G + + +CLG +W P
Sbjct: 16 IAPGAVHLPDWLGAEEQRELLRECRGWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 73
Query: 423 SQYGTSRPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
YG +R DGA P +L +A+ D+ + +D + DI
Sbjct: 74 --YGYARTVVDGDGAPVKPFPARLGELGRRAVADALG-----APAARDA-------AYDI 119
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILE 538
+ NFY A ++G+H+D DE ++ PVVS S+GD+ F +G R V L
Sbjct: 120 ALVNFYDADARMGMHRDSDEQADA-----PVVSLSLGDTCVFRFGTTRGRTRPWTDVELR 174
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+ +FGG SR +HGV ++ P TAP L GRLN+T R
Sbjct: 175 SGDLFVFGGPSRLAYHGVPRVHPGTAPPELGLT-----GRLNVTLR 215
>gi|345001463|ref|YP_004804317.1| 2OG-Fe(II) oxygenase [Streptomyces sp. SirexAA-E]
gi|344317089|gb|AEN11777.1| 2OG-Fe(II) oxygenase [Streptomyces sp. SirexAA-E]
Length = 230
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 36/225 (16%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V+ CR+ GP G + ++ +CLG +W P Y +
Sbjct: 31 HVPGWLPEERQRELVEACREWARGPVPLRNTVLPGGGVMSVRTVCLGWHWQP----YRYA 86
Query: 429 RPTD---GA----VPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICI 481
R D GA P + V +A +D+ + AE +PD +
Sbjct: 87 RTADDVNGARVAPFPEWLAAWGRAAVAEAYEDA-------------VAAE--AYAPDTAL 131
Query: 482 ANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESG 540
NFY ++G+HQDK+E + PVVS S+GD+ F +G+ +D V L SG
Sbjct: 132 VNFYDGAARMGMHQDKEERSHA-----PVVSLSLGDTCVFRFGNPQDRGRPYTDVELASG 186
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
D+ +FGG SR FHGV ++F TA + + MR GRLN+T R+
Sbjct: 187 DLFVFGGPSRYAFHGVTRVFEGTAGAA----SGMRAGRLNVTLRE 227
>gi|296392708|ref|YP_003657592.1| DNA repair protein [Segniliparus rotundus DSM 44985]
gi|296179855|gb|ADG96761.1| putative DNA repair protein [Segniliparus rotundus DSM 44985]
Length = 224
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ ++ A + ++ W + E+ ++ + GP +G + ++ +CLG +W
Sbjct: 16 RQALPAGAVHLPGWLSLPEQARLSAEFQMWARGPVPLRAAALPNGGRMSVRTVCLGWHWQ 75
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P Y +R D V Q++ D + K PD
Sbjct: 76 P----YRYTRTADD-------VNGQQVL--PFPDWLGDLAKAVVREACGATAARTYRPDA 122
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK-VILE 538
+ N Y A ++G+HQDKDE ++ PVVS S+GDS F +G+ + V LE
Sbjct: 123 ALVNHYDAHARMGMHQDKDERTDA-----PVVSLSVGDSCVFRFGNAQGRGKPHTDVRLE 177
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD +FGG SR +HGV KIFP TAP E + RGRLN+T R
Sbjct: 178 SGDAFVFGGPSRLAYHGVPKIFPGTAP----EGCGLARGRLNITVR 219
>gi|359147424|ref|ZP_09180731.1| alkylated DNA repair protein [Streptomyces sp. S4]
Length = 219
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 26/220 (11%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V+ CR GP + G + ++ + LG +W P +Y T
Sbjct: 18 HVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSP--YRY-TR 74
Query: 429 RPTDGAVPPIIPV--EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYS 486
R D P+ P+ +L +A+ D+ + + GR PD+ + NFY
Sbjct: 75 RAGDVNGAPVAPLPEWLVELGRRAVADA---YQDEAAGR--------AYRPDVALVNFYG 123
Query: 487 ATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIF 545
A +G+HQDKDE ++ PVVS S+GD+ F G+ + + LESGD+L+F
Sbjct: 124 AGATMGMHQDKDERSDA-----PVVSLSVGDACLFRLGNTEGRGRPWQDLRLESGDLLVF 178
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GG SR +HGV K++P TA S+ T GRLNLT R+
Sbjct: 179 GGPSRFAYHGVPKVYPGTAEPSVGPAT----GRLNLTLRE 214
>gi|429198522|ref|ZP_19190344.1| putative alkylated DNA repair protein AlkB [Streptomyces ipomoeae
91-03]
gi|428665784|gb|EKX64985.1| putative alkylated DNA repair protein AlkB [Streptomyces ipomoeae
91-03]
Length = 223
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W ++ +++ CRD P G G + + +CLG +W P Y +
Sbjct: 23 HVPDWLDAEQQRRLLDACRDWARPPAGLRTVRTPGGGTMTSRQVCLGWHWYP----YAYA 78
Query: 429 RPT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSA 487
R DG P+ P F + +G+ + RA+ E E + DI + NFY A
Sbjct: 79 RTVVDGDGAPVKP--FPEWLGELGR--RAVAETFGA------KEAATAAYDIALINFYDA 128
Query: 488 TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFG 546
++G+H+D DE ++ PVVS S+GD+ F +G+ A V L SGD+ +FG
Sbjct: 129 DARMGMHRDGDEKSDA-----PVVSLSLGDTCVFRFGNTESRARPYTDVELRSGDLFVFG 183
Query: 547 GKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
G SRR +HGV ++ TAP SL GRLN+T R
Sbjct: 184 GASRRAYHGVPRVRAGTAPPSLGLA-----GRLNITLR 216
>gi|29827984|ref|NP_822618.1| DNA repair protein [Streptomyces avermitilis MA-4680]
gi|29605085|dbj|BAC69153.1| putative DNA repair protein [Streptomyces avermitilis MA-4680]
Length = 222
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 30/229 (13%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + + + CRD P G G + + +CLG +W
Sbjct: 10 RAQVAPDAVHVPDWADAGRQRRFLAACRDWARPPAGLRTVHTPGGGTMTSRQVCLGWHWY 69
Query: 420 PETSQYGTSRPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P YG +R DGA +P +L A+ D+ +P +
Sbjct: 70 P----YGYARTVVDGDGAPVKPLPDWLAELGRDAVSDALG------------PQAVPPVP 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
DI + NFY A ++G+H+D DE + PVVS S+GD+ F +G+ R V
Sbjct: 114 YDIALINFYGADARMGMHRDSDEKSGA-----PVVSLSVGDTCVFRFGNARTRTRPYTDV 168
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +HGV +++ DTAP L GRLN+T R
Sbjct: 169 ELRSGDLFVFGGASRLAYHGVPRVYADTAPPELGLV-----GRLNITLR 212
>gi|291455551|ref|ZP_06594941.1| alkylated DNA repair protein [Streptomyces albus J1074]
gi|291358500|gb|EFE85402.1| alkylated DNA repair protein [Streptomyces albus J1074]
Length = 219
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 26/220 (11%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V+ CR GP + G + ++ + LG +W P +Y T
Sbjct: 18 HVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSP--YRY-TR 74
Query: 429 RPTDGAVPPIIPV--EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYS 486
R D P+ P+ +L +A+ D+ + + GR PD+ + NFY
Sbjct: 75 RAGDVNGVPVAPLPEWLVELGRRAVADA---YQDEAAGR--------AYRPDVALVNFYG 123
Query: 487 ATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIF 545
A +G+HQDKDE ++ PVVS S+GD+ F G+ + + LESGD+L+F
Sbjct: 124 AGATMGMHQDKDERSDA-----PVVSLSVGDACLFRLGNTEGRGRPWQDLRLESGDLLVF 178
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GG SR +HGV K++P TA S+ T GRLNLT R+
Sbjct: 179 GGPSRFAYHGVPKVYPGTAEPSVGPAT----GRLNLTLRE 214
>gi|184201720|ref|YP_001855927.1| putative alkylated DNA repair protein [Kocuria rhizophila DC2201]
gi|183581950|dbj|BAG30421.1| putative alkylated DNA repair protein [Kocuria rhizophila DC2201]
Length = 236
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 112/233 (48%), Gaps = 21/233 (9%)
Query: 356 RNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQ--PGYRDGANLYLKMMC 413
R + L+ GA ++ W + + +V CRD +Q PG G + ++ +
Sbjct: 14 REPIVLAPGAV--HVPDWLPVARQHDLVAACRDWVRSAPMRHQVMPG---GGRMSVQSVM 68
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG N P +YG T GA +P L +A+ D+ +++ G ++E +
Sbjct: 69 LGVNRTP--YRYGA---TGGAEVAALPDWLVDLGARAVADAYGMVDAGDVGVPEVEDVVR 123
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD-VANA 532
PD + N+Y +G+HQDKDE + P+VS S+GD+ F +G+ A
Sbjct: 124 GFVPDSALVNYYDGAAHMGMHQDKDEFSAA-----PIVSLSLGDTCTFRFGNTETRTAPY 178
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ V L SGD+ +FGG SR FHGV K+FP T L + GRLN+T R
Sbjct: 179 RDVELRSGDLFVFGGPSRYAFHGVPKVFPGTGGLHLGLKNG---GRLNITLRM 228
>gi|363420889|ref|ZP_09308979.1| alkylated DNA repair protein [Rhodococcus pyridinivorans AK37]
gi|359735103|gb|EHK84067.1| alkylated DNA repair protein [Rhodococcus pyridinivorans AK37]
Length = 220
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 27/238 (11%)
Query: 348 LLVTNRQKRNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANL 407
L +R +R I + ++ W E+ ++V++CRD P G +
Sbjct: 4 LFSVSRPRRE-----IAPGAVHVPDWLDPGEQRELVELCRDWARPPAPMRHTLLPGGGRM 58
Query: 408 YLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKD 467
+ +CLG +W P D VPP+ P +L +A+ D+ D
Sbjct: 59 SVSTVCLGWHWSPYRYTRTAVDVDDAPVPPL-PDRLVELGRRAVADA-----------YD 106
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
A PD + NFY ++G+HQDKDE + P+VS S+GD+ F +G+
Sbjct: 107 DPAAGGGYEPDTALINFYDRDARMGMHQDKDERVSA-----PIVSLSLGDACLFRFGNTE 161
Query: 528 DVANA-KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V LES D+ +FGG SR +HGV ++PDT + GRLN+T R
Sbjct: 162 SRGRPYTDVRLESRDLFVFGGPSRFAYHGVPVVYPDTGSS----RCGLTAGRLNITLR 215
>gi|348171937|ref|ZP_08878831.1| alkylated DNA repair protein [Saccharopolyspora spinosa NRRL 18395]
Length = 215
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W + ++ ++V CR+ P G G + ++ +CLG +W
Sbjct: 9 RAEIAPGAVHLPDWLDLDQQRELVVACREWARSPAGMRSARLPSGGVMSVRTVCLGWHWY 68
Query: 420 PETSQYGTSRPTD----GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCM 475
P Y SR D AV P P L +A+ D+ + G +
Sbjct: 69 P----YRYSRTVDDGDGSAVTPF-PDWLGDLGRRALADAYG---HSAHGYR--------- 111
Query: 476 SPDICIANFYSATGKLGLHQDKDE-SQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AK 533
PD+ + NFY T ++G+HQD+DE SQE PVVS S+GD+ F +G+ +
Sbjct: 112 -PDVALVNFYDDTARMGMHQDRDEQSQE------PVVSLSLGDTCVFRFGNTENRNRPWT 164
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGDV +FGG+SR +HGV K + T P + M GRLN+T R
Sbjct: 165 DVELCSGDVFVFGGESRLAYHGVPKTYRGTGP-----DVGMTAGRLNITLR 210
>gi|408534096|emb|CCK32270.1| alkylated DNA repair protein AlkB [Streptomyces davawensis JCM
4913]
Length = 213
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ +I + ++ W + +++ CR+ P G G + + +CLG +W
Sbjct: 10 RTTIAPGAVHVPDWLDADRQRELLTACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWY 69
Query: 420 PETSQYGTSRPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P YG +R DGA +P +L +A++D+ + TG
Sbjct: 70 P----YGYARTVVDGDGAPVKPLPDWLGELARRAVRDA------LGTGTPPY-------- 111
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
DI + NFY A ++G+H+D DE ++ PVVS S+GD+ F +G+ A V
Sbjct: 112 -DIALINFYDADARMGMHRDSDEESDA-----PVVSLSLGDTCVFRFGNTETRARPYTDV 165
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +HGV ++ P T P L GRLN+T R
Sbjct: 166 ELRSGDLFVFGGASRLAYHGVPRVHPGTGPPELGLA-----GRLNVTLR 209
>gi|376250270|ref|YP_005137151.1| putative DNA repair protein [Corynebacterium diphtheriae HC03]
gi|372111774|gb|AEX77833.1| putative DNA repair protein [Corynebacterium diphtheriae HC03]
Length = 230
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 30/221 (13%)
Query: 373 WYGITEEVKIVKICRDLGLGPGG----FYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
W G+ ++ +V+ CR++ G ++ + G + +M LG +W+ T QY S
Sbjct: 29 WMGLEQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHWEYRTYQY-VS 86
Query: 429 RPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSAT 488
+ AV PI PVEF L + ++ + + + ++ A + D + N+Y
Sbjct: 87 QWGGMAVSPI-PVEFSALAHEVLRAAAGVDDSLA-------AWVDSYRIDAALVNYYPPG 138
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK----VILESGDVLI 544
+G+HQD E D PVVS SIGDSA F G+ AN ++ V+L SGD ++
Sbjct: 139 AGMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGN---GANRQRPWQDVVLGSGDAVV 190
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
FGG SR +FH V ++ TAP + +GR+NLTFRQ
Sbjct: 191 FGGPSRDMFHSVVRLHEGTAPT----RCGVSQGRINLTFRQ 227
>gi|21219556|ref|NP_625335.1| DNA repair protein [Streptomyces coelicolor A3(2)]
gi|8894829|emb|CAB96025.1| putative DNA repair protein [Streptomyces coelicolor A3(2)]
Length = 216
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTD 432
W ++ +++ CR+ P G G + + +CLG++W P T+ D
Sbjct: 23 WLSPGQQRELLDACREWARPPAGLRTVRTPGGGTMTARQVCLGRHWYPY-GYAATAVDGD 81
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP-DICIANFYSATGKL 491
GA P L +A+ D+ + AE +P DI + NFY A ++
Sbjct: 82 GAPVKPFPARLDGLARRAVTDA-------------LGAEAVAPAPYDIALINFYDADARM 128
Query: 492 GLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGGKSR 550
G+H+D DE ++ PVVS S+GD+ F +G+ L SGD+ +FGG SR
Sbjct: 129 GMHRDADERTDA-----PVVSLSLGDTCVFRFGNPETRTRPYTDTELRSGDLFVFGGPSR 183
Query: 551 RIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+HGV ++ P TAP L RGRLN+T R
Sbjct: 184 LAYHGVPRVHPGTAPPEL-----GLRGRLNITLR 212
>gi|376289303|ref|YP_005161550.1| putative DNA repair protein [Corynebacterium diphtheriae C7 (beta)]
gi|372102699|gb|AEX66296.1| putative DNA repair protein [Corynebacterium diphtheriae C7 (beta)]
Length = 221
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDG---ANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 20 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYGTMSAYLMSLGLHWEYRTYQY-VSQ 78
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + + + + + ++ A + D + N+Y
Sbjct: 79 WGGVAVPPI-PVEFSALAHEVLCAAAGVDDSLA-------AWVDSYRIDAALVNYYPPGA 130
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 131 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 185
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ TAP + +GR+NLTFRQ
Sbjct: 186 SRDMFHSVVRLHEGTAPT----RCGVSQGRINLTFRQ 218
>gi|419859769|ref|ZP_14382419.1| putative DNA repair protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983812|gb|EIK57267.1| putative DNA repair protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 230
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDG---ANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 29 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYGTMSAYLMSLGLHWEYRTYQY-VSQ 87
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + + + + + ++ A + D + N+Y
Sbjct: 88 WGGVAVPPI-PVEFSALAHEVLCAAAGVDDSLA-------AWVDSYRIDAALVNYYPPGA 139
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 140 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 194
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ TAP + +GR+NLTFRQ
Sbjct: 195 SRDMFHSVVRLHEGTAPT----RCGVSQGRINLTFRQ 227
>gi|72161831|ref|YP_289488.1| DNA-N1-methyladenine dioxygenase [Thermobifida fusca YX]
gi|71915563|gb|AAZ55465.1| DNA-N1-methyladenine dioxygenase [Thermobifida fusca YX]
Length = 230
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
++ + + ++ W + E+ +V +CR+ GPGG + R G + + M LG W
Sbjct: 10 RVEVAPGAVHVPGWLDLEEQRALVDLCREWMRGPGGMTRHRTR-GGTMSVAMTSLGWYWR 68
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P +Y + P DG + S + ++ + A P D+
Sbjct: 69 PY--RYSATLP-DG----------RPVPPLPPVLSTLALRGLAAAYGTVPAPAPAY--DV 113
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILE 538
+ NFY+AT +G+H+D DE ++ PVVS S+GD+ F +G+ V L
Sbjct: 114 ALVNFYAATATMGMHRDTDERTDA-----PVVSVSLGDTCVFRFGNTATRTRPYTDVELR 168
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+ +FGG SR +HGV ++F TA +L E+ GR+N+T R
Sbjct: 169 SGDLFVFGGPSRWAYHGVPRVFAGTANPALGLES----GRINITVR 210
>gi|448823052|ref|YP_007416217.1| hypothetical protein CU7111_0378 [Corynebacterium urealyticum DSM
7111]
gi|448276549|gb|AGE35973.1| hypothetical protein CU7111_0378 [Corynebacterium urealyticum DSM
7111]
Length = 226
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 31/238 (13%)
Query: 356 RNDLKLSIGAKSNYIEAWYGITEEVKIV----KICRDLGLGPGGFYQPGYRDGANLYLKM 411
R+D +++ G ++ W + ++ +V +I R+L P +P + G + + M
Sbjct: 8 RDDARITPGVV--HLPGWLELGQQAAVVSQLREIARELAGTPLSMSRPQLKSG-RMQVFM 64
Query: 412 MCLGKNWDPE-TSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKD--I 468
+ LG+ W E T +Y T G P +P ++ +A+ S GR D +
Sbjct: 65 LHLGRMWVTEPTYRYVTH--VAGHRVPQVPENLAEIARQAL---------TSAGRHDATL 113
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
A PD+ + N+Y +G+HQD++E + PVVS SIGD A F G +
Sbjct: 114 SAWADTFRPDMALVNYYPPGATMGMHQDRNE-----NSLAPVVSLSIGDEALFRIGSTKT 168
Query: 529 VAN-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L SGDV++FGG R FHGV P T P++L + ++ GR+N+TFRQ
Sbjct: 169 RNQPWDEVTLISGDVIVFGGPKRLAFHGV----PQTRPETLPDGCGLKEGRINITFRQ 222
>gi|376292249|ref|YP_005163923.1| putative DNA repair protein [Corynebacterium diphtheriae HC02]
gi|372109572|gb|AEX75632.1| putative DNA repair protein [Corynebacterium diphtheriae HC02]
Length = 246
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDG---ANLYLKMMCLGKNWDPETSQYGTSR 429
W G+ ++ +V+ CR++ G +R + +M LG +W+ T QY S+
Sbjct: 45 WMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYGTMSAYLMSLGLHWEYRTYQY-VSQ 103
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
AVPPI PVEF L + + + + + ++ A + D + N+Y
Sbjct: 104 WGGVAVPPI-PVEFSALAHEVLCAAAGVDDSLA-------AWVDSYRIDAALVNYYPLGA 155
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANAKKVILESGDVLIFGGK 548
+G+HQD E D PVVS SIGDSA F G+ + + V+L SGD ++FGG
Sbjct: 156 GMGMHQDAFE-----DSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGP 210
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +FH V ++ TAP + +GR+NLTFRQ
Sbjct: 211 SRDMFHSVVRLHEGTAPT----RCGVSQGRINLTFRQ 243
>gi|357402536|ref|YP_004914461.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386358611|ref|YP_006056857.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337768945|emb|CCB77658.1| putative DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365809119|gb|AEW97335.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 216
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W G E+ +++ CR P G +G + ++ +CLG +W
Sbjct: 10 RAEIAPGAVHVPGWLGPDEQRRLLADCRAWARPPAGLRTVTMPNGGRMSVRSVCLGWHWY 69
Query: 420 PETSQYGTSRPT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP- 477
P YG +R DG P+ P F +G + RA+ E PC P
Sbjct: 70 P----YGYARTVVDGDGAPVKP--FPAPLGDLAR--RAVTEAYGE---------PCAEPY 112
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDL-RDVANAKKVI 536
DI + NFY +G+H+D DE + PVVS S+GD+ F +G+ V
Sbjct: 113 DIALVNFYGEGAAMGMHRDADERSAA-----PVVSLSLGDACVFRFGNPGTRTRPWTDVE 167
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +HGV + P TAP +L GRLN+T R
Sbjct: 168 LRSGDLFVFGGPSRLAYHGVPRTRPGTAPPALGLT-----GRLNITLR 210
>gi|408680041|ref|YP_006879868.1| Alkylated DNA repair protein AlkB [Streptomyces venezuelae ATCC
10712]
gi|328884370|emb|CCA57609.1| Alkylated DNA repair protein AlkB [Streptomyces venezuelae ATCC
10712]
Length = 207
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 39/230 (16%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ +I + ++ W + ++V CR+ G GP + Q G + ++ +CLG+ W
Sbjct: 10 RATIAPGAVHVPGWLPAARQRELVDACREWGRGPLPYRQTVLPGGGVMSVRSLCLGRRW- 68
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKD-IEA--ELPCMS 476
+P + VG + D ++ GR+ +EA + +
Sbjct: 69 -------------------VPYRYLDAVGVPLPDW-----LVALGREALVEAYGDHGGFT 104
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY+ ++G+HQD++E + PVVS S+GD F +G+ + + V
Sbjct: 105 PDTALVNFYAPGARMGMHQDREERSGA-----PVVSLSLGDRCVFRFGNEENRGRPYQDV 159
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+ +FGG SR + HGV K+FP TA +L GRLN+T R+
Sbjct: 160 ELASGDLFVFGGASRWVHHGVPKVFPGTADPAL-----GLTGRLNITLRE 204
>gi|134099909|ref|YP_001105570.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|291008697|ref|ZP_06566670.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|133912532|emb|CAM02645.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
Length = 217
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W ++ +V+ CR+ GP G +GA + + +CLG +W
Sbjct: 8 RTELAPGAVHVPDWLDPGQQRMLVRACREWATGPAGMRAARMPNGAVMSARTVCLGWHWY 67
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y SR D G+ P L +A+ D+ D +A
Sbjct: 68 P----YRYSRTLDDQDGSPVKPFPSWLGDLGRRAVADAYG---------DDFDAA--DYR 112
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKV 535
PD+ + N+Y + ++GLHQDKDE PVVS S+GD+ F G+ + V
Sbjct: 113 PDVALINYYDDSARMGLHQDKDERAPD-----PVVSLSLGDTGMFRLGNTENRNRPWTDV 167
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+L+FGG SR +HGV +I P T + + RGRLN+T R
Sbjct: 168 ELCSGDLLVFGGPSRMAYHGVLRILPGTREPDI----GLDRGRLNITMR 212
>gi|374983639|ref|YP_004959134.1| alkylated DNA repair protein [Streptomyces bingchenggensis BCW-1]
gi|297154291|gb|ADI04003.1| alkylated DNA repair protein [Streptomyces bingchenggensis BCW-1]
Length = 208
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++ ++V CR GP + G + ++ +C+G +W P Y S
Sbjct: 2 HVPDWLTLQQQRELVAACRAWAQGPVPIRRTRLPSGGVMSVQTVCVGWHWLP----YRYS 57
Query: 429 RPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R D GA P +L RAL E R+++ + +PD + NFY
Sbjct: 58 RTADDVNGARAAEFPGWMVEL------GRRALAEAYQNKREEMASA--DYTPDTALINFY 109
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI-LESGDVLI 544
KLG+HQDKDE + PVVS SIGD+ F G+ I L SGD+ +
Sbjct: 110 DGQAKLGMHQDKDEKSAA-----PVVSLSIGDTCVFRVGNTATRTKPYTDIELASGDLFV 164
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
FGG SR ++HGV K+ T + T +R GRLN+ R
Sbjct: 165 FGGPSRYVYHGVPKVHEGTGDPA----TGLRTGRLNIAMR 200
>gi|213964981|ref|ZP_03393180.1| DNA-N1-methyladenine dioxygenase [Corynebacterium amycolatum SK46]
gi|213952517|gb|EEB63900.1| DNA-N1-methyladenine dioxygenase [Corynebacterium amycolatum SK46]
Length = 224
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 28/243 (11%)
Query: 349 LVTNRQKRNDLKLSIGAKSNYIEAWYGITEE----VKIVKICRDLGLGPGGFYQPGYRDG 404
++ ++ R+D +++ G ++ W + ++ ++ I RDL P +P + G
Sbjct: 1 MLFDQLPRHDARITPGVV--HLPGWLTLDQQSGTITQLRDIARDLAGTPLAMTRPQLKSG 58
Query: 405 ANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTG 464
+ + M+ LG+ W +Y T G P +P +L +A+ + E +S
Sbjct: 59 -QMQVFMLHLGRMWATNPYRYVTH--AGGIRVPPVPDNLLELATEALGAAALYDESLS-- 113
Query: 465 RKDIEAELP-CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLY 523
+ P PD+ + N+Y +G+HQD++E+ + P+VS SIGD A F
Sbjct: 114 ------QWPSTFRPDMALVNYYPPGATMGMHQDRNENSSA-----PIVSLSIGDEALFRI 162
Query: 524 GDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLT 582
G + + V L SGDV++FGG R FHGV P T P +L E ++ GR+N+T
Sbjct: 163 GGTENRSKPWDDVTLASGDVIVFGGPKRLAFHGV----PKTRPGTLPEACGLKEGRINIT 218
Query: 583 FRQ 585
FRQ
Sbjct: 219 FRQ 221
>gi|256831645|ref|YP_003160372.1| 2OG-Fe(II) oxygenase [Jonesia denitrificans DSM 20603]
gi|256685176|gb|ACV08069.1| 2OG-Fe(II) oxygenase [Jonesia denitrificans DSM 20603]
Length = 231
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 359 LKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
++ I + ++ W I ++ + + C GP R G + +K +C+G +W
Sbjct: 11 VREEIAPGAVWLPGWLTIPQQAWLARQCAQWAAGPVPIRSATVR-GHPMSVKTVCVGWHW 69
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
P Y SR + VEF + + ++ R ++ +TG +D +PD
Sbjct: 70 RP----YAYSRDAVDVNGQRV-VEFPKWM---VRLGRRIVAD-ATGDED---RALAYTPD 117
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVIL 537
+ NFY ++G+HQDKDE + PVVS SIGD+ F +G+ + + + L
Sbjct: 118 TALINFYDVQARMGMHQDKDEKSLA-----PVVSLSIGDTCTFRFGNTENRNRPYRDIAL 172
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGDV +FGG SR FHGV+KI ++AP + + GR N+T R+
Sbjct: 173 ASGDVFVFGGPSRLAFHGVQKIHAESAP----DGCGVEHGRWNITMRE 216
>gi|365859924|ref|ZP_09399759.1| putative DNA repair protein [Streptomyces sp. W007]
gi|364010661|gb|EHM31566.1| putative DNA repair protein [Streptomyces sp. W007]
Length = 231
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 97/221 (43%), Gaps = 28/221 (12%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V CR GP G + ++ +CLG +W P Y +
Sbjct: 26 HVPEWLSVERRAELVAACRQWARGPVPLRHTVLPGGGVMSVRTVCLGWHWQP----YRYA 81
Query: 429 RPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R D GA P L A+ ++ E +PD + NFY
Sbjct: 82 RTADDVNGARVAAFPDWLGDLGRAAVAEA-----------YGDEGAAEAFAPDTALINFY 130
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLI 544
AT ++G+HQDK+E + PVVS SIG F +G+ V L SGD+ +
Sbjct: 131 DATARMGMHQDKEERSSA-----PVVSLSIGARCVFRFGNAEGRGRPYTDVELASGDLFV 185
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
FGG SR FHGV K++ A + +R GRLNLT R+
Sbjct: 186 FGGPSRFAFHGVPKVYAGPADPA----AGLRAGRLNLTLRE 222
>gi|302547250|ref|ZP_07299592.1| putative DNA repair protein [Streptomyces hygroscopicus ATCC 53653]
gi|302464868|gb|EFL27961.1| putative DNA repair protein [Streptomyces himastatinicus ATCC
53653]
Length = 219
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDP 420
+ I + ++ W + + ++V CR GP G + ++ +C+G +W P
Sbjct: 10 MEIAPGAVHLPGWLTLERQRELVTACRAWATGPVPIRHTRLPRGGVMSVQTVCIGWHWQP 69
Query: 421 ETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP 477
Y +R D G P QL +A+ D+ + G D +P
Sbjct: 70 ----YKYTRNADDVNGERVAAFPDWMVQLGRRALLDAYGDAQ----GAAD-------YTP 114
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI- 536
D + NFY KLG+HQDKDE + PVVS SIGD+ F G+ I
Sbjct: 115 DTALINFYDGQAKLGMHQDKDERSSA-----PVVSLSIGDTCVFRVGNTETRTKPYTDIE 169
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR ++HGV K++ TA +T + GRLN+T R
Sbjct: 170 LASGDLFVFGGPSRYVYHGVPKVYEGTADP----DTGLASGRLNITMR 213
>gi|289773256|ref|ZP_06532634.1| DNA repair protein [Streptomyces lividans TK24]
gi|289703455|gb|EFD70884.1| DNA repair protein [Streptomyces lividans TK24]
Length = 216
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYG-TSRPT 431
W ++ +++ CR+ P G G + + +CLG++W P YG +
Sbjct: 23 WLSPGQQRELLDACREWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP----YGYAATAV 78
Query: 432 DGAVPPIIP--VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP-DICIANFYSAT 488
DG P+ P L +A+ D+ + AE +P DI + NFY A
Sbjct: 79 DGDGAPVKPFLARLDDLARRAVTDA-------------LGAEGVAPAPYDIALINFYDAD 125
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGG 547
++G+H+D DE ++ PVVS S+GD+ F +G+ L SGD+ +FGG
Sbjct: 126 ARMGMHRDADEQTDA-----PVVSLSLGDTCVFRFGNPETRTRPYTDTELRSGDLFVFGG 180
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SR +HGV ++ P TAP L RGRLN+T R
Sbjct: 181 PSRLAYHGVPRVHPGTAPPEL-----GLRGRLNITLR 212
>gi|126348301|emb|CAJ90022.1| putative DNA repair protein [Streptomyces ambofaciens ATCC 23877]
Length = 223
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W + +++ CR+ P G G + + +CLG +W
Sbjct: 10 RTEIAPGAVHLPDWLDPGRQRDLLRACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWY 69
Query: 420 PETSQYGTSRPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R DGA P +L +A+ D+ D AE P
Sbjct: 70 P----YAYARTVVDGDGAPVKPFPDRLGELGRRAVTDALG---------ADAVAEAPY-- 114
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
DI + NFY A ++G+H+D DE ++ PVVS S+GD+ F +G+ V
Sbjct: 115 -DIALINFYDADARMGMHRDADERSDA-----PVVSLSLGDTCVFRFGNPETRTRPYTDV 168
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR+ +HGV ++ TAP +L GRLNLT R
Sbjct: 169 ELRSGDLFVFGGPSRQAYHGVPRVHAGTAPPALGLT-----GRLNLTLR 212
>gi|398787779|ref|ZP_10550084.1| 2OG-Fe(II) oxygenase [Streptomyces auratus AGR0001]
gi|396992742|gb|EJJ03840.1| 2OG-Fe(II) oxygenase [Streptomyces auratus AGR0001]
Length = 234
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 359 LKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
L+ + + ++ W + ++ ++V CR GP G + ++ +C+G +W
Sbjct: 23 LRREVAPGAVHVPGWLPLAQQRELVTACRGWARGPAPIRHTKLPRGGVMSVQTVCIGWHW 82
Query: 419 DPETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCM 475
P Y +R D GA P +L RAL+ +D A
Sbjct: 83 QP----YAYTRTADDVNGARVAAFPDWMVEL------GRRALV----VAYRDATAGA-GY 127
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD + NFY KLG+HQDK+E + PVVS SIGD+ F +G+
Sbjct: 128 TPDTALINFYDGQAKLGMHQDKEERSPA-----PVVSLSIGDTCVFRFGNTETRTKPYTD 182
Query: 536 I-LESGDVLIFGGKSRRIFHGVEKIFPDTA-PKSLLEETSMRRGRLNLTFR 584
I L SGD+ +FGG SR +HGV K+ P T P S L GRLN+T R
Sbjct: 183 IELASGDLFVFGGPSRFAYHGVTKVRPGTGDPASGLSS-----GRLNITMR 228
>gi|357392743|ref|YP_004907584.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Kitasatospora setae KM-6054]
gi|311899220|dbj|BAJ31628.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Kitasatospora setae KM-6054]
Length = 237
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W ++ +V CR GP G + ++ +CLG +W P
Sbjct: 22 IAPGAVHLPGWLTPEQQRSLVTACRGWATGPVPIRHTRLPRGGVMSVQTVCLGWHWKP-- 79
Query: 423 SQYGTSRPTDGA----VPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
Y +R D V P P L +A+ D+ E+ + PD
Sbjct: 80 --YAYTRTADDVNGRPVTPF-PGWLADLGRRAVADAYQDEERAAG-----------YEPD 125
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ NFY A +LG+HQDKDE +++D PVVS SIGDS F G+ + L
Sbjct: 126 AALVNFYDAEARLGMHQDKDE--KTLD---PVVSLSIGDSCLFRLGNTEHRNRPWTDLTL 180
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+L+FGG SR +H V KI P T + T + GRLNLT R
Sbjct: 181 ASGDLLVFGGPSRLAYHAVPKIHPGTGDPA----TGLAAGRLNLTLR 223
>gi|323449197|gb|EGB05087.1| hypothetical protein AURANDRAFT_66742 [Aureococcus anophagefferens]
Length = 1793
Score = 98.2 bits (243), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 93/189 (49%), Gaps = 25/189 (13%)
Query: 399 PGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALI 458
P Y DGA KM CLG+ WD S Y + A
Sbjct: 1624 PVYADGARGKCKMACLGEKWDHVHSLYAGAGAAPIP-----------------AALAAAA 1666
Query: 459 EKISTGRKDIEAELPCM-SPDICIANFYSATG-KLGLHQDKDESQESIDKCLPVVSFSIG 516
+A LP +PD+C+ NFY G ++GLH+D E ++++ PVVS S+G
Sbjct: 1667 RDAHAACAAADASLPAFDAPDVCLVNFYDHGGDRMGLHRDDSEEASALERGSPVVSISLG 1726
Query: 517 DSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI-FPDTAPKSLLEETSMR 575
SA F RD A+ V L SGDVL FGG +R IFHGVE++ P TAP L +MR
Sbjct: 1727 ASATFATAATRDGPRAR-VTLRSGDVLCFGGAARGIFHGVERVDKPKTAPAGL----NMR 1781
Query: 576 RGRLNLTFR 584
GRLNLTFR
Sbjct: 1782 PGRLNLTFR 1790
>gi|302532894|ref|ZP_07285236.1| alkylated DNA repair protein AlkB [Streptomyces sp. C]
gi|302441789|gb|EFL13605.1| alkylated DNA repair protein AlkB [Streptomyces sp. C]
Length = 236
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W G + +++ CR+ P G G + + +CLG +W
Sbjct: 28 RTEIAPGAVHLPEWLGPRRQRELLAACREWARPPAGLRTVRTPGGGTMTARQVCLGLHWY 87
Query: 420 PETSQYGTSR-PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL-----P 473
P Y +R DG P+ P+ A + ++ GR+ + A P
Sbjct: 88 P----YAYARTAVDGDGAPVKPMP-------------AWLAEL--GRRAVTAAYGSPPPP 128
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA- 532
+ DI + NFY ++G+H+D +E + PVVS S+GDS F +G+
Sbjct: 129 SEAYDIALVNFYDGDSRMGMHRDAEERSGA-----PVVSLSLGDSCLFRFGNTASRGRPY 183
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ V L SGD+ +FGG SR +HGV K+ P TAP L GRLN+T R
Sbjct: 184 RDVELRSGDLFVFGGPSRLAYHGVPKVLPGTAPPGLGLT-----GRLNITLR 230
>gi|395770894|ref|ZP_10451409.1| putative DNA repair protein [Streptomyces acidiscabies 84-104]
Length = 231
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + +++ CR+ P G G + + +CLG +W
Sbjct: 10 RTQVAPGAVHVPDWLDAAAQRDLLEACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWY 69
Query: 420 PETSQYGTSRPT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL-----P 473
P Y +R DG G A++ A + ++ GR+ + A P
Sbjct: 70 P----YAFARTVVDGD-------------GSAVKPFPAWLGEL--GRRAVAAAYDGPPEP 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA- 532
+ DI + NFY A ++G+HQD +E ++ PVVS S+GD F +G+
Sbjct: 111 GPAYDIGLVNFYDADARMGMHQDAEERSDA-----PVVSLSLGDRCVFRFGNTGSRGKPY 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGD+ +FGG SRR FH V K+FP TAP L GRLN+T R
Sbjct: 166 TDVELRSGDLFVFGGASRRAFHAVPKVFPGTAPDGL-----GLVGRLNVTLR 212
>gi|441170617|ref|ZP_20969307.1| 2OG-Fe(II) oxygenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440615286|gb|ELQ78487.1| 2OG-Fe(II) oxygenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 224
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
+I W + ++V CR GP G + ++ +CLG +W P + T+
Sbjct: 24 HIPGWLSPERQRELVTACRGWARGPVPIRHTRLPRGGVMSVQTVCLGWHWQPYAYKR-TA 82
Query: 429 RPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSAT 488
+GA P +L A+ D+ E + G +PD + NFY
Sbjct: 83 DDVNGARVAEFPDWLVRLGRAALADA---YEDATAGEG--------YTPDTALINFYDGQ 131
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI-LESGDVLIFGG 547
++G+HQDKDE + PVVS SIGD+ F +G+ I L SGD+ +FGG
Sbjct: 132 ARMGMHQDKDERSSA-----PVVSLSIGDTCVFRFGNTESRNRPYTDIELASGDLFVFGG 186
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SR +HGV K+ P T + T + GRLN+T R
Sbjct: 187 PSRFAYHGVTKVLPGTGDPA----TGLTSGRLNITMR 219
>gi|291447008|ref|ZP_06586398.1| alkylated DNA repair protein [Streptomyces roseosporus NRRL 15998]
gi|291349955|gb|EFE76859.1| alkylated DNA repair protein [Streptomyces roseosporus NRRL 15998]
Length = 219
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V CR GP F G + ++ +CLG +W P Y +
Sbjct: 15 HVPEWLSVERRAELVTACRRWARGPVPFRHTVLPSGGVMSVRTVCLGWHWQP----YRYA 70
Query: 429 RPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R D GA P E+ +G+A ++ D EA +PD + NFY
Sbjct: 71 RTADDVNGARVAAFP-EWLGDLGRA---------AVAEAYGDEEAARE-FAPDTALINFY 119
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLI 544
++G+HQDK+E + PVVS SIG F +G+ V L SGD+ +
Sbjct: 120 DDAARMGMHQDKEERSGA-----PVVSLSIGARCVFRFGNTEGRGQPYTDVELASGDLFV 174
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
FGG SR +HGV K++ TA + +R GRLNLT R+
Sbjct: 175 FGGPSRFAYHGVPKVYAGTADPA----AGLRAGRLNLTLRE 211
>gi|451335705|ref|ZP_21906270.1| Alkylated DNA repair protein AlkB [Amycolatopsis azurea DSM 43854]
gi|449421597|gb|EMD27004.1| Alkylated DNA repair protein AlkB [Amycolatopsis azurea DSM 43854]
Length = 191
Score = 97.4 bits (241), Expect = 2e-17, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 33/213 (15%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTD 432
W + + ++V+ CR G+ + +G + ++ +CLG +W P Y S+ TD
Sbjct: 4 WLDLDAQRRLVEACRSWR----GYRRTRLPNGGVMSVRTVCLGWHWYP----YRYSKVTD 55
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLG 492
P++P F +G RA+++ + + PDI + NFY + K+G
Sbjct: 56 DG-SPVLP--FPSWLGDL--GRRAVLDAYGSSSYE---------PDIALVNFYDSAAKMG 101
Query: 493 LHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGGKSRR 551
+HQDKDE+ PVVS S+GD+ F +G+ D V L SGD+ +FGG+SR
Sbjct: 102 MHQDKDEASLE-----PVVSLSLGDACVFRFGNTSDRGRPYTDVDLRSGDLFVFGGESRL 156
Query: 552 IFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
FHGV ++ P TA L GRLN+T R
Sbjct: 157 AFHGVPRVSPGTADPEL-----GLAGRLNITLR 184
>gi|239989995|ref|ZP_04710659.1| putative DNA repair protein [Streptomyces roseosporus NRRL 11379]
Length = 204
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTD 432
W + ++V CR GP F G + ++ +CLG +W P Y +R D
Sbjct: 4 WLSVERRAELVTACRRWARGPVPFRHTVLPSGGVMSVRTVCLGWHWQP----YRYARTAD 59
Query: 433 ---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
GA P E+ +G+A ++ D EA +PD + NFY
Sbjct: 60 DVNGARVAAFP-EWLGDLGRA---------AVAEAYGDEEAARE-FAPDTALINFYDDAA 108
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGK 548
++G+HQDK+E + PVVS SIG F +G+ V L SGD+ +FGG
Sbjct: 109 RMGMHQDKEERSGA-----PVVSLSIGARCVFRFGNTEGRGQPYTDVELASGDLFVFGGP 163
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SR +HGV K++ TA + +R GRLNLT R+
Sbjct: 164 SRFAYHGVPKVYAGTADPA----AGLRAGRLNLTLRE 196
>gi|172040062|ref|YP_001799776.1| hypothetical protein cur_0382 [Corynebacterium urealyticum DSM
7109]
gi|171851366|emb|CAQ04342.1| hypothetical protein cu0382 [Corynebacterium urealyticum DSM 7109]
Length = 226
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 31/238 (13%)
Query: 356 RNDLKLSIGAKSNYIEAWYGITEEVKIV----KICRDLGLGPGGFYQPGYRDGANLYLKM 411
R+D +++ G ++ W + ++ +V +I R+L P +P + G + + M
Sbjct: 8 RDDARITPGVV--HLPGWLELGQQAAVVSQLREIARELAGTPLSMSRPQLKSG-RMQVFM 64
Query: 412 MCLGKNWDPE-TSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKD--I 468
+ LG+ W E T +Y T G P +P ++ +A+ S R D +
Sbjct: 65 LHLGRMWVTEPTYRYVTH--VAGHRVPQVPENLAEIARQALA---------SAARYDAPL 113
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
A PD+ + N+Y +G+HQD++E + PVVS SIGD A F G
Sbjct: 114 SAWADTFRPDMALVNYYPPGATMGMHQDRNE-----NSLAPVVSLSIGDEALFRIGSTET 168
Query: 529 VAN-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L SGDV++FGG R FHGV P T P++L + ++ GR+N+TFRQ
Sbjct: 169 RNQPWDEVTLISGDVIVFGGPKRLAFHGV----PQTRPETLPDGCGLKEGRINITFRQ 222
>gi|419966199|ref|ZP_14482131.1| alkylated DNA repair protein [Rhodococcus opacus M213]
gi|414568385|gb|EKT79146.1| alkylated DNA repair protein [Rhodococcus opacus M213]
Length = 221
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W E+ +V CR P G + ++ +CLG +W
Sbjct: 12 RTVVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWK 71
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P + G V P+ P +L +A+ ++ K + G +PD
Sbjct: 72 PYSYSRTAEDAGGGRVAPV-PGWLVELGRRAVCEAYG---KPADG----------YTPDA 117
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILE 538
+ NFY T K+G+HQDK+E ++ PVVS SIGD+ F +G+ V L
Sbjct: 118 ALINFYDDTAKMGMHQDKEERSDA-----PVVSLSIGDTCTFRFGNTATRTKPYTDVELL 172
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+ +FGG+SR +HGV K+FP T+ + + GRLN+T R
Sbjct: 173 SGDLFVFGGESRFAYHGVPKVFPGTSDP----DCGLTTGRLNITLRM 215
>gi|432341096|ref|ZP_19590480.1| alkylated DNA repair protein [Rhodococcus wratislaviensis IFP 2016]
gi|430773860|gb|ELB89504.1| alkylated DNA repair protein [Rhodococcus wratislaviensis IFP 2016]
Length = 221
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 24/227 (10%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W E+ +V CR P G + ++ +CLG +W
Sbjct: 12 RTVVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWK 71
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P + G V P+ P +L +A+ ++ K + G +PD
Sbjct: 72 PYSYSRTAEDAGGGRVAPV-PGWLVELGRRAVSEAYG---KPADG----------YTPDA 117
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILE 538
+ NFY T K+G+HQDK+E ++ PVVS SIGD+ F +G+ V L
Sbjct: 118 ALINFYDDTAKMGMHQDKEERSDA-----PVVSLSIGDTCTFRFGNTATRTKPYTDVELL 172
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+ +FGG+SR +HGV K+FP T + + GRLN+T R
Sbjct: 173 SGDLFVFGGESRFAYHGVPKVFPGTNDP----DCGLTTGRLNITLRM 215
>gi|384101021|ref|ZP_10002075.1| alkylated DNA repair protein [Rhodococcus imtechensis RKJ300]
gi|383841580|gb|EID80860.1| alkylated DNA repair protein [Rhodococcus imtechensis RKJ300]
Length = 208
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
+ + ++ W E+ +V CR P G + ++ +CLG +W P +
Sbjct: 2 VAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPYS 61
Query: 423 SQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIA 482
G V P+ P +L +A+ ++ + + G +PD +
Sbjct: 62 YSRTAEDAGGGRVAPV-PGWLVELGRRAVSEAYG---QPADG----------YTPDAALI 107
Query: 483 NFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGD 541
NFY T K+G+HQDK+E ++ PVVS SIGD+ F +G+ V L SGD
Sbjct: 108 NFYDDTAKMGMHQDKEERSDA-----PVVSLSIGDTCTFRFGNTATRTKPYTDVELLSGD 162
Query: 542 VLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ +FGG+SR +HGV K+FP T+ + + GRLN+T R
Sbjct: 163 LFVFGGESRFAYHGVPKVFPGTSDP----DCGLTTGRLNITLRM 202
>gi|443629631|ref|ZP_21113952.1| putative Alkylated DNA repair protein AlkB [Streptomyces
viridochromogenes Tue57]
gi|443336856|gb|ELS51177.1| putative Alkylated DNA repair protein AlkB [Streptomyces
viridochromogenes Tue57]
Length = 217
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 29/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + ++++ CR+ P G G + + +CLG +W
Sbjct: 10 RTEVAPGAVHVPGWLDAERQRELLRACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWY 69
Query: 420 PETSQYGTSRPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R DGA P +L +A++D AL E + +EA
Sbjct: 70 P----YAYARTVVDGDGAPVKPFPGWLGELGRRAVRD--ALGEPVEAA---VEAY----- 115
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
DI + NFY A ++G+H+D DE + PVVS S+GD+ F +G+ V
Sbjct: 116 -DIALINFYDADARMGMHRDSDEKSPA-----PVVSLSLGDTCVFRFGNTETRTRPYTDV 169
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR HGV ++ P T+P L GRLN+T R
Sbjct: 170 ELRSGDLFVFGGPSRLAHHGVPRVQPGTSPPEL-----GLTGRLNITLR 213
>gi|397652882|ref|YP_006493565.1| hypothetical protein CULC0102_0129 [Corynebacterium ulcerans 0102]
gi|393401838|dbj|BAM26330.1| hypothetical protein CULC0102_0129 [Corynebacterium ulcerans 0102]
Length = 207
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 381 KIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIP 440
K + R L P +Q ++ G + +M LGK+W+ + QY + G P IP
Sbjct: 18 KARAVARRLAHTPLAMHQQQWKTG-TMSAHLMSLGKHWEYSSHQYVSE--WQGQKVPAIP 74
Query: 441 VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDES 500
F +A++ + L ++ D D + N+Y +GLHQD E
Sbjct: 75 DRFLVQAYEAMRQAACLDSSLAPWTSDYRI-------DAALVNYYPPGSGMGLHQDAFEE 127
Query: 501 QESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKI 559
+ PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I
Sbjct: 128 SSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRI 182
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQ 585
T P + + +GR+N+TFRQ
Sbjct: 183 DAATVP----DNCGLEKGRINMTFRQ 204
>gi|337289746|ref|YP_004628767.1| hypothetical protein CULC22_00130 [Corynebacterium ulcerans
BR-AD22]
gi|334698052|gb|AEG82848.1| hypothetical protein CULC22_00130 [Corynebacterium ulcerans
BR-AD22]
Length = 228
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 381 KIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIP 440
K + R L P +Q ++ G + +M LGK+W+ + QY + G P IP
Sbjct: 39 KARAVARRLAHTPLAMHQQQWKTG-TMSAHLMSLGKHWEYSSHQYVSE--WQGQKVPAIP 95
Query: 441 VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDES 500
F +A++ + L ++ D D + N+Y +GLHQD E
Sbjct: 96 DRFLVQAYEAMRQAACLDSSLAPWTSDYRI-------DAALVNYYPPGSGMGLHQDAFEE 148
Query: 501 QESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKI 559
+ PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I
Sbjct: 149 SSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRI 203
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQ 585
T P + + +GR+N+TFRQ
Sbjct: 204 DAATVP----DNCGLEKGRINMTFRQ 225
>gi|296141226|ref|YP_003648469.1| 2OG-Fe(II) oxygenase [Tsukamurella paurometabola DSM 20162]
gi|296029360|gb|ADG80130.1| 2OG-Fe(II) oxygenase [Tsukamurella paurometabola DSM 20162]
Length = 221
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDP 420
++I + I W + + I+ R+ GP R G + ++ +CLG +W P
Sbjct: 5 VTISPGAQLIPGWLDLDSQAWIIDRFREWARGPVPIRSATVR-GRPMSVQTVCLGWHWQP 63
Query: 421 ETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDIC 480
+ D V P +L + + D+ G EAE +PD
Sbjct: 64 YRYSRRATDVNDARVL-AFPPWLARLGRRVLADA---------GYPAAEAE--GYAPDTA 111
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK-KVILES 539
+ N+Y ++G+HQD+DE + PVVS SIGD+ F +G+ + V L S
Sbjct: 112 LVNYYDDRARMGMHQDRDEVSRA-----PVVSLSIGDACTFRFGNTENRNRPYIDVPLHS 166
Query: 540 GDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GD +FGG +R FHGV + P TAP E + GR+NLT R+
Sbjct: 167 GDAFVFGGPARLAFHGVTAVHPGTAP----EGCGLNHGRVNLTLRE 208
>gi|25026699|ref|NP_736753.1| hypothetical protein CE0143 [Corynebacterium efficiens YS-314]
gi|259508167|ref|ZP_05751067.1| DNA repair protein [Corynebacterium efficiens YS-314]
gi|23491978|dbj|BAC16953.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164256|gb|EEW48810.1| DNA repair protein [Corynebacterium efficiens YS-314]
Length = 237
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 373 WYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
W + E+ +V+ I R + P +P R G + + ++ LG++W +Y TS
Sbjct: 36 WLPLGEQAAVVEEARGIARSVAGTPLAMTRPQLRSG-QMSVHILSLGQHWATNPYRYVTS 94
Query: 429 RPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSAT 488
G P IP FH L +A+ D+ AL ++ AE + N+Y+
Sbjct: 95 --VGGVAVPPIPASFHDLAARALADAAALSPPLAAWSGKYRAE-------AALVNYYAPG 145
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK-KVILESGDVLIFGG 547
+G+HQD +E E+ PV+S SIGD+ F G+ + V L SGD++IFGG
Sbjct: 146 SAMGMHQDANELSEA-----PVISLSIGDTGIFRLGNTDNRNRPWVDVPLLSGDLIIFGG 200
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ RR FHGV +I DTAP E + RGR+N+T RQ
Sbjct: 201 EHRRAFHGVPRIEADTAP----EGCGLDRGRINITIRQ 234
>gi|383648514|ref|ZP_09958920.1| alkylated DNA repair protein [Streptomyces chartreusis NRRL 12338]
Length = 213
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 373 WYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPT- 431
W + +++ CR P G G + + +CLG +W P YG +R
Sbjct: 23 WLDAEGQRELLDACRAWARPPAGLRTVRTPGGGTMTARQVCLGLHWYP----YGYARTVV 78
Query: 432 DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL--PCMSPDICIANFYSATG 489
DG P+ P F + +G GR+ + L P + DI + NFY A
Sbjct: 79 DGDGAPVKP--FPEWLG-------------DLGRRAVRDTLGGPAPAYDIALINFYDADA 123
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGK 548
++G+H+D DE ++ PVVS S+GD+ F +G+ V L SGD+ +FGG
Sbjct: 124 RMGMHRDSDEKSDA-----PVVSLSLGDTCVFRFGNTETRTRPWTDVELRSGDLFVFGGP 178
Query: 549 SRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+R +HGV ++ P TAP +L GRLN+T R
Sbjct: 179 ARLAYHGVPRVHPGTAPPALGLA-----GRLNITLR 209
>gi|217979907|ref|YP_002364054.1| 2OG-Fe(II) oxygenase [Methylocella silvestris BL2]
gi|217505283|gb|ACK52692.1| 2OG-Fe(II) oxygenase [Methylocella silvestris BL2]
Length = 216
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+ P C+ NFY A ++GLHQD DE D PVVS S+GD A F YG +
Sbjct: 110 LPPQACLVNFYGAEARMGLHQDADEG----DFSAPVVSISLGDEALFRYGGQNRSDPTRS 165
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L SGDV++ GG SRR FHGV++IFP T+ E GR+NLT R+
Sbjct: 166 VRLRSGDVIVLGGPSRRAFHGVDRIFPGTS------ELLQGGGRINLTLRR 210
>gi|333022632|ref|ZP_08450696.1| putative DNA repair protein [Streptomyces sp. Tu6071]
gi|332742484|gb|EGJ72925.1| putative DNA repair protein [Streptomyces sp. Tu6071]
Length = 222
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ ++ + ++ W +V+ CRD GP + G + + +CLG++W
Sbjct: 12 RTTLAPGAVHVPDWLPPESRRALVEACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWL 71
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y SR D GA +P L +AI + E +
Sbjct: 72 P----YRYSRTADDVNGAPVLALPAWLADLGRRAIAAAYDDEEAAAR-----------YE 116
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD+ + N Y +G+HQDK+E + PVVS SIGD+ F G+ + I
Sbjct: 117 PDVALVNHYGPGATMGMHQDKEERASA-----PVVSLSIGDTCVFRLGNTETRGRPWQDI 171
Query: 537 -LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
LESGD+L+FGG SR ++HGV K+ P T + RGRLNLT R
Sbjct: 172 ELESGDLLVFGGPSRFVYHGVPKVRPGTGDPG----DGLARGRLNLTLR 216
>gi|145294267|ref|YP_001137088.1| hypothetical protein cgR_0223 [Corynebacterium glutamicum R]
gi|417971478|ref|ZP_12612402.1| hypothetical protein CgS9114_10667 [Corynebacterium glutamicum
S9114]
gi|140844187|dbj|BAF53186.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044222|gb|EGV39902.1| hypothetical protein CgS9114_10667 [Corynebacterium glutamicum
S9114]
Length = 230
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 24/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLG---LG-PGGFYQPGYRDGANLYLKMMCLGKNW 418
+ A ++ + G+ E+ +V RDL +G P +P + G + + M+ LGK W
Sbjct: 19 VAAGVVHLPNFLGLAEQKALVAQARDLAREVVGTPLAMVRPKLKSG-QMSVHMLHLGKYW 77
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
++ Y DG P +P F L +A+ + +L + + + AE
Sbjct: 78 --ASNPYRYVDVVDGFPVPPLPDSFVDLAHRALLSAGSLSNSLQSWSEAYRAE------- 128
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF-LYGDLRDVANAKKVIL 537
+ N+YS +G+HQD +E E+ PV+S SIGD+ F L G L + L
Sbjct: 129 AALVNYYSPDASMGMHQDANEESEA-----PVISLSIGDTGIFRLGGTLNRNKPWTDIPL 183
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG +RR FHG+ I +TAP ++ GR+N+T RQ
Sbjct: 184 MSGDLIVFGGANRRAFHGIPFIEANTAPAG----CGLKEGRINITIRQ 227
>gi|424861529|ref|ZP_18285475.1| alkylated DNA repair protein AlkB [Rhodococcus opacus PD630]
gi|356660001|gb|EHI40365.1| alkylated DNA repair protein AlkB [Rhodococcus opacus PD630]
Length = 221
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W E+ +V CR P G + ++ +CLG +W P +
Sbjct: 21 HVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPYSYSRTAE 80
Query: 429 RPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSAT 488
G V P+ P +L +A+ D+ G+ D PD + NFY T
Sbjct: 81 DAGGGRVAPV-PDWLVELGRRAVSDAY--------GQPD-----DGYIPDAALINFYDDT 126
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGG 547
K+G+HQDK+E ++ VVS SIGD+ F +G+ V L SGD+ +FGG
Sbjct: 127 AKMGMHQDKEERSDAA-----VVSLSIGDTCTFRFGNTTTRTKPYTDVELLSGDLFVFGG 181
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+SR +HGV K+FP T+ + + +GRLN+T R
Sbjct: 182 ESRFAYHGVPKVFPGTSDP----DCGLTKGRLNITLR 214
>gi|409357380|ref|ZP_11235761.1| alkylated DNA repair protein [Dietzia alimentaria 72]
Length = 239
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 22/230 (9%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGL--GPGGFYQPGYRDGANLYLKMMCLGKNWDP 420
+G + +I W ++ +++ C P PG G + ++ + LG++W P
Sbjct: 15 LGPGAVHIPDWMSRGQQEYLLRACVGWAATRAPRSIELPG---GGRMSVRTLSLGRHWLP 71
Query: 421 ETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKD-IEAEL---PCMS 476
R D P IP + A+ + A+ ++ R EA +
Sbjct: 72 Y-------RYDDDEDTPPIPAWLLRAARSALTSAAAIDRSVALVRPGHPEAAYSPDTAFT 124
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + N Y +GLHQD+DE ++ PVVS S+GD+ F +G V
Sbjct: 125 PDAALVNLYGRGSTMGLHQDRDEDSDA-----PVVSLSLGDACTFRFGTPEHRGRPYTDV 179
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGD+++FGG SR FHGV K+F TAP + GR+N+T RQ
Sbjct: 180 RLESGDLVVFGGPSRLAFHGVPKVFDGTAPAWCTDVLGAAPGRVNITLRQ 229
>gi|408827177|ref|ZP_11212067.1| DNA repair protein [Streptomyces somaliensis DSM 40738]
Length = 239
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 31/230 (13%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
++ + + ++ W +V+ CR+ GP + G + ++ +CLG +W
Sbjct: 30 RVEVAPGAVHMPGWLSPERRRALVEACREWACGPVPIRRTVLPGGGVMSVRTVCLGWHWL 89
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y SR D GA P L +A+ + E
Sbjct: 90 P----YRYSRTADDVNGAPVTAFPDRLGALGREAVAAA--------------YGEDGGYR 131
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY ++G+HQD++E + PVVS SIGD+ F +G V
Sbjct: 132 PDAALVNFYDGDARMGMHQDREERSTA-----PVVSLSIGDACLFRFGTAEGRGRPYTDV 186
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGD+ +FGG SR +HGV K++P T + +R GRLN+T R+
Sbjct: 187 RLESGDLFVFGGPSRFAYHGVPKVYPGTGDPA----AGLRAGRLNITLRE 232
>gi|19551394|ref|NP_599396.1| alkylated DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|62389038|ref|YP_224440.1| DNA repair protein [Corynebacterium glutamicum ATCC 13032]
gi|21322908|dbj|BAB97537.1| Alkylated DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|41324371|emb|CAF18711.1| PUTATIVE DNA REPAIR PROTEIN [Corynebacterium glutamicum ATCC 13032]
gi|385142323|emb|CCH23362.1| alkylated DNA repair protein [Corynebacterium glutamicum K051]
Length = 230
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 24/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLG---LG-PGGFYQPGYRDGANLYLKMMCLGKNW 418
+ A ++ + G+ E+ +V RDL +G P +P + G + + M+ LGK W
Sbjct: 19 VAAGVVHLPNFLGLAEQKALVAQARDLAREVVGTPLAMVRPKLKSG-QMSVHMLHLGKYW 77
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
++ Y DG P +P F L +A+ + +L + + + AE
Sbjct: 78 --ASNPYRYVDVVDGFPVPPLPDSFVDLAHRALLSAGSLSNSLQSWSEAYRAE------- 128
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF-LYGDLRDVANAKKVIL 537
+ N+YS +G+HQD +E E+ PV+S SIGD+ F L G L + L
Sbjct: 129 AALVNYYSPDASMGMHQDANEESEA-----PVISLSIGDTGIFRLGGTLNRNKPWTDIPL 183
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG +R+ FHG+ I +TAP ++ GR+N+T RQ
Sbjct: 184 MSGDLIVFGGANRQAFHGIPSIEANTAPAG----CGLKEGRINITIRQ 227
>gi|182436704|ref|YP_001824423.1| DNA repair protein [Streptomyces griseus subsp. griseus NBRC 13350]
gi|326777304|ref|ZP_08236569.1| putative DNA repair protein [Streptomyces griseus XylebKG-1]
gi|178465220|dbj|BAG19740.1| putative DNA repair protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326657637|gb|EGE42483.1| putative DNA repair protein [Streptomyces griseus XylebKG-1]
Length = 230
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V CR GP G + ++ +CLG +W P Y +
Sbjct: 25 HVPEWLSVERRAELVAACRQWASGPVPLRHTVLPGGGVMSVRTVCLGWHWQP----YRYA 80
Query: 429 RPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R D GA P E+ +G+A A+ E G AE +PD + NFY
Sbjct: 81 RTADDVNGARVAAFP-EWLGDLGRA-----AVAEAYGDGEA---AE--AFAPDTALINFY 129
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLI 544
+ ++G+HQD++E + PVVS SIG F +G+ V L SGD+ +
Sbjct: 130 DDSARMGMHQDREERSSA-----PVVSLSIGARCVFRFGNTEGRGRPYTDVELASGDLFV 184
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
FGG SR FHGV K++ A + +R GRLNLT R+
Sbjct: 185 FGGPSRFAFHGVPKVYAGPADPA----AGLRAGRLNLTLRE 221
>gi|296120178|ref|ZP_06838731.1| putative DNA repair protein [Corynebacterium ammoniagenes DSM
20306]
gi|295966870|gb|EFG80142.1| putative DNA repair protein [Corynebacterium ammoniagenes DSM
20306]
Length = 229
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 25/235 (10%)
Query: 356 RNDLKLSIGAKSNYIEAWYGITEEVKIVKICRD----LGLGPGGFYQPGYRDGANLYLKM 411
RN K+ G ++ W + + +V+ RD + P +P + G +
Sbjct: 11 RNPTKIKPGVA--HVPGWLDVPTQRGLVEQLRDEARIMAGTPMAMRKPILKSGGQMSTFT 68
Query: 412 MCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAE 471
+ LG +WD + +Y R +V P+ P +L + ++ + + E +++
Sbjct: 69 LHLGHHWDHQGYRY-VDRIGGTSVRPV-PENLLELAHRGLRAAAEVAE-------ELQPW 119
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
+ PD+ + NFY +G+HQD E+ + P+VS SIGD A F G
Sbjct: 120 IAGFGPDMALVNFYPPGATMGMHQDAYETTLA-----PIVSLSIGDEAVFRLGSTEHRNK 174
Query: 532 -AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L SGD+++FGG +R+ FHGV P+T P +L E ++ GR+N+TFRQ
Sbjct: 175 PWDDIALLSGDLIVFGGPNRQAFHGV----PETRPGTLDEACGLKEGRINITFRQ 225
>gi|317507590|ref|ZP_07965304.1| alkylated DNA repair protein AlkB [Segniliparus rugosus ATCC
BAA-974]
gi|316254110|gb|EFV13466.1| alkylated DNA repair protein AlkB [Segniliparus rugosus ATCC
BAA-974]
Length = 262
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 25/223 (11%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W ++E+ ++ + GP +G + ++ +CLG +W P
Sbjct: 58 IAPGAVHLPDWLPLSEQARLAAAFAEWSCGPVPPRAASLPNGGRMSVETVCLGWHWLP-- 115
Query: 423 SQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIA 482
Y +R D + + F +G +R +E+ PD +A
Sbjct: 116 --YRYTRTADDVNGRRV-LPFPDWLGDL---ARGAVEEAC-------GAATAYRPDAALA 162
Query: 483 NFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGD 541
N+Y ++G+HQDK+E PVVSFS+GDS F +G++ V L SGD
Sbjct: 163 NYYRPDARMGMHQDKEERAAD-----PVVSFSVGDSCVFRFGNVEGRGQPYTDVRLGSGD 217
Query: 542 VLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+FGG +R +HGV K+FP+TAP + RGR+N+T R
Sbjct: 218 AFVFGGPARFAYHGVPKLFPNTAPAG----CGLDRGRINITVR 256
>gi|411007920|ref|ZP_11384249.1| DNA repair protein [Streptomyces globisporus C-1027]
Length = 198
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 376 ITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTD--- 432
+ + ++V CR GP F G + ++ +CLG +W P Y +R D
Sbjct: 1 MEQRAELVVACRQWARGPVPFRHTLLPGGGVMSVRTVCLGWHWQP----YRYARTADDVN 56
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLG 492
GA P L A+ ++ G +D +PD + NFY ++G
Sbjct: 57 GARVAAFPDWLGDLGRAAVAEA--------YGDEDAA---QAFAPDTALINFYDDAARMG 105
Query: 493 LHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRR 551
+HQDK+E + PVVS SIG F +G+ V L SGD+ +FGG SR
Sbjct: 106 MHQDKEERSSA-----PVVSLSIGARCVFRFGNTEGRGQPYTDVELASGDLFVFGGPSRF 160
Query: 552 IFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
FHGV K++ TA + +R GRLNLT R+
Sbjct: 161 AFHGVPKVYTGTADPA----AGLRAGRLNLTLRE 190
>gi|386838595|ref|YP_006243653.1| DNA repair protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374098896|gb|AEY87780.1| putative DNA repair protein [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791886|gb|AGF61935.1| putative DNA repair protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 216
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 26/227 (11%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + ++ CRD P G G + + +CLG +W
Sbjct: 10 RAEVAPGAVHVVDWLDAERQRALLAACRDWARPPAGLRTVRTPGGGTMTARQVCLGWHWY 69
Query: 420 PETSQYGTSRPT-DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
P Y +R DG P+ P F +G RA+ + + +P + D
Sbjct: 70 P----YAYARTVVDGDGSPVKP--FPDWLGA--LGRRAVADALG------PDAVPAVPYD 115
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVIL 537
I + NFY ++G+H+D DE ++ PVVS S+GD+ F +G+ A V L
Sbjct: 116 IALINFYDGDARMGMHRDGDEKTDA-----PVVSLSLGDTCVFRFGNTGTRAKPYTDVEL 170
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+ +FGG SR +HGV ++ P TAP L GRLN+T R
Sbjct: 171 RSGDLFVFGGPSRFAYHGVPRVRPGTAPAWLGLA-----GRLNITLR 212
>gi|386739447|ref|YP_006212627.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 31]
gi|384476141|gb|AFH89937.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 31]
Length = 228
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 381 KIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIP 440
K + R L P +Q ++ G + +M LGK+W+ + QY + G P IP
Sbjct: 39 KARAVARRLAHTPLAMHQQQWKSG-TMSAHLMSLGKHWEYNSHQYVSE--WQGQKVPDIP 95
Query: 441 VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDES 500
F +A + + L ++ D D + N+Y +G+HQD E
Sbjct: 96 NNFLTQAYEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQDVFEE 148
Query: 501 QESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKI 559
+ PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I
Sbjct: 149 SSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRI 203
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQ 585
T P + + RGR+N+TFRQ
Sbjct: 204 DDATVP----DNCGLERGRINITFRQ 225
>gi|159046112|ref|YP_001534906.1| alpha-ketoglutarate-dependent dioxygenase alkB [Dinoroseobacter
shibae DFL 12]
gi|157913872|gb|ABV95305.1| alpha-ketoglutarate-dependent dioxygenase alkB [Dinoroseobacter
shibae DFL 12]
Length = 211
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 34/192 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
FY+P G + ++M G+ W D + +Y + P GA P I P + + +
Sbjct: 48 FYRPVTPSGKAMSVRMTAAGRFGWVSDRQGYRYAPTHPGGGAWPDI-PNSVLTIWDRLVP 106
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
++R P+ C+ NFY A K+GLHQD+DE+ D PV+S
Sbjct: 107 EAR--------------------RPECCLVNFYDAHAKMGLHQDRDEA----DFSQPVLS 142
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD+A F G + + LESGDV + GG++R I HG+++I P ++ +LL E
Sbjct: 143 VSLGDAARFRVGSTSRGGTTESLWLESGDVAVMGGEARLIHHGIDRIKPGSS--TLLPEG 200
Query: 573 SMRRGRLNLTFR 584
GR+NLT R
Sbjct: 201 ----GRINLTLR 208
>gi|318059514|ref|ZP_07978237.1| alkylated DNA repair protein [Streptomyces sp. SA3_actG]
gi|318079147|ref|ZP_07986479.1| alkylated DNA repair protein [Streptomyces sp. SA3_actF]
Length = 219
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ ++ + ++ W +V+ CRD GP + G + + +CLG++W
Sbjct: 9 RTALAPGAVHVPDWLPPESRRALVEACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWL 68
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y SR D GA P++P+ A RA+ E
Sbjct: 69 P----YRYSRTADDVNGA--PVLPLPAWL----ADLGRRAIAAAYDDEEAAARYE----- 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKV 535
PD+ + N Y +G+HQDK+E + PVVS SIGD+ F G+ + V
Sbjct: 114 PDVALVNHYGPGATMGMHQDKEERASA-----PVVSLSIGDTCVFRLGNTDTRGRPWQDV 168
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
LESGD+L+FGG SR +HGV K+ P T + RGRLNLT R
Sbjct: 169 ELESGDLLVFGGPSRFAYHGVPKVRPGTGDPG----DGLARGRLNLTLR 213
>gi|302523470|ref|ZP_07275812.1| alkylated DNA repair protein AlkB [Streptomyces sp. SPB78]
gi|302432365|gb|EFL04181.1| alkylated DNA repair protein AlkB [Streptomyces sp. SPB78]
Length = 219
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ ++ + ++ W +V CRD GP + G + + +CLG++W
Sbjct: 9 RTTLAPGAVHVPDWLPPESRRALVGACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWL 68
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y SR D GA P++P+ A RA+ E
Sbjct: 69 P----YRYSRTADDVNGA--PVLPLPAWL----ADLGRRAIAAAYDDEEAAARYE----- 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKV 535
PD+ + N Y +G+HQDK+E + PVVS SIGD+ F G+ + V
Sbjct: 114 PDVALVNHYGPGATMGMHQDKEERASA-----PVVSLSIGDTCVFRLGNTETRGRPWQDV 168
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
LESGD+L+FGG SR +HGV K+ P T + RGRLNLT R
Sbjct: 169 ELESGDLLVFGGPSRFAYHGVPKVRPGTGDPG----DGLARGRLNLTLR 213
>gi|407975416|ref|ZP_11156321.1| 2OG-Fe(II) oxygenase [Nitratireductor indicus C115]
gi|407429044|gb|EKF41723.1| 2OG-Fe(II) oxygenase [Nitratireductor indicus C115]
Length = 205
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+ P+ C+ NFYS K+GLHQD+DE + S PVVS S+GD+ F G A
Sbjct: 99 ALQPEACLVNFYSENAKMGLHQDRDEQEFSA----PVVSISLGDTCLFRVGGTTRSARTA 154
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L+SGDV++ GG R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 155 SVKLQSGDVVVLGGAGRLAFHGVDRIYPGTS--TLLKNP----GRINLTLRR 200
>gi|440795503|gb|ELR16623.1| oxidoreductase, 2OGFe(II) oxygenase family protein [Acanthamoeba
castellanii str. Neff]
Length = 301
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 382 IVKICRDLG-------LGPGGFYQPGYRDGAN--LYLKMMCLGKNWDPETSQYGTSRPTD 432
+ +IC +G G GFYQ D N L M G+ D +S
Sbjct: 91 LAEICFSMGDEASGAQTGTTGFYQLKKSDKGNGMFKLNMGTRGRMIDSTSS--------- 141
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLG 492
P F +L +Q RA ++++ +P M P+ + NFY
Sbjct: 142 ------FPPRFAEL---CVQCLRAA--------QEVDDTMPDMEPNTNLINFYKPDANFK 184
Query: 493 LHQDKDESQ-ESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRR 551
H+D + Q + K PVVSFSIG S +F Y D + + V L+SGDV IFGG+SR
Sbjct: 185 WHKDSENPQLVKVGKGKPVVSFSIGLSCDFGYKDHYESEEHETVRLDSGDVFIFGGRSRM 244
Query: 552 IFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
I H V ++ P T P + + MR GRLN+TFR+
Sbjct: 245 IVHSVLRVIPHTMPGYMRKH--MREGRLNITFRE 276
>gi|389693892|ref|ZP_10181986.1| alkylated DNA repair protein [Microvirga sp. WSM3557]
gi|388587278|gb|EIM27571.1| alkylated DNA repair protein [Microvirga sp. WSM3557]
Length = 206
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ NFY T ++GLHQDKDE + + PVVS S+GD+A F YG L K +
Sbjct: 103 PDACLINFYEPTARMGLHQDKDEEEFAA----PVVSLSLGDTALFRYGGLERKDPTKSIR 158
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD ++FGG +R I+HG++++ ++ LL + GRLNLT R+
Sbjct: 159 LRSGDAIVFGGPARLIYHGIDRLIEGSS--DLLPQG----GRLNLTLRK 201
>gi|389849453|ref|YP_006351688.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 258]
gi|388246759|gb|AFK15750.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 258]
Length = 245
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 385 ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFH 444
+ R L P +Q ++ G + +M LGK+W+ + QY + G P IP F
Sbjct: 60 VARRLAHTPLAMHQQQWKSG-TMSAHLMSLGKHWEYNSHQYVSE--WQGQKVPDIPNNFL 116
Query: 445 QLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESI 504
+A + + L ++ D D + N+Y +G+HQD E +
Sbjct: 117 TQAYEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQDVFEESSA- 168
Query: 505 DKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDT 563
PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I T
Sbjct: 169 ----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRIDDAT 224
Query: 564 APKSLLEETSMRRGRLNLTFRQ 585
P + + RGR+N+TFRQ
Sbjct: 225 VP----DNCGLERGRINITFRQ 242
>gi|433457696|ref|ZP_20415676.1| DNA-N1-methyladenine dioxygenase [Arthrobacter crystallopoietes
BAB-32]
gi|432194468|gb|ELK51089.1| DNA-N1-methyladenine dioxygenase [Arthrobacter crystallopoietes
BAB-32]
Length = 222
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 35/244 (14%)
Query: 347 SLLVTNRQKRNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGAN 406
+L N R +L+ GA ++ W + ++ + R+ GP R G
Sbjct: 3 ALFGDNLLHRPRRELAPGAV--WVPGWLTLEQQRWLADRFREWAAGPVPIRSAKVR-GHE 59
Query: 407 LYLKMMCLGKNWDP-----ETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKI 461
+ +K +CLG +W P E +R D P +L KA+ ++
Sbjct: 60 MSVKTVCLGWHWRPYEYTREAVDVNGNRVLD------FPDWMVRLGRKALAEA------- 106
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
TG D +A +PD + N+Y ++G+HQDKDE + PVVS SIGD+ F
Sbjct: 107 -TG--DPQAG-EAYTPDTALVNYYDDQARMGMHQDKDERSLA-----PVVSLSIGDTCRF 157
Query: 522 LYGDLRDVANAKKVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
+G+ + + I L SGD+ +FGG SR +HGV K+ P TAP E + RGR+N
Sbjct: 158 RFGNTENRNKPYQDIDLASGDLFVFGGPSRLAYHGVMKLLPGTAP----EGCGLDRGRIN 213
Query: 581 LTFR 584
+T R
Sbjct: 214 ITMR 217
>gi|358447503|ref|ZP_09158025.1| putative alkylated DNA repair protein [Corynebacterium casei UCMA
3821]
gi|356606603|emb|CCE56392.1| putative alkylated DNA repair protein [Corynebacterium casei UCMA
3821]
Length = 226
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 356 RNDLKLSIGAKSNYIEAWYGITEEVKIVKICRD----LGLGPGGFYQPGYRDGANLYLKM 411
RN K+ G ++ W + +V+ RD + P +P + G + + M
Sbjct: 8 RNPAKIKPGVA--HVPGWLDTPTQQGLVQQLRDEARLMAGTPMAMQKPVLKSGGQMSVFM 65
Query: 412 MCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAE 471
+ LG WD +T +Y P +P + ++ + + E++ +
Sbjct: 66 LNLGHFWDHQTYRYVDRMGATNVRP--VPQNLLDIAHGGLRAAADVAEELQPWTTNYH-- 121
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
PD+ + NFY +G+HQD E+ + P+VS SIGD A F G
Sbjct: 122 -----PDMALINFYPPGATMGMHQDAYETTFA-----PIVSLSIGDEAVFRIGSTEHRNK 171
Query: 532 -AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L SGD+++FGG +R+ FHGV P+T P +L E ++ GR+N+TFRQ
Sbjct: 172 PWDDIALLSGDLVVFGGPNRQAFHGV----PETRPGTLDESCGLKEGRINITFRQ 222
>gi|163757493|ref|ZP_02164582.1| alkylated DNA repair protein [Hoeflea phototrophica DFL-43]
gi|162284995|gb|EDQ35277.1| alkylated DNA repair protein [Hoeflea phototrophica DFL-43]
Length = 202
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 34/194 (17%)
Query: 396 FYQPGY-RDGANLYLKMM-CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAI 451
Y+P R G L ++M C W D +Y S P GA P +P L
Sbjct: 36 LYRPEMPRTGKPLSVRMTNCGTLGWVSDKAGYRYQDSHPVSGAPWPPVPNRLKALWADLT 95
Query: 452 QDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
+SR P C+ N+Y + ++GLHQD+DES D PV+
Sbjct: 96 GESRP--------------------PQACLINYYDVSARMGLHQDRDES----DFSAPVL 131
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S S+GD+ F G + LESGDV+I GG+SR FHGV++I+P T+ +LL++
Sbjct: 132 SVSLGDACLFRIGGTERGQPTRSFRLESGDVVILGGESRLAFHGVDRIYPMTS--TLLKD 189
Query: 572 TSMRRGRLNLTFRQ 585
GR+NLT R+
Sbjct: 190 G----GRINLTLRR 199
>gi|294675782|ref|YP_003576397.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacter
capsulatus SB 1003]
gi|294474602|gb|ADE83990.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacter
capsulatus SB 1003]
Length = 211
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 37/234 (15%)
Query: 354 QKRNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMC 413
QKR D + G + + W TE+ +V+ R + + + P G + ++M
Sbjct: 9 QKRPDPQEIRGFR--HYPGWLVSTEQAALVEDLRAV-VAAAPLFSPMTPYGRPMSVRMTS 65
Query: 414 LGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
G+ W D +Y + P+ GA PPI +S I + +G
Sbjct: 66 AGRFGWVSDRRGYRYSETHPSGGAWPPI-------------PESVLGIWRAVSGSDR--- 109
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
SP+ C+ NFY+ ++GLHQD+DE+ D PVVS S+GD F G+
Sbjct: 110 -----SPECCLVNFYAEKARMGLHQDRDEA----DFAQPVVSISLGDDGLFRIGNETRGG 160
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ + L SGDVL+ GG +R ++HG+++I P T+ +LL + GR+NLT R
Sbjct: 161 ATQSLWLRSGDVLVMGGAARLLYHGIDRIAPGTS--TLLPQG----GRINLTLR 208
>gi|379714376|ref|YP_005302713.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 316]
gi|387137706|ref|YP_005693685.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387139754|ref|YP_005695732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|349734184|gb|AEQ05662.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355391545|gb|AER68210.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377653082|gb|AFB71431.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 316]
Length = 247
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 385 ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFH 444
+ R L P +Q ++ G + +M LGK+W+ + QY + G P IP F
Sbjct: 62 VARRLAHTPLAMHQQQWKSG-TMSAHLMSLGKHWEYNSHQYVSE--WQGQKVPDIPNNFL 118
Query: 445 QLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESI 504
+A + + L ++ D D + N+Y +G+HQD E +
Sbjct: 119 TQAYEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQDVFEESSA- 170
Query: 505 DKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDT 563
PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I T
Sbjct: 171 ----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRIDDAT 226
Query: 564 APKSLLEETSMRRGRLNLTFRQ 585
P + + RGR+N+TFRQ
Sbjct: 227 VP----DNCGLERGRINITFRQ 244
>gi|367468751|ref|ZP_09468585.1| Alkylated DNA repair protein AlkB [Patulibacter sp. I11]
gi|365816188|gb|EHN11252.1| Alkylated DNA repair protein AlkB [Patulibacter sp. I11]
Length = 228
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 29/233 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
++ I + ++ W + E+ ++V CR+ GP + +G + ++ +CLG +W
Sbjct: 11 RVEIAPGAVHVPDWLTVDEQRRLVAACREWAAGPAPMRRTRLPNGGLMSVQTVCLGWHWI 70
Query: 420 PETSQYGTSR---PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y SR DG P+ P F +G RAL +
Sbjct: 71 P----YRYSRIAEDVDGQ--PVTP--FPDWLGDL--GRRALADAYDARAARDY------R 114
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY ++G+H+D+DE ++ PVVS SIG S F +G+ V
Sbjct: 115 PDAALVNFYDGQARMGMHRDEDERSDA-----PVVSLSIGASCIFRFGNRETRGRPYTDV 169
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET----SMRRGRLNLTFR 584
L SGD+ +FGG SR FHGV + D + L + +R GRLNLT R
Sbjct: 170 ELRSGDLFVFGGPSRFCFHGVPRTLADDDRQPALGQGDPPHGLRGGRLNLTLR 222
>gi|114704740|ref|ZP_01437648.1| alkylated DNA repair protein [Fulvimarina pelagi HTCC2506]
gi|114539525|gb|EAU42645.1| alkylated DNA repair protein [Fulvimarina pelagi HTCC2506]
Length = 204
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 34/194 (17%)
Query: 396 FYQPGY-RDGANLYLKMMCLGK-NWDPETS--QYGTSRPTDGAVPPIIPVEFHQLVGKAI 451
+QP R G L +KM G+ W + S +Y P G V P IP +L K +
Sbjct: 36 LFQPVMPRSGKPLSVKMTNCGELGWVADRSGYRYQARHPDSGEVWPPIPERLLKL-WKEV 94
Query: 452 QDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
A P+ C+ NFYS T K+GLHQD+DE D PVV
Sbjct: 95 SGHDA-------------------PPEACLVNFYSETAKMGLHQDRDEE----DFTAPVV 131
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S S+GD F G+ + L SGDV+I GG+ R FHGV++I+P T+ +LL+
Sbjct: 132 SVSLGDDCLFRVGERDRDGRTTSIKLRSGDVVILGGEGRLSFHGVDRIYPSTS--TLLKN 189
Query: 572 TSMRRGRLNLTFRQ 585
GR+NLT R+
Sbjct: 190 G----GRINLTLRR 199
>gi|384514675|ref|YP_005709767.1| hypothetical protein CULC809_00133 [Corynebacterium ulcerans 809]
gi|334695876|gb|AEG80673.1| hypothetical protein CULC809_00133 [Corynebacterium ulcerans 809]
Length = 207
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 381 KIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIP 440
K + R L P +Q ++ G + +M LGK+W+ + QY + G P IP
Sbjct: 18 KARAVARRLAHTPLPMHQQQWKTG-TMSAHLMSLGKHWEYSSHQYVSE--WQGQKVPAIP 74
Query: 441 VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDES 500
F +A++ + L ++ D + N+Y +GLHQD E
Sbjct: 75 DSFLVQAYEAMRQAACLDSSLAPWTSHYRI-------DAALVNYYPPGSGMGLHQDAFEE 127
Query: 501 QESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKI 559
+ PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I
Sbjct: 128 SSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRI 182
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQ 585
T P + + +GR+N+TFRQ
Sbjct: 183 DAATVP----DNCGLEKGRINMTFRQ 204
>gi|307942720|ref|ZP_07658065.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Roseibium sp.
TrichSKD4]
gi|307773516|gb|EFO32732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Roseibium sp.
TrichSKD4]
Length = 206
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 37/214 (17%)
Query: 377 TEEVKIVKICRDLGLGPGGFYQPGY-RDGANLYLKMM-CLGKNW--DPETSQYGTSRPTD 432
++ ++ I RD+ LG Y+P R G ++M C W D + +Y + P
Sbjct: 21 VQQENLLDIIRDV-LGSAPLYRPEMPRTGKPFSVRMSNCGALGWVSDKDGYRYQPTHPVT 79
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLG 492
G P IP E + + + AL P+ C+ NFY+ ++G
Sbjct: 80 GNPWPPIP-EILLSLWQELSPDAAL-------------------PEACLINFYNEDARMG 119
Query: 493 LHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRI 552
LHQD+DE E+ D PV+S S+GD+A F G + + + + L+SGDV++ GG++R
Sbjct: 120 LHQDRDE--ETFDA--PVISVSLGDTAVFRIGGVERKSPTRSMKLQSGDVVVLGGEARLA 175
Query: 553 FHGVEKIFPDTAPKSLLEETSMRR-GRLNLTFRQ 585
FHG++++ P+T+ T MR+ GR+NLT R+
Sbjct: 176 FHGIDRLVPNTS-------TLMRQGGRVNLTLRR 202
>gi|386384036|ref|ZP_10069455.1| alkylated DNA repair protein [Streptomyces tsukubaensis NRRL18488]
gi|385668516|gb|EIF91840.1| alkylated DNA repair protein [Streptomyces tsukubaensis NRRL18488]
Length = 223
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W + + ++V+ CR GP + G + ++ +CLG +W P
Sbjct: 2 IAPGAVHVPGWLSVERQRELVEACRGWARGPVPLRRTVLPGGGVMSVRTVCLGWHWQP-- 59
Query: 423 SQYGTSRPTD---GAVPPIIP---VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
Y SR D GA +P VE+ + A A S +
Sbjct: 60 --YRYSRTADDVNGARVADLPDWLVEWGRSALAAAHGIGAGGGGPSEAATGAGGAG--YT 115
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY ++G+HQDK+E + PVVS SIGD F G+ V
Sbjct: 116 PDTALINFYDGAARMGMHQDKEERSGA-----PVVSLSIGDRCVFRLGNSETRGRPYTDV 170
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTA-PKSLLEETSMRRGRLNLTFRQ 585
L SGD+ +FGG SR +HGV K++P TA P+ +R GRLN+T R+
Sbjct: 171 ELASGDLFVFGGPSRFAYHGVPKVYPGTADPRC-----GLRTGRLNITLRE 216
>gi|294628038|ref|ZP_06706598.1| DNA repair protein [Streptomyces sp. e14]
gi|292831371|gb|EFF89720.1| DNA repair protein [Streptomyces sp. e14]
Length = 214
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++++ CR P G G + + +CLG +W P Y +
Sbjct: 2 HVPDWLDAARQRELLEACRRWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP----YAYA 57
Query: 429 RPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
R DGA P +L +A+ D AL + + EA DI + NFY
Sbjct: 58 RTVADGDGAPVKPFPAWLGELGRRAVTD--ALGPEAAR-----EAAY-----DIALINFY 105
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLI 544
A ++GLH+D DE + PVVS S+GD+ F +G+ V L SGD+ +
Sbjct: 106 DADARMGLHRDADEKSAA-----PVVSLSLGDTCVFRFGNTETRTRPWTDVELRSGDLFV 160
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
FGG SR +HGV ++ TAP L T GRLN+T R
Sbjct: 161 FGGPSRFAYHGVPRVHAGTAPGDELGLT----GRLNVTLR 196
>gi|111019320|ref|YP_702292.1| alkylated DNA repair protein [Rhodococcus jostii RHA1]
gi|110818850|gb|ABG94134.1| alkylated DNA repair protein [Rhodococcus jostii RHA1]
Length = 218
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + +V CR P G + ++ +CLG +W
Sbjct: 9 RTEVAPGAVHVPDWLTPAAQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWK 68
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P + G V P+ P +L +A+ ++ + + G +PD
Sbjct: 69 PYSYSRTAEDAGGGRVAPV-PGWLVELGRRAVSEAYG---QPADG----------YTPDA 114
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILE 538
+ NFY T K+G+HQDK+E ++ VVS SIGD+ F +G+ V L
Sbjct: 115 ALINFYDDTAKMGMHQDKEERSDAA-----VVSLSIGDTCTFRFGNTTTRTKPYTDVELL 169
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+ +FGG+SR +HGV K+FP T+ + + GRLN+T R
Sbjct: 170 SGDLFVFGGESRFAYHGVPKVFPGTSDPAC----GLTTGRLNITLR 211
>gi|220920495|ref|YP_002495796.1| 2OG-Fe(II) oxygenase [Methylobacterium nodulans ORS 2060]
gi|219945101|gb|ACL55493.1| 2OG-Fe(II) oxygenase [Methylobacterium nodulans ORS 2060]
Length = 215
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y+ ++GLHQD+DE++ + PV+S S+G +A F YG LR + +
Sbjct: 101 PEACLVNLYAPGSRMGLHQDRDEAEFAA----PVLSLSLGATAIFRYGGLRRGDPTRSIR 156
Query: 537 LESGDVLIFGGKSRRIFHGVEKIF---PDTAPKSLLEETSMRRGRLNLTFRQ 585
L GD L+ GG SR IFHG+++I PD LL + GRLNLT R+
Sbjct: 157 LRGGDALVIGGASRLIFHGIDRIVAEPPDLLAAPLLPQAVPPGGRLNLTLRR 208
>gi|397731719|ref|ZP_10498466.1| 2OG-Fe(II) oxygenase superfamily protein [Rhodococcus sp. JVH1]
gi|396932527|gb|EJI99689.1| 2OG-Fe(II) oxygenase superfamily protein [Rhodococcus sp. JVH1]
Length = 221
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + +V CR P G + ++ +CLG +W
Sbjct: 12 RTEVAPGAVHVPDWLTPAAQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWK 71
Query: 420 PETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDI 479
P + G V P+ P +L +A+ ++ + + G +PD
Sbjct: 72 PYSYSRTAEDAGGGRVAPV-PGWLVELGRRAVSEAYG---QPADG----------YTPDA 117
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILE 538
+ NFY T K+G+HQDK+E ++ VVS SIGD+ F +G+ V L
Sbjct: 118 ALINFYDDTAKMGMHQDKEERSDAA-----VVSLSIGDTCTFRFGNTTTRTKPYTDVELL 172
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGD+ +FGG+SR +HGV K+FP T+ + + GRLN+T R
Sbjct: 173 SGDLFVFGGESRFAYHGVPKVFPGTSDPAC----GLTTGRLNITLR 214
>gi|295835146|ref|ZP_06822079.1| DNA repair protein [Streptomyces sp. SPB74]
gi|295825338|gb|EDY44784.2| DNA repair protein [Streptomyces sp. SPB74]
Length = 222
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ ++ + ++ W +V+ CRD GP + G + + +CLG++W
Sbjct: 12 RTTLAPGAVHVPDWLPPERRGALVEECRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWL 71
Query: 420 PETSQYGTSRPTD---GAVPPIIPVE-FHQLVGKAIQDSRALIEKISTGRKDIEAELPCM 475
P Y SR D GA P++P+ + +G+ RA+ E
Sbjct: 72 P----YRYSRTADDVNGA--PVLPLPGWLGELGR-----RAIAAAYDDEEAAARYE---- 116
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKK 534
PD+ + N Y +G+HQDK+E + PVVS SIGD+ F G+ +
Sbjct: 117 -PDVALVNHYGPGATMGMHQDKEERASA-----PVVSLSIGDTCVFRLGNTETRGRPWQD 170
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V LESGD+L+FGG SR +HGV K+ P T + RGRLN+T R
Sbjct: 171 VELESGDLLVFGGPSRFAYHGVPKVRPGTGDPG----DGLARGRLNITLRM 217
>gi|403512625|ref|YP_006644263.1| 2OG-Fe(II) oxygenase superfamily protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402798269|gb|AFR05679.1| 2OG-Fe(II) oxygenase superfamily protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 215
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 376 ITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAV 435
+ + +V+ CR+ GP G + G + + M+ LG +W P Y SR +
Sbjct: 26 LETRIDLVRRCREWARGPAGMRRHTMPSGGVMSVDMVALGWHWRP----YAYSR----TL 77
Query: 436 PPIIPVE-FHQLVGK-AIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGL 493
P PV F L+G A++ A + G D+ + NFY A ++G+
Sbjct: 78 PDGTPVRPFPDLLGALAVRSVEAAYGEPYEGDAH----------DVALVNFYDADARMGM 127
Query: 494 HQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGGKSRRI 552
HQD+DE + PVVS S+GD+ F +G V L GDV +FGG SR
Sbjct: 128 HQDRDERSPA-----PVVSISLGDTCVFRFGGTEHRGRPYTDVELRDGDVFVFGGPSRLA 182
Query: 553 FHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+HGV ++ P TA +L +GRLN+T R
Sbjct: 183 YHGVPRVRPGTADPAL-----GLKGRLNITIR 209
>gi|89067381|ref|ZP_01154894.1| alkylated DNA repair protein, putative [Oceanicola granulosus
HTCC2516]
gi|89046950|gb|EAR53004.1| alkylated DNA repair protein, putative [Oceanicola granulosus
HTCC2516]
Length = 196
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 10/109 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+P C+ NFY ++G+HQD+DE D PVVS S+GDSA F G+L + V
Sbjct: 94 APQCCLVNFYGEGARMGMHQDRDEG----DFGQPVVSVSLGDSALFRIGNLTRGGKTESV 149
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
LESGDV++ GG++R ++HG++++ P+++ +LL E GR+NLT R
Sbjct: 150 WLESGDVVVIGGEARLVYHGIDRVKPNSS--TLLPEG----GRINLTLR 192
>gi|383313280|ref|YP_005374135.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis P54B96]
gi|384505785|ref|YP_005682454.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis C231]
gi|384507878|ref|YP_005684546.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis I19]
gi|385806531|ref|YP_005842928.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 267]
gi|387135644|ref|YP_005691624.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302205240|gb|ADL09582.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis C231]
gi|308275481|gb|ADO25380.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis I19]
gi|348606089|gb|AEP69362.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|380868781|gb|AFF21255.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis P54B96]
gi|383803924|gb|AFH51003.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 267]
Length = 247
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 376 ITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAV 435
+ E+ + V CR L P +Q ++ G + +M LGK+W+ + QY + G
Sbjct: 55 MVEKARAVA-CR-LAHTPLAMHQQQWKSG-TMSAHLMSLGKHWEYSSHQYVSE--WQGQE 109
Query: 436 PPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQ 495
P IP F +A + + L ++ D D + N+Y +G+HQ
Sbjct: 110 VPDIPNNFLTQAYEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQ 162
Query: 496 DKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFH 554
D E + PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFH
Sbjct: 163 DVFEESSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFH 217
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
G+++I T P + + RGR+N+TFRQ
Sbjct: 218 GIKRIDDATVP----DNCGLERGRINITFRQ 244
>gi|440703309|ref|ZP_20884247.1| putative alkylated DNA repair protein AlkB [Streptomyces
turgidiscabies Car8]
gi|440275019|gb|ELP63479.1| putative alkylated DNA repair protein AlkB [Streptomyces
turgidiscabies Car8]
Length = 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W + +++ CRD P G G + + +CLG++W
Sbjct: 13 RAEIAPGAVHVPDWLDAGRQRELLDACRDWARPPAGLRTVRTPGGGTMTARQVCLGRHWY 72
Query: 420 PETSQYGTSRPT-DGAVPPIIPV-EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP 477
P YG + DG P+ P E+ +G+ + +
Sbjct: 73 P----YGYANTVVDGDGSPVKPFPEWLGALGREAAAAAGFDSDLDY-------------- 114
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVI 536
DI + NFY A ++G+H+D DE ++ PVVS S+GD+ F +G+ V
Sbjct: 115 DIALINFYDADARMGMHRDSDEKSDA-----PVVSLSLGDTCLFRFGNTATRTRPYTDVE 169
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR HGV +++ TAP L GRLN+T R
Sbjct: 170 LRSGDLFVFGGASRLAHHGVPRVYQSTAPTEL-----GLTGRLNITLR 212
>gi|256825969|ref|YP_003149929.1| alkylated DNA repair protein [Kytococcus sedentarius DSM 20547]
gi|256689362|gb|ACV07164.1| alkylated DNA repair protein [Kytococcus sedentarius DSM 20547]
Length = 228
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 368 NYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGT 427
+++ W ++ +V+ R GP ++P R G + + M+ G W ++ Y
Sbjct: 25 HWVPGWLDAGQQAWVVRQYRRWAAGPVPAHRPAVR-GGRMSVTMVPFGWVW--TSAGYAR 81
Query: 428 SRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSA 487
+ D A P +P +L +A+ ++TG D AE +PD+ + N Y
Sbjct: 82 TGEQD-AAPLPVPDWMVRLYRRAV---------VATG-FDGWAE---AAPDVALVNHYRP 127
Query: 488 TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI-LESGDVLIFG 546
+G+H+D DE E+ PVVS S+GD+ F +G I LESGD+++FG
Sbjct: 128 DASMGMHRDADELTEA-----PVVSLSVGDACTFRFGSTETRTRPWTDIRLESGDLVVFG 182
Query: 547 GKSRRIFHGVEKIFPDTAPKSLLEETSMRR--GRLNLTFR 584
G +RR FHGV +I P TA + + GRLN+T R
Sbjct: 183 GPARRAFHGVPRIHPGTAGPQVAAAQAEAELPGRLNITLR 222
>gi|395236780|ref|ZP_10414933.1| alkylated DNA repair protein [Turicella otitidis ATCC 51513]
gi|394488035|emb|CCI83021.1| alkylated DNA repair protein [Turicella otitidis ATCC 51513]
Length = 272
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 385 ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFH 444
+ R + P +P G + + ++ LG +W +T Y R DGA P +P +
Sbjct: 86 LARQVAGTPTAMVRPEVGAG-QMSVYILSLGYHW--QTKPYRYVRSVDGARVPALPENYQ 142
Query: 445 QLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESI 504
LV + + + A+ +++S R + AE + NFY +G+H D +E
Sbjct: 143 GLVDRVLDRAAAVSDELSPWRGRMRAE-------TALVNFYPPGSHMGMHVDGNE----- 190
Query: 505 DKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGGKSRRIFHGVEKIFPDT 563
+ PVVS SIG SA F G+ + + V L SGD ++FGG +RR +HG+ + P T
Sbjct: 191 ESGAPVVSLSIGQSALFRMGNPDNRGRPYRDVSLLSGDAIVFGGPARRNYHGIPAVQPGT 250
Query: 564 APKSLLEETSMRRGRLNLTFRQ 585
P E ++ GR+N+T R+
Sbjct: 251 TP----EGCGLKDGRINITIRE 268
>gi|392399663|ref|YP_006436263.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis Cp162]
gi|390530741|gb|AFM06470.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis Cp162]
Length = 193
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 381 KIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIP 440
K + R L +Q ++ G + +M LGK+W+ + QY + G P IP
Sbjct: 4 KARAVARRLAHTSLAMHQQQWKSGM-MSAHLMSLGKHWEYNSHQYVSE--WQGQKVPDIP 60
Query: 441 VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDES 500
F +A + + L ++ D D + N+Y +G+HQD E
Sbjct: 61 NNFLTQAYEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQDVFEE 113
Query: 501 QESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKI 559
+ PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFHG+++I
Sbjct: 114 SSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKRI 168
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQ 585
T P + + RGR+N+TFRQ
Sbjct: 169 DDATVP----DNCGLERGRINITFRQ 190
>gi|398830742|ref|ZP_10588923.1| alkylated DNA repair protein [Phyllobacterium sp. YR531]
gi|398213322|gb|EJM99915.1| alkylated DNA repair protein [Phyllobacterium sp. YR531]
Length = 204
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SP+ C+ NFYS K+GLHQD+DE PVVS S+GD+ F +G + +
Sbjct: 101 SPEACLINFYSEAAKMGLHQDRDEQNLQA----PVVSVSLGDTCLFRFGGTNRNDRTQSI 156
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG+ R FHGV++I+P T+ +LL+ + GR+NLT R+
Sbjct: 157 KLSSGDVVVLGGEGRLAFHGVDRIYPGTS--TLLKNS----GRINLTLRR 200
>gi|337264923|ref|YP_004608978.1| 2OG-Fe(II) oxygenase [Mesorhizobium opportunistum WSM2075]
gi|336025233|gb|AEH84884.1| 2OG-Fe(II) oxygenase [Mesorhizobium opportunistum WSM2075]
Length = 209
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+A K+GLHQD+DE +D PVVS S+GD F G K
Sbjct: 102 PEACLINFYTAEAKMGLHQDRDE----VDFSAPVVSVSLGDDCLFRVGQTTRDGGTKSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLAFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|418246825|ref|ZP_12873216.1| DNA repair protein [Corynebacterium glutamicum ATCC 14067]
gi|354509167|gb|EHE82105.1| DNA repair protein [Corynebacterium glutamicum ATCC 14067]
Length = 161
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 411 MMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
M+ LGK+W T +Y + DG P +P F L +A+ + +L + + + A
Sbjct: 1 MLNLGKHWATNTYRYVDA--VDGFPVPPLPDSFVNLAHRALLSAGSLSNSLQSWSEAYRA 58
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF-LYGDLRDV 529
E + N+YS +G+HQD +E E+ PVVS SIGD+ F L G L
Sbjct: 59 E-------AALVNYYSPDASMGMHQDANEESEA-----PVVSLSIGDTGIFRLGGTLNRN 106
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L SGD+++FGG RR FHG+ I +TAP ++ GR+N+T RQ
Sbjct: 107 KPWTDIPLMSGDLIVFGGAHRRAFHGIPSIEANTAPAG----CGLKEGRINITIRQ 158
>gi|158425908|ref|YP_001527200.1| alkylated DNA repair protein [Azorhizobium caulinodans ORS 571]
gi|158332797|dbj|BAF90282.1| alkylated DNA repair protein [Azorhizobium caulinodans ORS 571]
Length = 266
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+ P+ C+ N+Y+ ++GLHQD+DE+ D PV+S S+GD+A F G + +
Sbjct: 161 AVPPEACLVNWYAPDARMGLHQDRDEA----DFSAPVLSVSLGDTAVFRIGGEARTDSTR 216
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ LESGDVL GG+SR FHGV++I P T+ +E GR+NLT R+
Sbjct: 217 SIRLESGDVLRLGGRSRLAFHGVDRILPGTSTLLGVE------GRINLTLRR 262
>gi|354724465|ref|ZP_09038680.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter mori
LMG 25706]
Length = 216
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y + PT G P +P F +L +A ++ G D + PD C+ N
Sbjct: 78 YAPNDPTTGKPWPPMPDAFQRLCHEA---------AVAAGYADFQ-------PDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G LR K+++LE GDV++
Sbjct: 122 YAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLRRNDPLKRLMLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG+SR +HG++ + P P++ R NLTFRQ
Sbjct: 178 WGGESRLFYHGIQPLKPGVHPQT-------GAFRFNLTFRQ 211
>gi|319780219|ref|YP_004139695.1| 2OG-Fe(II) oxygenase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166107|gb|ADV09645.1| 2OG-Fe(II) oxygenase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 209
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+A K+GLHQD+DE+ D PVVS S+GD F G K
Sbjct: 102 PEACLINFYTADAKMGLHQDRDEA----DFSAPVVSVSLGDDCLFRVGQTTRDGATKSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LQSGDVVVLGGEGRLCFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|423350296|ref|ZP_17327949.1| alkylated DNA repair protein AlkB [Turicella otitidis ATCC 51513]
gi|404387737|gb|EJZ82842.1| alkylated DNA repair protein AlkB [Turicella otitidis ATCC 51513]
Length = 229
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 385 ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFH 444
+ R + P +P G + + ++ LG +W +T Y R DGA P +P +
Sbjct: 43 LARQVAGTPTAMVRPEVGAG-QMSVYILSLGYHW--QTKPYRYVRSVDGARVPALPENYQ 99
Query: 445 QLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESI 504
LV + + + A+ +++S R + AE + NFY +G+H D +E
Sbjct: 100 GLVDRVLDRAAAVSDELSPWRGRMRAE-------TALVNFYPPGSHMGMHVDGNE----- 147
Query: 505 DKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGGKSRRIFHGVEKIFPDT 563
+ PVVS SIG SA F G+ + + V L SGD ++FGG +RR +HG+ + P T
Sbjct: 148 ESGAPVVSLSIGQSALFRMGNPDNRGRPYRDVSLLSGDAIVFGGPARRNYHGIPAVQPGT 207
Query: 564 APKSLLEETSMRRGRLNLTFRQ 585
P E ++ GR+N+T R+
Sbjct: 208 TP----EGCGLKDGRINITIRE 225
>gi|403525117|ref|YP_006660004.1| DNA repair protein [Arthrobacter sp. Rue61a]
gi|403227544|gb|AFR26966.1| putative DNA repair protein [Arthrobacter sp. Rue61a]
Length = 244
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W + ++ IV + GP G + ++ +CLG +W P
Sbjct: 24 IAPGAVHVPGWLTLEQQRWIVARFGEWTQGPVPLRAATLPGGHQMSVRTVCLGWHWQP-- 81
Query: 423 SQYGTSRPTDGAVPPII--PVEFHQLVGKAIQ------DSRALIEKISTGRKDIEAELPC 474
+Y T TD P++ P +L KA++ D ++++++ + +
Sbjct: 82 YRY-TREATDVNGRPVLDFPDWMVRLGRKALEAAYSPGDEGVELDEVTSSLSGLANQ--- 137
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-K 533
+PD + NFY+ +G+HQDKDE + PVVS SIG++ F +G+ +
Sbjct: 138 YTPDAALVNFYNDGAAMGMHQDKDERSSA-----PVVSLSIGETCVFRFGNTKTRTKPYT 192
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGD+ +FGG +R +HG+ K+ P TAP + + GR+N+T R
Sbjct: 193 DVELRSGDLFVFGGPARFSYHGIPKVLPGTAP----DGCGLSEGRINITMR 239
>gi|290962586|ref|YP_003493768.1| DNA repair protein [Streptomyces scabiei 87.22]
gi|260652112|emb|CBG75244.1| putative DNA repair protein [Streptomyces scabiei 87.22]
Length = 242
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 378 EEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD--PETSQYGTSRPTDGAV 435
++ +++ CR P G G + + +CLG++W P G + + A
Sbjct: 28 QQRRLLDACRAWARPPAGLRTVRTPGGGTMTARQVCLGRHWGVVPACPACGRAVRDNPAC 87
Query: 436 PP--IIPVEFHQLV----GKAIQDSRALIEKISTGRKDIEAEL---PCMSP-DICIANFY 485
P P + + V G ++ A + ++ GR+ + L P DI + N+Y
Sbjct: 88 PGRHTYPYAYSRTVVDGDGAPVKPFPAWLGEL--GRRAVADTLGPQRATDPYDIALINYY 145
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLI 544
A ++G+H+D DE ++ PVVS S+GD+ F +G+ R V L SGD+ +
Sbjct: 146 DADARMGMHRDSDEPSDA-----PVVSLSLGDTCLFRFGNPRTRTRPYTDVELRSGDLFV 200
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
FGG++RR +HGV +++ TAP L GRLN+T R
Sbjct: 201 FGGEARRAYHGVPRVYAGTAPPGLGLT-----GRLNITLR 235
>gi|119963370|ref|YP_945851.1| DNA repair protein [Arthrobacter aurescens TC1]
gi|119950229|gb|ABM09140.1| putative DNA repair protein [Arthrobacter aurescens TC1]
Length = 244
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W + ++ IV + GP G + ++ +CLG +W P
Sbjct: 24 IAPGAIHVPGWLTLEQQRWIVARFGEWTQGPVPLRAATLPGGHQMSVRTVCLGWHWQP-- 81
Query: 423 SQYGTSRPTDGAVPPII--PVEFHQLVGKAIQ------DSRALIEKISTGRKDIEAELPC 474
+Y T TD P++ P +L KA++ D ++++++ + +
Sbjct: 82 YRY-TREATDVNGRPVLDFPDWMVRLGRKALEAAYSPGDEGVELDEVTSSLSGLANQ--- 137
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-K 533
+PD + NFY+ +G+HQDKDE + PVVS SIG++ F +G+ +
Sbjct: 138 YTPDAALVNFYNDGAAMGMHQDKDERSSA-----PVVSLSIGETCVFRFGNTKTRTKPYT 192
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGD+ +FGG +R +HG+ K+ P TAP + + GR+N+T R
Sbjct: 193 DVELRSGDLFVFGGPARFSYHGIPKVLPGTAP----DGCGLSEGRINITMR 239
>gi|13474252|ref|NP_105820.1| alkylated DNA repair protein [Mesorhizobium loti MAFF303099]
gi|14025004|dbj|BAB51606.1| alkylated DNA repair protein [Mesorhizobium loti MAFF303099]
Length = 213
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+A K+GLHQD+DE+ D PVVS S+GD F G K
Sbjct: 102 PEACLINFYTADAKMGLHQDRDEA----DFSAPVVSVSLGDDCLFRVGQTTRDGATKSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLAFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|256824518|ref|YP_003148478.1| DNA-N1-methyladenine dioxygenase [Kytococcus sedentarius DSM 20547]
gi|256687911|gb|ACV05713.1| DNA-N1-methyladenine dioxygenase [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 359 LKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
L +++ + Y+ W + ++ IV + GP R G + ++ +CLG +W
Sbjct: 13 LTITLPEGAYYVPGWLTLEQQRWIVARFHEWTNGPVPIRAAKVR-GHEMSVRTVCLGWHW 71
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL--PCMS 476
P E + G + D + ++ GRK + P
Sbjct: 72 RPHAYTR----------------EAVDVNGNRVLDFPDWMVRL--GRKALVTATGNPYAG 113
Query: 477 ----PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN- 531
PD + N+Y ++G+HQD+DE + PVVS SIGD+ F +G+
Sbjct: 114 DGYLPDTALVNYYDDAARMGMHQDRDERSAA-----PVVSLSIGDTCRFRFGNTETRNKP 168
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ V L SGD+ +FGG SR +HG+ K++PDTAP E + GR+N+T R
Sbjct: 169 YQDVNLASGDLFVFGGPSRLAYHGIPKVYPDTAP----EGCGLADGRINITMR 217
>gi|374328832|ref|YP_005079016.1| AlkB, alkylated DNA repair protein [Pseudovibrio sp. FO-BEG1]
gi|359341620|gb|AEV34994.1| AlkB, alkylated DNA repair protein [Pseudovibrio sp. FO-BEG1]
Length = 206
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 35/222 (15%)
Query: 368 NYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGY-RDGANLYLKMMCLGK-NW--DPETS 423
Y+ ++ + E+ ++V+ R L + F+ P R G ++M LG W D
Sbjct: 12 KYLPGYFSLEEQKELVETLRYL-VKEAPFFTPVMPRTGKPFSVRMTNLGTLGWVSDRNGY 70
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y P G P IP +S R+ E E ++P+ C+ N
Sbjct: 71 RYQPQHPESGQPWPKIPEVL-----------------LSLWRQVGERE---VAPEACLVN 110
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
+Y+AT K+G+HQD+DE PVVS S+GD+A F G ++ + + L SGDV+
Sbjct: 111 YYAATAKMGMHQDRDEKTFKA----PVVSVSLGDAAVFRLGGVKRGGPTQSLKLNSGDVV 166
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ GG+SR HG+++I ++ SLL++ GRLNLT R+
Sbjct: 167 VLGGESRLCHHGIDRILGGSS--SLLKDG----GRLNLTLRR 202
>gi|90420982|ref|ZP_01228886.1| AlkB, alkylated DNA repair protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334760|gb|EAS48536.1| AlkB, alkylated DNA repair protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 203
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 35/212 (16%)
Query: 378 EEVKIVKICRDLGLGPGGFYQPGY-RDGANLYLKMMCLGK-NWDPETSQYGTSRPTDGAV 435
E+V +V R++ + Y+P R G L ++M G+ W + S Y
Sbjct: 19 EQVALVDAVREV-VAAAPLYRPEMPRTGKPLSVRMTNCGELGWVTDRSGYRYQ------- 70
Query: 436 PPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS--PDICIANFYSATGKLGL 493
P+ PV +R I +I EL P C+ NFY T K+GL
Sbjct: 71 -PVHPV------------TRTPWPAIPPKLLEIWQELAAYDHPPQACLVNFYEDTAKMGL 117
Query: 494 HQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIF 553
HQDKDE+ D PVVS S+GD F G+ + L SGDV++ GG+ R +
Sbjct: 118 HQDKDET----DLSAPVVSVSLGDDCLFRVGETTRGGRTTSIRLHSGDVVVLGGEGRLAY 173
Query: 554 HGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
HGV++I+P T+ +LL++ GR+NLT R+
Sbjct: 174 HGVDRIYPATS--TLLKKG----GRINLTLRR 199
>gi|300857503|ref|YP_003782486.1| hypothetical protein cpfrc_00086 [Corynebacterium
pseudotuberculosis FRC41]
gi|300684957|gb|ADK27879.1| hypothetical protein cpfrc_00086 [Corynebacterium
pseudotuberculosis FRC41]
Length = 245
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 376 ITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAV 435
+ E+ + V CR L P +Q ++ G + +M LGK+W+ + QY + G
Sbjct: 53 MVEKARAVA-CR-LAHTPLAMHQQQWKSG-TMSAHLMSLGKHWEYSSHQYVSE--WQGQE 107
Query: 436 PPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQ 495
P IP F +A + + L ++ D D + N+Y +G+HQ
Sbjct: 108 VPDIPNNFLTQAHEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQ 160
Query: 496 DKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFH 554
D E + PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFH
Sbjct: 161 DVFEESSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFH 215
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
G++ I T P + + +GR+N+TFRQ
Sbjct: 216 GIKHIDDATVP----DNCGLEKGRINITFRQ 242
>gi|302549454|ref|ZP_07301796.1| alkylated DNA repair protein AlkB [Streptomyces viridochromogenes
DSM 40736]
gi|302467072|gb|EFL30165.1| alkylated DNA repair protein AlkB [Streptomyces viridochromogenes
DSM 40736]
Length = 213
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ + + ++ W + +++ CR P G G + + +CLG +W
Sbjct: 10 RTEVAPGAVHVPDWLDTRHQRDLLEACRTWARPPAGLRTVRTPGGGTMTARQVCLGWHWY 69
Query: 420 PETSQYGTSRPT---DGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R DGA P +L +A++D+ L E P
Sbjct: 70 P----YAYARTVVDGDGAPVKPFPAWLGELGRRAVRDT--LGE-------------PVAD 110
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
DI + NFY ++G+H+D DE ++ PVVS S+GD+ F +G+ +
Sbjct: 111 YDIALVNFYDDDARMGMHRDSDEKSDA-----PVVSLSLGDTCVFRFGNTDTRTRPWTDL 165
Query: 537 -LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR +HGV ++ TAP L GRLN+T R
Sbjct: 166 ELRSGDLFVFGGPSRLAYHGVPRVHAGTAPPGLGLT-----GRLNITLR 209
>gi|329114059|ref|ZP_08242823.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Acetobacter pomorum
DM001]
gi|326696598|gb|EGE48275.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Acetobacter pomorum
DM001]
Length = 239
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 98/219 (44%), Gaps = 44/219 (20%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NWDPETSQYGT 427
Y+ A + IT++ K+ Y PG G + + M C G W + Y
Sbjct: 58 YMLAVHRITQQAPFRKM-----------YTPG---GGQMSVAMTCCGTFGWVSTSQGYSY 103
Query: 428 SR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
+R P G P +P F L KA Q +A P+ C+ N Y
Sbjct: 104 TRVNPFTGQPWPNMPTIFQTLAHKAAQ----------------KAGFAQFQPNACLINSY 147
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
S ++GLHQD+DE PVVS S G A FL+G L+ ++++L GDVL++
Sbjct: 148 SPGARMGLHQDRDEGCTE----QPVVSLSFGLEAVFLWGGLKRSDPTRQILLRDGDVLVW 203
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
GG R FHG++ I T ++ ET RLN+TFR
Sbjct: 204 GGPDRLRFHGIKPIRAGTHART--GET-----RLNITFR 235
>gi|302530452|ref|ZP_07282794.1| alkylated DNA repair protein AlkB [Streptomyces sp. AA4]
gi|302439347|gb|EFL11163.1| alkylated DNA repair protein AlkB [Streptomyces sp. AA4]
Length = 207
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 107/228 (46%), Gaps = 35/228 (15%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+ I + ++ W E+ +V CR G G+ G + ++ +CLG W
Sbjct: 8 RREIAPGAVHVPDWLTGEEQRDLVTACR----GWRGYRSTRLPGGGVMSVRTVCLGWQWR 63
Query: 420 PETSQYGTSRPTDGAVPPIIPV-EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
P +Y R DG+ P+ P ++ +G+ RAL + D + PD
Sbjct: 64 P--YRYERLR-EDGS--PVEPFPDWLADLGR-----RALADAYDRPADDYQ-------PD 106
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDL--RDVANAKKVI 536
+ + N+Y A K+G+HQDKDE PVVS S+GD+ F +G+ R+ A V
Sbjct: 107 VALVNYYDADAKMGMHQDKDERSTE-----PVVSLSLGDTCVFRFGNTEHRNRPYAD-VE 160
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG SR FHGV K P TA L GRLN+T R
Sbjct: 161 LRSGDLFVFGGPSRLAFHGVLKTLPGTADPDLGLT-----GRLNMTLR 203
>gi|413932644|gb|AFW67195.1| hypothetical protein ZEAMMB73_974323 [Zea mays]
Length = 65
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 50/65 (76%)
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNL 581
++GD+RD KV LESGDVLIFGG+SR IFHGV P TAPK L +ETS+R GRLNL
Sbjct: 1 MFGDVRDEEKISKVDLESGDVLIFGGESRLIFHGVNNTKPKTAPKWLTDETSLRPGRLNL 60
Query: 582 TFRQY 586
TFRQY
Sbjct: 61 TFRQY 65
>gi|84684605|ref|ZP_01012506.1| alkylated DNA repair protein, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84667584|gb|EAQ14053.1| alkylated DNA repair protein, putative [Maritimibacter alkaliphilus
HTCC2654]
Length = 201
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NW- 418
L++G + Y E E+ KIV RD+ + + P R G + + M GK W
Sbjct: 5 LTVGGAAVY-EGLIPADEQAKIVADLRDV-VSAAPLFSPETRFGKPMSVGMTSAGKYGWY 62
Query: 419 -DPETSQYGTSRPTDGAVPPI---IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPC 474
D +Y PT PPI I +H++ G A +
Sbjct: 63 SDRRGYRYERKHPTGVDWPPIPARILKLWHEVTGVARE---------------------- 100
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ NFY ++GLHQD+DE+ D PV+S S+GD F G +
Sbjct: 101 --PDCCLVNFYREKARMGLHQDRDEA----DFSWPVLSISLGDDGLFRIGGTERDGKTQS 154
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGDVL+ GG++R +HG+++I T+ LL E GR+NLT R
Sbjct: 155 VWLRSGDVLMLGGEARLAYHGIDRIRFGTS--QLLAEG----GRINLTLR 198
>gi|384503694|ref|YP_005680364.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1002]
gi|302329798|gb|ADL19992.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1002]
Length = 247
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 376 ITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAV 435
+ E+ + V CR L P +Q ++ G + +M LGK+W+ + QY + G
Sbjct: 55 MVEKARAVA-CR-LAHTPLAMHQQQWKSG-TMSAHLMSLGKHWEYSSHQYVSE--WQGQE 109
Query: 436 PPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQ 495
P IP F +A + + L ++ D D + N+Y +G+HQ
Sbjct: 110 VPDIPNNFLTQAYEAFEQAVCLDSDLAPWASDYRI-------DAALVNYYPPGSGMGMHQ 162
Query: 496 DKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVLIFGGKSRRIFH 554
D E + PVVS SIG +A F G+ + + V+L SGD L+FGG SR+IFH
Sbjct: 163 DVFEESSA-----PVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVFGGPSRKIFH 217
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
G++ I T P + + +GR+N+TFRQ
Sbjct: 218 GIKHIDDATVP----DNCGLEKGRINITFRQ 244
>gi|146339598|ref|YP_001204646.1| alkylated DNA repair protein AlkB [Bradyrhizobium sp. ORS 278]
gi|146192404|emb|CAL76409.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 278]
Length = 219
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P G P +P F Q+ A + EA
Sbjct: 72 ALGWVTDRSGYRYDAVDPESGQPWPAMPPLFRQIAENAAR----------------EAGF 115
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y K+ LHQD+DE D P+VS S+G A FL+G LR
Sbjct: 116 PGFAPDACLINRYEPGAKMSLHQDRDER----DVGAPIVSVSLGLPATFLFGGLRRTDKT 171
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG +R FHGV AP + E + R R+NLTFR+
Sbjct: 172 QRYRLVHGDVVVWGGPARLAFHGV-------APLADGEHARLGRRRINLTFRR 217
>gi|229488753|ref|ZP_04382619.1| alkylated DNA repair protein [Rhodococcus erythropolis SK121]
gi|229324257|gb|EEN90012.1| alkylated DNA repair protein [Rhodococcus erythropolis SK121]
Length = 221
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+L + + + W + ++ +V CR P G + ++ +CLG +W
Sbjct: 12 RLEVAPGAILVPDWLSVEQQRFLVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQ 71
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R D GA +P L A+ A + + G + +
Sbjct: 72 P----YKYTRTADDVNGAPVAAVPDWLVDLGRAAVA---AAYDDPTAGER--------YT 116
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY ++G+HQDKDE ++ PVVS S+G S F +G+ + V
Sbjct: 117 PDTALINFYDEGARMGMHQDKDERCDA-----PVVSLSVGQSCVFRFGNSENRNKPYTDV 171
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG+SR +HGV K+ +A + + GRLN+T R
Sbjct: 172 ELHSGDLFVFGGESRFAYHGVPKVIAGSASPDI----GLPSGRLNITLR 216
>gi|441521564|ref|ZP_21003223.1| putative alkylated DNA repair protein [Gordonia sihwensis NBRC
108236]
gi|441458787|dbj|GAC61184.1| putative alkylated DNA repair protein [Gordonia sihwensis NBRC
108236]
Length = 186
Score = 88.6 bits (218), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KK 534
+PD + N+Y A ++G+HQD+DE PVVS SIGD+A F +G+ + + +
Sbjct: 80 TPDTALVNYYDAGARMGMHQDRDEVSRE-----PVVSLSIGDTARFRFGNTENRSRPYRD 134
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
LESGD+ +FGG R +HGV++I P TAP ++ + GR+N+T R
Sbjct: 135 FDLESGDLFVFGGPLRLAYHGVQRIHPGTAP----DDCGLAAGRINITMR 180
>gi|408376113|ref|ZP_11173718.1| 2OG-Fe(II) oxygenase [Agrobacterium albertimagni AOL15]
gi|407749580|gb|EKF61091.1| 2OG-Fe(II) oxygenase [Agrobacterium albertimagni AOL15]
Length = 209
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+ K+GLHQD+DE++ + PV+S S+G++ F G L + +
Sbjct: 108 PEACLVNFYADDAKMGLHQDRDETEFAA----PVLSISLGNTCLFRIGGLARTDRTQSLK 163
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV + GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 164 LESGDVFLLGGEGRLCFHGVDRIYPGTS--TLLKSG----GRINLTLRR 206
>gi|150398448|ref|YP_001328915.1| 2OG-Fe(II) oxygenase [Sinorhizobium medicae WSM419]
gi|150029963|gb|ABR62080.1| 2OG-Fe(II) oxygenase [Sinorhizobium medicae WSM419]
Length = 203
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+P+ C+ NFYSA ++GLHQD+DE D VVS S+GDS F G +
Sbjct: 101 TPEACLVNFYSAEARMGLHQDRDER----DLDTAVVSVSLGDSCLFRVGGRTRGGPTVSL 156
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL GRLNLT R+
Sbjct: 157 KLESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLRSG----GRLNLTLRR 200
>gi|407722391|ref|YP_006842053.1| alkylated DNA repair protein [Sinorhizobium meliloti Rm41]
gi|418402737|ref|ZP_12976243.1| alkylated DNA repair protein [Sinorhizobium meliloti CCNWSX0020]
gi|359503314|gb|EHK75870.1| alkylated DNA repair protein [Sinorhizobium meliloti CCNWSX0020]
gi|407320623|emb|CCM69227.1| alkylated DNA repair protein [Sinorhizobium meliloti Rm41]
Length = 203
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SP+ C+ NFYSA ++GLHQD+DE D VVS S+GD F G
Sbjct: 101 SPEACLVNFYSAEARMGLHQDRDER----DLETAVVSISLGDDCLFRVGGRTRGGQTVSF 156
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL GRLNLT R+
Sbjct: 157 RLESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLRSG----GRLNLTLRR 200
>gi|334318080|ref|YP_004550699.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti AK83]
gi|384531205|ref|YP_005715293.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti BL225C]
gi|384537923|ref|YP_005722008.1| Alkylated DNA repair protein [Sinorhizobium meliloti SM11]
gi|433611842|ref|YP_007188640.1| Alkylated DNA repair protein [Sinorhizobium meliloti GR4]
gi|333813381|gb|AEG06050.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti BL225C]
gi|334097074|gb|AEG55085.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti AK83]
gi|336034815|gb|AEH80747.1| Alkylated DNA repair protein [Sinorhizobium meliloti SM11]
gi|429550032|gb|AGA05041.1| Alkylated DNA repair protein [Sinorhizobium meliloti GR4]
Length = 203
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SP+ C+ NFYSA ++GLHQD+DE D VVS S+GD F G
Sbjct: 101 SPEACLVNFYSAEARMGLHQDRDER----DLETAVVSISLGDDCLFRVGGRTRGGQTVSF 156
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL GRLNLT R+
Sbjct: 157 RLESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLRSG----GRLNLTLRR 200
>gi|15963801|ref|NP_384154.1| alkylated DNA repair protein [Sinorhizobium meliloti 1021]
gi|15072976|emb|CAC41435.1| Probable DNA repair system specific for alkylated DNA protein
[Sinorhizobium meliloti 1021]
Length = 206
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SP+ C+ NFYSA ++GLHQD+DE D VVS S+GD F G
Sbjct: 104 SPEACLVNFYSAEARMGLHQDRDER----DLETAVVSISLGDDCLFRVGGRTRGGQTVSF 159
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL GRLNLT R+
Sbjct: 160 RLESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLRSG----GRLNLTLRR 203
>gi|319950140|ref|ZP_08024076.1| alkylated DNA repair protein [Dietzia cinnamea P4]
gi|319436181|gb|EFV91365.1| alkylated DNA repair protein [Dietzia cinnamea P4]
Length = 225
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KK 534
+PD + N Y +GLHQD+DE+ + PVVSFS+GD+ F +G
Sbjct: 115 TPDAALVNLYGRGATMGLHQDRDEASLA-----PVVSFSLGDACTFRFGTPEHRGRPYTD 169
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V LESGD+++FGG SR FHGV K+F TAP E GR+N+T R
Sbjct: 170 VRLESGDLVVFGGPSRMAFHGVPKVFDSTAPSWCREVLGAEPGRVNITLRM 220
>gi|326382774|ref|ZP_08204464.1| alkylated DNA repair protein [Gordonia neofelifaecis NRRL B-59395]
gi|326198364|gb|EGD55548.1| alkylated DNA repair protein [Gordonia neofelifaecis NRRL B-59395]
Length = 221
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 27/187 (14%)
Query: 402 RDGAN-LYLKMMCLGKNWDP-ETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIE 459
R GA+ + ++ +CLG +W P E ++ T +G P +L A+
Sbjct: 54 RIGAHRMSVQTVCLGWHWRPYEYTREATD--VNGRRVLAFPEWLVRLGRLAL-------- 103
Query: 460 KISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSA 519
T D A+L +PD + NFY ++G+HQD+DE + PVVS SIGD+A
Sbjct: 104 ---TAAGDPAADL--YTPDTALVNFYDDAARMGMHQDRDERSSA-----PVVSLSIGDTA 153
Query: 520 EFLYGDLRDVANAKKVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGR 578
F +G+ + LESGD+ +FGG +R +HGV+K+ P TAP + + GR
Sbjct: 154 RFRFGNSDGRGRPYTDLDLESGDLFVFGGPARFAYHGVQKVLPGTAPV----DCGLAAGR 209
Query: 579 LNLTFRQ 585
+N+T R+
Sbjct: 210 INITLRE 216
>gi|453069025|ref|ZP_21972294.1| alkylated DNA repair protein [Rhodococcus qingshengii BKS 20-40]
gi|452764474|gb|EME22742.1| alkylated DNA repair protein [Rhodococcus qingshengii BKS 20-40]
Length = 218
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+L + + + W + ++ +V CR P G + ++ +CLG +W
Sbjct: 9 RLEVAPGAILVPDWLSVEQQRFLVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQ 68
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R D GA +P L A+ A + + G + +
Sbjct: 69 P----YKYTRTADDVNGAPVAAVPDWLVDLGRAAVA---AAYDDPTAGER--------YT 113
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY ++G+HQDKDE ++ PVVS S+G S F +G+ + V
Sbjct: 114 PDTALINFYDEGARMGMHQDKDERCDA-----PVVSLSVGQSCVFRFGNSENRNKPYTDV 168
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+ +FGG+SR +HGV K+ +A + + GRLN+T R+
Sbjct: 169 ELYSGDLFVFGGESRFAYHGVPKVIAGSASPDI----GLPSGRLNITLRE 214
>gi|357024847|ref|ZP_09086984.1| alkylated DNA repair protein [Mesorhizobium amorphae CCNWGS0123]
gi|355543247|gb|EHH12386.1| alkylated DNA repair protein [Mesorhizobium amorphae CCNWGS0123]
Length = 205
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P C+ NFYS+ K+GLHQD+DE+ D PVVS S+GD F G +
Sbjct: 102 PQACLVNFYSSEAKMGLHQDRDEA----DFSAPVVSVSLGDDCLFRVGQTTRDGATRSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LRSGDVVVLGGEGRLCFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|345300114|ref|YP_004829472.1| 2OG-Fe(II) oxygenase [Enterobacter asburiae LF7a]
gi|345094051|gb|AEN65687.1| 2OG-Fe(II) oxygenase [Enterobacter asburiae LF7a]
Length = 216
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 82/172 (47%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F L A ++ G D
Sbjct: 67 LGWTTDDRGYLYAPLDPITGNPWPAMPDAFQALCHDA---------AVAAGYADF----- 112
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 113 --TPDACLVNRYAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GDV+++GG+SR +HG++ + P P++ + R NLTFRQ
Sbjct: 167 RLMLEHGDVVVWGGESRLYYHGIQPLKPGFHPQA-------QAFRYNLTFRQ 211
>gi|384509973|ref|YP_005689551.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis PAT10]
gi|341823912|gb|AEK91433.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis PAT10]
Length = 160
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 412 MCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAE 471
M LGK+W+ + QY + G P IP F +A + + L ++ D
Sbjct: 1 MSLGKHWEYSSHQYVSE--WQGQEVPDIPNNFLTQAYEAFEQAVCLDSDLAPWASDYRI- 57
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
D + N+Y +G+HQD E + PVVS SIG +A F G+ +
Sbjct: 58 ------DAALVNYYPPGSGMGMHQDVFEESSA-----PVVSLSIGATAVFRAGNSENRNK 106
Query: 532 -AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ V+L SGD L+FGG SR+IFHG+++I T P + + RGR+N+TFRQ
Sbjct: 107 PWQDVLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 157
>gi|409402369|ref|ZP_11251935.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidocella sp.
MX-AZ02]
gi|409129000|gb|EKM98872.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidocella sp.
MX-AZ02]
Length = 209
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D + +Y S P G P++PV F L +A Q
Sbjct: 60 CGAVGWVSDAKGYRYQASDPYTGLPWPMMPVIFRDLAQRAAQ----------------AG 103
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD+ + N Y K+ LHQD DE D P+VS S+G A FL+G +
Sbjct: 104 GFAGFAPDVALINRYEPGAKMSLHQDVDEQ----DFSAPIVSVSLGLPAMFLWGGAKRTD 159
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
A ++ L SGDVL++GG +RR FHG+ + T P + R+NLTFR
Sbjct: 160 KAARIALASGDVLVWGGPARRHFHGIAPVKAGTHPLT-------GAARVNLTFR 206
>gi|345852114|ref|ZP_08805066.1| alkylated DNA repair protein [Streptomyces zinciresistens K42]
gi|345636394|gb|EGX57949.1| alkylated DNA repair protein [Streptomyces zinciresistens K42]
Length = 237
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 29/236 (12%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
+ + ++ W + +++ CR P G G + + +CLG++W P
Sbjct: 13 VAPGAVHLPDWLDGPAQRRLLDACRQWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP-- 70
Query: 423 SQYGTSRPT--DGAVPPI--IPVEFHQLVGKAIQDSRALIEKI---------STGRKDIE 469
YG + PT DG P+ P L A++D+ +G
Sbjct: 71 --YGYA-PTAVDGDGSPVKPFPPWLGDLARHAVRDAYGPPGGGAGTPGEPNPQSGAAPAA 127
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
+ DI + NFY A ++G+H+D DE + PVVS S+GD+ F +G+
Sbjct: 128 PAASEPAYDIALINFYDADARMGMHRDSDEKALA-----PVVSLSLGDTCVFRFGNTETR 182
Query: 530 ANA-KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L GD+ +FGG +R FHGV ++ P T P L GRLN+T R
Sbjct: 183 TRPYTDVELRGGDLFVFGGPARLAFHGVPRVLPGTGPPELGLS-----GRLNITLR 233
>gi|83945054|ref|ZP_00957420.1| alkylated DNA repair protein [Oceanicaulis sp. HTCC2633]
gi|83851836|gb|EAP89691.1| alkylated DNA repair protein [Oceanicaulis sp. HTCC2633]
Length = 221
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P C+ N+Y ++GLH D DE + PVVS S+GDSA F G + V
Sbjct: 117 PQACLVNWYGPDARMGLHVDADEDAQDA----PVVSVSLGDSARFRLGGPDRKGPTRSVR 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG+SRR HGV++IF A S L R GRLNLT R+
Sbjct: 173 LNSGDVVVLGGRSRRFHHGVDRIF---AGSSTLLPEDWRPGRLNLTLRR 218
>gi|405376958|ref|ZP_11030907.1| alkylated DNA repair protein [Rhizobium sp. CF142]
gi|397326511|gb|EJJ30827.1| alkylated DNA repair protein [Rhizobium sp. CF142]
Length = 203
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE+ D+ PVVS S+G++ F G L
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDEN----DRKAPVVSISLGNACLFRVGGLNRNDKTMSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD++I GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVILGGEGRLFFHGVDRIYPATS--TLLKNG----GRINLTLRR 200
>gi|421081230|ref|ZP_15542144.1| Alkylated DNA repair protein AlkB [Pectobacterium wasabiae CFBP
3304]
gi|401704240|gb|EJS94449.1| Alkylated DNA repair protein AlkB [Pectobacterium wasabiae CFBP
3304]
Length = 218
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y + P G P +P F +L +A D+ G D E
Sbjct: 70 LGWVTDEQGYRYTSRDPLSGEAWPAMPEAFSRLAKQAAGDA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A+
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFRQPIVSVSLGLSATFLFGGMVRSDKAQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + + P+ + +E R NLTFR+
Sbjct: 170 RVPLTHGDVVVWGGESRLYFHGILPLKSGSVPEGMPDEC-----RFNLTFRK 216
>gi|378828130|ref|YP_005190862.1| 2OG-Fe(II) oxygenase [Sinorhizobium fredii HH103]
gi|365181182|emb|CCE98037.1| 2OG-Fe(II) oxygenase domain protein [Sinorhizobium fredii HH103]
Length = 203
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYSA ++GLHQD+DE D VVS S+GDS F G
Sbjct: 102 PEACLVNFYSADARMGLHQDRDER----DLETAVVSISLGDSCLFRVGGRTRGGQTMSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL+ GR+NLT R+
Sbjct: 158 LESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLKNG----GRVNLTLRR 200
>gi|433772340|ref|YP_007302807.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
gi|433664355|gb|AGB43431.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
Length = 203
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY K+GLHQD+DE+ D PVVS S+GD F G K
Sbjct: 102 PEACLVNFYGQDAKMGLHQDRDEA----DLSAPVVSVSLGDDCLFRVGPTTRDGGTKSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLCFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|73538928|ref|YP_299295.1| DNA-N1-methyladenine dioxygenase [Ralstonia eutropha JMP134]
gi|72122265|gb|AAZ64451.1| DNA-N1-methyladenine dioxygenase [Ralstonia eutropha JMP134]
Length = 223
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P DG P +P F L +A EA
Sbjct: 74 CGQAGWVSDRTGYRYDPCDPLDGEPWPAMPAAFLDLATRAAA----------------EA 117
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
C +PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G LR
Sbjct: 118 GFACFAPDACLINRYEPGTRLSLHQDRDER----DLRAPIVSVSLGLPAVFLFGGLRRAD 173
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR FHGV AP + + + + R+NLTFR+
Sbjct: 174 RPARIRLAHGDVVVWGGPSRLAFHGV-------APLADGDHPLLGQKRINLTFRR 221
>gi|407778191|ref|ZP_11125456.1| 2OG-Fe(II) oxygenase [Nitratireductor pacificus pht-3B]
gi|407299872|gb|EKF18999.1| 2OG-Fe(II) oxygenase [Nitratireductor pacificus pht-3B]
Length = 208
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+P+ C+ NFY K+GLHQD+DE + S PVVS S+GD+ F G + V
Sbjct: 101 APEACLVNFYGEGAKMGLHQDRDEQEFSA----PVVSVSLGDTCLFRAGGPKRGDKTVSV 156
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 157 KLQSGDVVVMGGAGRLAFHGVDRIYPGTS--TLLKSP----GRINLTLRR 200
>gi|226188009|dbj|BAH36113.1| putative alkylated DNA repair protein [Rhodococcus erythropolis
PR4]
Length = 221
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 360 KLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWD 419
+L + + + W + ++ V CR P G + ++ +CLG +W
Sbjct: 12 RLEVAPGAILVPDWLSVEQQRFWVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQ 71
Query: 420 PETSQYGTSRPTD---GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
P Y +R D GA +P L A+ A + + G + +
Sbjct: 72 P----YKYTRTADDVNGAPVAAVPDWLVDLGRAAVA---AAYDDPTAGER--------YT 116
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
PD + NFY ++G+HQDKDE ++ PVVS S+G S F +G+ + V
Sbjct: 117 PDTALINFYDEGARMGMHQDKDERCDA-----PVVSLSVGQSCVFRFGNSENRNKPYTDV 171
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+ +FGG+SR +HGV K+ +A + + GRLN+T R
Sbjct: 172 ELHSGDLFVFGGESRFAYHGVPKVIAGSASPDI----GLPSGRLNITLR 216
>gi|433771782|ref|YP_007302249.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
gi|433663797|gb|AGB42873.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
Length = 209
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P C+ NFY+ K+GLHQD+DE+ D PVVS S+GD F G K
Sbjct: 102 PQACLINFYTPEAKMGLHQDRDEA----DFSAPVVSVSLGDDCLFRVGQTTRDGATKSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLAFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|261820346|ref|YP_003258452.1| 2OG-Fe(II) oxygenase [Pectobacterium wasabiae WPP163]
gi|261604359|gb|ACX86845.1| 2OG-Fe(II) oxygenase [Pectobacterium wasabiae WPP163]
Length = 218
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y + P G P +P F +L +A EA
Sbjct: 70 LGWVTDEQGYRYTSHDPLSGEAWPAMPEVFSRLAQQAAS----------------EAGFA 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A+
Sbjct: 114 AFEPDACLINRYDVGTRMSLHQDKNER----DFRQPIVSASLGLSATFLFGGMARSDRAQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + + P+ + +E R NLTFR+
Sbjct: 170 RVPLTHGDVVVWGGESRLYFHGILPLKNGSVPQGMTDEC-----RFNLTFRK 216
>gi|359788439|ref|ZP_09291416.1| alkylated DNA repair protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255904|gb|EHK58797.1| alkylated DNA repair protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 209
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+ K+GLHQD+DE +D PV+S S+GD F G K
Sbjct: 106 PEACLVNFYTDAAKMGLHQDRDE----LDLAAPVLSVSLGDDCLFRVGQTSRDGQTKSFR 161
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 162 LRSGDLVVLGGEGRLAFHGVDRIYPATS--TLLKNG----GRINLTLRR 204
>gi|227823907|ref|YP_002827880.1| 2OG-Fe(II) oxygenase [Sinorhizobium fredii NGR234]
gi|227342909|gb|ACP27127.1| 2OG-Fe(II) oxygenase domain protein [Sinorhizobium fredii NGR234]
Length = 203
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYSA ++GLHQD+DE D VVS S+GD+ F G
Sbjct: 102 PEACLVNFYSAEARMGLHQDRDER----DLETAVVSISLGDTCLFRVGGRTRGGQTMSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL+ GR+NLT R+
Sbjct: 158 LESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLKNG----GRVNLTLRR 200
>gi|168054098|ref|XP_001779470.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669155|gb|EDQ55748.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 697
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 94/223 (42%), Gaps = 56/223 (25%)
Query: 396 FYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSR 455
F +P G +L M G +WD +T +Y P G PV + L + D++
Sbjct: 492 FKRPTTASGGKYHLWQMAFGCSWDSKTRRYAA--PERGLR---FPVWMYDLGRELAFDAQ 546
Query: 456 ALIEKISTGRKDIEAELPCMSPDICIANFYSATGK------LGLHQDKDESQESIDKC-L 508
+ G PD+ + NFY A + LG HQD D D C +
Sbjct: 547 KHTPVYAQGSN--------FEPDVALVNFYPAKDEELGVVGLGGHQDLD------DYCDM 592
Query: 509 PVVSFSIGDSAEFLYGDL------------------------RDVAN--AKKVILESGDV 542
PVVS S+GDS F Y D A+ KK+IL SGDV
Sbjct: 593 PVVSVSVGDSMTFFYRRFPPQSRRKSGVQIIVDEYAAQCCKDGDTAHNSEKKIILASGDV 652
Query: 543 LIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+FGG+SR ++HG + P T P L M GRLN TFRQ
Sbjct: 653 LVFGGESRLVYHGTRCVQPGTRPPGL----HMAPGRLNFTFRQ 691
>gi|271499400|ref|YP_003332425.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech586]
gi|270342955|gb|ACZ75720.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech586]
Length = 217
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 83/171 (48%), Gaps = 25/171 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F QL A +++ G D
Sbjct: 70 LGWVSDEHGYRYSAQDPLSGQPWPAMPACFLQLSQAAAREA---------GYHDF----- 115
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y+ KL LHQDKDE +D P+VS S+G SA FL+G ++ +
Sbjct: 116 --TPDACLINRYAVGAKLSLHQDKDE----LDLRQPIVSVSLGLSAVFLFGGMKRSDPCQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++ L GDV+++GG SR +H + + P +L+E RLNLTFR
Sbjct: 170 RLTLMHGDVVVWGGPSRLCYHAILPLKRGPLPMGILDEV-----RLNLTFR 215
>gi|429101099|ref|ZP_19163073.1| Alkylated DNA repair protein AlkB [Cronobacter turicensis 564]
gi|426287748|emb|CCJ89186.1| Alkylated DNA repair protein AlkB [Cronobacter turicensis 564]
Length = 214
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P GA P +P F RAL + R+ A P +PD C+ N
Sbjct: 78 YAQVDPQTGAPWPAMPDAF-----------RALCD-----RRRGAAGYPDFTPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG++ + P P S R NLTFRQ
Sbjct: 178 WGGPSRLFYHGIQPLKPGQHP-------STGEYRYNLTFRQ 211
>gi|375287673|ref|YP_005122214.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371574962|gb|AEX38565.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 165
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 411 MMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
+M LGK+W+ + QY + G P IP F +A + + L ++ D
Sbjct: 5 LMSLGKHWEYSSHQYVSE--WQGQEVPDIPNNFLTQAYEAFEQAVCLDSDLAPWASDYRI 62
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
D + N+Y +G+HQD E + PVVS SIG +A F G+ +
Sbjct: 63 -------DAALVNYYPPGSGMGMHQDVFEESSA-----PVVSLSIGATAVFRAGNSENRN 110
Query: 531 N-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ V+L SGD L+FGG SR+IFHG++ I T P + + +GR+N+TFRQ
Sbjct: 111 KPWQDVLLLSGDALVFGGPSRKIFHGIKHIDDATVP----DNCGLEKGRINITFRQ 162
>gi|254470945|ref|ZP_05084348.1| alkylated DNA repair protein [Pseudovibrio sp. JE062]
gi|211960087|gb|EEA95284.1| alkylated DNA repair protein [Pseudovibrio sp. JE062]
Length = 206
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 33/221 (14%)
Query: 368 NYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NW--DPETSQ 424
Y+ ++ + E+ ++V+ R L F R G ++M LG W D +
Sbjct: 12 KYLPGYFSLEEQKELVETLRYLVKEAPLFTPVMPRTGKPFSVRMTNLGSLGWVSDRNGYR 71
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P G P IP E + K + + A +P+ C+ N+
Sbjct: 72 YQPQHPESGQPWPEIP-EVLLSLWKQVGECEA-------------------APEACLVNY 111
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+AT K+G+HQD+DE PVVS S+GD+A F G ++ + + L SGDV++
Sbjct: 112 YAATAKMGMHQDRDEKTFEA----PVVSVSLGDTAVFRLGSVKRGGPTQSLKLSSGDVVV 167
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GG SR HG+++I ++ SLL++ GRLNLT R+
Sbjct: 168 LGGASRLCHHGIDRILGGSS--SLLKDG----GRLNLTLRR 202
>gi|354599032|ref|ZP_09017049.1| 2OG-Fe(II) oxygenase [Brenneria sp. EniD312]
gi|353676967|gb|EHD23000.1| 2OG-Fe(II) oxygenase [Brenneria sp. EniD312]
Length = 219
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 82/172 (47%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F QL KA ++ G D E
Sbjct: 70 LGWVTDETGYRYSPVDPLGGKPWPAMPEIFSQLAKKAAAEA---------GFVDFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y +L LHQDKDE D+ P+VSFS+G SA FL+G + +
Sbjct: 117 ---PDACLINRYEVGARLSLHQDKDEH----DRRQPIVSFSLGLSAVFLFGGMARNDRVR 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +HG+ + + P L E R NLTFR+
Sbjct: 170 RLPLTHGDVVVWGGASRLRYHGISPLKGGSVPSYLPGEY-----RFNLTFRK 216
>gi|385870520|gb|AFI89040.1| Alkylated DNA repair protein AlkB [Pectobacterium sp. SCC3193]
Length = 218
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y + P G P +P F +L +A ++ G D E
Sbjct: 70 LGWVTDEQGYRYTSHDPLSGEAWPAMPEAFSRLAQQAAGEA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A+
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFRQPIVSVSLGLSATFLFGGMVRSDRAQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + + P+ + +E R NLTFR+
Sbjct: 170 RVPLTHGDVVVWGGESRLYFHGILPLKNGSVPQGMTDEC-----RFNLTFRK 216
>gi|163745057|ref|ZP_02152417.1| 2OG-Fe(II) oxygenase [Oceanibulbus indolifex HEL-45]
gi|161381875|gb|EDQ06284.1| 2OG-Fe(II) oxygenase [Oceanibulbus indolifex HEL-45]
Length = 200
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 34/192 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
F++P G + ++M G+ W D +Y P DG P IP AI
Sbjct: 37 FFRPEVPRGGRMSVRMTAAGRYGWFSDRRGYRYVAEHP-DGQTWPEIPAPI-----LAIW 90
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D +E+ P+ C+ N+Y A ++GLHQD+DE+ D PVVS
Sbjct: 91 DQLTGLER---------------RPECCLINYYDADARMGLHQDRDEA----DFQWPVVS 131
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD F G+L + + L+SGDV++ GG +R +HGV++I T+ +LL +
Sbjct: 132 VSLGDDGLFRIGNLTRGGKTESIWLQSGDVVVMGGDARLTYHGVDRIKSGTS--TLLPKG 189
Query: 573 SMRRGRLNLTFR 584
GR+NLT R
Sbjct: 190 ----GRINLTLR 197
>gi|409439665|ref|ZP_11266714.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Rhizobium mesoamericanum STM3625]
gi|408749041|emb|CCM77895.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Rhizobium mesoamericanum STM3625]
Length = 202
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 101 PQACLVNFYSDEARMGLHQDKDEQ----DLAAPVVSISLGNSCLFRVGGLAHNDRTLSFR 156
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV+I G + R FHGV+KI+P T+ +LL+ GR+NLT R+
Sbjct: 157 LSSGDVVILGAEGRLCFHGVDKIYPSTS--TLLKNG----GRINLTLRR 199
>gi|456356557|dbj|BAM91002.1| alkylated DNA repair protein AlkB [Agromonas oligotrophica S58]
Length = 220
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P G P +P F +L +A + EA
Sbjct: 71 CGSFGWVTDRSGYRYDPVDPESGKPWPAMPPLFRKLAEQAAR----------------EA 114
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P +PD C+ N Y K+ LHQD+DE D P+VS S+G A FL+G L+
Sbjct: 115 GFPGFAPDACLINRYEPGAKMSLHQDRDER----DIGAPIVSVSLGLPATFLFGGLKRTD 170
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A++ L GDV+++GG +R FHGV AP + E + R R+NLTFR+
Sbjct: 171 KAQRYRLLHGDVVVWGGPARLAFHGV-------APLADGEHGLLGRRRINLTFRR 218
>gi|392980003|ref|YP_006478591.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392325936|gb|AFM60889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 216
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P G P +P F L A +EA P PD C+ N
Sbjct: 78 YAADDPVTGQPWPPMPAVFQALCHDAA----------------VEATYPDFQPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y KL LHQDKDE D P+VS S+G A F +G LR ++++LE GDV++
Sbjct: 122 YGVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLRRNDPLQRLMLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+G +SR +HG++ + P P++ R NLTFRQ
Sbjct: 178 WGRESRLYYHGIQPLKPGVHPQT-------GEFRFNLTFRQ 211
>gi|403057256|ref|YP_006645473.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804582|gb|AFR02220.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 218
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F QL +A ++ G D E
Sbjct: 70 LGWVTDERGYRYTAHDPLSGEAWPAMPEVFSQLAKQAASEA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFHQPIVSVSLGLSATFLFGGMARSDKAL 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + P+ + +E R NLTFR+
Sbjct: 170 RVALTHGDVVVWGGESRLYFHGILPLKSGRMPEGMPDEC-----RFNLTFRK 216
>gi|401764509|ref|YP_006579516.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400176043|gb|AFP70892.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 218
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y + P G P +P F L +A + A+ P PD C+ N
Sbjct: 78 YAPNDPATGQPWPPMPAVFQALCHEAA----------------VAADYPDFRPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G LR K+++LE GDV++
Sbjct: 122 YAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLRRNDPLKRIMLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+G +SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGRESRLYYHGIQPLKPGVHPLT-------GEYRFNLTFRQ 211
>gi|149374533|ref|ZP_01892307.1| 2OG-Fe(II) oxygenase [Marinobacter algicola DG893]
gi|149361236|gb|EDM49686.1| 2OG-Fe(II) oxygenase [Marinobacter algicola DG893]
Length = 216
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 30/185 (16%)
Query: 404 GANLYLKMMCLGK-NWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + + M C G+ W +T Y R P G P++P F L A++
Sbjct: 57 GHTMSVAMTCCGEWGWVTDTRGYRYQRTDPLSGEPWPLMPTMFRSL---------AVMAA 107
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+ G E PD C+ N Y+ K+GLHQDKDE + D+ P+VS S+G A
Sbjct: 108 SAAGYSKFE-------PDACLVNRYAPGAKMGLHQDKDE--DDFDQ--PIVSVSLGTPAM 156
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F +G R ++V LE+GDV+++GG +R +HGV + A SL ++ R N
Sbjct: 157 FQFGGARRSDRPQRVPLENGDVVVWGGPARLRYHGVLTL--KQAQHSLTGDS-----RYN 209
Query: 581 LTFRQ 585
LTFR+
Sbjct: 210 LTFRR 214
>gi|298293784|ref|YP_003695723.1| 2OG-Fe(II) oxygenase [Starkeya novella DSM 506]
gi|296930295|gb|ADH91104.1| 2OG-Fe(II) oxygenase [Starkeya novella DSM 506]
Length = 214
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 10/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+ P+ C+ N+Y+ ++GLHQD+DE + + PV+S S+GD+A F G +
Sbjct: 102 LQPEACLINWYAPGTRMGLHQDRDEEEFAA----PVLSLSLGDTALFRVGGTSRKDPTRS 157
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L SGD L+ G +R FHG+++I PDT+ +LL+++ GR+NLT R+
Sbjct: 158 IRLASGDALLLSGPARLAFHGIDRILPDTS--TLLKQS----GRINLTLRR 202
>gi|261340627|ref|ZP_05968485.1| alkylated DNA repair protein AlkB [Enterobacter cancerogenus ATCC
35316]
gi|288317040|gb|EFC55978.1| alkylated DNA repair protein AlkB [Enterobacter cancerogenus ATCC
35316]
Length = 216
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P G P +P F L +A IEA P PD C+ N
Sbjct: 78 YAPKDPVTGHPWPPVPAVFEALCHEA----------------AIEAGYPEFQPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRSDPLKRLMLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+G +SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGRESRLYYHGIQPLKPGVHPMT-------GEYRYNLTFRQ 211
>gi|420238105|ref|ZP_14742535.1| alkylated DNA repair protein [Rhizobium sp. CF080]
gi|398088703|gb|EJL79260.1| alkylated DNA repair protein [Rhizobium sp. CF080]
Length = 213
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQD+DE+ D PV+S S+G+S F G L + +
Sbjct: 102 PEACLINFYSDDARMGLHQDRDEN----DLAAPVLSVSLGNSCLFRVGGLNRKDSTCSLR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LASGDVVVLGGEGRLAFHGVDRIYPGTS--TLLKNG----GRINLTLRR 200
>gi|227329148|ref|ZP_03833172.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 218
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F +L +A ++ G D E
Sbjct: 70 LGWVTDERGYRYTAQDPLSGEPWPAMPEAFSRLAKQAASEA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A+
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFHQPIVSVSLGLSATFLFGGMARSDKAQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + + P+ + +E R NLTFR+
Sbjct: 170 RVPLTHGDVVVWGGESRLYFHGILPLKSGSVPEGMSDEC-----RFNLTFRK 216
>gi|414078209|ref|YP_006997527.1| alkylated DNA repair protein [Anabaena sp. 90]
gi|414078601|ref|YP_006997919.1| 2OG-Fe(II) oxygenase [Anabaena sp. 90]
gi|413971625|gb|AFW95714.1| alkylated DNA repair protein [Anabaena sp. 90]
gi|413972017|gb|AFW96106.1| 2OG-Fe(II) oxygenase [Anabaena sp. 90]
Length = 197
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 30/220 (13%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NWDPETSQYGT 427
+++ + +++ +I++ CR++G + P ++G+ +M GK W + + Y
Sbjct: 3 HLQQYLSESQQQEILQHCREIG-KRSPLFSPTMKNGSPFNYQMTNCGKVGWISDQNGY-- 59
Query: 428 SRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP--CMSPDICIANFY 485
R D H + K Q +I ++ K + AE+ P+ C+ N+Y
Sbjct: 60 -RYDDK----------HPVTNKPWQPIPGVIRNLA---KSLAAEVGDYNYKPETCLINYY 105
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
+ + KLGLHQD E +++ P++S S+GD FL G R K++IL+SGD+LI
Sbjct: 106 TQSSKLGLHQDNTE----VNQKSPIISISLGDDGIFLIGGKRRKDPTKEIILKSGDILIL 161
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
G+ R +HG++ I T+ +LL+ GRLNLT RQ
Sbjct: 162 HGEFRMFYHGIKGIIHGTS--NLLKSG----GRLNLTIRQ 195
>gi|260598661|ref|YP_003211232.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
turicensis z3032]
gi|260217838|emb|CBA32345.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Cronobacter
turicensis z3032]
Length = 214
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P GA P +P F L A +RA A P +PD C+ N
Sbjct: 78 YAQVDPQTGAPWPAMPDAFRTLCDAA---ARA-------------AGYPDFTPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGGPSRLFYHGIQPLKPGQHPTT-------GEYRYNLTFRQ 211
>gi|296103853|ref|YP_003613999.1| DNA-N1-methyladenine dioxygenase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058312|gb|ADF63050.1| DNA-N1-methyladenine dioxygenase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 218
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+EA P PD C+ N Y KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 VEATYPDFQPDACLINRYGVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++G +SR +HG++ + P P++ R NLTFRQ
Sbjct: 161 RNDPLQRLMLEHGDVVVWGRESRLYYHGIQPLKPGVHPQT-------GEFRFNLTFRQ 211
>gi|407784798|ref|ZP_11131947.1| alkylated DNA repair protein [Celeribacter baekdonensis B30]
gi|407204500|gb|EKE74481.1| alkylated DNA repair protein [Celeribacter baekdonensis B30]
Length = 203
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SP+ C+ NFY K+G+HQD+DE +D PVVS S+GD A F G + V
Sbjct: 102 SPECCLVNFYGEGAKMGMHQDRDE----MDFGQPVVSISLGDEALFRVGQATRGGKTESV 157
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+SGDV++ G++R ++HG+++I T +LL + GRLNLT R
Sbjct: 158 WLQSGDVVVMNGEARLLYHGIDRI--KTGTSTLLRDG----GRLNLTLR 200
>gi|418939452|ref|ZP_13492850.1| 2OG-Fe(II) oxygenase [Rhizobium sp. PDO1-076]
gi|375053914|gb|EHS50311.1| 2OG-Fe(II) oxygenase [Rhizobium sp. PDO1-076]
Length = 206
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY K+GLHQD+DE+ D PVVS S+G+S F G L +
Sbjct: 105 PEACLVNFYGDDAKMGLHQDRDET----DFNAPVVSVSLGNSCLFRIGGLERKDRTSSLK 160
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV + GG R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 161 LDSGDVFVLGGAGRLCFHGVDRIYPGTS--TLLKNG----GRINLTLRR 203
>gi|423121343|ref|ZP_17109027.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5246]
gi|376394178|gb|EHT06829.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5246]
Length = 218
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P G P +P F QL +A ++ G D +PD C+ N
Sbjct: 78 YAPDDPLTGQRWPSMPTIFRQLAAEA---------ALACGYPDF-------APDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y KL LHQDKDE D P+VS S+G SA F +G LR ++V+LE GDV++
Sbjct: 122 YQPGAKLSLHQDKDER----DLRAPIVSVSLGLSAVFQFGGLRRSDPLQRVLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+GG+SR +HG++ + P++ R NLTFR
Sbjct: 178 WGGESRLFYHGIQPLKEGDHPQT-------GACRYNLTFR 210
>gi|50119851|ref|YP_049018.1| alkylated DNA repair protein [Pectobacterium atrosepticum SCRI1043]
gi|49610377|emb|CAG73821.1| alkylated DNA repair protein [Pectobacterium atrosepticum SCRI1043]
Length = 218
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y + P G P +P F L +A ++ G D E
Sbjct: 70 LGWVTDEQGYRYTSHDPLSGEAWPAMPEAFSLLAKQAASEA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A+
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFHQPIVSVSLGLSATFLFGGMVRSDKAQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + P+ + +E R NLTFR+
Sbjct: 170 RVPLTHGDVVVWGGESRLYFHGILPLKSGAVPEGMPDEC-----RFNLTFRK 216
>gi|238789143|ref|ZP_04632931.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
frederiksenii ATCC 33641]
gi|238722675|gb|EEQ14327.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
frederiksenii ATCC 33641]
Length = 221
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D + +Y P P IP F L IS R EA
Sbjct: 67 CGSAGWVSDAQGYRYSPIDPLTDKAWPAIPTRFMAL-------------AISAAR---EA 110
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y KL LHQDKDE +D P+VS S+G A F +G L A
Sbjct: 111 GFTHFQPDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAIFQFGGLSREA 166
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++V+L GDV+++GG SR +HGV I P +P++ R+NLTFR
Sbjct: 167 KCQRVLLAEGDVVVWGGPSRLNYHGVLPIKPGFSPRA-------GAYRINLTFR 213
>gi|401675707|ref|ZP_10807696.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. SST3]
gi|400217090|gb|EJO47987.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. SST3]
Length = 218
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+ A+ P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 VAADYPDFRPDACLINRYAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++G +SR +HG++ + P P + R NLTFRQ
Sbjct: 161 RNDPLKRIMLEHGDVVVWGRESRLYYHGIQPLKPGVHPLT-------GEYRFNLTFRQ 211
>gi|421852610|ref|ZP_16285296.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479114|dbj|GAB30499.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 222
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 404 GANLYLKMMCLGKNWDPETSQ---YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + + M C G T+Q Y P G P +P F L KA Q
Sbjct: 62 GGQMSVAMTCCGTFGWISTAQGYSYTKVNPFTGQPWPDMPAIFQALAHKAAQ-------- 113
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+A P+ C+ N YS ++GLHQD+DE D+ PVVS S G A
Sbjct: 114 --------KAGFAQFQPNTCLINSYSPGARMGLHQDRDEG--CTDQ--PVVSLSFGLEAT 161
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG--R 578
FL+G L+ ++++L+ GDVL++GG R FHGV+ I +R G R
Sbjct: 162 FLWGGLKRSDPTRQILLKDGDVLVWGGPDRLRFHGVKPIH---------SGAHIRTGETR 212
Query: 579 LNLTFR 584
LN+TFR
Sbjct: 213 LNITFR 218
>gi|365971401|ref|YP_004952962.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae EcWSU1]
gi|365750314|gb|AEW74541.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae EcWSU1]
Length = 216
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+EA PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 VEAGYADFRPDACLINRYAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++G +SR +HG++ + P P++ RLNLTFRQ
Sbjct: 161 RNDPLKRLMLEHGDVVVWGRESRLFYHGIQPLKPGVHPQT-------GEFRLNLTFRQ 211
>gi|425733963|ref|ZP_18852283.1| DNA-N1-methyladenine dioxygenase [Brevibacterium casei S18]
gi|425482403|gb|EKU49560.1| DNA-N1-methyladenine dioxygenase [Brevibacterium casei S18]
Length = 240
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
SPD+ + N+Y + K+G+HQDKDE + PVVS S+GDS F +G+
Sbjct: 130 AYSPDVALVNYYDESAKMGMHQDKDEHDPA-----PVVSLSLGDSCTFRFGNTETKNRPY 184
Query: 534 KVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ I L SGD +FGG +R +HGV +I P TAP++ + + GR N+T R
Sbjct: 185 EDIRLASGDAFVFGGPARFAYHGVTRIHPGTAPEA-ARLSDLGGGRTNITMR 235
>gi|365880048|ref|ZP_09419434.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 375]
gi|365291930|emb|CCD91965.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 375]
Length = 217
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y P GA P +P F +L KA EA +PD C+ N
Sbjct: 81 RYDAVDPESGARWPAMPPLFRELADKAAT----------------EAGFAGFAPDACLIN 124
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y K+ LHQD+DE D P+VS S+G A FL+G L+ ++ L GDV+
Sbjct: 125 RYEPGAKMSLHQDRDER----DIGAPIVSVSLGLPATFLFGGLKRTDKTQRHRLVHGDVV 180
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++GG +R FHGV AP + E + R R+NLTFR+
Sbjct: 181 VWGGPARLAFHGV-------APLAEGEHALLGRRRINLTFRR 215
>gi|402820034|ref|ZP_10869601.1| alkylated DNA repair protein [alpha proteobacterium IMCC14465]
gi|402510777|gb|EJW21039.1| alkylated DNA repair protein [alpha proteobacterium IMCC14465]
Length = 206
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y + P G V P +P ++ A D L D+ AE
Sbjct: 56 LGWVSDIKGYRYQETHPETGEVWPPLP----DILQTAWADLTGL---------DVPAE-- 100
Query: 474 CMSPDICIANFYSAT-GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
C C+ N Y + K+GLHQD+DE IDK PV+SFS+GDSA F G
Sbjct: 101 C-----CLINLYQGSRAKMGLHQDRDE----IDKNFPVLSFSLGDSARFRVGGKTRKGPT 151
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ V L SGDV++ G+SR FHG+++I P+++ +L+ + GR+NLT R+
Sbjct: 152 QSVKLNSGDVVVLQGESRLGFHGIDRIMPESS--TLIGDYIEGGGRVNLTLRR 202
>gi|258543248|ref|YP_003188681.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01]
gi|384043168|ref|YP_005481912.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-12]
gi|384051685|ref|YP_005478748.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-03]
gi|384054792|ref|YP_005487886.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-07]
gi|384058027|ref|YP_005490694.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-22]
gi|384060668|ref|YP_005499796.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-26]
gi|384063960|ref|YP_005484602.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-32]
gi|384119971|ref|YP_005502595.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634326|dbj|BAI00302.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01]
gi|256637384|dbj|BAI03353.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-03]
gi|256640436|dbj|BAI06398.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-07]
gi|256643493|dbj|BAI09448.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-22]
gi|256646548|dbj|BAI12496.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-26]
gi|256649601|dbj|BAI15542.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-32]
gi|256652589|dbj|BAI18523.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655645|dbj|BAI21572.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-12]
Length = 222
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 404 GANLYLKMMCLGKNWDPETSQ---YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + + M C G T+Q Y P G P +P F L KA Q
Sbjct: 62 GGQMSVAMTCCGTFGWISTAQGYSYTKVNPFTGQPWPDMPAIFQALAHKAAQ-------- 113
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+A P+ C+ N YS ++GLHQD+DE D+ PVVS S G A
Sbjct: 114 --------KAGFAQFQPNACLINSYSPGARMGLHQDRDEG--CTDQ--PVVSLSFGLEAT 161
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG--R 578
FL+G L+ ++++L+ GDVL++GG R FHGV+ I +R G R
Sbjct: 162 FLWGGLKRSDPTRQILLKDGDVLVWGGPDRLRFHGVKPIH---------SGAHIRTGETR 212
Query: 579 LNLTFR 584
LN+TFR
Sbjct: 213 LNITFR 218
>gi|398355714|ref|YP_006401178.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Sinorhizobium
fredii USDA 257]
gi|390131040|gb|AFL54421.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Sinorhizobium
fredii USDA 257]
Length = 203
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYSA ++GLHQD+DE D VVS S+GD+ F G
Sbjct: 102 PEACLVNFYSADARMGLHQDRDER----DLETAVVSISLGDTCLFRVGGRTRGGRTMSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV++ GG+ R FHGV++I+P+T+ +LL+ GR+NLT R+
Sbjct: 158 LESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLKNG----GRVNLTLRR 200
>gi|334124893|ref|ZP_08498888.1| alkylated DNA repair protein [Enterobacter hormaechei ATCC 49162]
gi|333387964|gb|EGK59155.1| alkylated DNA repair protein [Enterobacter hormaechei ATCC 49162]
Length = 213
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+ A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 VAAGYPDFRPDACLINRYAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG+SR +HG++ + P P + R NLTFRQ
Sbjct: 161 RNDPLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGDHPVA-------GAFRYNLTFRQ 211
>gi|357590600|ref|ZP_09129266.1| alkylated DNA repair protein [Corynebacterium nuruki S6-4]
Length = 226
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 365 AKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQ 424
A + ++ W ++ ++ GP +P G + +M+CLG++W P T+
Sbjct: 27 AGAVHVPGWLTEGQQQDLLDRVATWARGPVAPARPRTASG-EMSSRMLCLGRHWVP-TAP 84
Query: 425 YG---TSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICI 481
G R DG P++PV +LV A RA+ GR SPDI +
Sbjct: 85 RGHRYFDRAVDGNGAPVLPVP-PELVTLA---RRAVFAATGDGRAAGR-----YSPDIAV 135
Query: 482 ANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESG 540
N Y +G+H+D DE+ E+ PVVS S+G + F +G+ D + + L G
Sbjct: 136 VNIYGPDAHMGMHRDDDEASEA-----PVVSLSLGAACRFRFGNATDRSRPYTDLTLAPG 190
Query: 541 DVLIFGGKSRRIFHGVEKIF 560
D+ +FGG +R +HGV+KI
Sbjct: 191 DLFVFGGPARWNYHGVQKIL 210
>gi|86355707|ref|YP_467599.1| alkylated DNA repair protein [Rhizobium etli CFN 42]
gi|86279809|gb|ABC88872.1| alkylated DNA repair protein [Rhizobium etli CFN 42]
Length = 203
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYSDDARMGLHQDKDEQ----DLQAPVVSISLGNSCRFRIGGLNRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R +HGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 158 LASGDLVVLGGEGRLCYHGVDRIYPATS--TLLKNG----GRINLTLRR 200
>gi|340793927|ref|YP_004759390.1| hypothetical protein CVAR_0963 [Corynebacterium variabile DSM
44702]
gi|340533837|gb|AEK36317.1| hypothetical protein CVAR_0963 [Corynebacterium variabile DSM
44702]
Length = 223
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 34/230 (14%)
Query: 356 RNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLG 415
R + L GA+ ++ W + ++ IV+ R GP +P Y G + ++M+ LG
Sbjct: 21 REPVDLPSGAR--FLPDWLTMDQQQWIVRQYRQWRNGPVPPRRPRYGSG-QMSVEMLSLG 77
Query: 416 KNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCM 475
+W + G SR V+ + + D + ++ TG P
Sbjct: 78 WHW----AGNGFSRNA---------VDVNNARILPMPDWAVKVGRMVTGD-------PTY 117
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KK 534
+PD +AN Y +G+H+D DES + PVVS SIGD+ F +G+
Sbjct: 118 TPDSLLANHYGPGATMGMHRDADESSPA-----PVVSLSIGDTCRFRFGNAETRTKPYTD 172
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGD +FGG +R FHGV ++ TAP +E + GRLN+T R
Sbjct: 173 VELRSGDAFVFGGPARWNFHGVPRVLDGTAP----DECGI-TGRLNITMR 217
>gi|295098112|emb|CBK87202.1| DNA-N1-methyladenine dioxygenase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 216
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+ A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 VAAGYPDFRPDACLINRYAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG+SR +HG++ + P P + R NLTFRQ
Sbjct: 161 RNDPLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGDHPVA-------GAFRYNLTFRQ 211
>gi|419958235|ref|ZP_14474300.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae GS1]
gi|388606918|gb|EIM36123.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae GS1]
Length = 216
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+ A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 VAAGYPDFRPDACLINRYAVGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG+SR +HG++ + P P + R NLTFRQ
Sbjct: 161 RNDPLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGDHPVA-------GAFRYNLTFRQ 211
>gi|443310909|ref|ZP_21040547.1| alkylated DNA repair protein [Synechocystis sp. PCC 7509]
gi|442779080|gb|ELR89335.1| alkylated DNA repair protein [Synechocystis sp. PCC 7509]
Length = 203
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y KLGLHQD E +K P++S S+GDS F+ G L K+ I
Sbjct: 103 PESCLINLYRKGEKLGLHQDNTEE----NKNAPIISISLGDSGIFILGGLMRTDETKQYI 158
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++SGD+++ GG+SR FH + P+T+ +LL++ GRLNLT RQ
Sbjct: 159 VQSGDIIVLGGESRNFFHAFKGTVPNTS--NLLKDG----GRLNLTIRQ 201
>gi|451942955|ref|YP_007463591.1| DNA repair protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451902342|gb|AGF71229.1| DNA repair protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 230
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 369 YIEAWYGITEEVKIV----KICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQ 424
++ W ++E+ ++V I R + P ++P G + ++ LG+ W T
Sbjct: 24 HLPGWLPVSEQERLVSQARAIARSVAGTPLAMHRPVVGTG-QMSAYILSLGRYW--RTRP 80
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
YG R G P +P E+ +L A+ + + E+++ + + N+
Sbjct: 81 YGYVRSLGGVDVPAVPPEYGRLARAALSAASGVAEELAPWADG------AFRAETALVNY 134
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVL 543
Y + +GLH D +E E+ PVVS SIGD A F G++ V L SGD++
Sbjct: 135 YPSGASMGLHVDANEVSEA-----PVVSLSIGDEAVFRMGNVHGRTRPWSDVTLMSGDLV 189
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+FGG +RR +HGV + TAP + GR+N+T RQ
Sbjct: 190 VFGGPARRAYHGVPVVRDGTAPAG----CGLCEGRINITIRQ 227
>gi|89052704|ref|YP_508155.1| DNA-N1-methyladenine dioxygenase [Jannaschia sp. CCS1]
gi|88862253|gb|ABD53130.1| DNA-N1-methyladenine dioxygenase [Jannaschia sp. CCS1]
Length = 216
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 89/194 (45%), Gaps = 38/194 (19%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIP--VEFHQLVGKA 450
Y+P R G + ++M G W D +Y P PPI P +E + V
Sbjct: 53 LYRPETRTGRKMSVRMTSAGTYGWISDRRGYRYDRCHPDGQDWPPIPPMALEIWRAVSGV 112
Query: 451 IQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPV 510
QD P C+ N+Y A K+G+HQD+DE D +PV
Sbjct: 113 AQD-----------------------PQSCLINYYDAGAKMGMHQDRDEG----DFDMPV 145
Query: 511 VSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE 570
VS S+GD A F G + + V L+SGDV + GG++R FHG+++I ++ +LL
Sbjct: 146 VSVSLGDEALFRVGGPKRGGKTQSVWLKSGDVAVMGGEARLNFHGIDRIRAGSS--TLLP 203
Query: 571 ETSMRRGRLNLTFR 584
GR+NLT R
Sbjct: 204 NG----GRINLTMR 213
>gi|56694970|ref|YP_165315.1| alkylated DNA repair protein [Ruegeria pomeroyi DSS-3]
gi|56676707|gb|AAV93373.1| alkylated DNA repair protein, putative [Ruegeria pomeroyi DSS-3]
Length = 198
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD C+ N+Y ++GLHQD+DE+ D PVVS S+GD A F G+ + V
Sbjct: 97 APDCCLINYYGEGARMGLHQDRDEA----DLTWPVVSLSLGDDALFRIGNTSRGGKTESV 152
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG +R I+HG+++I LL + GRLNLT R
Sbjct: 153 WLNSGDVVVMGGPARLIYHGIDRI--RFGSSRLLPKG----GRLNLTLR 195
>gi|253687194|ref|YP_003016384.1| 2OG-Fe(II) oxygenase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251753772|gb|ACT11848.1| 2OG-Fe(II) oxygenase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 218
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G P +P F +L +A +++ G D E
Sbjct: 70 LGWVTDERGYRYTSHDPLSGEAWPDMPEVFSRLAQQAAREA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + +
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFRQPIVSVSLGLSATFLFGGMARSDKVQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + P+ + +E R NLTFR+
Sbjct: 170 RVALTHGDVVVWGGESRLYFHGILPLKSGGVPEGMSDEC-----RFNLTFRK 216
>gi|357410569|ref|YP_004922305.1| 2OG-Fe(II) oxygenase [Streptomyces flavogriseus ATCC 33331]
gi|320007938|gb|ADW02788.1| 2OG-Fe(II) oxygenase [Streptomyces flavogriseus ATCC 33331]
Length = 222
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 363 IGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPET 422
I + ++ W + +V CR GP G + ++ +C+G +W P
Sbjct: 12 IAPGAWHVPDWLTPAQRRALVTACRAWATGPVPIRHTRLPRGGVMSVRTVCVGWHWQP-- 69
Query: 423 SQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIA 482
Y +R D V + EF + + RA++ EA +PD +
Sbjct: 70 --YRYTRTADD-VNGLRVAEFPDWMVRL--GRRAVLAAYGD-----EARAQEYTPDTALI 119
Query: 483 NFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGD 541
NFY ++G+HQDKDE + PVVS SIGD+ F G+ V L SGD
Sbjct: 120 NFYDGQARMGMHQDKDERSPA-----PVVSLSIGDTCVFRVGNTETRTRPYTDVELCSGD 174
Query: 542 VLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ + GG SR +HGV K+ T +T + GRLN+T R
Sbjct: 175 LFVLGGPSRFAYHGVPKVREGTGDP----DTGLASGRLNITMR 213
>gi|170740259|ref|YP_001768914.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. 4-46]
gi|168194533|gb|ACA16480.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. 4-46]
Length = 228
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y+ ++GLHQD+DE +++D PV+S S+G +A F +G R + +
Sbjct: 114 PEACLVNLYAPGARMGLHQDRDE--DALDA--PVLSLSLGATALFRHGGPRRGDPTRSLR 169
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRR-----GRLNLTFRQ 585
L SGD L+ GG SR IFHGV++I P+ P LL + GR+NLT R+
Sbjct: 170 LRSGDALVIGGASRLIFHGVDRIVPE--PPDLLGAPPLPEPVPPGGRVNLTLRR 221
>gi|110635828|ref|YP_676036.1| 2OG-Fe(II) oxygenase [Chelativorans sp. BNC1]
gi|110286812|gb|ABG64871.1| 2OG-Fe(II) oxygenase [Chelativorans sp. BNC1]
Length = 204
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SP+ C+ NFYS K+GLHQD+DE + PVVS S+GD F G +
Sbjct: 101 SPEACLINFYSQDAKMGLHQDRDEKNFAA----PVVSVSLGDDCLFRVGGNDRESGTASF 156
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG+ R FHGV++I+P T+ LL+ GR+NLT R+
Sbjct: 157 RLSSGDVVVLGGEGRLAFHGVDRIYPHTS--DLLKNG----GRINLTLRR 200
>gi|156933166|ref|YP_001437082.1| hypothetical protein ESA_00977 [Cronobacter sakazakii ATCC BAA-894]
gi|156531420|gb|ABU76246.1| hypothetical protein ESA_00977 [Cronobacter sakazakii ATCC BAA-894]
Length = 214
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P GA P +P F L A + G D +PD C+ N
Sbjct: 78 YAQVDPQTGAPWPAMPDAFRTLCDAAAS---------AAGYLDF-------TPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 211
>gi|293446562|ref|ZP_06662984.1| alkylated DNA repair protein [Escherichia coli B088]
gi|291323392|gb|EFE62820.1| alkylated DNA repair protein [Escherichia coli B088]
Length = 216
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+A KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAAGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|183599172|ref|ZP_02960665.1| hypothetical protein PROSTU_02628 [Providencia stuartii ATCC 25827]
gi|386745490|ref|YP_006218669.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
stuartii MRSN 2154]
gi|188021399|gb|EDU59439.1| putative alkylated DNA repair protein AlkB [Providencia stuartii
ATCC 25827]
gi|384482183|gb|AFH95978.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
stuartii MRSN 2154]
Length = 210
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 12/126 (9%)
Query: 461 ISTGRKDIE-AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSA 519
I RK E A SPD C+ N YS KL LHQDKDE +D P+VSFS+G A
Sbjct: 94 IELARKAAEMAGFYHFSPDACLINRYSVGAKLSLHQDKDE----MDFSQPIVSFSLGLPA 149
Query: 520 EFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRL 579
F +G L A ++LE GDV+++GGKSR +HGV I P +L E R+
Sbjct: 150 TFDFGGLTREAPKTALLLEHGDVVVWGGKSRLNYHGVRSIKAGCHP--VLGEF-----RI 202
Query: 580 NLTFRQ 585
N+TFR+
Sbjct: 203 NITFRR 208
>gi|417791742|ref|ZP_12439172.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii E899]
gi|333954173|gb|EGL72045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii E899]
Length = 214
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P GA P +P F L A + G D +PD C+ N
Sbjct: 78 YAQVDPQTGAPWPAMPDAFRTLCDAAAS---------AAGYLDF-------TPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 211
>gi|419803835|ref|ZP_14329002.1| alkylated DNA repair protein AlkB [Escherichia coli AI27]
gi|384473234|gb|EIE57278.1| alkylated DNA repair protein AlkB [Escherichia coli AI27]
Length = 215
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+A KL LHQD
Sbjct: 89 PAMPQSFHDLCQRAT----------------TAAGYPDFQPDACLINRYAAGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 189 QPLKAGFHPLT-------TDCRYNLTFRQ 210
>gi|221069587|ref|ZP_03545692.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni KF-1]
gi|220714610|gb|EED69978.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni KF-1]
Length = 224
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y ++GLH+D+DE D P+VS S+G + FL+G L +
Sbjct: 111 PGFAPDACLINCYQPGARMGLHRDQDEH----DFAAPIVSVSLGLACSFLWGGLTRQSPT 166
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ L GDVL++GG SR +FHGV + P P LL R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGPSRLVFHGVAPLKPGQHP--LLGNE-----RWNLTFR 211
>gi|430005787|emb|CCF21590.1| Alpha-ketoglutarate-dependent dioxygenase alkB homolog [Rhizobium
sp.]
Length = 203
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY ++GLHQDKDE+ D PV+S S+G++ F G
Sbjct: 102 PEACLVNFYDDQARMGLHQDKDET----DLSAPVLSISLGNTCLFRIGGTERKEPTHSFR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDVL+ GG R FHGV++++P+T+ +LL GR+NLT R+
Sbjct: 158 LTSGDVLVLGGAGRLCFHGVDRVYPETS--TLLRNG----GRINLTLRR 200
>gi|339505659|ref|YP_004693079.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Roseobacter
litoralis Och 149]
gi|338759652|gb|AEI96116.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Roseobacter litoralis Och 149]
Length = 226
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 86/184 (46%), Gaps = 34/184 (18%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + ++M G W D + +Y T+ P DG P IP Q+ +
Sbjct: 71 GKQMSVRMTAAGNYGWITDRQGYRYATTHP-DGQEWPAIPASVLQV-----------WKD 118
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+S+ +D P+ C+ NFY ++GLHQDKDE PVVS S+GD
Sbjct: 119 LSSSARD---------PECCLVNFYGEGARMGLHQDKDEGSFE----FPVVSISLGDEGL 165
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F G + V L+SGDV++ GG +R HGV++I SLLE+ GRLN
Sbjct: 166 FRMGHAERGGKTQSVWLQSGDVVVMGGVARLAHHGVDRI--RFGSSSLLEKG----GRLN 219
Query: 581 LTFR 584
LT R
Sbjct: 220 LTLR 223
>gi|149202961|ref|ZP_01879932.1| alkylated DNA repair protein, putative [Roseovarius sp. TM1035]
gi|149143507|gb|EDM31543.1| alkylated DNA repair protein, putative [Roseovarius sp. TM1035]
Length = 202
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 371 EAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGT 427
+ W E+ ++ RD+ + +QP G + ++M G+ W D +Y
Sbjct: 15 KGWLDPLEQEALIASLRDV-VAQAPLFQPVTPSGRAMSVRMTSAGRCGWISDRNGYRYAG 73
Query: 428 SRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSA 487
P DG P IP + + ++R PD C+ N Y+
Sbjct: 74 HHP-DGMGWPPIPETVLAIWRALVSETRL--------------------PDCCLINHYTG 112
Query: 488 TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGG 547
++GLHQD+DE+ D PV+S S+GD A F G++ + L SGDV++ GG
Sbjct: 113 QARMGLHQDRDEA----DFTWPVLSISLGDDALFRIGNVTRGGKTDSLWLASGDVVVMGG 168
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+R ++HG+++I P T+ LL GR+NLT R
Sbjct: 169 AARLVYHGIDRIRPGTS--GLLRGG----GRINLTCR 199
>gi|377576511|ref|ZP_09805495.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia
hermannii NBRC 105704]
gi|377542543|dbj|GAB50660.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia
hermannii NBRC 105704]
Length = 216
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
A P +PD C+ N Y KL LHQDKDE + P+VS S+G A F +G L
Sbjct: 107 AGYPDFAPDACLINRYEPGAKLSLHQDKDEP----NLAAPIVSVSLGLPAVFQFGGLTRS 162
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
A ++V+LE GDV+++GG SR ++HG++ + P P + R NLTFR
Sbjct: 163 APLQRVMLEHGDVVVWGGPSRLVYHGIQPLKPGDHPLT-------GSYRYNLTFR 210
>gi|241206982|ref|YP_002978078.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860872|gb|ACS58539.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+TGR + P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F
Sbjct: 76 ATGRPWPDMPQQFRPPEACLVNFYSDEARMGLHQDKDEQ----DFKAPVVSISLGNSCLF 131
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNL 581
G L L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NL
Sbjct: 132 RVGGLSHNDRTLSFKLSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINL 185
Query: 582 TFRQ 585
T R+
Sbjct: 186 TLRR 189
>gi|424897651|ref|ZP_18321225.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393181878|gb|EJC81917.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 205
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLINFYSDDARMGLHQDKDER----DFQAPVVSISLGNSCLFRIGGLSRKDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDVVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|421589908|ref|ZP_16034985.1| 2OG-Fe(II) oxygenase [Rhizobium sp. Pop5]
gi|403705042|gb|EJZ20746.1| 2OG-Fe(II) oxygenase [Rhizobium sp. Pop5]
Length = 203
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYSDDARMGLHQDKDEQ----DLQAPVVSISLGNSCLFRVGGLNRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|300926323|ref|ZP_07142123.1| alkylated DNA repair protein AlkB [Escherichia coli MS 182-1]
gi|301328707|ref|ZP_07221760.1| alkylated DNA repair protein AlkB [Escherichia coli MS 78-1]
gi|417237889|ref|ZP_12035620.1| alkylated DNA repair protein AlkB [Escherichia coli 9.0111]
gi|417597534|ref|ZP_12248175.1| alkylated DNA repair protein AlkB [Escherichia coli 3030-1]
gi|422956415|ref|ZP_16968889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H494]
gi|432832242|ref|ZP_20065816.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE135]
gi|450218562|ref|ZP_21895936.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O08]
gi|300417600|gb|EFK00911.1| alkylated DNA repair protein AlkB [Escherichia coli MS 182-1]
gi|300844855|gb|EFK72615.1| alkylated DNA repair protein AlkB [Escherichia coli MS 78-1]
gi|345353522|gb|EGW85754.1| alkylated DNA repair protein AlkB [Escherichia coli 3030-1]
gi|371599950|gb|EHN88728.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H494]
gi|386213667|gb|EII24092.1| alkylated DNA repair protein AlkB [Escherichia coli 9.0111]
gi|431376212|gb|ELG61535.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE135]
gi|449317622|gb|EMD07707.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O08]
Length = 216
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+A KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAT----------------TAAGYPDFQPDACLINRYAAGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|118590470|ref|ZP_01547872.1| alkylated DNA repair protein [Stappia aggregata IAM 12614]
gi|118436933|gb|EAV43572.1| alkylated DNA repair protein [Stappia aggregata IAM 12614]
Length = 207
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY ++GLHQD+DE PVVS S+GD+A F G L K
Sbjct: 105 PEACLINFYDQGARMGLHQDRDEQMFEA----PVVSVSLGDTATFRVGGLSRKDPTKSFR 160
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG++R FHG++++ T+ +LL+ GR+NLT R+
Sbjct: 161 LQSGDVVVLGGEARLAFHGIDRVLAGTS--TLLKNG----GRINLTLRR 203
>gi|440795550|gb|ELR16670.1| hypothetical protein ACA1_089180 [Acanthamoeba castellanii str.
Neff]
Length = 212
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 10/120 (8%)
Query: 470 AELPCM-SPDICIANFYSATGKLGLHQDK-----DESQESIDKCLPVVSFSIGDSAEFLY 523
A +PC+ P+ C N+Y+ +GK+G H D+ E Q ++ PV+S S G+SAEF Y
Sbjct: 94 ASVPCLDEPNTCRINYYTNSGKIGWHYDRVPSLSKEEQRTVTD--PVISMSFGNSAEFQY 151
Query: 524 GDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTF 583
D + VILESGDV+IFGG +R I+H V ++ +T PK L+ GR N+ +
Sbjct: 152 KQRMD-DPEESVILESGDVIIFGGPARMIYHMVPRVIKNTTPKG-LDLRQFGPGRFNVGY 209
>gi|116249805|ref|YP_765643.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115254453|emb|CAK05527.1| putative alkylated DNA repair protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 203
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDEQ----DLKAPVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|85705710|ref|ZP_01036807.1| alkylated DNA repair protein, putative [Roseovarius sp. 217]
gi|85669700|gb|EAQ24564.1| alkylated DNA repair protein, putative [Roseovarius sp. 217]
Length = 202
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ NFY+ ++G+HQD+DE+ D PV+S S+GD A F G L + +
Sbjct: 102 PDCCLINFYAPGARMGMHQDRDEA----DFNWPVLSVSLGDDALFRIGTLARGGKTESLW 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG +R +HGV++I P ++ SLL GR+NLT R
Sbjct: 158 LNSGDVVVMGGAARLAYHGVDRIRPGSS--SLLRGG----GRINLTCR 199
>gi|254502799|ref|ZP_05114950.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Labrenzia alexandrii
DFL-11]
gi|222438870|gb|EEE45549.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Labrenzia alexandrii
DFL-11]
Length = 207
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y + P G + P IP +L K + + P
Sbjct: 62 LGWVSDINSYRYQPNHPETGLMWPAIPARLLEL------------------WKAVAPDAP 103
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
P+ C+ NFY T ++GLHQD+DE+ PVVS S+GD+A F G K
Sbjct: 104 --EPEACLINFYEPTARMGLHQDRDEAMFEA----PVVSVSLGDTATFRVGGTNRKDPTK 157
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV++ GG +R +HG+++I T+ LL+ GR+NLT R+
Sbjct: 158 SFRLSSGDVVVLGGDARLAYHGIDRILSGTS--KLLKNG----GRINLTLRR 203
>gi|390450506|ref|ZP_10236097.1| 2OG-Fe(II) oxygenase [Nitratireductor aquibiodomus RA22]
gi|389662409|gb|EIM73975.1| 2OG-Fe(II) oxygenase [Nitratireductor aquibiodomus RA22]
Length = 204
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y+ K+GLHQD+DE PVVS S+GD+ F G + V
Sbjct: 102 PEACLVNHYTEAAKMGLHQDRDEEA----FLAPVVSVSLGDTCLFRVGGTKRGDRTVSVK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV++ GG R FHGV++I+P T+ +LL GR+NLT R+
Sbjct: 158 LQSGDVVVLGGAGRLAFHGVDRIYPGTS--TLLSAP----GRINLTLRR 200
>gi|429121188|ref|ZP_19181831.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 680]
gi|426324344|emb|CCK12568.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 680]
Length = 214
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P GA P +P F L A A +PD C+ N
Sbjct: 78 YAQVDPQTGAPWPAMPDAFRTLCDAAAS----------------AAGYTSFTPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 211
>gi|325003075|ref|ZP_08124187.1| alkylated DNA repair protein [Pseudonocardia sp. P1]
Length = 242
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 347 SLLVTNRQKRNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGAN 406
+L + R +R+ L+ GA ++ W + + +V+ CR+ G GA
Sbjct: 2 TLELIPRDRRD---LAPGAV--HVPGWLDLRRQRFLVERCREWAAQGPGIRAAALPGGAR 56
Query: 407 LYLKMMCLGKNWDPETSQYGTSRP-TDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGR 465
+ ++ +CLG +W P +Y +R DG+ P+ L +A+ D+
Sbjct: 57 MSVRTVCLGWHWIP--YRYSRTRDDQDGSPVAEFPIWLGDLGREAVADAYG--------- 105
Query: 466 KDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD 525
D L SPDI + N Y+ +LG+H+D DE PVVS S+G F G+
Sbjct: 106 -DPTRGL-GYSPDIALINHYTGDARLGMHRDGDEHAPD-----PVVSVSLGAPCVFRLGN 158
Query: 526 LRDVAN-AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGD+L+FG SR +HGV ++ P + E+ + GRLN+T R
Sbjct: 159 TEHRGRPWTDVELRSGDLLVFGDDSRLAYHGVPRVLPPEPGGT--EDIGLSAGRLNITLR 216
>gi|398833297|ref|ZP_10591433.1| alkylated DNA repair protein [Herbaspirillum sp. YR522]
gi|398221808|gb|EJN08205.1| alkylated DNA repair protein [Herbaspirillum sp. YR522]
Length = 217
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
A P PD C+ N Y A ++ LHQDKDE D P+VS S+G A FL+G +
Sbjct: 111 AGFPGFVPDACLINRYQAGARMSLHQDKDEH----DMTQPIVSVSLGLPATFLFGGAQRS 166
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A+++ LESGDV+++GG +R +FHGV AP + E R NLT R+
Sbjct: 167 DRAQRLRLESGDVVVWGGPARLLFHGV-------APLAAGEHALTGPYRYNLTLRR 215
>gi|424873011|ref|ZP_18296673.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168712|gb|EJC68759.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 203
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDEQ----DLKAPVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|255080234|ref|XP_002503697.1| predicted protein [Micromonas sp. RCC299]
gi|226518964|gb|ACO64955.1| predicted protein [Micromonas sp. RCC299]
Length = 334
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 438 IIPV-EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
I+PV +F + +G+ + R + T D +P M+P + NFY K H+D
Sbjct: 165 ILPVSDFPERLGRIV---RGCVRCAQTA--DSCTNVPDMNPTTALVNFYKEGAKFKWHRD 219
Query: 497 -KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHG 555
+D + D P+VSF++G SA+F Y + + A + V L SGDVL+FGG SR I H
Sbjct: 220 SEDPAHARHDTGPPIVSFTVGLSADFSYKNRFEDATHRTVRLNSGDVLLFGGPSRMIVHS 279
Query: 556 VEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V + P T P L M GRLN+T R
Sbjct: 280 VTGVVPRTMPPML--RGRMLHGRLNVTVR 306
>gi|421850798|ref|ZP_16283743.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus NBRC
101655]
gi|371458359|dbj|GAB28946.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus NBRC
101655]
Length = 222
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 84/186 (45%), Gaps = 34/186 (18%)
Query: 404 GANLYLKMMCLGKNWDPETSQ---YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + + M C G T+Q Y P P +P F L KA Q
Sbjct: 62 GGQMSVAMTCCGTFGWISTAQGYSYTKVNPFTSQPWPDMPAIFQALAHKAAQ-------- 113
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+A P+ C+ N YS ++GLHQD+DE D+ PVVS S G A
Sbjct: 114 --------KAGFAQFQPNACLINSYSPGARMGLHQDRDEG--CTDQ--PVVSLSFGLEAT 161
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG--R 578
FL+G L+ ++++L+ GDVL++GG R FHGV+ I +R G R
Sbjct: 162 FLWGGLKRSHPTRQILLKDGDVLVWGGPDRLRFHGVKPIH---------SGAHIRTGETR 212
Query: 579 LNLTFR 584
LN+TFR
Sbjct: 213 LNITFR 218
>gi|429094928|ref|ZP_19157437.1| Alkylated DNA repair protein AlkB [Cronobacter dublinensis 1210]
gi|426739955|emb|CCJ83550.1| Alkylated DNA repair protein AlkB [Cronobacter dublinensis 1210]
Length = 214
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P GA P +P F L A +RA A P PD C+ N
Sbjct: 78 YAPVDPQTGAPGPPMPDAFRALCDGA---ARA-------------AGYPDFIPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG++ + P P + R NLTFRQ
Sbjct: 178 WGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 211
>gi|365096983|ref|ZP_09331331.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
NO-1]
gi|363413604|gb|EHL20798.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
NO-1]
Length = 217
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 30/185 (16%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + + M GK W D +Y P G P +P F QL +E
Sbjct: 58 GLRMSVAMTNCGKLGWVSDRNGYRYDPLDPDGGKPWPAMPPLFRQLA----------LEA 107
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+T A P +PD C+ N Y+ +L LHQD+DE + P+VS S+G A
Sbjct: 108 AAT------AGFPGFAPDACLINRYAPGTRLSLHQDRDEG----NYAHPIVSVSLGIPAV 157
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
FL+G + NA+++ L GDV+++GG +R FHGV + T P + R+N
Sbjct: 158 FLWGGAQRAGNARRIALMHGDVVVWGGPARLRFHGVLPLPEGTHPLTGAH-------RIN 210
Query: 581 LTFRQ 585
LTFR+
Sbjct: 211 LTFRK 215
>gi|424889292|ref|ZP_18312895.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393174841|gb|EJC74885.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 205
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L +
Sbjct: 102 PEACLINFYSDDARMGLHQDKDER----DLQAPVVSISLGNSCLFRIGGLNRNDPTLSLK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|153010895|ref|YP_001372109.1| 2OG-Fe(II) oxygenase [Ochrobactrum anthropi ATCC 49188]
gi|151562783|gb|ABS16280.1| 2OG-Fe(II) oxygenase [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 74/162 (45%), Gaps = 27/162 (16%)
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y T P G + P +P F L A + EA P +PD C+ N
Sbjct: 76 RYSTDDPETGLLWPTMPDAFRALAQTAAR----------------EAGYPDFAPDACLIN 119
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y KL LHQDKDE D P+VS S+G A F +G L+ K IL GDV+
Sbjct: 120 RYEPGAKLSLHQDKDEQ----DFNNPIVSVSLGLPATFQFGGLKRTDPIAKYILHHGDVV 175
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++GG SR +HG+ + E + RLNLTFR+
Sbjct: 176 VWGGPSRLFYHGILAL-------KRGEHEKLGPFRLNLTFRK 210
>gi|399041275|ref|ZP_10736382.1| alkylated DNA repair protein [Rhizobium sp. CF122]
gi|398060385|gb|EJL52210.1| alkylated DNA repair protein [Rhizobium sp. CF122]
Length = 203
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILES 539
C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L L S
Sbjct: 105 CLINFYSDEARMGLHQDKDEQ----DLAAPVVSISLGNSCLFRVGGLARNDRTLSFKLSS 160
Query: 540 GDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GDV++ G + R FHGV+K++P T+ +LL+ GR+NLT R+
Sbjct: 161 GDVVVLGAEGRLCFHGVDKVYPSTS--TLLKNG----GRINLTLRR 200
>gi|432671285|ref|ZP_19906814.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE119]
gi|431210204|gb|ELF08266.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE119]
Length = 216
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P P +P FH L +A A P PD C+ N
Sbjct: 78 YSPINPQTNKPWPAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV++
Sbjct: 122 YAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG+SR +HG++ + P ++ R NLTFRQ
Sbjct: 178 WGGESRLFYHGIQPLKAGFHPLTI-------DCRYNLTFRQ 211
>gi|194434194|ref|ZP_03066461.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1012]
gi|417671500|ref|ZP_12320989.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 155-74]
gi|194417523|gb|EDX33625.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1012]
gi|332096126|gb|EGJ01129.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 155-74]
Length = 216
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE +D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDE----LDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|379318363|pdb|3T3Y|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Iii) And
2-(3- Hydroxypicolinomido)acetic Acid
gi|379318364|pdb|3T4H|B Chain B, Crystal Structure Of Alkb In Complex With Fe(Iii) And
N-Oxalyl-S-(3- Nitrobenzyl)-L-Cysteine
gi|379318365|pdb|3T4V|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Iii) And
N-Oxalyl-S-(2- Napthalenemethyl)-L-Cysteine
Length = 206
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 80 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 123
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 124 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 179
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 180 QPLKAGFHPLTI-------DCRYNLTFRQ 201
>gi|306834882|ref|ZP_07467940.1| probable alkylated DNA repair protein [Corynebacterium accolens
ATCC 49726]
gi|304569234|gb|EFM44741.1| probable alkylated DNA repair protein [Corynebacterium accolens
ATCC 49726]
Length = 229
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 369 YIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQ 424
++ W GI ++ +V+ I R P QP + G + + + LG+ W + +
Sbjct: 19 HVPGWVGIGKQKALVEETREIARAYAHTPMAMVQPRLKSGGQMSVFQLHLGRYWHYPSYR 78
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y + +G P +P +L A++ + + ++E + P++ + N+
Sbjct: 79 YVDN--MEGTRVPPVPDSLRELAPVALRQAAQVA-------PELEPWVDNFVPEMALVNY 129
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVL 543
Y +G+H D E + PV+S SIGD A F G + V L SGD++
Sbjct: 130 YPPGSAMGMHVDDSEESPA-----PVISLSIGDEALFRIGHTENRTKPWDDVTLCSGDLV 184
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+FGG R +HGV ++ T P E ++ GR+N+T RQ
Sbjct: 185 VFGGPKRFAYHGVVRVNDGTLP----EGCGLQEGRINITIRQ 222
>gi|402770874|ref|YP_006590411.1| 2OG-Fe(II) oxygenase [Methylocystis sp. SC2]
gi|401772894|emb|CCJ05760.1| 2OG-Fe(II) oxygenase [Methylocystis sp. SC2]
Length = 207
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y AT ++GLHQDKDES D P++S S G F G R +A +
Sbjct: 102 PEACLVNVYDATARMGLHQDKDES----DFAAPILSLSFGADCRFRLGGTRRSDSAMALA 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG-RLNLTFRQ 585
L SGD L+ G +R +HGV++I P P LL + G R+NLT R+
Sbjct: 158 LSSGDALVLSGPARMRYHGVDRILPTLNP--LLPDALAAFGVRVNLTLRR 205
>gi|389840228|ref|YP_006342312.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii ES15]
gi|387850704|gb|AFJ98801.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii ES15]
Length = 214
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+
Sbjct: 112 FTPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++LE GDV+++GG SR +HG++ + P P + R NLTFRQ
Sbjct: 168 LLLEHGDVVVWGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 211
>gi|283807196|pdb|3KHB|A Chain A, Crystal Structure Of Escherichia Coli Alkb With Co(Ii) And
2-Og
gi|283807197|pdb|3KHB|B Chain B, Crystal Structure Of Escherichia Coli Alkb With Co(Ii) And
2-Og
Length = 219
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 93 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 136
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 137 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 192
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 193 QPLKAGFHPLTI-------DCRYNLTFRQ 214
>gi|418957421|ref|ZP_13509345.1| alkylated DNA repair protein AlkB [Escherichia coli J53]
gi|384380068|gb|EIE37935.1| alkylated DNA repair protein AlkB [Escherichia coli J53]
Length = 215
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 89 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 189 QPLKAGFHPLTI-------DCRYNLTFRQ 210
>gi|146312434|ref|YP_001177508.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. 638]
gi|145319310|gb|ABP61457.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. 638]
Length = 216
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C G W + Y + P P IP F+ L +A + A
Sbjct: 64 CGGLGWTTNDRGYLYSSVDPVTQCPWPPIPAVFNALCHEA----------------AVAA 107
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y+ KL LHQDKDE P+VS S+G A F +G L+
Sbjct: 108 GYPEFQPDACLINRYAPGAKLSLHQDKDEPNLRA----PIVSVSLGLPAIFQFGGLQRND 163
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG+SR +HG++ + P P + R NLTFRQ
Sbjct: 164 PLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGQHPLT-------GEYRYNLTFRQ 211
>gi|227506087|ref|ZP_03936136.1| alkylated DNA repair protein [Corynebacterium striatum ATCC 6940]
gi|227197369|gb|EEI77417.1| alkylated DNA repair protein [Corynebacterium striatum ATCC 6940]
Length = 227
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 26/223 (11%)
Query: 369 YIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQ 424
++ W + ++ +V+ + R P YQP + G + + + LG+ W ET +
Sbjct: 18 HVPGWVDVAKQRALVEETREVARRYAGTPMAMYQPQLKSG-KMSVHQLHLGRYWHYETYR 76
Query: 425 Y-GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
Y G T VPP++ V ++ A++ + + ++E + P++ + N
Sbjct: 77 YVGNIEGTR--VPPML-VSLQEIARPALRAAAEV-------SPELEPWVETFYPEMALVN 126
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDV 542
+Y +G+H D E + PV+S SIGD A F G+ + V L SGD+
Sbjct: 127 YYPPGSGMGMHVDDFE-----ESLAPVISLSIGDEALFRMGNTENRNKPWDDVTLSSGDL 181
Query: 543 LIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++FGG R +HGV ++ T P E ++ GR+N+T RQ
Sbjct: 182 IVFGGPKRLAYHGVVRVNDATLP----EGCGLKEGRINITIRQ 220
>gi|157161694|ref|YP_001459012.1| alkylated DNA repair protein AlkB [Escherichia coli HS]
gi|312973535|ref|ZP_07787707.1| alkylated DNA repair protein AlkB [Escherichia coli 1827-70]
gi|432370452|ref|ZP_19613538.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE10]
gi|432486019|ref|ZP_19727934.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE212]
gi|433174134|ref|ZP_20358659.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE232]
gi|157067374|gb|ABV06629.1| alkylated DNA repair protein AlkB [Escherichia coli HS]
gi|310332130|gb|EFP99365.1| alkylated DNA repair protein AlkB [Escherichia coli 1827-70]
gi|430884664|gb|ELC07599.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE10]
gi|431015228|gb|ELD28783.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE212]
gi|431691878|gb|ELJ57323.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE232]
Length = 216
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 190 QPLKAGFHPLTI-------DCRYNLTFRQ 211
>gi|373248709|emb|CCD31822.1| alkylated DNA repair protein [Streptomyces albus subsp. albus]
Length = 223
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W G + +++ CR P G G + + +CLG++W P GT+
Sbjct: 22 HVPDWLGTGRQHELLDACRGWARPPAGLRTVHVPGGGTMSARQVCLGRHWVPYRYT-GTA 80
Query: 429 RPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSAT 488
DGA P+ P D A + + E + D+ + NFY+
Sbjct: 81 VDGDGA--PVKPF-------PGWLDELAQSALAAAYGEAAEPD----PYDVALVNFYAEG 127
Query: 489 GKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGG 547
++G+H+D +E + PVVS S+GDS F +G+ + + V L SGD+ +FGG
Sbjct: 128 TRMGMHRDAEEESGA-----PVVSLSLGDSCVFRFGNPENRGRPYQDVELRSGDLFVFGG 182
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+R +HGV ++ + P L GRLN+T R
Sbjct: 183 PARLAYHGVPRVKAHSGPPGL-----GLTGRLNITLR 214
>gi|149912943|ref|ZP_01901477.1| alkylated DNA repair protein, putative [Roseobacter sp. AzwK-3b]
gi|149813349|gb|EDM73175.1| alkylated DNA repair protein, putative [Roseobacter sp. AzwK-3b]
Length = 202
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 12/126 (9%)
Query: 459 EKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDS 518
E++ +D+ ++L +PD C+ N Y K+G+HQD+DE+ D PV+S S+GD
Sbjct: 86 EEVLAIWRDLVSDL--RAPDCCLVNVYREGAKMGMHQDRDEA----DFGWPVLSVSLGDD 139
Query: 519 AEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGR 578
A F G + + L SGDV++ GG +R I+HG+++I P ++ +LL GR
Sbjct: 140 ALFRVGGTTRGGKTESIWLGSGDVVVMGGDARLIYHGIDRIRPGSS--TLLTGG----GR 193
Query: 579 LNLTFR 584
+NLT R
Sbjct: 194 INLTLR 199
>gi|90109327|pdb|2FD8|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
gi|90109337|pdb|2FDF|A Chain A, Crystal Structure Of Alkb In Complex With Co(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
gi|90109339|pdb|2FDG|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
Succinate, And Methylated Trinucleotide T-Mea-T
gi|90109341|pdb|2FDH|A Chain A, Crystal Structure Of Alkb In Complex With Mn(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
gi|90109343|pdb|2FDI|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
(Air 3 Hours)
gi|90109345|pdb|2FDJ|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii) And
Succinate
gi|90109346|pdb|2FDK|A Chain A, Crystal Structure Of Alkb In Complex With Fe(ii),
2-oxoglutarate, And Methylated Trinucleotide T-mea-t
(air 9 Days)
gi|256599859|pdb|3I2O|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate And Methylated Trinucleotide T-Mea-T
gi|256599863|pdb|3I3M|A Chain A, Crystal Structure Of Alkb In Complex With Mn(Ii),
2-Oxoglutarate And Methylated Trinucleotide T-Mec-T
gi|256599865|pdb|3I3Q|A Chain A, Crystal Structure Of Alkb In Complex With Mn(Ii) And
2-Oxoglutarate
gi|256599866|pdb|3I3Q|B Chain B, Crystal Structure Of Alkb In Complex With Mn(Ii) And
2-Oxoglutarate
gi|256599867|pdb|3I49|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate And Methylated Trinucleotide T-Mec-T
Length = 211
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 80 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 123
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 124 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 179
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 180 QPLKAGFHPLTI-------DCRYNLTFRQ 201
>gi|418528092|ref|ZP_13094042.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Comamonas
testosteroni ATCC 11996]
gi|371454468|gb|EHN67470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Comamonas
testosteroni ATCC 11996]
Length = 224
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y ++GLH+D+DE D P+VS S+G + FL+G L +
Sbjct: 111 PDFAPDACLINRYQPGARMGLHRDQDEH----DYAAPIVSVSLGLACSFLWGGLTRQSPT 166
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ L GDVL++GG+SR +FHGV AP + + R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGRSRLVFHGV-------APLKQGQHPLLGNERWNLTFR 211
>gi|209551543|ref|YP_002283460.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537299|gb|ACI57234.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 205
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLINFYSDDARMGLHQDKDER----DLQAPVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|424916186|ref|ZP_18339550.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392852362|gb|EJB04883.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 205
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLINFYSDDARMGLHQDKDER----DLQAPVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|449307516|ref|YP_007439872.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii SP291]
gi|449097549|gb|AGE85583.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii SP291]
Length = 214
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+
Sbjct: 112 FTPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++LE GDV+++GG SR +HG++ + P P + R NLTFRQ
Sbjct: 168 LLLEHGDVVVWGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 211
>gi|16130149|ref|NP_416716.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. MG1655]
gi|170081832|ref|YP_001731152.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. DH10B]
gi|238901387|ref|YP_002927183.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BW2952]
gi|300948905|ref|ZP_07162967.1| alkylated DNA repair protein AlkB [Escherichia coli MS 116-1]
gi|300958897|ref|ZP_07171001.1| alkylated DNA repair protein AlkB [Escherichia coli MS 175-1]
gi|301024247|ref|ZP_07187942.1| alkylated DNA repair protein AlkB [Escherichia coli MS 196-1]
gi|301647698|ref|ZP_07247492.1| alkylated DNA repair protein AlkB [Escherichia coli MS 146-1]
gi|331642842|ref|ZP_08343977.1| alkylated DNA repair protein AlkB [Escherichia coli H736]
gi|386281282|ref|ZP_10058944.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
4_1_40B]
gi|386595005|ref|YP_006091405.1| alkylated DNA repair protein AlkB [Escherichia coli DH1]
gi|387612788|ref|YP_006115904.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli ETEC H10407]
gi|387621922|ref|YP_006129549.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
DH1]
gi|388478260|ref|YP_490450.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. W3110]
gi|404375563|ref|ZP_10980747.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
1_1_43]
gi|415778270|ref|ZP_11489316.1| alkylated DNA repair protein AlkB [Escherichia coli 3431]
gi|417259787|ref|ZP_12047310.1| alkylated DNA repair protein AlkB [Escherichia coli 2.3916]
gi|417272223|ref|ZP_12059572.1| alkylated DNA repair protein AlkB [Escherichia coli 2.4168]
gi|417277644|ref|ZP_12064967.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2303]
gi|417291192|ref|ZP_12078473.1| alkylated DNA repair protein AlkB [Escherichia coli B41]
gi|417613683|ref|ZP_12264141.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_EH250]
gi|417618808|ref|ZP_12269222.1| alkylated DNA repair protein AlkB [Escherichia coli G58-1]
gi|417635145|ref|ZP_12285358.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_S1191]
gi|417947034|ref|ZP_12590237.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH140A]
gi|417975475|ref|ZP_12616274.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH001]
gi|418303608|ref|ZP_12915402.1| alkylated DNA repair protein AlkB [Escherichia coli UMNF18]
gi|419143152|ref|ZP_13687890.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6A]
gi|419149493|ref|ZP_13694146.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6B]
gi|419159889|ref|ZP_13704394.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6D]
gi|419165016|ref|ZP_13709473.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6E]
gi|419175733|ref|ZP_13719571.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7B]
gi|419809943|ref|ZP_14334826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O32:H37 str. P4]
gi|419938865|ref|ZP_14455674.1| 2OG-Fe(II) oxygenase [Escherichia coli 75]
gi|422766822|ref|ZP_16820549.1| alkylated DNA repair protein AlkB [Escherichia coli E1520]
gi|422771941|ref|ZP_16825630.1| alkylated DNA repair protein AlkB [Escherichia coli E482]
gi|422819611|ref|ZP_16867822.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
M919]
gi|423704406|ref|ZP_17678831.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H730]
gi|425115626|ref|ZP_18517427.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0566]
gi|425120351|ref|ZP_18522050.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0569]
gi|425273382|ref|ZP_18664794.1| alkylated DNA repair protein AlkB [Escherichia coli TW15901]
gi|425283925|ref|ZP_18674964.1| alkylated DNA repair protein AlkB [Escherichia coli TW00353]
gi|432564466|ref|ZP_19801048.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE51]
gi|432627864|ref|ZP_19863840.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE77]
gi|432637460|ref|ZP_19873330.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE81]
gi|432686046|ref|ZP_19921343.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE156]
gi|432692186|ref|ZP_19927414.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE161]
gi|432705006|ref|ZP_19940107.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE171]
gi|432737727|ref|ZP_19972485.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE42]
gi|432955732|ref|ZP_20147610.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE197]
gi|433048591|ref|ZP_20235944.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE120]
gi|442592186|ref|ZP_21010166.1| Alkylated DNA repair protein AlkB [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|450245750|ref|ZP_21900707.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
S17]
gi|113638|sp|P05050.1|ALKB_ECOLI RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB;
AltName: Full=Alkylated DNA repair protein AlkB;
AltName: Full=DNA oxidative demethylase AlkB
gi|145195|gb|AAA23416.1| AlkB protein (alkB) [Escherichia coli]
gi|405945|gb|AAA16409.1| alkB [Escherichia coli]
gi|1736853|dbj|BAA15995.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K12 substr. W3110]
gi|1788541|gb|AAC75272.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. MG1655]
gi|169889667|gb|ACB03374.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. DH10B]
gi|238861965|gb|ACR63963.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BW2952]
gi|260448694|gb|ACX39116.1| alkylated DNA repair protein AlkB [Escherichia coli DH1]
gi|299880510|gb|EFI88721.1| alkylated DNA repair protein AlkB [Escherichia coli MS 196-1]
gi|300314460|gb|EFJ64244.1| alkylated DNA repair protein AlkB [Escherichia coli MS 175-1]
gi|300451601|gb|EFK15221.1| alkylated DNA repair protein AlkB [Escherichia coli MS 116-1]
gi|301074228|gb|EFK89034.1| alkylated DNA repair protein AlkB [Escherichia coli MS 146-1]
gi|309702524|emb|CBJ01850.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli ETEC H10407]
gi|315136845|dbj|BAJ44004.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
DH1]
gi|315615473|gb|EFU96105.1| alkylated DNA repair protein AlkB [Escherichia coli 3431]
gi|323936827|gb|EGB33112.1| alkylated DNA repair protein AlkB [Escherichia coli E1520]
gi|323941093|gb|EGB37280.1| alkylated DNA repair protein AlkB [Escherichia coli E482]
gi|331039640|gb|EGI11860.1| alkylated DNA repair protein AlkB [Escherichia coli H736]
gi|339415706|gb|AEJ57378.1| alkylated DNA repair protein AlkB [Escherichia coli UMNF18]
gi|342361220|gb|EGU25364.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH140A]
gi|344195040|gb|EGV49111.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH001]
gi|345361877|gb|EGW94034.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_EH250]
gi|345375522|gb|EGX07469.1| alkylated DNA repair protein AlkB [Escherichia coli G58-1]
gi|345387428|gb|EGX17250.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_S1191]
gi|359332556|dbj|BAL39003.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. MDS42]
gi|377992615|gb|EHV55762.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6B]
gi|377993665|gb|EHV56796.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6A]
gi|378007233|gb|EHV70202.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6D]
gi|378011098|gb|EHV74043.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6E]
gi|378033136|gb|EHV95716.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7B]
gi|385157027|gb|EIF19020.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O32:H37 str. P4]
gi|385537024|gb|EIF83909.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
M919]
gi|385706645|gb|EIG43684.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H730]
gi|386121421|gb|EIG70036.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
4_1_40B]
gi|386226510|gb|EII48812.1| alkylated DNA repair protein AlkB [Escherichia coli 2.3916]
gi|386235923|gb|EII67899.1| alkylated DNA repair protein AlkB [Escherichia coli 2.4168]
gi|386239712|gb|EII76639.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2303]
gi|386253514|gb|EIJ03204.1| alkylated DNA repair protein AlkB [Escherichia coli B41]
gi|388409273|gb|EIL69577.1| 2OG-Fe(II) oxygenase [Escherichia coli 75]
gi|404291045|gb|EJZ47943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
1_1_43]
gi|408193164|gb|EKI18717.1| alkylated DNA repair protein AlkB [Escherichia coli TW15901]
gi|408201615|gb|EKI26764.1| alkylated DNA repair protein AlkB [Escherichia coli TW00353]
gi|408568113|gb|EKK44151.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0566]
gi|408569104|gb|EKK45109.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0569]
gi|431093252|gb|ELD98920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE51]
gi|431162475|gb|ELE62916.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE77]
gi|431170654|gb|ELE70843.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE81]
gi|431221828|gb|ELF19125.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE156]
gi|431226534|gb|ELF23693.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE161]
gi|431242676|gb|ELF37088.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE171]
gi|431282187|gb|ELF73072.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE42]
gi|431467118|gb|ELH47129.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE197]
gi|431564362|gb|ELI37536.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE120]
gi|441608339|emb|CCP99192.1| Alkylated DNA repair protein AlkB [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|449320005|gb|EMD10045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
S17]
Length = 216
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 190 QPLKAGFHPLTI-------DCRYNLTFRQ 211
>gi|420373902|ref|ZP_14873965.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella flexneri
1235-66]
gi|391316925|gb|EIQ74310.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella flexneri
1235-66]
Length = 227
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P GA P +P F + +A A P
Sbjct: 67 LGWTTDQHGYLYSPVDPLTGAHWPPLPEVFAEQCQQAA----------------TAAGYP 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 111 DFQPDACLINRYTPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GDV+++GG SR +HGV+ + T L + R NLTFRQ
Sbjct: 167 RVLLEHGDVVVWGGNSRLFYHGVQPL--KTGYHPLTGDC-----RYNLTFRQ 211
>gi|157144834|ref|YP_001452153.1| hypothetical protein CKO_00562 [Citrobacter koseri ATCC BAA-895]
gi|157082039|gb|ABV11717.1| hypothetical protein CKO_00562 [Citrobacter koseri ATCC BAA-895]
Length = 217
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F L +A I+ G D +
Sbjct: 68 LGWTTDQHGYLYSPVDPLTGRRWPPLPEVFTSLCHRA---------AIAAGYADFQ---- 114
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 115 ---PDACLINRYAPGSKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 167
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GDV+++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 168 RLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT-------ADCRYNLTFRQ 212
>gi|227502316|ref|ZP_03932365.1| alkylated DNA repair protein [Corynebacterium accolens ATCC 49725]
gi|227076958|gb|EEI14921.1| alkylated DNA repair protein [Corynebacterium accolens ATCC 49725]
Length = 227
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 369 YIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQ 424
++ W GI ++ +V+ I R P QP + G + + + LG+ W + +
Sbjct: 19 HVPGWVGIGKQKVLVEETREIARAYAHTPMAMVQPRLKSGGQMSVFQLHLGRYWHYPSYR 78
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y + +G P +P +L A++ + + ++E + P++ + N+
Sbjct: 79 YVDN--MEGTRVPPVPDSLRELAPVALRQAAQVA-------PELEPWVDNFVPEMALVNY 129
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVL 543
Y +G+H D E + PV+S SIGD A F G + V L SGD++
Sbjct: 130 YPPGSAMGMHVDDSEGSPA-----PVISLSIGDEALFRIGHTENRTKPWDDVTLCSGDLV 184
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+FGG R +HGV ++ T P E ++ GR+N+T RQ
Sbjct: 185 VFGGPKRFAYHGVVRVNDGTLP----EGCGLQEGRINITIRQ 222
>gi|418041880|ref|ZP_12680094.1| alkylated DNA repair protein AlkB [Escherichia coli W26]
gi|383475283|gb|EID67248.1| alkylated DNA repair protein AlkB [Escherichia coli W26]
Length = 216
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ + KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPSAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|331653647|ref|ZP_08354648.1| alkylated DNA repair protein AlkB [Escherichia coli M718]
gi|331048496|gb|EGI20572.1| alkylated DNA repair protein AlkB [Escherichia coli M718]
Length = 217
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 91 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 134
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 135 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 190
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 191 QPLKAGVHPLT-------TDCRYNLTFRQ 212
>gi|421813135|ref|ZP_16248859.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0416]
gi|408601441|gb|EKK75244.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0416]
Length = 216
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGVHPLT-------TDCRYNLTFRQ 211
>gi|393769879|ref|ZP_10358396.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. GXF4]
gi|392724701|gb|EIZ82049.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. GXF4]
Length = 217
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 12/114 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y+ ++GLHQD+DE+ D PVVS S+G +A F YG L+ + +
Sbjct: 102 PEACLINLYAPDARMGLHQDRDEA----DFSAPVVSLSLGATALFRYGGLQRSDPTRSIR 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMR-----RGRLNLTFRQ 585
L GD L+ GG SR I HGV++++ A LL E + GR NLT R+
Sbjct: 158 LHPGDALVIGGASRLIHHGVDRLY---AVNDLLAENPLPGFLPDGGRCNLTLRR 208
>gi|432417686|ref|ZP_19660290.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE44]
gi|430938930|gb|ELC59153.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE44]
Length = 216
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 190 QPLKAGFHPLTI-------DCRYNLTFRQ 211
>gi|227549556|ref|ZP_03979605.1| DNA-N1-methyladenine dioxygenase [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078320|gb|EEI16283.1| DNA-N1-methyladenine dioxygenase [Corynebacterium lipophiloflavum
DSM 44291]
Length = 215
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 368 NYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGT 427
N++E V+ +I R + P +P G + ++ LG W T+ Y
Sbjct: 24 NFLELEQQAELVVQTREIARSVAGTPVAMRRPMVGKG-QMKAHLLSLGWFW--ATNPYRL 80
Query: 428 SRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSA 487
R DG P +P F + + + +R + E + + + + NFY
Sbjct: 81 VRQVDGYAVPPVPDNFQDIADQVLAAAREVDEAVGE----------TIRVETALVNFYPP 130
Query: 488 TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGG 547
+G H D +E E+ PVVS SIGD F +V+L SGD L+FGG
Sbjct: 131 GAGMGEHVDAEEEAEN-----PVVSLSIGDDTLFRI-------EGHEVLLMSGDALVFGG 178
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+RR HGV T P ET ++ GR+N+T RQ
Sbjct: 179 PARRARHGVAGARAGTGPN----ETGLKEGRINITMRQ 212
>gi|386396702|ref|ZP_10081480.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM1253]
gi|385737328|gb|EIG57524.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM1253]
Length = 216
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y P GA P +P L G+A + +
Sbjct: 67 CGERGWITDHTGYRYDPIDPKTGAPWPAMPSVLRDLAGRAAE----------------QG 110
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G +
Sbjct: 111 SFKDFAPDACLVNRYEPGTRLSLHQDKDE----LDYSAPIVSVSLGLPATFLFGGMARND 166
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 167 KPRRFRLVHGDVVVWGGPSRLAYHGV-------APLADGEHALLGRTRVNLTFRR 214
>gi|83951116|ref|ZP_00959849.1| alkylated DNA repair protein, putative [Roseovarius nubinhibens
ISM]
gi|83839015|gb|EAP78311.1| alkylated DNA repair protein, putative [Roseovarius nubinhibens
ISM]
Length = 204
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 34/192 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
+ P R G + ++M G+ W D +Y + P+ G+ P IP + +
Sbjct: 41 LFAPVTRFGKPMSVRMTSAGRYGWFTDRRGYRYIEAHPS-GSPWPAIPDSVLSIWRDLVS 99
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D+R PD C+ N Y+ ++GLHQD+DE+ D PV+S
Sbjct: 100 DTRL--------------------PDCCLINHYTDKARMGLHQDRDEA----DFSWPVLS 135
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD A F G + V L SGDV++ GG +R +HGV++I P T+ +LL+
Sbjct: 136 VSLGDEALFRMGGQERSDPTRSVWLRSGDVVVMGGAARLAYHGVDRIKPGTS--TLLQGG 193
Query: 573 SMRRGRLNLTFR 584
GR+NLT R
Sbjct: 194 ----GRINLTLR 201
>gi|410089516|ref|ZP_11286131.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
viridiflava UASWS0038]
gi|409763227|gb|EKN48210.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
viridiflava UASWS0038]
Length = 225
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG DP +Y + P G P +P F +L A Q +A
Sbjct: 79 LGWVTDPHGYRYSHTNPQTGQSWPSMPDIFLELAQDAAQ----------------KAGFA 122
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDKDE D PVVS S+G A F +G L+ +
Sbjct: 123 DFVPDACLINRYVPGAKMSLHQDKDEH----DHRWPVVSVSLGIPAIFQFGGLQRSDRPE 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GGK R FHG+ + P P+ + R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGKDRLRFHGILPVKPAVHPQ-------LGEQRINLTFRK 223
>gi|417863460|ref|ZP_12508508.1| alkB [Escherichia coli O104:H4 str. C227-11]
gi|341916749|gb|EGT66366.1| alkB [Escherichia coli O104:H4 str. C227-11]
Length = 160
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 34 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 77
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 78 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 133
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 134 QPLKAGFHPLT-------TDCRYNLTFRQ 155
>gi|110677776|ref|YP_680783.1| alkylated DNA repair protein [Roseobacter denitrificans OCh 114]
gi|109453892|gb|ABG30097.1| alkylated DNA repair protein [Roseobacter denitrificans OCh 114]
Length = 199
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 452 QDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
QD A+ E + KD+ P+ C+ NFY ++GLHQDKDE PV+
Sbjct: 76 QDWPAIPESVLRVWKDLSGS--ARDPECCLVNFYGEGARMGLHQDKDEGSLE----WPVL 129
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S S+GD F G + + V L+SGDV++ GG +R +HGV++I +LLE
Sbjct: 130 SISLGDDGLFRMGHSERGSKTQSVWLQSGDVVVMGGAARLAYHGVDRI--RFGSSTLLEN 187
Query: 572 TSMRRGRLNLTFR 584
GRLNLT R
Sbjct: 188 G----GRLNLTLR 196
>gi|193068152|ref|ZP_03049116.1| alkylated DNA repair protein AlkB [Escherichia coli E110019]
gi|300918863|ref|ZP_07135429.1| alkylated DNA repair protein AlkB [Escherichia coli MS 115-1]
gi|432675329|ref|ZP_19910788.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE142]
gi|192958431|gb|EDV88870.1| alkylated DNA repair protein AlkB [Escherichia coli E110019]
gi|300414003|gb|EFJ97313.1| alkylated DNA repair protein AlkB [Escherichia coli MS 115-1]
gi|431213864|gb|ELF11719.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE142]
Length = 216
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+I+GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVIWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|417122221|ref|ZP_11971479.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0246]
gi|386147501|gb|EIG93941.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0246]
Length = 216
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+I+GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVIWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|432719334|ref|ZP_19954303.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE9]
gi|431263146|gb|ELF55135.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE9]
Length = 216
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R A+ P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G
Sbjct: 102 RAATAADYPDFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFG 157
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+ K+++LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 158 GLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT-------ADCRYNLTFR 210
Query: 585 Q 585
Q
Sbjct: 211 Q 211
>gi|417629479|ref|ZP_12279716.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_MHI813]
gi|345372226|gb|EGX04190.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_MHI813]
Length = 215
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 89 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+I+GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVIWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 189 QPLKARFHPLT-------TDCRYNLTFRQ 210
>gi|296448181|ref|ZP_06890079.1| 2OG-Fe(II) oxygenase [Methylosinus trichosporium OB3b]
gi|296254312|gb|EFH01441.1| 2OG-Fe(II) oxygenase [Methylosinus trichosporium OB3b]
Length = 205
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P C+ N Y + ++GLHQD+DE+ ++D P++S S+G F G + ++
Sbjct: 100 PQACLVNVYDSAARMGLHQDRDEA--ALDA--PILSISLGADCRFRLGGAKRGDPSRAFA 155
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD L GG R FHGV+KI P+ AP+ L+ + GR+NLT R+
Sbjct: 156 LSSGDALTLGGPGRLRFHGVDKILPEIAPR-LVSPLLAQGGRVNLTLRR 203
>gi|297539834|ref|YP_003675603.1| 2OG-Fe(II) oxygenase [Methylotenera versatilis 301]
gi|297259181|gb|ADI31026.1| 2OG-Fe(II) oxygenase [Methylotenera versatilis 301]
Length = 212
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y P A P++PV F QL A EA
Sbjct: 66 LGWVSDRQGYRYDMKDPATNAAWPLMPVSFQQLATFAAA----------------EAGFD 109
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y +GLHQDK+E +D P+VS S+G A F +G L
Sbjct: 110 DFVPDACLINQYQVGASMGLHQDKNE----LDFNQPIVSVSLGVPAVFQFGGLTRTDKTL 165
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+ L GDV+++GG+SR FHG+ + +T P + R NLTFR+
Sbjct: 166 KIPLVHGDVVVWGGQSRLNFHGIAPLKMNTHP-------ILGAYRYNLTFRK 210
>gi|419922114|ref|ZP_14440137.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-15]
gi|388396799|gb|EIL57869.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-15]
Length = 216
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+I+GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVIWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|194292874|ref|YP_002008781.1| alkylated DNA repair protein [Cupriavidus taiwanensis LMG 19424]
gi|193226778|emb|CAQ72729.1| Alkylated DNA repair protein [Cupriavidus taiwanensis LMG 19424]
Length = 220
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 377 TEEVKIVKICRDLGLGPGG-FYQPGYRDGANLYLKMM-CLGKNW--DPETSQYGTSRPTD 432
+ EV + + L L P PG G + + M C W D +Y P
Sbjct: 36 SAEVLLADVQTILALAPWRHMVTPG---GLKMSVAMTNCGACGWVSDARGYRYDAVDPLS 92
Query: 433 GAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLG 492
G P +P F +L A + +A +PD C+ N Y +L
Sbjct: 93 GQAWPDMPASFRELAASAAE----------------QAGFAGFAPDACLINRYVPGTRLS 136
Query: 493 LHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRI 552
LHQD+DE D P+VS S+G A FL+G +R +++ L GDV+++GG SR
Sbjct: 137 LHQDRDER----DFTAPIVSVSLGLPAVFLFGGMRRADKPQRIRLAHGDVVVWGGPSRLA 192
Query: 553 FHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
FHGV AP + + + R+NLTFR+
Sbjct: 193 FHGV-------APLADGDHPLLGPLRINLTFRK 218
>gi|432869580|ref|ZP_20090173.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE147]
gi|431410166|gb|ELG93328.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE147]
Length = 216
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGFPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|334131392|ref|ZP_08505156.1| Alkylated DNA repair protein AlkB [Methyloversatilis universalis
FAM5]
gi|333443559|gb|EGK71522.1| Alkylated DNA repair protein AlkB [Methyloversatilis universalis
FAM5]
Length = 214
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG + D +Y P G P +P F L A + A P
Sbjct: 68 LGWHSDEGGYRYTARDPHTGHPWPALPELFVALARDAAE----------------RAGFP 111
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y +L LHQD++E D+C P+VS S+G A FL+G L+ +
Sbjct: 112 GFVPDACLINRYQPGTRLTLHQDRNER----DECAPIVSVSLGIPATFLFGGLQRSDPVR 167
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +FHGV+ P E R+NLTFR+
Sbjct: 168 RLRLVHGDVVVWGGPSRFVFHGVQ-------PLMHAEHPLTGACRINLTFRR 212
>gi|402489576|ref|ZP_10836370.1| 2OG-Fe(II) oxygenase [Rhizobium sp. CCGE 510]
gi|401811368|gb|EJT03736.1| 2OG-Fe(II) oxygenase [Rhizobium sp. CCGE 510]
Length = 205
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+ ++GLHQDKDE D PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYADEARMGLHQDKDER----DLQAPVVSISLGNSCLFRVGGLNRNDPTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|422365132|ref|ZP_16445636.1| alkylated DNA repair protein AlkB [Escherichia coli MS 153-1]
gi|315292166|gb|EFU51518.1| alkylated DNA repair protein AlkB [Escherichia coli MS 153-1]
Length = 216
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPPT-------TDCRYNLTFRQ 211
>gi|227115211|ref|ZP_03828867.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 218
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P P +P F +L +A ++ G D E
Sbjct: 70 LGWVTDEHGYRYTAQDPLSREAWPSMPEVFSRLAQQAASEA---------GFADFE---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDK+E D P+VS S+G SA FL+G + A+
Sbjct: 117 ---PDACLINRYDVGTRMSLHQDKNER----DFHQPIVSVSLGLSATFLFGGMARSDKAQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG+SR FHG+ + P+ + +E R NLTFR+
Sbjct: 170 RVALTHGDVVVWGGESRLYFHGILPLKSGIMPEGIPDEC-----RFNLTFRK 216
>gi|432809866|ref|ZP_20043759.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE101]
gi|431362634|gb|ELG49212.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE101]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|395497493|ref|ZP_10429072.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
PAMC 25886]
Length = 226
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG DP +Y P G P +P QL A+ G D E
Sbjct: 80 LGWTTDPTGYRYSPVDPNSGQPWPALPEALRQL---------AITVAADAGFADFE---- 126
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E + PVVS S+G A FL+G +
Sbjct: 127 ---PDACLINRYVPGAKMSLHQDKNER----NYAAPVVSVSLGLPAIFLFGGHERSDKPQ 179
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
KV L GDV+++GG R FHGV I P T P M R+NLTFR
Sbjct: 180 KVSLFHGDVVVWGGVDRLRFHGVMPIKPGTHP-------VMGPQRINLTFR 223
>gi|312207967|pdb|3O1M|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207970|pdb|3O1O|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207973|pdb|3O1P|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207976|pdb|3O1R|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207979|pdb|3O1S|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207982|pdb|3O1T|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207985|pdb|3O1U|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207988|pdb|3O1V|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
Length = 206
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 80 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLCLHQD 123
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 124 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 179
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 180 QPLKAGFHPLTI-------DCRYNLTFRQ 201
>gi|422334305|ref|ZP_16415312.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
4_1_47FAA]
gi|373244692|gb|EHP64172.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
4_1_47FAA]
Length = 229
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|432617282|ref|ZP_19853397.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE75]
gi|431154223|gb|ELE55045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE75]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|331663718|ref|ZP_08364628.1| alkylated DNA repair protein AlkB [Escherichia coli TA143]
gi|432771174|ref|ZP_20005513.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE50]
gi|432962380|ref|ZP_20152033.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE202]
gi|433063674|ref|ZP_20250597.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE125]
gi|331059517|gb|EGI31494.1| alkylated DNA repair protein AlkB [Escherichia coli TA143]
gi|431314871|gb|ELG02803.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE50]
gi|431474171|gb|ELH53993.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE202]
gi|431581668|gb|ELI54115.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE125]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|185177840|pdb|3BIE|A Chain A, X-Ray Structure Of E Coli Alkb Bound To Dsdna Containing
1meaT WITH Mn And 2kg
Length = 202
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 78 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLCLHQD 121
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 122 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 177
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 178 QPLKAGFHPLTI-------DCRYNLTFRQ 199
>gi|170746566|ref|YP_001752826.1| 2OG-Fe(II) oxygenase [Methylobacterium radiotolerans JCM 2831]
gi|170653088|gb|ACB22143.1| 2OG-Fe(II) oxygenase [Methylobacterium radiotolerans JCM 2831]
Length = 215
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILES 539
C+ N Y+ ++GLHQD+DE+ D PVVS S+G +A F YG L + + L++
Sbjct: 105 CLINLYAPGTRMGLHQDRDEA----DLAAPVVSLSLGAAALFRYGGLSRSGPTRSIRLQA 160
Query: 540 GDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRR--GRLNLTFRQ 585
GD L+ GG SR +FHG+++++ D + + + GR NLT R+
Sbjct: 161 GDALVMGGASRLVFHGIDRLYADGDLLAAADGPAFLPPGGRCNLTLRR 208
>gi|417106609|ref|ZP_11962279.1| alkylated DNA repair protein [Rhizobium etli CNPAF512]
gi|327189994|gb|EGE57116.1| alkylated DNA repair protein [Rhizobium etli CNPAF512]
Length = 203
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE PVVS S+G S F G L
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDERNLQA----PVVSISLGSSCLFRVGGLNRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|419365710|ref|ZP_13906872.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13E]
gi|378212945|gb|EHX73264.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13E]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|185177837|pdb|3BI3|A Chain A, X-Ray Structure Of Alkb Protein Bound To Dsdna Containing
1meaA WITH Cofactors
Length = 201
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 78 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLCLHQD 121
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 122 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 177
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 178 QPLKAGFHPLTI-------DCRYNLTFRQ 199
>gi|157156371|ref|YP_001463563.1| alkylated DNA repair protein AlkB [Escherichia coli E24377A]
gi|191165393|ref|ZP_03027235.1| alkylated DNA repair protein AlkB [Escherichia coli B7A]
gi|218554781|ref|YP_002387694.1| oxidative demethylase [Escherichia coli IAI1]
gi|218695825|ref|YP_002403492.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli 55989]
gi|309793096|ref|ZP_07687524.1| alkylated DNA repair protein AlkB [Escherichia coli MS 145-7]
gi|407470104|ref|YP_006783453.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407481233|ref|YP_006778382.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410481780|ref|YP_006769326.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|415829090|ref|ZP_11515473.1| alkylated DNA repair protein AlkB [Escherichia coli OK1357]
gi|417133570|ref|ZP_11978355.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0588]
gi|417667634|ref|ZP_12317179.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_O31]
gi|417805779|ref|ZP_12452728.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. LB226692]
gi|417833519|ref|ZP_12479967.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 01-09591]
gi|419345878|ref|ZP_13887253.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13A]
gi|419350293|ref|ZP_13891631.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13B]
gi|419355709|ref|ZP_13896967.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13C]
gi|419360798|ref|ZP_13902016.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13D]
gi|419930918|ref|ZP_14448509.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-1]
gi|422988337|ref|ZP_16979110.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C227-11]
gi|422995228|ref|ZP_16985992.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C236-11]
gi|423000303|ref|ZP_16991057.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 09-7901]
gi|423003972|ref|ZP_16994718.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 04-8351]
gi|423010545|ref|ZP_17001279.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-3677]
gi|423019772|ref|ZP_17010481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4404]
gi|423024939|ref|ZP_17015636.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4522]
gi|423030760|ref|ZP_17021448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4623]
gi|423038586|ref|ZP_17029260.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423043705|ref|ZP_17034372.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423045434|ref|ZP_17036094.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423053973|ref|ZP_17042780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423060948|ref|ZP_17049744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|429719817|ref|ZP_19254748.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429771699|ref|ZP_19303722.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02030]
gi|429781631|ref|ZP_19313560.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429785371|ref|ZP_19317269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02092]
gi|429791260|ref|ZP_19323117.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02093]
gi|429797087|ref|ZP_19328895.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02281]
gi|429798685|ref|ZP_19330486.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02318]
gi|429807198|ref|ZP_19338925.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02913]
gi|429812098|ref|ZP_19343784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03439]
gi|429817618|ref|ZP_19349259.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-04080]
gi|429822829|ref|ZP_19354427.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03943]
gi|429904209|ref|ZP_19370188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429908346|ref|ZP_19374310.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429914217|ref|ZP_19380165.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429919248|ref|ZP_19385180.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429925067|ref|ZP_19390981.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429929004|ref|ZP_19394906.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429935543|ref|ZP_19401429.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429941223|ref|ZP_19407097.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429943903|ref|ZP_19409766.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429951503|ref|ZP_19417349.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429954815|ref|ZP_19420647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432765609|ref|ZP_20000047.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE48]
gi|157078401|gb|ABV18109.1| alkylated DNA repair protein AlkB [Escherichia coli E24377A]
gi|190904556|gb|EDV64263.1| alkylated DNA repair protein AlkB [Escherichia coli B7A]
gi|218352557|emb|CAU98336.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli 55989]
gi|218361549|emb|CAQ99140.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli IAI1]
gi|308123382|gb|EFO60644.1| alkylated DNA repair protein AlkB [Escherichia coli MS 145-7]
gi|323184163|gb|EFZ69540.1| alkylated DNA repair protein AlkB [Escherichia coli OK1357]
gi|340734401|gb|EGR63531.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 01-09591]
gi|340739691|gb|EGR73923.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. LB226692]
gi|354862063|gb|EHF22501.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C236-11]
gi|354867348|gb|EHF27770.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C227-11]
gi|354869419|gb|EHF29829.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 04-8351]
gi|354873274|gb|EHF33651.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 09-7901]
gi|354880028|gb|EHF40364.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-3677]
gi|354889452|gb|EHF49701.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4404]
gi|354893047|gb|EHF53251.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4522]
gi|354895184|gb|EHF55373.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354897458|gb|EHF57616.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4623]
gi|354898819|gb|EHF58970.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354912870|gb|EHF72868.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354915875|gb|EHF75851.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917790|gb|EHF77752.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|378186991|gb|EHX47612.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13A]
gi|378200471|gb|EHX60926.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13B]
gi|378201039|gb|EHX61492.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13C]
gi|378203239|gb|EHX63663.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13D]
gi|386151424|gb|EIH02713.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0588]
gi|388399171|gb|EIL59973.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-1]
gi|397784780|gb|EJK95633.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_O31]
gi|406776942|gb|AFS56366.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407053530|gb|AFS73581.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407066139|gb|AFS87186.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|429346208|gb|EKY82989.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429348960|gb|EKY85716.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02092]
gi|429361182|gb|EKY97839.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02030]
gi|429362613|gb|EKY99260.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02093]
gi|429362884|gb|EKY99529.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02281]
gi|429366002|gb|EKZ02614.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02318]
gi|429376857|gb|EKZ13385.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02913]
gi|429379331|gb|EKZ15832.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03439]
gi|429380899|gb|EKZ17388.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03943]
gi|429393120|gb|EKZ29519.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-04080]
gi|429405221|gb|EKZ41487.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429406987|gb|EKZ43241.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410735|gb|EKZ46956.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429414447|gb|EKZ50622.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421056|gb|EKZ57178.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429429390|gb|EKZ65459.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429432077|gb|EKZ68117.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429436283|gb|EKZ72299.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429438488|gb|EKZ74481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429448110|gb|EKZ84027.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429451828|gb|EKZ87716.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429457772|gb|EKZ93610.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0466]
gi|431309784|gb|ELF97977.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE48]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|419381481|ref|ZP_13922432.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14C]
gi|378227848|gb|EHX88016.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14C]
Length = 215
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 89 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 189 QPLKAGFHPLT-------TDCRYNLTFRQ 210
>gi|419063429|ref|ZP_13610157.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3D]
gi|419093275|ref|ZP_13638560.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4C]
gi|377909904|gb|EHU74102.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3D]
gi|377941717|gb|EHV05454.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4C]
Length = 229
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|415813347|ref|ZP_11505156.1| alkylated DNA repair protein AlkB [Escherichia coli LT-68]
gi|323171888|gb|EFZ57532.1| alkylated DNA repair protein AlkB [Escherichia coli LT-68]
Length = 229
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|419132231|ref|ZP_13677068.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5D]
gi|424091187|ref|ZP_17827132.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1996]
gi|444948077|ref|ZP_21266399.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0839]
gi|377975194|gb|EHV38515.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5D]
gi|390641669|gb|EIN21093.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1996]
gi|444557657|gb|ELV34983.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0839]
Length = 215
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 89 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 189 QPLKAGFHPLT-------TDCRYNLTFRQ 210
>gi|120555020|ref|YP_959371.1| 2OG-Fe(II) oxygenase [Marinobacter aquaeolei VT8]
gi|120324869|gb|ABM19184.1| DNA-N1-methyladenine dioxygenase [Marinobacter aquaeolei VT8]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 80/185 (43%), Gaps = 30/185 (16%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + M C G W D +Y P G P +P F L K+ +
Sbjct: 57 GHQMSAAMTCCGPLGWVTDETGYRYQPQDPLSGLPWPAMPESFVSLACKSAR-------- 108
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
EA P PD C+ N Y K+GLHQDKDE D P+VS S+G
Sbjct: 109 --------EAGFPGFDPDACLINRYQPGAKMGLHQDKDEK----DFAWPIVSVSLGLPIV 156
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F +G L+ +++LE GDV+++GG +R +HGV + P + R N
Sbjct: 157 FQFGGLKRSDRPARILLEHGDVVVWGGPARLRYHGVLTLKAGEHPVT-------GSARYN 209
Query: 581 LTFRQ 585
LTFR+
Sbjct: 210 LTFRK 214
>gi|420391944|ref|ZP_14891197.1| alkylated DNA repair protein AlkB [Escherichia coli EPEC C342-62]
gi|425423031|ref|ZP_18804199.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1288]
gi|391312625|gb|EIQ70233.1| alkylated DNA repair protein AlkB [Escherichia coli EPEC C342-62]
gi|408343586|gb|EKJ57980.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1288]
Length = 215
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 89 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 189 QPLKAGFHPLT-------TDCRYNLTFRQ 210
>gi|416898276|ref|ZP_11927840.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_7v]
gi|417115172|ref|ZP_11966308.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2741]
gi|422799518|ref|ZP_16848017.1| alkylated DNA repair protein AlkB [Escherichia coli M863]
gi|323967653|gb|EGB63065.1| alkylated DNA repair protein AlkB [Escherichia coli M863]
gi|327252480|gb|EGE64139.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_7v]
gi|386140591|gb|EIG81743.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2741]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFKPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|420348093|ref|ZP_14849482.1| alkylated DNA repair protein AlkB [Shigella boydii 965-58]
gi|391269096|gb|EIQ28008.1| alkylated DNA repair protein AlkB [Shigella boydii 965-58]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|254295468|ref|YP_003061491.1| 2OG-Fe(II) oxygenase [Hirschia baltica ATCC 49814]
gi|254043999|gb|ACT60794.1| 2OG-Fe(II) oxygenase [Hirschia baltica ATCC 49814]
Length = 199
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P C+ N+Y K+GLH D DE D PVVS S+GDSA F G L K
Sbjct: 98 PQACLVNYYDENAKMGLHCDGDEE----DINAPVVSISLGDSARFRLGGLNRRDPTKSFK 153
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDV+I GG++R +HG+++I+ ++ +LL+ GRLNLT R+
Sbjct: 154 LNSGDVIILGGQARLAYHGIDRIYGGSS--TLLKNG----GRLNLTLRR 196
>gi|427805351|ref|ZP_18972418.1| DNA repair system specific for alkylated DNA [Escherichia coli
chi7122]
gi|427809909|ref|ZP_18976974.1| DNA repair system specific for alkylated DNA [Escherichia coli]
gi|443618292|ref|YP_007382148.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
APEC O78]
gi|412963533|emb|CCK47458.1| DNA repair system specific for alkylated DNA [Escherichia coli
chi7122]
gi|412970088|emb|CCJ44731.1| DNA repair system specific for alkylated DNA [Escherichia coli]
gi|443422800|gb|AGC87704.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
APEC O78]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|300903592|ref|ZP_07121512.1| alkylated DNA repair protein AlkB [Escherichia coli MS 84-1]
gi|301306556|ref|ZP_07212619.1| alkylated DNA repair protein AlkB [Escherichia coli MS 124-1]
gi|415863941|ref|ZP_11537092.1| alkylated DNA repair protein AlkB [Escherichia coli MS 85-1]
gi|417154894|ref|ZP_11993023.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0497]
gi|417581739|ref|ZP_12232541.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_B2F1]
gi|417639966|ref|ZP_12290107.1| alkylated DNA repair protein AlkB [Escherichia coli TX1999]
gi|419170886|ref|ZP_13714772.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7A]
gi|419181531|ref|ZP_13725144.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7C]
gi|419186972|ref|ZP_13730486.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7D]
gi|419192263|ref|ZP_13735716.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7E]
gi|419278715|ref|ZP_13820962.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10E]
gi|419376148|ref|ZP_13917172.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14B]
gi|419392308|ref|ZP_13933120.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15A]
gi|419397349|ref|ZP_13938117.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15B]
gi|419402690|ref|ZP_13943414.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15C]
gi|419407808|ref|ZP_13948497.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15D]
gi|419413395|ref|ZP_13954047.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15E]
gi|419862573|ref|ZP_14385167.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H25 str. CVM9340]
gi|420386277|ref|ZP_14885627.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa12]
gi|422777505|ref|ZP_16831157.1| alkylated DNA repair protein AlkB [Escherichia coli H120]
gi|425289222|ref|ZP_18680070.1| alkylated DNA repair protein AlkB [Escherichia coli 3006]
gi|432526989|ref|ZP_19764082.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE233]
gi|433130784|ref|ZP_20316219.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE163]
gi|433135446|ref|ZP_20320790.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE166]
gi|300404395|gb|EFJ87933.1| alkylated DNA repair protein AlkB [Escherichia coli MS 84-1]
gi|300838216|gb|EFK65976.1| alkylated DNA repair protein AlkB [Escherichia coli MS 124-1]
gi|315255146|gb|EFU35114.1| alkylated DNA repair protein AlkB [Escherichia coli MS 85-1]
gi|323945028|gb|EGB41093.1| alkylated DNA repair protein AlkB [Escherichia coli H120]
gi|345337510|gb|EGW69942.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_B2F1]
gi|345392968|gb|EGX22746.1| alkylated DNA repair protein AlkB [Escherichia coli TX1999]
gi|378014930|gb|EHV77827.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7A]
gi|378023164|gb|EHV85841.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7C]
gi|378028964|gb|EHV91580.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7D]
gi|378038327|gb|EHW00842.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7E]
gi|378128140|gb|EHW89525.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10E]
gi|378218871|gb|EHX79140.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14B]
gi|378237508|gb|EHX97531.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15A]
gi|378243470|gb|EHY03416.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15B]
gi|378247224|gb|EHY07143.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15C]
gi|378254187|gb|EHY14051.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15D]
gi|378258827|gb|EHY18643.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15E]
gi|386167983|gb|EIH34499.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0497]
gi|388344713|gb|EIL10537.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H25 str. CVM9340]
gi|391304987|gb|EIQ62782.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa12]
gi|408213774|gb|EKI38253.1| alkylated DNA repair protein AlkB [Escherichia coli 3006]
gi|431063248|gb|ELD72497.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE233]
gi|431645581|gb|ELJ13125.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE163]
gi|431656124|gb|ELJ23145.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE166]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|222084240|ref|YP_002542766.1| alkylated DNA repair protein AlkB [Agrobacterium radiobacter K84]
gi|221721688|gb|ACM24844.1| alkylated DNA repair protein AlkB [Agrobacterium radiobacter K84]
Length = 181
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+ ++GLHQD+DE D PV+S S+G++ F G L
Sbjct: 80 PEACLVNFYNDDARMGLHQDRDEQ----DLAAPVLSISLGNTCLFRVGGLNRNDRTLSFK 135
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 136 LSSGDIVVLGGEGRLCFHGVDRIHPATS--TLLKSG----GRINLTLRR 178
>gi|194435998|ref|ZP_03068100.1| alkylated DNA repair protein AlkB [Escherichia coli 101-1]
gi|251785575|ref|YP_002999879.1| AlkB repair system for alkylated DNA and RNA [Escherichia coli
BL21(DE3)]
gi|253772863|ref|YP_003035694.1| alkylated DNA repair protein AlkB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162224|ref|YP_003045332.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli B str. REL606]
gi|254288985|ref|YP_003054733.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BL21(DE3)]
gi|300931443|ref|ZP_07146772.1| alkylated DNA repair protein AlkB [Escherichia coli MS 187-1]
gi|386614824|ref|YP_006134490.1| alkylated DNA repair protein AlkB [Escherichia coli UMNK88]
gi|421778119|ref|ZP_16214702.1| alkylated DNA repair protein AlkB [Escherichia coli AD30]
gi|422786829|ref|ZP_16839568.1| alkylated DNA repair protein AlkB [Escherichia coli H489]
gi|422790533|ref|ZP_16843237.1| alkylated DNA repair protein AlkB [Escherichia coli TA007]
gi|432534487|ref|ZP_19771462.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE234]
gi|432576491|ref|ZP_19812951.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE56]
gi|432875851|ref|ZP_20094011.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE154]
gi|442598013|ref|ZP_21015787.1| Alkylated DNA repair protein AlkB [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|194424726|gb|EDX40711.1| alkylated DNA repair protein AlkB [Escherichia coli 101-1]
gi|242377848|emb|CAQ32615.1| AlkB repair system for alkylated DNA and RNA [Escherichia coli
BL21(DE3)]
gi|253323907|gb|ACT28509.1| alkylated DNA repair protein AlkB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974125|gb|ACT39796.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli B str. REL606]
gi|253978292|gb|ACT43962.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BL21(DE3)]
gi|300460813|gb|EFK24306.1| alkylated DNA repair protein AlkB [Escherichia coli MS 187-1]
gi|323961518|gb|EGB57126.1| alkylated DNA repair protein AlkB [Escherichia coli H489]
gi|323973087|gb|EGB68281.1| alkylated DNA repair protein AlkB [Escherichia coli TA007]
gi|332343993|gb|AEE57327.1| alkylated DNA repair protein AlkB [Escherichia coli UMNK88]
gi|408456792|gb|EKJ80600.1| alkylated DNA repair protein AlkB [Escherichia coli AD30]
gi|431060123|gb|ELD69457.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE234]
gi|431114526|gb|ELE18054.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE56]
gi|431420123|gb|ELH02455.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE154]
gi|441653287|emb|CCQ01490.1| Alkylated DNA repair protein AlkB [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|307311214|ref|ZP_07590858.1| alkylated DNA repair protein AlkB [Escherichia coli W]
gi|378712339|ref|YP_005277232.1| alkylated DNA repair protein AlkB [Escherichia coli KO11FL]
gi|386609603|ref|YP_006125089.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli W]
gi|386700801|ref|YP_006164638.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KO11FL]
gi|386710087|ref|YP_006173808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli W]
gi|306908720|gb|EFN39217.1| alkylated DNA repair protein AlkB [Escherichia coli W]
gi|315061520|gb|ADT75847.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli W]
gi|323377900|gb|ADX50168.1| alkylated DNA repair protein AlkB [Escherichia coli KO11FL]
gi|383392328|gb|AFH17286.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KO11FL]
gi|383405779|gb|AFH12022.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli W]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+I+GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVIWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|114571541|ref|YP_758221.1| DNA-N1-methyladenine dioxygenase [Maricaulis maris MCS10]
gi|114342003|gb|ABI67283.1| DNA-N1-methyladenine dioxygenase [Maricaulis maris MCS10]
Length = 212
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 467 DIEAELPCMSPDI--CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
D+ EL D C+ N+Y+ ++GLH D DE E+ D VVS S+GD A F G
Sbjct: 93 DLWRELAAYPADAEACLVNWYAPDSRMGLHVDWDE--EATDAA--VVSISLGDKARFRIG 148
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMR-RGRLNLTF 583
+ ++L SGDV++ GG++RR +HGV++I+P T+ +LL + GR+NLT
Sbjct: 149 GPQRGGKTGSMVLSSGDVVVLGGEARRCYHGVDRIYPGTS--TLLPPDAFPGGGRINLTM 206
Query: 584 RQ 585
R+
Sbjct: 207 RR 208
>gi|298381361|ref|ZP_06990960.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
FVEC1302]
gi|298278803|gb|EFI20317.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
FVEC1302]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|254460095|ref|ZP_05073511.1| alkylated DNA repair protein [Rhodobacterales bacterium HTCC2083]
gi|206676684|gb|EDZ41171.1| alkylated DNA repair protein [Rhodobacteraceae bacterium HTCC2083]
Length = 176
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+P+ C+ NFY K+G+HQD+DE D PVVS S+GD A F G+L + +
Sbjct: 75 TPECCLMNFYGEDAKMGMHQDRDEG----DFSYPVVSVSLGDDALFRIGNLERGGKTESI 130
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG +R +HGV+KI ++ + GRLNLT R
Sbjct: 131 WLTSGDVVVMGGDARLTYHGVDKIRFGSS------RVLAKGGRLNLTLR 173
>gi|193062349|ref|ZP_03043444.1| alkylated DNA repair protein AlkB [Escherichia coli E22]
gi|194427195|ref|ZP_03059746.1| alkylated DNA repair protein AlkB [Escherichia coli B171]
gi|260844815|ref|YP_003222593.1| oxidative demethylase AlkB [Escherichia coli O103:H2 str. 12009]
gi|293415512|ref|ZP_06658155.1| alkylated DNA repair protein [Escherichia coli B185]
gi|300818184|ref|ZP_07098396.1| alkylated DNA repair protein AlkB [Escherichia coli MS 107-1]
gi|332278630|ref|ZP_08391043.1| alkylated DNA repair protein [Shigella sp. D9]
gi|415798386|ref|ZP_11498404.1| alkylated DNA repair protein AlkB [Escherichia coli E128010]
gi|415876073|ref|ZP_11542646.1| alkylated DNA repair protein AlkB [Escherichia coli MS 79-10]
gi|417175716|ref|ZP_12005512.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2608]
gi|417182854|ref|ZP_12009411.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0624]
gi|417254168|ref|ZP_12045924.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0967]
gi|417624110|ref|ZP_12274409.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_H.1.8]
gi|419290160|ref|ZP_13832252.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11A]
gi|419295487|ref|ZP_13837533.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11B]
gi|419300947|ref|ZP_13842946.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11C]
gi|419307079|ref|ZP_13848979.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11D]
gi|419312085|ref|ZP_13853947.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11E]
gi|419317496|ref|ZP_13859299.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12A]
gi|419323670|ref|ZP_13865363.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12B]
gi|419329635|ref|ZP_13871239.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12C]
gi|419335199|ref|ZP_13876732.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12D]
gi|419340666|ref|ZP_13882130.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12E]
gi|419870585|ref|ZP_14392678.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H2 str. CVM9450]
gi|432806373|ref|ZP_20040301.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE91]
gi|432935007|ref|ZP_20134444.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE184]
gi|433194294|ref|ZP_20378284.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE90]
gi|192932015|gb|EDV84614.1| alkylated DNA repair protein AlkB [Escherichia coli E22]
gi|194414816|gb|EDX31087.1| alkylated DNA repair protein AlkB [Escherichia coli B171]
gi|257759962|dbj|BAI31459.1| oxidative demethylase AlkB [Escherichia coli O103:H2 str. 12009]
gi|291433160|gb|EFF06139.1| alkylated DNA repair protein [Escherichia coli B185]
gi|300529328|gb|EFK50390.1| alkylated DNA repair protein AlkB [Escherichia coli MS 107-1]
gi|323161678|gb|EFZ47561.1| alkylated DNA repair protein AlkB [Escherichia coli E128010]
gi|332100982|gb|EGJ04328.1| alkylated DNA repair protein [Shigella sp. D9]
gi|342929004|gb|EGU97726.1| alkylated DNA repair protein AlkB [Escherichia coli MS 79-10]
gi|345377071|gb|EGX09003.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_H.1.8]
gi|378129961|gb|EHW91331.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11A]
gi|378142574|gb|EHX03776.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11B]
gi|378149066|gb|EHX10199.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11D]
gi|378150563|gb|EHX11678.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11C]
gi|378157713|gb|EHX18744.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11E]
gi|378164746|gb|EHX25687.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12B]
gi|378169079|gb|EHX29979.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12A]
gi|378169951|gb|EHX30837.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12C]
gi|378182278|gb|EHX42931.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12D]
gi|378187577|gb|EHX48188.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12E]
gi|386178408|gb|EIH55887.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2608]
gi|386184707|gb|EIH67446.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0624]
gi|386216095|gb|EII32587.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0967]
gi|388339386|gb|EIL05771.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H2 str. CVM9450]
gi|431354515|gb|ELG41241.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE91]
gi|431453175|gb|ELH33585.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE184]
gi|431715744|gb|ELJ79889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE90]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|432793426|ref|ZP_20027510.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE78]
gi|432799384|ref|ZP_20033406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE79]
gi|431339089|gb|ELG26151.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE78]
gi|431343250|gb|ELG30214.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE79]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------SDCRYNLTFRQ 211
>gi|308178511|ref|YP_003917917.1| 2OG-Fe(II) oxygenase superfamily protein [Arthrobacter arilaitensis
Re117]
gi|307745974|emb|CBT76946.1| 2OG-Fe(II) oxygenase superfamily protein [Arthrobacter arilaitensis
Re117]
Length = 224
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGAN---LYLKMMCLGKNWDPETSQY 425
++ W + IV+ + G GP P +R N + ++ +CLG +W P
Sbjct: 23 HLPGWLDTAAQQWIVRRFFEWGDGP----VPPHRTTVNGHPMSVQSLCLGWHWSPHRYS- 77
Query: 426 GTSRPTDGAVPPIIPVEFHQL-VGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
T+ DG + + P+E + +GK +A+ E R+ + + PD+ + N+
Sbjct: 78 KTADDLDGQL--VAPMEQWLIRLGK-----QAVAEATGDLRRAQDYQ-----PDVALVNY 125
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVILESGDVL 543
Y +G+HQD +E + PVVS SIGDSA F G+ + +++ L SGD+
Sbjct: 126 YDVQATMGMHQDAEERINA-----PVVSLSIGDSATFRLGNTENRNRPWQELRLASGDLF 180
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+F G SR +H V KI TAP L R+N+T RQ
Sbjct: 181 VFDGPSRFAYHSVTKIHAGTAPAGLGLGGG----RINITLRQ 218
>gi|26248599|ref|NP_754639.1| alkylated DNA repair protein AlkB [Escherichia coli CFT073]
gi|218690375|ref|YP_002398587.1| N1-methyladenine or N3-methylcytosine DNA lesion oxidative
demethylase [Escherichia coli ED1a]
gi|227887270|ref|ZP_04005075.1| alkylated DNA repair protein AlkB [Escherichia coli 83972]
gi|300983163|ref|ZP_07176468.1| alkylated DNA repair protein AlkB [Escherichia coli MS 45-1]
gi|301048957|ref|ZP_07195947.1| alkylated DNA repair protein AlkB [Escherichia coli MS 185-1]
gi|386630009|ref|YP_006149729.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i2']
gi|386634929|ref|YP_006154648.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i14']
gi|386639787|ref|YP_006106585.1| DNA repair system specific for alkylated DNA [Escherichia coli ABU
83972]
gi|432412426|ref|ZP_19655089.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE39]
gi|432432501|ref|ZP_19674930.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE187]
gi|432436939|ref|ZP_19679327.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE188]
gi|432441709|ref|ZP_19684049.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE189]
gi|432446823|ref|ZP_19689122.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE191]
gi|432457321|ref|ZP_19699505.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE201]
gi|432496322|ref|ZP_19738118.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE214]
gi|432505060|ref|ZP_19746784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE220]
gi|432524411|ref|ZP_19761539.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE230]
gi|432569293|ref|ZP_19805805.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE53]
gi|432593479|ref|ZP_19829796.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE60]
gi|432608100|ref|ZP_19844285.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE67]
gi|432651786|ref|ZP_19887540.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE87]
gi|432784179|ref|ZP_20018358.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE63]
gi|432845183|ref|ZP_20078016.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE141]
gi|432974361|ref|ZP_20163200.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE209]
gi|432995949|ref|ZP_20184554.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE218]
gi|433000536|ref|ZP_20189061.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE223]
gi|433014478|ref|ZP_20202826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE104]
gi|433024096|ref|ZP_20212084.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE106]
gi|433058732|ref|ZP_20245778.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE124]
gi|433087893|ref|ZP_20274264.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE137]
gi|433116147|ref|ZP_20301938.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE153]
gi|433125815|ref|ZP_20311374.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE160]
gi|433139884|ref|ZP_20325140.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE167]
gi|433149801|ref|ZP_20334822.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE174]
gi|433208387|ref|ZP_20392061.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE97]
gi|433213124|ref|ZP_20396714.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE99]
gi|433323686|ref|ZP_20401017.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
J96]
gi|442607990|ref|ZP_21022750.1| Alkylated DNA repair protein AlkB [Escherichia coli Nissle 1917]
gi|26109004|gb|AAN81207.1|AE016763_166 Alkylated DNA repair protein alkB [Escherichia coli CFT073]
gi|218427939|emb|CAR08859.2| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli ED1a]
gi|227835620|gb|EEJ46086.1| alkylated DNA repair protein AlkB [Escherichia coli 83972]
gi|300299228|gb|EFJ55613.1| alkylated DNA repair protein AlkB [Escherichia coli MS 185-1]
gi|300408623|gb|EFJ92161.1| alkylated DNA repair protein AlkB [Escherichia coli MS 45-1]
gi|307554279|gb|ADN47054.1| DNA repair system specific for alkylated DNA [Escherichia coli ABU
83972]
gi|355420908|gb|AER85105.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i2']
gi|355425828|gb|AER90024.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i14']
gi|430934833|gb|ELC55180.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE39]
gi|430952926|gb|ELC71840.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE187]
gi|430962270|gb|ELC80127.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE188]
gi|430966163|gb|ELC83571.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE189]
gi|430973096|gb|ELC90064.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE191]
gi|430982055|gb|ELC98774.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE201]
gi|431023580|gb|ELD36775.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE214]
gi|431038154|gb|ELD49123.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE220]
gi|431051527|gb|ELD61190.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE230]
gi|431100007|gb|ELE05023.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE53]
gi|431127579|gb|ELE29879.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE60]
gi|431137986|gb|ELE39826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE67]
gi|431190233|gb|ELE89633.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE87]
gi|431328602|gb|ELG15906.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE63]
gi|431394605|gb|ELG78138.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE141]
gi|431489222|gb|ELH68850.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE209]
gi|431505509|gb|ELH84115.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE218]
gi|431508522|gb|ELH86794.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE223]
gi|431530576|gb|ELI07255.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE104]
gi|431535789|gb|ELI12128.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE106]
gi|431568987|gb|ELI41949.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE124]
gi|431604404|gb|ELI73813.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE137]
gi|431633909|gb|ELJ02171.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE153]
gi|431645049|gb|ELJ12702.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE160]
gi|431660197|gb|ELJ27085.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE167]
gi|431670470|gb|ELJ36823.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE174]
gi|431729672|gb|ELJ93291.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE97]
gi|431734149|gb|ELJ97550.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE99]
gi|432347784|gb|ELL42241.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
J96]
gi|441710595|emb|CCQ08727.1| Alkylated DNA repair protein AlkB [Escherichia coli Nissle 1917]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|15802765|ref|NP_288792.1| DNA repair system specific for alkylated DNA [Escherichia coli
O157:H7 str. EDL933]
gi|15832355|ref|NP_311128.1| alkylated DNA repair protein [Escherichia coli O157:H7 str. Sakai]
gi|168749619|ref|ZP_02774641.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4113]
gi|168754963|ref|ZP_02779970.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4401]
gi|168764708|ref|ZP_02789715.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4501]
gi|168767836|ref|ZP_02792843.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4486]
gi|168773065|ref|ZP_02798072.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4196]
gi|168780065|ref|ZP_02805072.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4076]
gi|168787122|ref|ZP_02812129.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC869]
gi|195935593|ref|ZP_03080975.1| alkylated DNA repair protein [Escherichia coli O157:H7 str. EC4024]
gi|208807664|ref|ZP_03250001.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4206]
gi|208812377|ref|ZP_03253706.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4045]
gi|208821524|ref|ZP_03261844.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4042]
gi|209398419|ref|YP_002271625.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4115]
gi|217327520|ref|ZP_03443603.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
TW14588]
gi|254794111|ref|YP_003078948.1| N1-methyladenine or N3-methylcytosine DNA lesion oxidative
demethylase [Escherichia coli O157:H7 str. TW14359]
gi|261223329|ref|ZP_05937610.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O157:H7 str. FRIK2000]
gi|261259121|ref|ZP_05951654.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O157:H7 str. FRIK966]
gi|291283463|ref|YP_003500281.1| alkylated DNA repair protein [Escherichia coli O55:H7 str. CB9615]
gi|387507601|ref|YP_006159857.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. RM12579]
gi|387883432|ref|YP_006313734.1| alkylated DNA repair protein [Escherichia coli Xuzhou21]
gi|416286551|ref|ZP_11648450.1| Alkylated DNA repair protein AlkB [Shigella boydii ATCC 9905]
gi|416310887|ref|ZP_11656622.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1044]
gi|416318215|ref|ZP_11660925.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC1212]
gi|416330556|ref|ZP_11669506.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1125]
gi|416775446|ref|ZP_11874336.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. G5101]
gi|416787151|ref|ZP_11879247.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. 493-89]
gi|416798746|ref|ZP_11884164.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. H 2687]
gi|416809162|ref|ZP_11888849.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. 3256-97]
gi|416819684|ref|ZP_11893406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. USDA 5905]
gi|416830554|ref|ZP_11898694.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. LSU-61]
gi|417688614|ref|ZP_12337855.1| alkylated DNA repair protein AlkB [Shigella boydii 5216-82]
gi|419046496|ref|ZP_13593433.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3A]
gi|419051929|ref|ZP_13598801.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3B]
gi|419057960|ref|ZP_13604765.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3C]
gi|419070325|ref|ZP_13615948.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3E]
gi|419076464|ref|ZP_13621982.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3F]
gi|419081418|ref|ZP_13626866.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4A]
gi|419087192|ref|ZP_13632549.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4B]
gi|419099084|ref|ZP_13644283.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4D]
gi|419104779|ref|ZP_13649908.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4E]
gi|419110237|ref|ZP_13655295.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4F]
gi|419115547|ref|ZP_13660565.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5A]
gi|419121178|ref|ZP_13666135.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5B]
gi|419126870|ref|ZP_13671755.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5C]
gi|419137264|ref|ZP_13682060.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5E]
gi|420270337|ref|ZP_14772695.1| alkylated DNA repair protein AlkB [Escherichia coli PA22]
gi|420276232|ref|ZP_14778516.1| alkylated DNA repair protein AlkB [Escherichia coli PA40]
gi|420281451|ref|ZP_14783689.1| alkylated DNA repair protein AlkB [Escherichia coli TW06591]
gi|420287378|ref|ZP_14789569.1| alkylated DNA repair protein AlkB [Escherichia coli TW10246]
gi|420293170|ref|ZP_14795293.1| alkylated DNA repair protein AlkB [Escherichia coli TW11039]
gi|420299044|ref|ZP_14801093.1| alkylated DNA repair protein AlkB [Escherichia coli TW09109]
gi|420304905|ref|ZP_14806901.1| alkylated DNA repair protein AlkB [Escherichia coli TW10119]
gi|420310659|ref|ZP_14812592.1| alkylated DNA repair protein AlkB [Escherichia coli EC1738]
gi|420315857|ref|ZP_14817733.1| alkylated DNA repair protein AlkB [Escherichia coli EC1734]
gi|421819023|ref|ZP_16254521.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0821]
gi|421824847|ref|ZP_16260214.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK920]
gi|421831748|ref|ZP_16267035.1| alkylated DNA repair protein AlkB [Escherichia coli PA7]
gi|422834622|ref|ZP_16882683.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
E101]
gi|423725808|ref|ZP_17699918.1| alkylated DNA repair protein AlkB [Escherichia coli PA31]
gi|424078247|ref|ZP_17815251.1| alkylated DNA repair protein AlkB [Escherichia coli FDA505]
gi|424084703|ref|ZP_17821213.1| alkylated DNA repair protein AlkB [Escherichia coli FDA517]
gi|424097761|ref|ZP_17833098.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1985]
gi|424103962|ref|ZP_17838761.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1990]
gi|424110665|ref|ZP_17844923.1| alkylated DNA repair protein AlkB [Escherichia coli 93-001]
gi|424116554|ref|ZP_17850418.1| alkylated DNA repair protein AlkB [Escherichia coli PA3]
gi|424122768|ref|ZP_17856116.1| alkylated DNA repair protein AlkB [Escherichia coli PA5]
gi|424128906|ref|ZP_17861830.1| alkylated DNA repair protein AlkB [Escherichia coli PA9]
gi|424135160|ref|ZP_17867646.1| alkylated DNA repair protein AlkB [Escherichia coli PA10]
gi|424141761|ref|ZP_17873674.1| alkylated DNA repair protein AlkB [Escherichia coli PA14]
gi|424148191|ref|ZP_17879589.1| alkylated DNA repair protein AlkB [Escherichia coli PA15]
gi|424154066|ref|ZP_17885042.1| alkylated DNA repair protein AlkB [Escherichia coli PA24]
gi|424247891|ref|ZP_17890526.1| alkylated DNA repair protein AlkB [Escherichia coli PA25]
gi|424324426|ref|ZP_17896447.1| alkylated DNA repair protein AlkB [Escherichia coli PA28]
gi|424450451|ref|ZP_17902176.1| alkylated DNA repair protein AlkB [Escherichia coli PA32]
gi|424456647|ref|ZP_17907809.1| alkylated DNA repair protein AlkB [Escherichia coli PA33]
gi|424463033|ref|ZP_17913513.1| alkylated DNA repair protein AlkB [Escherichia coli PA39]
gi|424469399|ref|ZP_17919245.1| alkylated DNA repair protein AlkB [Escherichia coli PA41]
gi|424475938|ref|ZP_17925281.1| alkylated DNA repair protein AlkB [Escherichia coli PA42]
gi|424481690|ref|ZP_17930689.1| alkylated DNA repair protein AlkB [Escherichia coli TW07945]
gi|424487838|ref|ZP_17936426.1| alkylated DNA repair protein AlkB [Escherichia coli TW09098]
gi|424494428|ref|ZP_17942202.1| alkylated DNA repair protein AlkB [Escherichia coli TW09195]
gi|424501208|ref|ZP_17948132.1| alkylated DNA repair protein AlkB [Escherichia coli EC4203]
gi|424507441|ref|ZP_17953871.1| alkylated DNA repair protein AlkB [Escherichia coli EC4196]
gi|424514764|ref|ZP_17959481.1| alkylated DNA repair protein AlkB [Escherichia coli TW14313]
gi|424521087|ref|ZP_17965230.1| alkylated DNA repair protein AlkB [Escherichia coli TW14301]
gi|424526922|ref|ZP_17970656.1| alkylated DNA repair protein AlkB [Escherichia coli EC4421]
gi|424533082|ref|ZP_17976447.1| alkylated DNA repair protein AlkB [Escherichia coli EC4422]
gi|424539147|ref|ZP_17982116.1| alkylated DNA repair protein AlkB [Escherichia coli EC4013]
gi|424545166|ref|ZP_17987615.1| alkylated DNA repair protein AlkB [Escherichia coli EC4402]
gi|424551421|ref|ZP_17993305.1| alkylated DNA repair protein AlkB [Escherichia coli EC4439]
gi|424557608|ref|ZP_17999045.1| alkylated DNA repair protein AlkB [Escherichia coli EC4436]
gi|424563954|ref|ZP_18004974.1| alkylated DNA repair protein AlkB [Escherichia coli EC4437]
gi|424570079|ref|ZP_18010664.1| alkylated DNA repair protein AlkB [Escherichia coli EC4448]
gi|424576243|ref|ZP_18016346.1| alkylated DNA repair protein AlkB [Escherichia coli EC1845]
gi|424582086|ref|ZP_18021755.1| alkylated DNA repair protein AlkB [Escherichia coli EC1863]
gi|425098806|ref|ZP_18501558.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4870]
gi|425104935|ref|ZP_18507264.1| alkylated DNA repair protein AlkB [Escherichia coli 5.2239]
gi|425110855|ref|ZP_18512790.1| alkylated DNA repair protein AlkB [Escherichia coli 6.0172]
gi|425126794|ref|ZP_18527990.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0586]
gi|425132551|ref|ZP_18533415.1| alkylated DNA repair protein AlkB [Escherichia coli 8.2524]
gi|425139020|ref|ZP_18539426.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0833]
gi|425144883|ref|ZP_18544892.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0869]
gi|425150927|ref|ZP_18550561.1| alkylated DNA repair protein AlkB [Escherichia coli 88.0221]
gi|425156808|ref|ZP_18556089.1| alkylated DNA repair protein AlkB [Escherichia coli PA34]
gi|425163248|ref|ZP_18562143.1| alkylated DNA repair protein AlkB [Escherichia coli FDA506]
gi|425168913|ref|ZP_18567412.1| alkylated DNA repair protein AlkB [Escherichia coli FDA507]
gi|425175047|ref|ZP_18573177.1| alkylated DNA repair protein AlkB [Escherichia coli FDA504]
gi|425181078|ref|ZP_18578784.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1999]
gi|425187343|ref|ZP_18584626.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1997]
gi|425194112|ref|ZP_18590895.1| alkylated DNA repair protein AlkB [Escherichia coli NE1487]
gi|425200547|ref|ZP_18596777.1| alkylated DNA repair protein AlkB [Escherichia coli NE037]
gi|425206970|ref|ZP_18602782.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK2001]
gi|425212661|ref|ZP_18608082.1| alkylated DNA repair protein AlkB [Escherichia coli PA4]
gi|425218776|ref|ZP_18613767.1| alkylated DNA repair protein AlkB [Escherichia coli PA23]
gi|425225304|ref|ZP_18619805.1| alkylated DNA repair protein AlkB [Escherichia coli PA49]
gi|425231668|ref|ZP_18625717.1| alkylated DNA repair protein AlkB [Escherichia coli PA45]
gi|425237585|ref|ZP_18631315.1| alkylated DNA repair protein AlkB [Escherichia coli TT12B]
gi|425243804|ref|ZP_18637124.1| alkylated DNA repair protein AlkB [Escherichia coli MA6]
gi|425249926|ref|ZP_18642877.1| alkylated DNA repair protein AlkB [Escherichia coli 5905]
gi|425255786|ref|ZP_18648321.1| alkylated DNA repair protein AlkB [Escherichia coli CB7326]
gi|425262004|ref|ZP_18654034.1| alkylated DNA repair protein AlkB [Escherichia coli EC96038]
gi|425268040|ref|ZP_18659684.1| alkylated DNA repair protein AlkB [Escherichia coli 5412]
gi|425295474|ref|ZP_18685694.1| alkylated DNA repair protein AlkB [Escherichia coli PA38]
gi|425312144|ref|ZP_18701346.1| alkylated DNA repair protein AlkB [Escherichia coli EC1735]
gi|425318091|ref|ZP_18706901.1| alkylated DNA repair protein AlkB [Escherichia coli EC1736]
gi|425324192|ref|ZP_18712582.1| alkylated DNA repair protein AlkB [Escherichia coli EC1737]
gi|425330475|ref|ZP_18718364.1| alkylated DNA repair protein AlkB [Escherichia coli EC1846]
gi|425336639|ref|ZP_18724046.1| alkylated DNA repair protein AlkB [Escherichia coli EC1847]
gi|425343047|ref|ZP_18729964.1| alkylated DNA repair protein AlkB [Escherichia coli EC1848]
gi|425348848|ref|ZP_18735347.1| alkylated DNA repair protein AlkB [Escherichia coli EC1849]
gi|425355144|ref|ZP_18741234.1| alkylated DNA repair protein AlkB [Escherichia coli EC1850]
gi|425361104|ref|ZP_18746777.1| alkylated DNA repair protein AlkB [Escherichia coli EC1856]
gi|425367274|ref|ZP_18752472.1| alkylated DNA repair protein AlkB [Escherichia coli EC1862]
gi|425373650|ref|ZP_18758316.1| alkylated DNA repair protein AlkB [Escherichia coli EC1864]
gi|425386497|ref|ZP_18770077.1| alkylated DNA repair protein AlkB [Escherichia coli EC1866]
gi|425393219|ref|ZP_18776349.1| alkylated DNA repair protein AlkB [Escherichia coli EC1868]
gi|425399317|ref|ZP_18782047.1| alkylated DNA repair protein AlkB [Escherichia coli EC1869]
gi|425405396|ref|ZP_18787652.1| alkylated DNA repair protein AlkB [Escherichia coli EC1870]
gi|425411800|ref|ZP_18793591.1| alkylated DNA repair protein AlkB [Escherichia coli NE098]
gi|425418131|ref|ZP_18799425.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK523]
gi|425429460|ref|ZP_18810086.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1304]
gi|428947831|ref|ZP_19020137.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1467]
gi|428953931|ref|ZP_19025746.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1042]
gi|428959868|ref|ZP_19031202.1| alkylated DNA repair protein AlkB [Escherichia coli 89.0511]
gi|428966437|ref|ZP_19037215.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0091]
gi|428972322|ref|ZP_19042684.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0039]
gi|428978823|ref|ZP_19048666.1| alkylated DNA repair protein AlkB [Escherichia coli 90.2281]
gi|428984442|ref|ZP_19053854.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0055]
gi|428990690|ref|ZP_19059697.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0056]
gi|428996490|ref|ZP_19065119.1| alkylated DNA repair protein AlkB [Escherichia coli 94.0618]
gi|429002730|ref|ZP_19070891.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0183]
gi|429008871|ref|ZP_19076415.1| alkylated DNA repair protein AlkB [Escherichia coli 95.1288]
gi|429015316|ref|ZP_19082237.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0943]
gi|429021266|ref|ZP_19087805.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0428]
gi|429027279|ref|ZP_19093312.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0427]
gi|429033487|ref|ZP_19099029.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0939]
gi|429039586|ref|ZP_19104719.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0932]
gi|429045446|ref|ZP_19110177.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0107]
gi|429050885|ref|ZP_19115463.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0003]
gi|429056218|ref|ZP_19120568.1| alkylated DNA repair protein AlkB [Escherichia coli 97.1742]
gi|429061762|ref|ZP_19125801.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0007]
gi|429068067|ref|ZP_19131551.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0672]
gi|429073970|ref|ZP_19137234.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0678]
gi|429079167|ref|ZP_19142314.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0713]
gi|429827170|ref|ZP_19358248.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0109]
gi|429833498|ref|ZP_19363895.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0010]
gi|432392725|ref|ZP_19635555.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE21]
gi|432450375|ref|ZP_19692640.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE193]
gi|432815965|ref|ZP_20049749.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE115]
gi|432948092|ref|ZP_20143248.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE196]
gi|433034054|ref|ZP_20221770.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE112]
gi|433043796|ref|ZP_20231291.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE117]
gi|444925756|ref|ZP_21245072.1| alkylated DNA repair protein AlkB [Escherichia coli 09BKT078844]
gi|444931461|ref|ZP_21250518.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0814]
gi|444936870|ref|ZP_21255665.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0815]
gi|444942497|ref|ZP_21261033.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0816]
gi|444953568|ref|ZP_21271679.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0848]
gi|444959058|ref|ZP_21276927.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1753]
gi|444966774|ref|ZP_21284289.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1775]
gi|444970190|ref|ZP_21287566.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1793]
gi|444975449|ref|ZP_21292595.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1805]
gi|444980922|ref|ZP_21297841.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 700728]
gi|444986272|ref|ZP_21303065.1| alkylated DNA repair protein AlkB [Escherichia coli PA11]
gi|444991586|ref|ZP_21308242.1| alkylated DNA repair protein AlkB [Escherichia coli PA19]
gi|444996879|ref|ZP_21313390.1| alkylated DNA repair protein AlkB [Escherichia coli PA13]
gi|445002435|ref|ZP_21318835.1| alkylated DNA repair protein AlkB [Escherichia coli PA2]
gi|445007935|ref|ZP_21324188.1| alkylated DNA repair protein AlkB [Escherichia coli PA47]
gi|445012967|ref|ZP_21329085.1| alkylated DNA repair protein AlkB [Escherichia coli PA48]
gi|445018845|ref|ZP_21334821.1| alkylated DNA repair protein AlkB [Escherichia coli PA8]
gi|445024352|ref|ZP_21340187.1| alkylated DNA repair protein AlkB [Escherichia coli 7.1982]
gi|445029627|ref|ZP_21345315.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1781]
gi|445035088|ref|ZP_21350630.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1762]
gi|445040714|ref|ZP_21356103.1| alkylated DNA repair protein AlkB [Escherichia coli PA35]
gi|445045910|ref|ZP_21361174.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4880]
gi|445051483|ref|ZP_21366547.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0083]
gi|445057243|ref|ZP_21372113.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0670]
gi|452971965|ref|ZP_21970192.1| alpha-ketoglutarate-dependent dioxygenase [Escherichia coli O157:H7
str. EC4009]
gi|12516547|gb|AAG57347.1|AE005453_4 DNA repair system specific for alkylated DNA [Escherichia coli
O157:H7 str. EDL933]
gi|13362570|dbj|BAB36524.1| alkylated DNA repair protein [Escherichia coli O157:H7 str. Sakai]
gi|187771131|gb|EDU34975.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4196]
gi|188016117|gb|EDU54239.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4113]
gi|189002134|gb|EDU71120.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4076]
gi|189357628|gb|EDU76047.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4401]
gi|189362800|gb|EDU81219.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4486]
gi|189365342|gb|EDU83758.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4501]
gi|189372948|gb|EDU91364.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC869]
gi|208727465|gb|EDZ77066.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4206]
gi|208733654|gb|EDZ82341.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4045]
gi|208741647|gb|EDZ89329.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4042]
gi|209159819|gb|ACI37252.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4115]
gi|209765658|gb|ACI81141.1| alkylated DNA repair protein [Escherichia coli]
gi|209765660|gb|ACI81142.1| alkylated DNA repair protein [Escherichia coli]
gi|209765662|gb|ACI81143.1| alkylated DNA repair protein [Escherichia coli]
gi|209765664|gb|ACI81144.1| alkylated DNA repair protein [Escherichia coli]
gi|209765666|gb|ACI81145.1| alkylated DNA repair protein [Escherichia coli]
gi|217319887|gb|EEC28312.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
TW14588]
gi|254593511|gb|ACT72872.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O157:H7 str. TW14359]
gi|290763336|gb|ADD57297.1| alkylated DNA repair protein [Escherichia coli O55:H7 str. CB9615]
gi|320178816|gb|EFW53779.1| Alkylated DNA repair protein AlkB [Shigella boydii ATCC 9905]
gi|320192162|gb|EFW66807.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC1212]
gi|320641281|gb|EFX10759.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. G5101]
gi|320646554|gb|EFX15470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. 493-89]
gi|320651925|gb|EFX20300.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. H 2687]
gi|320657650|gb|EFX25448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320663106|gb|EFX30419.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. USDA 5905]
gi|320668006|gb|EFX34909.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. LSU-61]
gi|326339565|gb|EGD63376.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1125]
gi|326344026|gb|EGD67787.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1044]
gi|332093161|gb|EGI98221.1| alkylated DNA repair protein AlkB [Shigella boydii 5216-82]
gi|371601414|gb|EHN90164.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
E101]
gi|374359595|gb|AEZ41302.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. RM12579]
gi|377893326|gb|EHU57765.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3A]
gi|377893614|gb|EHU58048.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3B]
gi|377904547|gb|EHU68825.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3C]
gi|377912155|gb|EHU76318.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3E]
gi|377921505|gb|EHU85504.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3F]
gi|377926048|gb|EHU89983.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4A]
gi|377930382|gb|EHU94265.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4B]
gi|377942194|gb|EHV05930.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4D]
gi|377947262|gb|EHV10929.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4E]
gi|377957119|gb|EHV20655.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4F]
gi|377960497|gb|EHV23978.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5A]
gi|377966899|gb|EHV30308.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5B]
gi|377974982|gb|EHV38307.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5C]
gi|377984257|gb|EHV47492.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5E]
gi|386796890|gb|AFJ29924.1| alkylated DNA repair protein [Escherichia coli Xuzhou21]
gi|390643184|gb|EIN22547.1| alkylated DNA repair protein AlkB [Escherichia coli FDA517]
gi|390644213|gb|EIN23506.1| alkylated DNA repair protein AlkB [Escherichia coli FDA505]
gi|390660880|gb|EIN38570.1| alkylated DNA repair protein AlkB [Escherichia coli 93-001]
gi|390662392|gb|EIN39996.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1985]
gi|390664184|gb|EIN41646.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1990]
gi|390677986|gb|EIN53986.1| alkylated DNA repair protein AlkB [Escherichia coli PA3]
gi|390681198|gb|EIN57002.1| alkylated DNA repair protein AlkB [Escherichia coli PA5]
gi|390683886|gb|EIN59538.1| alkylated DNA repair protein AlkB [Escherichia coli PA9]
gi|390697108|gb|EIN71542.1| alkylated DNA repair protein AlkB [Escherichia coli PA10]
gi|390701154|gb|EIN75409.1| alkylated DNA repair protein AlkB [Escherichia coli PA15]
gi|390701862|gb|EIN76080.1| alkylated DNA repair protein AlkB [Escherichia coli PA14]
gi|390713849|gb|EIN86763.1| alkylated DNA repair protein AlkB [Escherichia coli PA22]
gi|390723152|gb|EIN95772.1| alkylated DNA repair protein AlkB [Escherichia coli PA25]
gi|390724698|gb|EIN97247.1| alkylated DNA repair protein AlkB [Escherichia coli PA24]
gi|390727869|gb|EIO00252.1| alkylated DNA repair protein AlkB [Escherichia coli PA28]
gi|390743093|gb|EIO14080.1| alkylated DNA repair protein AlkB [Escherichia coli PA31]
gi|390743317|gb|EIO14294.1| alkylated DNA repair protein AlkB [Escherichia coli PA32]
gi|390745900|gb|EIO16680.1| alkylated DNA repair protein AlkB [Escherichia coli PA33]
gi|390757642|gb|EIO27112.1| alkylated DNA repair protein AlkB [Escherichia coli PA40]
gi|390767845|gb|EIO36911.1| alkylated DNA repair protein AlkB [Escherichia coli PA41]
gi|390769180|gb|EIO38132.1| alkylated DNA repair protein AlkB [Escherichia coli PA39]
gi|390769571|gb|EIO38498.1| alkylated DNA repair protein AlkB [Escherichia coli PA42]
gi|390781738|gb|EIO49415.1| alkylated DNA repair protein AlkB [Escherichia coli TW06591]
gi|390790135|gb|EIO57563.1| alkylated DNA repair protein AlkB [Escherichia coli TW10246]
gi|390791327|gb|EIO58718.1| alkylated DNA repair protein AlkB [Escherichia coli TW07945]
gi|390797256|gb|EIO64512.1| alkylated DNA repair protein AlkB [Escherichia coli TW11039]
gi|390806564|gb|EIO73467.1| alkylated DNA repair protein AlkB [Escherichia coli TW09098]
gi|390806739|gb|EIO73641.1| alkylated DNA repair protein AlkB [Escherichia coli TW09109]
gi|390815927|gb|EIO82439.1| alkylated DNA repair protein AlkB [Escherichia coli TW10119]
gi|390826228|gb|EIO92084.1| alkylated DNA repair protein AlkB [Escherichia coli EC4203]
gi|390830788|gb|EIO96282.1| alkylated DNA repair protein AlkB [Escherichia coli TW09195]
gi|390831758|gb|EIO97126.1| alkylated DNA repair protein AlkB [Escherichia coli EC4196]
gi|390846231|gb|EIP09835.1| alkylated DNA repair protein AlkB [Escherichia coli TW14301]
gi|390847443|gb|EIP10985.1| alkylated DNA repair protein AlkB [Escherichia coli TW14313]
gi|390850909|gb|EIP14250.1| alkylated DNA repair protein AlkB [Escherichia coli EC4421]
gi|390861688|gb|EIP23932.1| alkylated DNA repair protein AlkB [Escherichia coli EC4422]
gi|390865890|gb|EIP27884.1| alkylated DNA repair protein AlkB [Escherichia coli EC4013]
gi|390871126|gb|EIP32568.1| alkylated DNA repair protein AlkB [Escherichia coli EC4402]
gi|390878945|gb|EIP39755.1| alkylated DNA repair protein AlkB [Escherichia coli EC4439]
gi|390883965|gb|EIP44354.1| alkylated DNA repair protein AlkB [Escherichia coli EC4436]
gi|390893972|gb|EIP53506.1| alkylated DNA repair protein AlkB [Escherichia coli EC4437]
gi|390896242|gb|EIP55633.1| alkylated DNA repair protein AlkB [Escherichia coli EC4448]
gi|390899938|gb|EIP59174.1| alkylated DNA repair protein AlkB [Escherichia coli EC1738]
gi|390907847|gb|EIP66688.1| alkylated DNA repair protein AlkB [Escherichia coli EC1734]
gi|390919591|gb|EIP77940.1| alkylated DNA repair protein AlkB [Escherichia coli EC1863]
gi|390920560|gb|EIP78828.1| alkylated DNA repair protein AlkB [Escherichia coli EC1845]
gi|408064120|gb|EKG98602.1| alkylated DNA repair protein AlkB [Escherichia coli PA7]
gi|408067899|gb|EKH02327.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK920]
gi|408071192|gb|EKH05545.1| alkylated DNA repair protein AlkB [Escherichia coli PA34]
gi|408078836|gb|EKH12964.1| alkylated DNA repair protein AlkB [Escherichia coli FDA506]
gi|408083145|gb|EKH17063.1| alkylated DNA repair protein AlkB [Escherichia coli FDA507]
gi|408091405|gb|EKH24636.1| alkylated DNA repair protein AlkB [Escherichia coli FDA504]
gi|408097518|gb|EKH30409.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1999]
gi|408104225|gb|EKH36547.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1997]
gi|408108453|gb|EKH40456.1| alkylated DNA repair protein AlkB [Escherichia coli NE1487]
gi|408115240|gb|EKH46706.1| alkylated DNA repair protein AlkB [Escherichia coli NE037]
gi|408121287|gb|EKH52248.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK2001]
gi|408127767|gb|EKH58204.1| alkylated DNA repair protein AlkB [Escherichia coli PA4]
gi|408138797|gb|EKH68453.1| alkylated DNA repair protein AlkB [Escherichia coli PA23]
gi|408140450|gb|EKH69966.1| alkylated DNA repair protein AlkB [Escherichia coli PA49]
gi|408146069|gb|EKH75212.1| alkylated DNA repair protein AlkB [Escherichia coli PA45]
gi|408155426|gb|EKH83749.1| alkylated DNA repair protein AlkB [Escherichia coli TT12B]
gi|408160083|gb|EKH88127.1| alkylated DNA repair protein AlkB [Escherichia coli MA6]
gi|408164093|gb|EKH91933.1| alkylated DNA repair protein AlkB [Escherichia coli 5905]
gi|408173559|gb|EKI00579.1| alkylated DNA repair protein AlkB [Escherichia coli CB7326]
gi|408180671|gb|EKI07276.1| alkylated DNA repair protein AlkB [Escherichia coli EC96038]
gi|408183101|gb|EKI09575.1| alkylated DNA repair protein AlkB [Escherichia coli 5412]
gi|408218032|gb|EKI42266.1| alkylated DNA repair protein AlkB [Escherichia coli PA38]
gi|408227605|gb|EKI51187.1| alkylated DNA repair protein AlkB [Escherichia coli EC1735]
gi|408238659|gb|EKI61445.1| alkylated DNA repair protein AlkB [Escherichia coli EC1736]
gi|408243161|gb|EKI65705.1| alkylated DNA repair protein AlkB [Escherichia coli EC1737]
gi|408247537|gb|EKI69737.1| alkylated DNA repair protein AlkB [Escherichia coli EC1846]
gi|408256620|gb|EKI77995.1| alkylated DNA repair protein AlkB [Escherichia coli EC1847]
gi|408259322|gb|EKI80509.1| alkylated DNA repair protein AlkB [Escherichia coli EC1848]
gi|408265715|gb|EKI86397.1| alkylated DNA repair protein AlkB [Escherichia coli EC1849]
gi|408275007|gb|EKI94989.1| alkylated DNA repair protein AlkB [Escherichia coli EC1850]
gi|408277300|gb|EKI97110.1| alkylated DNA repair protein AlkB [Escherichia coli EC1856]
gi|408287134|gb|EKJ06030.1| alkylated DNA repair protein AlkB [Escherichia coli EC1862]
gi|408291303|gb|EKJ09937.1| alkylated DNA repair protein AlkB [Escherichia coli EC1864]
gi|408308340|gb|EKJ25610.1| alkylated DNA repair protein AlkB [Escherichia coli EC1868]
gi|408308504|gb|EKJ25773.1| alkylated DNA repair protein AlkB [Escherichia coli EC1866]
gi|408319512|gb|EKJ35648.1| alkylated DNA repair protein AlkB [Escherichia coli EC1869]
gi|408326105|gb|EKJ41934.1| alkylated DNA repair protein AlkB [Escherichia coli EC1870]
gi|408326948|gb|EKJ42717.1| alkylated DNA repair protein AlkB [Escherichia coli NE098]
gi|408336913|gb|EKJ51661.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK523]
gi|408346713|gb|EKJ60999.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1304]
gi|408550223|gb|EKK27568.1| alkylated DNA repair protein AlkB [Escherichia coli 5.2239]
gi|408550847|gb|EKK28163.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4870]
gi|408551105|gb|EKK28392.1| alkylated DNA repair protein AlkB [Escherichia coli 6.0172]
gi|408570319|gb|EKK46299.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0586]
gi|408579918|gb|EKK55366.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0833]
gi|408581556|gb|EKK56891.1| alkylated DNA repair protein AlkB [Escherichia coli 8.2524]
gi|408591604|gb|EKK66025.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0869]
gi|408596650|gb|EKK70775.1| alkylated DNA repair protein AlkB [Escherichia coli 88.0221]
gi|408612780|gb|EKK86114.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0821]
gi|427205080|gb|EKV75340.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1042]
gi|427207457|gb|EKV77626.1| alkylated DNA repair protein AlkB [Escherichia coli 89.0511]
gi|427208690|gb|EKV78779.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1467]
gi|427222254|gb|EKV91046.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0091]
gi|427224606|gb|EKV93311.1| alkylated DNA repair protein AlkB [Escherichia coli 90.2281]
gi|427228064|gb|EKV96548.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0039]
gi|427242318|gb|EKW09733.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0056]
gi|427242744|gb|EKW10141.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0055]
gi|427246471|gb|EKW13685.1| alkylated DNA repair protein AlkB [Escherichia coli 94.0618]
gi|427261728|gb|EKW27645.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0183]
gi|427262292|gb|EKW28193.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0943]
gi|427265049|gb|EKW30676.1| alkylated DNA repair protein AlkB [Escherichia coli 95.1288]
gi|427276828|gb|EKW41393.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0428]
gi|427279682|gb|EKW44093.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0427]
gi|427283449|gb|EKW47657.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0939]
gi|427292211|gb|EKW55567.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0932]
gi|427299538|gb|EKW62509.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0107]
gi|427300811|gb|EKW63736.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0003]
gi|427313481|gb|EKW75589.1| alkylated DNA repair protein AlkB [Escherichia coli 97.1742]
gi|427316048|gb|EKW78022.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0007]
gi|427319757|gb|EKW81560.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0672]
gi|427328576|gb|EKW89938.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0678]
gi|427329497|gb|EKW90823.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0713]
gi|429254244|gb|EKY38684.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0109]
gi|429255842|gb|EKY40126.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0010]
gi|430917881|gb|ELC38920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE21]
gi|430979765|gb|ELC96530.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE193]
gi|431364189|gb|ELG50733.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE115]
gi|431458070|gb|ELH38407.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE196]
gi|431551060|gb|ELI25047.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE112]
gi|431555634|gb|ELI29473.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE117]
gi|444538698|gb|ELV18545.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0814]
gi|444540188|gb|ELV19887.1| alkylated DNA repair protein AlkB [Escherichia coli 09BKT078844]
gi|444547848|gb|ELV26405.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0815]
gi|444558910|gb|ELV36171.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0816]
gi|444563882|gb|ELV40858.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0848]
gi|444569550|gb|ELV46132.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1775]
gi|444573577|gb|ELV49942.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1753]
gi|444579743|gb|ELV55720.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1793]
gi|444593717|gb|ELV68924.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 700728]
gi|444593977|gb|ELV69181.1| alkylated DNA repair protein AlkB [Escherichia coli PA11]
gi|444596226|gb|ELV71309.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1805]
gi|444607435|gb|ELV82013.1| alkylated DNA repair protein AlkB [Escherichia coli PA13]
gi|444607740|gb|ELV82308.1| alkylated DNA repair protein AlkB [Escherichia coli PA19]
gi|444616294|gb|ELV90462.1| alkylated DNA repair protein AlkB [Escherichia coli PA2]
gi|444624199|gb|ELV98104.1| alkylated DNA repair protein AlkB [Escherichia coli PA47]
gi|444624609|gb|ELV98491.1| alkylated DNA repair protein AlkB [Escherichia coli PA48]
gi|444630241|gb|ELW03906.1| alkylated DNA repair protein AlkB [Escherichia coli PA8]
gi|444639056|gb|ELW12377.1| alkylated DNA repair protein AlkB [Escherichia coli 7.1982]
gi|444641962|gb|ELW15178.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1781]
gi|444645592|gb|ELW18654.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1762]
gi|444654789|gb|ELW27436.1| alkylated DNA repair protein AlkB [Escherichia coli PA35]
gi|444660207|gb|ELW32580.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4880]
gi|444665084|gb|ELW37234.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0083]
gi|444669992|gb|ELW41926.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0670]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|398380806|ref|ZP_10538920.1| alkylated DNA repair protein [Rhizobium sp. AP16]
gi|397720237|gb|EJK80795.1| alkylated DNA repair protein [Rhizobium sp. AP16]
Length = 202
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY+ ++GLHQD+DE D PV+S S+G++ F G L
Sbjct: 101 PEACLVNFYNDDARMGLHQDRDEQ----DLAAPVLSISLGNTCLFRVGGLNRNDRTLSFK 156
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 157 LSSGDIVVLGGEGRLCFHGVDRIHPATS--TLLKSG----GRINLTLRR 199
>gi|255325789|ref|ZP_05366883.1| alkylated DNA repair protein [Corynebacterium tuberculostearicum
SK141]
gi|255297200|gb|EET76523.1| alkylated DNA repair protein [Corynebacterium tuberculostearicum
SK141]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 23/230 (10%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK 416
+ + ++ W G+ ++ +V+ I R+ P +P + G + + + LG+
Sbjct: 11 VRVAPGVGHVPEWVGVEKQKALVEEMRGIAREYAGTPMAMVRPRLKSGGQMSVFQLHLGR 70
Query: 417 NWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
W + +Y + DG P +P Q+ A++ + + ++E +
Sbjct: 71 YWHYPSYRYVDN--MDGTRVPPVPESLRQIAPGALRAAAEVA-------PELEPWVENFV 121
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKV 535
P++ + N+Y +G+H D E + PV+S SIGD A F G +
Sbjct: 122 PEMALVNYYPPGSAMGMHVDDSEESPA-----PVISLSIGDEALFRMGHTESRTRPWDDI 176
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++FGG R +HGV ++ T P E + GR+N+T RQ
Sbjct: 177 TLCSGDLVVFGGPKRFAYHGVVRVNDGTLP----EGCGLSEGRINITIRQ 222
>gi|398826512|ref|ZP_10584755.1| alkylated DNA repair protein [Bradyrhizobium sp. YR681]
gi|398221038|gb|EJN07468.1| alkylated DNA repair protein [Bradyrhizobium sp. YR681]
Length = 217
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y P GA P++P L A + +
Sbjct: 68 CGERGWITDHTGYRYDPIDPRTGAPWPVMPPVLRDLARSAAE----------------QG 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G +
Sbjct: 112 GFAGFAPDACLVNRYEPGTRLSLHQDKDE----LDYSAPIVSVSLGLPATFLFGGMARAD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 168 KPRRFRLVHGDVVVWGGASRLAYHGV-------APLAEGEHALLGRKRINLTFRR 215
>gi|429084549|ref|ZP_19147552.1| Alkylated DNA repair protein AlkB [Cronobacter condimenti 1330]
gi|426546439|emb|CCJ73593.1| Alkylated DNA repair protein AlkB [Cronobacter condimenti 1330]
Length = 214
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PDFTPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG SR +HG++ P E + R NLTFRQ
Sbjct: 166 KRLLLEHGDVVVWGGASRLFYHGIQ-------PLKGGEHPATGEYRFNLTFRQ 211
>gi|85712827|ref|ZP_01043870.1| Alkylated DNA repair protein [Idiomarina baltica OS145]
gi|85693378|gb|EAQ31333.1| Alkylated DNA repair protein [Idiomarina baltica OS145]
Length = 209
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P P+ C+ N Y K+GLHQD+DES D PVVS+S G A F++
Sbjct: 103 QAGYPEFLPNACLINVYKPGAKMGLHQDRDES----DLNEPVVSYSFGLPARFIWAGQTR 158
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ L GDVL++GG SR +HG++K+ T P L ++T R+NLT R+
Sbjct: 159 TGTKQRLPLNHGDVLVWGGPSRLNYHGIDKLVEGTHP--LTQQT-----RVNLTLRK 208
>gi|432481584|ref|ZP_19723541.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE210]
gi|431006956|gb|ELD21925.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE210]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|283832342|ref|ZP_06352083.1| alkylated DNA repair protein AlkB [Citrobacter youngae ATCC 29220]
gi|291071990|gb|EFE10099.1| alkylated DNA repair protein AlkB [Citrobacter youngae ATCC 29220]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P GA P +P F L +A + G D +
Sbjct: 67 LGWTTDQHGYLYSPFDPLSGAPWPPMPDAFADLCQQA---------ATAAGYADFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 114 ---PDACLINRYTPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GDV+++GG SR +HG++ + P + R NLTFRQ
Sbjct: 167 RLLLEHGDVVVWGGDSRLFYHGIQPLKTGYHPFT-------GDCRYNLTFRQ 211
>gi|417702955|ref|ZP_12352066.1| alkylated DNA repair protein AlkB [Shigella flexneri K-218]
gi|417744088|ref|ZP_12392614.1| alkylated DNA repair protein AlkB [Shigella flexneri 2930-71]
gi|332766029|gb|EGJ96239.1| alkylated DNA repair protein AlkB [Shigella flexneri 2930-71]
gi|333001815|gb|EGK21381.1| alkylated DNA repair protein AlkB [Shigella flexneri K-218]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|311741167|ref|ZP_07714992.1| alkylated DNA repair protein [Corynebacterium pseudogenitalium ATCC
33035]
gi|311303969|gb|EFQ80047.1| alkylated DNA repair protein [Corynebacterium pseudogenitalium ATCC
33035]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK 416
+ + ++ AW G+ ++ +V+ I R+ P +P + G + + + LG+
Sbjct: 11 VRVAPGVGHVPAWVGVDKQKALVEEMRGIAREYANTPMAMVRPRLKSGGQMSVFQLHLGR 70
Query: 417 NWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
W + +Y + +G P +P Q+ A++ + + ++E +
Sbjct: 71 YWHYPSYRYVDN--MEGTRVPPVPESLRQIAPGALRAAAEVA-------PELEPWVDTFV 121
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKV 535
P++ + N+Y +G+ D E + PV+S SIGD A F G +
Sbjct: 122 PEMALVNYYPPGSAMGMRVDDSEESPA-----PVISLSIGDEALFRMGHTEARTRPWDDI 176
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++FGG R +HGV ++ T P E +R GR+N+T RQ
Sbjct: 177 TLCSGDLVVFGGPKRFAYHGVVRVNDGTLP----EGCGLREGRINITIRQ 222
>gi|218705742|ref|YP_002413261.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli UMN026]
gi|293405679|ref|ZP_06649671.1| alkylated DNA repair protein AlkB [Escherichia coli FVEC1412]
gi|300897724|ref|ZP_07116120.1| alkylated DNA repair protein AlkB [Escherichia coli MS 198-1]
gi|417587228|ref|ZP_12237998.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_C165-02]
gi|419932855|ref|ZP_14450137.1| 2OG-Fe(II) oxygenase [Escherichia coli 576-1]
gi|432354151|ref|ZP_19597424.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE2]
gi|432402503|ref|ZP_19645255.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE26]
gi|432426767|ref|ZP_19669268.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE181]
gi|432461233|ref|ZP_19703382.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE204]
gi|432476440|ref|ZP_19718439.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE208]
gi|432489888|ref|ZP_19731762.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE213]
gi|432518282|ref|ZP_19755470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE228]
gi|432538403|ref|ZP_19775305.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE235]
gi|432631998|ref|ZP_19867924.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE80]
gi|432641712|ref|ZP_19877546.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE83]
gi|432666607|ref|ZP_19902188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE116]
gi|432775296|ref|ZP_20009575.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE54]
gi|432839896|ref|ZP_20073382.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE140]
gi|432887193|ref|ZP_20101267.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE158]
gi|432913391|ref|ZP_20119088.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE190]
gi|433019280|ref|ZP_20207501.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE105]
gi|433053820|ref|ZP_20241000.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE122]
gi|433068525|ref|ZP_20255315.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE128]
gi|433159254|ref|ZP_20344092.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE177]
gi|433179067|ref|ZP_20363467.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE82]
gi|433203829|ref|ZP_20387605.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE95]
gi|218432839|emb|CAR13733.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli UMN026]
gi|291427887|gb|EFF00914.1| alkylated DNA repair protein AlkB [Escherichia coli FVEC1412]
gi|300358540|gb|EFJ74410.1| alkylated DNA repair protein AlkB [Escherichia coli MS 198-1]
gi|345336364|gb|EGW68800.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_C165-02]
gi|388415431|gb|EIL75360.1| 2OG-Fe(II) oxygenase [Escherichia coli 576-1]
gi|430875324|gb|ELB98866.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE2]
gi|430924974|gb|ELC45647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE26]
gi|430955699|gb|ELC74481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE181]
gi|430988923|gb|ELD05392.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE204]
gi|431005608|gb|ELD20629.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE208]
gi|431020505|gb|ELD33850.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE213]
gi|431050904|gb|ELD60580.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE228]
gi|431069292|gb|ELD77621.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE235]
gi|431170198|gb|ELE70392.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE80]
gi|431181595|gb|ELE81457.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE83]
gi|431200901|gb|ELE99619.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE116]
gi|431318335|gb|ELG06101.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE54]
gi|431389069|gb|ELG72784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE140]
gi|431416191|gb|ELG98678.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE158]
gi|431439691|gb|ELH21024.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE190]
gi|431531181|gb|ELI07850.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE105]
gi|431570220|gb|ELI43146.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE122]
gi|431584152|gb|ELI56139.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE128]
gi|431677893|gb|ELJ43906.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE177]
gi|431701432|gb|ELJ66351.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE82]
gi|431721378|gb|ELJ85373.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE95]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|347541362|ref|YP_004848788.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania sp. NH8B]
gi|345644541|dbj|BAK78374.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania sp. NH8B]
Length = 215
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P PD C+ N Y +L LHQDKDE D+ P+VS S+G A FL+G LR
Sbjct: 108 EAGFPGYEPDACLINRYVPGSRLSLHQDKDER----DQIAPIVSVSLGLPALFLFGGLRR 163
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ L GDV+++GG +R +HGV + P LL E R+NLTFR+
Sbjct: 164 EDKTQRIPLAHGDVVVWGGPARLRYHGVLPLKEGVHP--LLGEQ-----RINLTFRK 213
>gi|121606979|ref|YP_984308.1| 2OG-Fe(II) oxygenase [Polaromonas naphthalenivorans CJ2]
gi|120595948|gb|ABM39387.1| DNA-N1-methyladenine dioxygenase [Polaromonas naphthalenivorans
CJ2]
Length = 217
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R EA +PD C+ N Y +L LHQD+DES D P+VS S+G A FL+G
Sbjct: 106 RAAAEAGFEGFAPDACLINRYEPGARLSLHQDRDES----DLSAPIVSVSLGLPAVFLFG 161
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+ ++ L GDV ++GG +R FHGV AP + + + R R+NLTFR
Sbjct: 162 GLQRNERPARLRLAHGDVAVWGGAARLAFHGV-------APLADGDHPRLGRQRINLTFR 214
Query: 585 Q 585
+
Sbjct: 215 R 215
>gi|170019474|ref|YP_001724428.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 8739]
gi|187731684|ref|YP_001879442.1| alkylated DNA repair protein AlkB [Shigella boydii CDC 3083-94]
gi|188495617|ref|ZP_03002887.1| alkylated DNA repair protein AlkB [Escherichia coli 53638]
gi|301022448|ref|ZP_07186328.1| alkylated DNA repair protein AlkB [Escherichia coli MS 69-1]
gi|386705471|ref|YP_006169318.1| Alkylated DNA repair protein AlkB [Escherichia coli P12b]
gi|417231309|ref|ZP_12032707.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0959]
gi|419920630|ref|ZP_14438742.1| 2OG-Fe(II) oxygenase [Escherichia coli KD2]
gi|422972192|ref|ZP_16975244.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
TA124]
gi|432543823|ref|ZP_19780666.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE236]
gi|432549313|ref|ZP_19786081.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE237]
gi|432602772|ref|ZP_19839016.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE66]
gi|432622462|ref|ZP_19858493.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE76]
gi|432661450|ref|ZP_19897094.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE111]
gi|432851502|ref|ZP_20081887.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE144]
gi|169754402|gb|ACA77101.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 8739]
gi|187428676|gb|ACD07950.1| alkylated DNA repair protein AlkB [Shigella boydii CDC 3083-94]
gi|188490816|gb|EDU65919.1| alkylated DNA repair protein AlkB [Escherichia coli 53638]
gi|300397521|gb|EFJ81059.1| alkylated DNA repair protein AlkB [Escherichia coli MS 69-1]
gi|371598073|gb|EHN86888.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
TA124]
gi|383103639|gb|AFG41148.1| Alkylated DNA repair protein AlkB [Escherichia coli P12b]
gi|386204308|gb|EII08819.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0959]
gi|388384514|gb|EIL46243.1| 2OG-Fe(II) oxygenase [Escherichia coli KD2]
gi|431074233|gb|ELD81797.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE236]
gi|431079591|gb|ELD86545.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE237]
gi|431141346|gb|ELE43111.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE66]
gi|431159262|gb|ELE59819.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE76]
gi|431199187|gb|ELE97940.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE111]
gi|431399840|gb|ELG83230.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE144]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|419040368|ref|ZP_13587396.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2E]
gi|377890408|gb|EHU54865.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2E]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|419791427|ref|ZP_14317080.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392620647|gb|EIX03014.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
Length = 216
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P P +P+ F + +A+ I A
Sbjct: 67 LGWTTDRHGYCYAVRDPLTDKPWPALPLSFASVCRQAV----------------IAAGYA 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|432862806|ref|ZP_20087095.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE146]
gi|431404845|gb|ELG88091.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE146]
Length = 216
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------ADCRYNLTFRQ 211
>gi|82776184|ref|YP_402533.1| DNA repair system specific for alkylated DNA [Shigella dysenteriae
Sd197]
gi|309786613|ref|ZP_07681234.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1617]
gi|81240332|gb|ABB61042.1| DNA repair system specific for alkylated DNA [Shigella dysenteriae
Sd197]
gi|308925522|gb|EFP71008.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1617]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|24113597|ref|NP_708107.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella flexneri
2a str. 301]
gi|30063651|ref|NP_837822.1| alkylated DNA repair protein [Shigella flexneri 2a str. 2457T]
gi|82544554|ref|YP_408501.1| AlkB [Shigella boydii Sb227]
gi|110806186|ref|YP_689706.1| alkylated DNA repair protein [Shigella flexneri 5 str. 8401]
gi|384543876|ref|YP_005727939.1| Alkylated DNA repair protein [Shigella flexneri 2002017]
gi|415853349|ref|ZP_11529358.1| alkylated DNA repair protein AlkB [Shigella flexneri 2a str. 2457T]
gi|417713246|ref|ZP_12362213.1| alkylated DNA repair protein AlkB [Shigella flexneri K-272]
gi|417718087|ref|ZP_12366988.1| alkylated DNA repair protein AlkB [Shigella flexneri K-227]
gi|417723863|ref|ZP_12372668.1| alkylated DNA repair protein AlkB [Shigella flexneri K-304]
gi|417729133|ref|ZP_12377831.1| alkylated DNA repair protein AlkB [Shigella flexneri K-671]
gi|417734498|ref|ZP_12383149.1| alkylated DNA repair protein AlkB [Shigella flexneri 2747-71]
gi|417739045|ref|ZP_12387625.1| alkylated DNA repair protein AlkB [Shigella flexneri 4343-70]
gi|417828604|ref|ZP_12475157.1| alkylated DNA repair protein AlkB [Shigella flexneri J1713]
gi|418257179|ref|ZP_12880863.1| alkylated DNA repair protein AlkB [Shigella flexneri 6603-63]
gi|420321091|ref|ZP_14822921.1| alkylated DNA repair protein AlkB [Shigella flexneri 2850-71]
gi|420340932|ref|ZP_14842441.1| alkylated DNA repair protein AlkB [Shigella flexneri K-404]
gi|424838589|ref|ZP_18263226.1| alkylated DNA repair protein [Shigella flexneri 5a str. M90T]
gi|24052651|gb|AAN43814.1| alkylated DNA repair protein [Shigella flexneri 2a str. 301]
gi|30041904|gb|AAP17631.1| alkylated DNA repair protein [Shigella flexneri 2a str. 2457T]
gi|81245965|gb|ABB66673.1| AlkB [Shigella boydii Sb227]
gi|110615734|gb|ABF04401.1| DNA repair system specific for alkylated DNA [Shigella flexneri 5
str. 8401]
gi|281601662|gb|ADA74646.1| Alkylated DNA repair protein [Shigella flexneri 2002017]
gi|313651326|gb|EFS15724.1| alkylated DNA repair protein AlkB [Shigella flexneri 2a str. 2457T]
gi|332754856|gb|EGJ85221.1| alkylated DNA repair protein AlkB [Shigella flexneri 4343-70]
gi|332755258|gb|EGJ85622.1| alkylated DNA repair protein AlkB [Shigella flexneri K-671]
gi|332756572|gb|EGJ86923.1| alkylated DNA repair protein AlkB [Shigella flexneri 2747-71]
gi|333002937|gb|EGK22493.1| alkylated DNA repair protein AlkB [Shigella flexneri K-272]
gi|333016721|gb|EGK36050.1| alkylated DNA repair protein AlkB [Shigella flexneri K-304]
gi|333016942|gb|EGK36266.1| alkylated DNA repair protein AlkB [Shigella flexneri K-227]
gi|335574980|gb|EGM61292.1| alkylated DNA repair protein AlkB [Shigella flexneri J1713]
gi|383467641|gb|EID62662.1| alkylated DNA repair protein [Shigella flexneri 5a str. M90T]
gi|391248384|gb|EIQ07626.1| alkylated DNA repair protein AlkB [Shigella flexneri 2850-71]
gi|391271462|gb|EIQ30336.1| alkylated DNA repair protein AlkB [Shigella flexneri K-404]
gi|397897332|gb|EJL13741.1| alkylated DNA repair protein AlkB [Shigella flexneri 6603-63]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|416296631|ref|ZP_11651491.1| Alkylated DNA repair protein AlkB [Shigella flexneri CDC 796-83]
gi|417682823|ref|ZP_12332176.1| alkylated DNA repair protein AlkB [Shigella boydii 3594-74]
gi|420326143|ref|ZP_14827895.1| alkylated DNA repair protein AlkB [Shigella flexneri CCH060]
gi|420351568|ref|ZP_14852752.1| alkylated DNA repair protein AlkB [Shigella boydii 4444-74]
gi|421683275|ref|ZP_16123071.1| alkylated DNA repair protein AlkB [Shigella flexneri 1485-80]
gi|320185887|gb|EFW60637.1| Alkylated DNA repair protein AlkB [Shigella flexneri CDC 796-83]
gi|332093507|gb|EGI98565.1| alkylated DNA repair protein AlkB [Shigella boydii 3594-74]
gi|391250646|gb|EIQ09866.1| alkylated DNA repair protein AlkB [Shigella flexneri CCH060]
gi|391287295|gb|EIQ45825.1| alkylated DNA repair protein AlkB [Shigella boydii 4444-74]
gi|404339129|gb|EJZ65569.1| alkylated DNA repair protein AlkB [Shigella flexneri 1485-80]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFYPLT-------TDCRYNLTFRQ 211
>gi|417540516|ref|ZP_12192521.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
gi|353662540|gb|EHD01507.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSGPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|387607904|ref|YP_006096760.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli 042]
gi|284922204|emb|CBG35286.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli 042]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------ADCRYNLTFRQ 211
>gi|440286858|ref|YP_007339623.1| alkylated DNA repair protein [Enterobacteriaceae bacterium strain
FGI 57]
gi|440046380|gb|AGB77438.1| alkylated DNA repair protein [Enterobacteriaceae bacterium strain
FGI 57]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
SPD C+ N Y KL LHQDKDE+ S P+VS S+G A F +G L+ ++
Sbjct: 112 FSPDACLINRYLPGAKLSLHQDKDEATLSA----PIVSVSLGLPAVFQFGGLKRNDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG++ + P P+ + R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKPGHHPQ-------VGPLRYNLTFR 210
>gi|215487431|ref|YP_002329862.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O127:H6 str. E2348/69]
gi|312967513|ref|ZP_07781728.1| alkylated DNA repair protein AlkB [Escherichia coli 2362-75]
gi|419002762|ref|ZP_13550289.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1B]
gi|419008456|ref|ZP_13555887.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1C]
gi|419014136|ref|ZP_13561487.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1D]
gi|419019139|ref|ZP_13566446.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1E]
gi|419024641|ref|ZP_13571867.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2A]
gi|419029681|ref|ZP_13576844.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2C]
gi|419035480|ref|ZP_13582566.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2D]
gi|215265503|emb|CAS09905.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O127:H6 str. E2348/69]
gi|312287710|gb|EFR15615.1| alkylated DNA repair protein AlkB [Escherichia coli 2362-75]
gi|377843974|gb|EHU09011.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1C]
gi|377847641|gb|EHU12639.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1B]
gi|377857474|gb|EHU22325.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1D]
gi|377860193|gb|EHU25019.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1E]
gi|377863425|gb|EHU28230.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2A]
gi|377877863|gb|EHU42452.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2C]
gi|377879836|gb|EHU44408.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2D]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|387813610|ref|YP_005429092.1| 2OG-Fe(II) oxygenase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338622|emb|CCG94669.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 80/185 (43%), Gaps = 30/185 (16%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + M C G W D +Y P G P +P F L K+ +
Sbjct: 57 GHQMSAAMTCCGPLGWVTDETGYRYQPQDPLSGLPWPAMPESFVSLACKSAR-------- 108
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
EA P PD C+ N Y K+GLHQDKDE D P+VS S+G
Sbjct: 109 --------EAGFPGFDPDACLINRYQPGAKMGLHQDKDEK----DFAWPIVSVSLGLPIV 156
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F +G L+ +++LE GDV+++GG +R +HGV + P + R N
Sbjct: 157 FQFGGLKRSDCPARILLEHGDVVVWGGPARLRYHGVLTLKAGEHPVT-------GSARYN 209
Query: 581 LTFRQ 585
LTFR+
Sbjct: 210 LTFRK 214
>gi|378979857|ref|YP_005227998.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|421909540|ref|ZP_16339350.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|364519268|gb|AEW62396.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|410116442|emb|CCM81975.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 198
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 91 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 146
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + PK+ R NLTFRQ
Sbjct: 147 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPKT-------GDCRYNLTFRQ 192
>gi|419950521|ref|ZP_14466733.1| 2OG-Fe(II) oxygenase [Escherichia coli CUMT8]
gi|422762272|ref|ZP_16816029.1| alkylated DNA repair protein AlkB [Escherichia coli E1167]
gi|432750697|ref|ZP_19985301.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE29]
gi|432968321|ref|ZP_20157236.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE203]
gi|324117898|gb|EGC11797.1| alkylated DNA repair protein AlkB [Escherichia coli E1167]
gi|388416622|gb|EIL76503.1| 2OG-Fe(II) oxygenase [Escherichia coli CUMT8]
gi|431296679|gb|ELF86390.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE29]
gi|431471438|gb|ELH51331.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE203]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|455644465|gb|EMF23565.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii GTC 09479]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F L +A + G D +
Sbjct: 67 LGWTTDQHGYLYSPCDPLTGVHWPPLPDAFADLCQQA---------ATAAGYADFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 114 ---PDACLINRYTPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GDV+++GG SR +HG++ + T L + R NLTFRQ
Sbjct: 167 RLLLEHGDVVVWGGNSRLFYHGIQPL--KTGYHPLTGDC-----RYNLTFRQ 211
>gi|415840604|ref|ZP_11522032.1| alkylated DNA repair protein AlkB [Escherichia coli RN587/1]
gi|417282605|ref|ZP_12069905.1| alkylated DNA repair protein AlkB [Escherichia coli 3003]
gi|425278511|ref|ZP_18669757.1| alkylated DNA repair protein AlkB [Escherichia coli ARS4.2123]
gi|323188061|gb|EFZ73356.1| alkylated DNA repair protein AlkB [Escherichia coli RN587/1]
gi|386246934|gb|EII88664.1| alkylated DNA repair protein AlkB [Escherichia coli 3003]
gi|408202099|gb|EKI27233.1| alkylated DNA repair protein AlkB [Escherichia coli ARS4.2123]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|222156969|ref|YP_002557108.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
LF82]
gi|306814674|ref|ZP_07448836.1| 2OG-Fe(II) oxygenase [Escherichia coli NC101]
gi|331658292|ref|ZP_08359254.1| alkylated DNA repair protein AlkB [Escherichia coli TA206]
gi|331683889|ref|ZP_08384485.1| alkylated DNA repair protein AlkB [Escherichia coli H299]
gi|387617573|ref|YP_006120595.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O83:H1 str. NRG 857C]
gi|416335401|ref|ZP_11672094.1| Alkylated DNA repair protein AlkB [Escherichia coli WV_060327]
gi|422370211|ref|ZP_16450605.1| alkylated DNA repair protein AlkB [Escherichia coli MS 16-3]
gi|422382206|ref|ZP_16462367.1| alkylated DNA repair protein AlkB [Escherichia coli MS 57-2]
gi|425301074|ref|ZP_18690972.1| alkylated DNA repair protein AlkB [Escherichia coli 07798]
gi|432381953|ref|ZP_19624896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE15]
gi|432387765|ref|ZP_19630654.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE16]
gi|432514515|ref|ZP_19751739.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE224]
gi|432612022|ref|ZP_19848184.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE72]
gi|432646784|ref|ZP_19882574.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE86]
gi|432656367|ref|ZP_19892071.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE93]
gi|432699644|ref|ZP_19934798.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE169]
gi|432732947|ref|ZP_19967780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE45]
gi|432746256|ref|ZP_19980922.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE43]
gi|432760033|ref|ZP_19994527.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE46]
gi|432899231|ref|ZP_20109923.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE192]
gi|432905472|ref|ZP_20114339.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE194]
gi|432938564|ref|ZP_20136842.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE183]
gi|432972416|ref|ZP_20161283.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE207]
gi|432985972|ref|ZP_20174695.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE215]
gi|433029188|ref|ZP_20217047.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE109]
gi|433039213|ref|ZP_20226812.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE113]
gi|433083171|ref|ZP_20269628.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE133]
gi|433101759|ref|ZP_20287845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE145]
gi|433144803|ref|ZP_20329947.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE168]
gi|433188996|ref|ZP_20373094.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE88]
gi|433198848|ref|ZP_20382750.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE94]
gi|450190777|ref|ZP_21890938.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SEPT362]
gi|222033974|emb|CAP76715.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
LF82]
gi|305852068|gb|EFM52520.1| 2OG-Fe(II) oxygenase [Escherichia coli NC101]
gi|312946834|gb|ADR27661.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O83:H1 str. NRG 857C]
gi|315298038|gb|EFU57307.1| alkylated DNA repair protein AlkB [Escherichia coli MS 16-3]
gi|320196084|gb|EFW70708.1| Alkylated DNA repair protein AlkB [Escherichia coli WV_060327]
gi|324006586|gb|EGB75805.1| alkylated DNA repair protein AlkB [Escherichia coli MS 57-2]
gi|331056540|gb|EGI28549.1| alkylated DNA repair protein AlkB [Escherichia coli TA206]
gi|331078841|gb|EGI50043.1| alkylated DNA repair protein AlkB [Escherichia coli H299]
gi|408213460|gb|EKI37945.1| alkylated DNA repair protein AlkB [Escherichia coli 07798]
gi|430906413|gb|ELC28013.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE16]
gi|430907428|gb|ELC28926.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE15]
gi|431041911|gb|ELD52406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE224]
gi|431148196|gb|ELE49487.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE72]
gi|431180821|gb|ELE80708.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE86]
gi|431190837|gb|ELE90223.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE93]
gi|431243393|gb|ELF37780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE169]
gi|431276134|gb|ELF67161.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE45]
gi|431291295|gb|ELF81808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE43]
gi|431307687|gb|ELF95977.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE46]
gi|431426883|gb|ELH08927.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE192]
gi|431432707|gb|ELH14384.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE194]
gi|431463299|gb|ELH43492.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE183]
gi|431481918|gb|ELH61625.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE207]
gi|431500209|gb|ELH79225.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE215]
gi|431542928|gb|ELI17924.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE109]
gi|431551313|gb|ELI25299.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE113]
gi|431602063|gb|ELI71572.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE133]
gi|431619353|gb|ELI88277.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE145]
gi|431661498|gb|ELJ28311.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE168]
gi|431705702|gb|ELJ70292.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE88]
gi|431721552|gb|ELJ85546.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE94]
gi|449320085|gb|EMD10122.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SEPT362]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|417342516|ref|ZP_12123306.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
gi|357956542|gb|EHJ81934.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAAFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|340777083|ref|ZP_08697026.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acetobacter aceti
NBRC 14818]
Length = 200
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y +P +G P++P F LV +A + A P + N
Sbjct: 61 RYTPVQPENGQPWPVMPDVFRSLVEEATE----------------AAGFPHPPLQAGLLN 104
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y +L LHQDKDE D +P+VS S+G +A FL+G L A ++ L GDV+
Sbjct: 105 LYRPGTRLSLHQDKDEE----DAEIPIVSVSLGVAATFLWGGLDRAAPVRRFRLSHGDVV 160
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++GG SR +FHGV AP ++ RLN+TFRQ
Sbjct: 161 VWGGPSRMMFHGV-------APLAVSSHPLTGECRLNMTFRQ 195
>gi|432554302|ref|ZP_19791025.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE47]
gi|431084107|gb|ELD90278.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE47]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|307129703|ref|YP_003881719.1| alkylated DNA repair protein alkB [Dickeya dadantii 3937]
gi|306527232|gb|ADM97162.1| Alkylated DNA repair protein AlkB [Dickeya dadantii 3937]
Length = 217
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F QL A + EA
Sbjct: 70 LGWVSDELGYRYSAQDPLTGQPWPAMPACFWQLAQAAAR----------------EAGYD 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y+ KL LHQDKDE D P+VS S+G SA FL+G + +
Sbjct: 114 GFAPDACLINRYAVGAKLSLHQDKDEQ----DLRQPIVSVSLGLSAVFLFGGAKRSDPCQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +H + + P + +E R+NLTFR+
Sbjct: 170 RLALMHGDVVVWGGPSRLYYHAILPLKNGPLPAGMSDEV-----RVNLTFRK 216
>gi|148254384|ref|YP_001238969.1| DNA-N1-methyladenine dioxygenase [Bradyrhizobium sp. BTAi1]
gi|146406557|gb|ABQ35063.1| DNA-N1-methyladenine dioxygenase [Bradyrhizobium sp. BTAi1]
Length = 217
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P G P IP F L +A EA
Sbjct: 68 CGSCGWVTDRTGYRYDALDPESGQPWPAIPPLFRDLAEQAAS----------------EA 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y K+ LHQD+DE D P+VS S+G A FL+G L+
Sbjct: 112 GFADFAPDACLINRYEPGAKMSLHQDRDER----DIGAPIVSVSLGLPATFLFGGLKRTD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG +R FHG+ AP + E + R R+NLTFR+
Sbjct: 168 KTQRYRLVHGDVVVWGGPARLAFHGI-------APLADGEHALLGRRRINLTFRR 215
>gi|430807978|ref|ZP_19435093.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus sp.
HMR-1]
gi|429499701|gb|EKZ98109.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus sp.
HMR-1]
Length = 220
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y P G P +P F L A + A
Sbjct: 71 CGERGWVSDRTGYRYDAVDPESGRPWPAMPAVFRSLAEHAAE----------------AA 114
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P +PD C+ N Y +L LHQD+DE +D P+VS S+G A FL+G LR
Sbjct: 115 GYPGFAPDACLINRYLPGTRLSLHQDRDE----LDLRAPIVSVSLGLPAVFLWGGLRRAD 170
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG SR +FHG+ AP + + R+NLTFR+
Sbjct: 171 RPDRFRLAHGDVVVWGGPSRLVFHGI-------APLADGDHALTGSERINLTFRK 218
>gi|419233059|ref|ZP_13775836.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9B]
gi|419267747|ref|ZP_13810102.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10C]
gi|419273326|ref|ZP_13815625.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10D]
gi|378077586|gb|EHW39580.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9B]
gi|378111575|gb|EHW73159.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10C]
gi|378116783|gb|EHW78303.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10D]
Length = 229
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|259907960|ref|YP_002648316.1| DNA repair system specific for alkylated DNA [Erwinia pyrifoliae
Ep1/96]
gi|387870759|ref|YP_005802131.1| alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia pyrifoliae
DSM 12163]
gi|224963582|emb|CAX55072.1| DNA repair system specific for alkylated DNA [Erwinia pyrifoliae
Ep1/96]
gi|283477844|emb|CAY73760.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia pyrifoliae
DSM 12163]
Length = 213
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG + D QY +G P +P +F QL + + EA
Sbjct: 67 LGWSTDSRGYQYSAQDEANGQRWPAMPPQFRQLAQECAR----------------EAGFS 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y K+ LHQDKDE D P+VS S+G A FL+G ++
Sbjct: 111 GFNPDACLINRYEPGAKMTLHQDKDER----DLRQPIVSVSLGLPAVFLFGGFERGDASQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GDV+++GG SR +HG+ + P + R NLTFR+
Sbjct: 167 RVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLT-------GAFRFNLTFRR 211
>gi|422806217|ref|ZP_16854649.1| alkylated DNA repair protein AlkB [Escherichia fergusonii B253]
gi|324112755|gb|EGC06731.1| alkylated DNA repair protein AlkB [Escherichia fergusonii B253]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G
Sbjct: 102 RAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFG 157
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+ K+++LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 158 GLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT-------ADCRYNLTFR 210
Query: 585 Q 585
Q
Sbjct: 211 Q 211
>gi|260432005|ref|ZP_05785976.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415833|gb|EEX09092.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 215
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y K+GLHQD+DE+ D PVVS S+GD A F G+ + V
Sbjct: 115 PDCCLINYYGEGAKMGLHQDRDEA----DFSWPVVSISLGDDALFRIGNTTRGGKTESVW 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV+I GG +R +HG+++I LL + GR+NLT R
Sbjct: 171 LNSGDVVIMGGPARLTYHGIDRI--RFGSSRLLPKG----GRINLTLR 212
>gi|218515447|ref|ZP_03512287.1| alkylated DNA repair protein [Rhizobium etli 8C-3]
Length = 203
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQD+DE PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYSDEARMGLHQDRDERNLQA----PVVSISLGNSCLFRVGGLIRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|424815722|ref|ZP_18240873.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia fergusonii ECD227]
gi|325496742|gb|EGC94601.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia fergusonii ECD227]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPHSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------ADCRYNLTFRQ 211
>gi|222832662|gb|EEE71139.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y T P G P++P F +L +A ++ G D E
Sbjct: 67 ALGWTTDRRGYRYTTVDPDTGKPWPVMPEVFFRLANEAAAEA---------GFDDFE--- 114
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
PD C+ N Y +L LHQDK+E P+VS S+G A FL+G A
Sbjct: 115 ----PDACLLNRYLPGSRLALHQDKNEQAYET----PIVSVSLGMRATFLFGGHARTAPT 166
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
KV L GDV+++GG R +HGV I AP +LL R+N TFR+
Sbjct: 167 IKVPLHHGDVVVWGGADRLRYHGVMPI--KDAPHALLGSQ-----RINFTFRK 212
>gi|418867270|ref|ZP_13421730.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|392839690|gb|EJA95229.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P++S S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIISVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ILE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRIILEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|331673732|ref|ZP_08374495.1| alkylated DNA repair protein AlkB [Escherichia coli TA280]
gi|331069005|gb|EGI40397.1| alkylated DNA repair protein AlkB [Escherichia coli TA280]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GD++++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDMVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|209919671|ref|YP_002293755.1| DNA repair protein [Escherichia coli SE11]
gi|260856200|ref|YP_003230091.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. 11368]
gi|260868929|ref|YP_003235331.1| oxidative demethylase AlkB [Escherichia coli O111:H- str. 11128]
gi|300822666|ref|ZP_07102804.1| alkylated DNA repair protein AlkB [Escherichia coli MS 119-7]
gi|331678167|ref|ZP_08378842.1| alkylated DNA repair protein AlkB [Escherichia coli H591]
gi|415793613|ref|ZP_11496230.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa14]
gi|415822916|ref|ZP_11511435.1| alkylated DNA repair protein AlkB [Escherichia coli OK1180]
gi|417146200|ref|ZP_11987158.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2264]
gi|417191867|ref|ZP_12013967.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0522]
gi|417213568|ref|ZP_12022609.1| alkylated DNA repair protein AlkB [Escherichia coli JB1-95]
gi|417223353|ref|ZP_12026793.1| alkylated DNA repair protein AlkB [Escherichia coli 96.154]
gi|417269444|ref|ZP_12056804.1| alkylated DNA repair protein AlkB [Escherichia coli 3.3884]
gi|417298539|ref|ZP_12085778.1| alkylated DNA repair protein AlkB [Escherichia coli 900105 (10e)]
gi|417592491|ref|ZP_12243188.1| alkylated DNA repair protein AlkB [Escherichia coli 2534-86]
gi|417602825|ref|ZP_12253395.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_94C]
gi|417608861|ref|ZP_12259364.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_DG131-3]
gi|418944585|ref|ZP_13497622.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H43 str. T22]
gi|419197696|ref|ZP_13741084.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8A]
gi|419203987|ref|ZP_13747170.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8B]
gi|419210387|ref|ZP_13753466.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8C]
gi|419216263|ref|ZP_13759265.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8D]
gi|419222205|ref|ZP_13765128.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8E]
gi|419227402|ref|ZP_13770260.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9A]
gi|419238486|ref|ZP_13781207.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9C]
gi|419243935|ref|ZP_13786574.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9D]
gi|419255594|ref|ZP_13798113.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10A]
gi|419261798|ref|ZP_13804220.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10B]
gi|419284817|ref|ZP_13826993.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10F]
gi|419370720|ref|ZP_13911839.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14A]
gi|419877040|ref|ZP_14398698.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9534]
gi|419883257|ref|ZP_14404389.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9545]
gi|419886976|ref|ZP_14407594.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9570]
gi|419895818|ref|ZP_14415603.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9574]
gi|419899925|ref|ZP_14419406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9942]
gi|419909104|ref|ZP_14427738.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. CVM10026]
gi|420089889|ref|ZP_14601669.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9602]
gi|420095748|ref|ZP_14607228.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9634]
gi|420102266|ref|ZP_14613290.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9455]
gi|420109985|ref|ZP_14620051.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9553]
gi|420118024|ref|ZP_14627368.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10021]
gi|420122399|ref|ZP_14631375.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10030]
gi|420128467|ref|ZP_14637023.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10224]
gi|420134371|ref|ZP_14642480.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9952]
gi|422350978|ref|ZP_16431824.1| alkylated DNA repair protein AlkB [Escherichia coli MS 117-3]
gi|423706258|ref|ZP_17680641.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B799]
gi|424754239|ref|ZP_18182157.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424757462|ref|ZP_18185199.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424772670|ref|ZP_18199764.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CFSAN001632]
gi|425380266|ref|ZP_18764306.1| alkylated DNA repair protein AlkB [Escherichia coli EC1865]
gi|432377384|ref|ZP_19620375.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE12]
gi|432835201|ref|ZP_20068740.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE136]
gi|433092603|ref|ZP_20278870.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE138]
gi|209912930|dbj|BAG78004.1| DNA repair protein [Escherichia coli SE11]
gi|257754849|dbj|BAI26351.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. 11368]
gi|257765285|dbj|BAI36780.1| oxidative demethylase AlkB [Escherichia coli O111:H- str. 11128]
gi|300524866|gb|EFK45935.1| alkylated DNA repair protein AlkB [Escherichia coli MS 119-7]
gi|323152272|gb|EFZ38562.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa14]
gi|323176871|gb|EFZ62461.1| alkylated DNA repair protein AlkB [Escherichia coli OK1180]
gi|324020890|gb|EGB90109.1| alkylated DNA repair protein AlkB [Escherichia coli MS 117-3]
gi|331074627|gb|EGI45947.1| alkylated DNA repair protein AlkB [Escherichia coli H591]
gi|345338828|gb|EGW71255.1| alkylated DNA repair protein AlkB [Escherichia coli 2534-86]
gi|345350491|gb|EGW82766.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_94C]
gi|345358070|gb|EGW90258.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_DG131-3]
gi|375320110|gb|EHS66117.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H43 str. T22]
gi|378047228|gb|EHW09600.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8A]
gi|378048707|gb|EHW11060.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8B]
gi|378053843|gb|EHW16135.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8C]
gi|378062747|gb|EHW24924.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8D]
gi|378065527|gb|EHW27672.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8E]
gi|378074915|gb|EHW36944.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9A]
gi|378084386|gb|EHW46298.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9C]
gi|378091013|gb|EHW52848.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9D]
gi|378100580|gb|EHW62276.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10A]
gi|378106847|gb|EHW68475.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10B]
gi|378132071|gb|EHW93424.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10F]
gi|378217314|gb|EHX77593.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14A]
gi|385712142|gb|EIG49097.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B799]
gi|386163652|gb|EIH25447.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2264]
gi|386190749|gb|EIH79495.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0522]
gi|386194264|gb|EIH88520.1| alkylated DNA repair protein AlkB [Escherichia coli JB1-95]
gi|386203155|gb|EII02146.1| alkylated DNA repair protein AlkB [Escherichia coli 96.154]
gi|386228249|gb|EII55605.1| alkylated DNA repair protein AlkB [Escherichia coli 3.3884]
gi|386258219|gb|EIJ13701.1| alkylated DNA repair protein AlkB [Escherichia coli 900105 (10e)]
gi|388341791|gb|EIL07876.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9534]
gi|388358992|gb|EIL23361.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9545]
gi|388360139|gb|EIL24386.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9574]
gi|388364220|gb|EIL28089.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9570]
gi|388373843|gb|EIL37071.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. CVM10026]
gi|388379087|gb|EIL41778.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9942]
gi|394385586|gb|EJE63113.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10224]
gi|394387099|gb|EJE64569.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9602]
gi|394391856|gb|EJE68685.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9634]
gi|394401465|gb|EJE77278.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10021]
gi|394405223|gb|EJE80458.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9553]
gi|394412391|gb|EJE86526.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9455]
gi|394421626|gb|EJE95084.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9952]
gi|394421984|gb|EJE95395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10030]
gi|408296633|gb|EKJ14859.1| alkylated DNA repair protein AlkB [Escherichia coli EC1865]
gi|421933729|gb|EKT91514.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421938221|gb|EKT95808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CFSAN001632]
gi|421949194|gb|EKU06183.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CFSAN001630]
gi|430898683|gb|ELC20816.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE12]
gi|431385561|gb|ELG69548.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE136]
gi|431609933|gb|ELI79238.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE138]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|372279456|ref|ZP_09515492.1| alkylated DNA repair protein [Oceanicola sp. S124]
Length = 203
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 34/192 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
+ P R G + ++M GK W D +Y P+ PPI
Sbjct: 40 LFSPETRFGQKMSVQMTSAGKYGWFSDRRGYRYERRHPSGVDWPPI-------------P 86
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
+S I + TG + PD C+ NFY ++GLHQD+DE+ D PV+S
Sbjct: 87 ESVLAIWRAVTGLDRL--------PDCCLVNFYREGARMGLHQDRDEA----DFGYPVLS 134
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD F G+ + + L+SGDV + GG +R + HGV++I P ++ +LL +
Sbjct: 135 VSLGDDGLFRIGNETRGGKTESIWLQSGDVAVMGGAARLLHHGVDRIRPGSS--TLLAQG 192
Query: 573 SMRRGRLNLTFR 584
GR+NLT R
Sbjct: 193 ----GRINLTCR 200
>gi|74312733|ref|YP_311152.1| DNA repair system specific for alkylated DNA [Shigella sonnei
Ss046]
gi|383179179|ref|YP_005457184.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella sonnei
53G]
gi|414576821|ref|ZP_11434003.1| alkylated DNA repair protein AlkB [Shigella sonnei 3233-85]
gi|415844520|ref|ZP_11524262.1| alkylated DNA repair protein AlkB [Shigella sonnei 53G]
gi|418266606|ref|ZP_12886087.1| alkylated DNA repair protein AlkB [Shigella sonnei str. Moseley]
gi|420359286|ref|ZP_14860260.1| alkylated DNA repair protein AlkB [Shigella sonnei 3226-85]
gi|420364043|ref|ZP_14864926.1| alkylated DNA repair protein AlkB [Shigella sonnei 4822-66]
gi|73856210|gb|AAZ88917.1| DNA repair system specific for alkylated DNA [Shigella sonnei
Ss046]
gi|323168632|gb|EFZ54312.1| alkylated DNA repair protein AlkB [Shigella sonnei 53G]
gi|391281967|gb|EIQ40604.1| alkylated DNA repair protein AlkB [Shigella sonnei 3226-85]
gi|391284574|gb|EIQ43169.1| alkylated DNA repair protein AlkB [Shigella sonnei 3233-85]
gi|391293706|gb|EIQ51965.1| alkylated DNA repair protein AlkB [Shigella sonnei 4822-66]
gi|397899431|gb|EJL15805.1| alkylated DNA repair protein AlkB [Shigella sonnei str. Moseley]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|419249760|ref|ZP_13792344.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9E]
gi|378095345|gb|EHW57133.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9E]
Length = 229
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|420373585|ref|ZP_14873667.1| alkylated DNA repair protein AlkB [Shigella flexneri 1235-66]
gi|391317099|gb|EIQ74465.1| alkylated DNA repair protein AlkB [Shigella flexneri 1235-66]
Length = 301
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 66 PAMPQSFHDLCQRA----------------ATAAGYPDFQPDACLINRYAPGAKLSLHQD 109
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 110 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 165
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 166 QPLKAGFHPLT-------TDCRYNLTFRQ 187
>gi|395230504|ref|ZP_10408808.1| DNA repair system specific for alkylated DNA [Citrobacter sp. A1]
gi|421846049|ref|ZP_16279200.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424731435|ref|ZP_18160019.1| dna repair system specific for alkylated dna [Citrobacter sp. L17]
gi|394715889|gb|EJF21674.1| DNA repair system specific for alkylated DNA [Citrobacter sp. A1]
gi|411772818|gb|EKS56413.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422894086|gb|EKU33901.1| dna repair system specific for alkylated dna [Citrobacter sp. L17]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F L +A + G D +
Sbjct: 67 LGWTTDQHGYLYSPFDPLTGVHWPPLPDAFADLCQQA---------ATAAGYADFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 114 ---PDACLINRYTPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GDV+++GG SR +HG++ + T L + R NLTFRQ
Sbjct: 167 RLLLEHGDVVVWGGNSRLFYHGIQPL--KTGYHPLTGDC-----RYNLTFRQ 211
>gi|326318676|ref|YP_004236348.1| 2OG-Fe(II) oxygenase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323375512|gb|ADX47781.1| 2OG-Fe(II) oxygenase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 222
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F +L +A + A P
Sbjct: 76 LGWVSDRRGYRYAPLDPGSGTAWPAMPDTFRRLAREAAE----------------YAGFP 119
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ +L LHQD+DE D P+VS S+G A FL+G
Sbjct: 120 DFEPDSCLVNRYAPGARLSLHQDRDEH----DLQAPIVSVSLGLPAVFLWGGFARTGPVA 175
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L+ GDV+++GG R FHGV+ + P+ E R+NLTFR+
Sbjct: 176 RVPLQHGDVVVWGGPDRLRFHGVQPVKDGLHPEWGAE-------RVNLTFRK 220
>gi|206578796|ref|YP_002237372.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae 342]
gi|206567854|gb|ACI09630.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae 342]
Length = 217
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PNFSPDACLINRYQPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 166 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 211
>gi|94314187|ref|YP_587396.1| alpha-ketoglutarate-dependent dioxygenase alkB [Cupriavidus
metallidurans CH34]
gi|93358039|gb|ABF12127.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Cupriavidus metallidurans CH34]
Length = 223
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y P G P +P F L A + A
Sbjct: 74 CGERGWVSDRTGYRYDAVDPESGRPWPAMPAVFRSLAEHAAE----------------AA 117
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P +PD C+ N Y +L LHQD+DE +D P+VS S+G A FL+G LR
Sbjct: 118 GYPGFAPDACLINRYLPGTRLSLHQDRDE----LDLRAPIVSVSMGLPAVFLWGGLRRAD 173
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG SR +FHG+ AP + + R+NLTFR+
Sbjct: 174 RPGRFRLAHGDVVVWGGPSRLVFHGI-------APLADGDHALTGSERINLTFRK 221
>gi|237732263|ref|ZP_04562744.1| DNA repair system specific for alkylated DNA [Citrobacter sp. 30_2]
gi|226907802|gb|EEH93720.1| DNA repair system specific for alkylated DNA [Citrobacter sp. 30_2]
Length = 216
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F L +A + G D +
Sbjct: 67 LGWTTDQHGYLYSPFDPLTGTHWPPLPDAFADLCQQA---------ATAAGYADFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 114 ---PDACLINRYTPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GDV+++GG SR +HG++ + T L + R NLTFRQ
Sbjct: 167 RLLLEHGDVVVWGGNSRLFYHGIQPL--KTGYHPLTGDC-----RYNLTFRQ 211
>gi|417756473|ref|ZP_12404548.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2B]
gi|377873889|gb|EHU38520.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2B]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGGHPLT-------TDCRYNLTFRQ 211
>gi|239817611|ref|YP_002946521.1| 2OG-Fe(II) oxygenase [Variovorax paradoxus S110]
gi|239804188|gb|ACS21255.1| 2OG-Fe(II) oxygenase [Variovorax paradoxus S110]
Length = 220
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NW--DPETSQY 425
Y++ EV+ R L + PGGF + + M G+ W D +Y
Sbjct: 36 YVDELLSALHEVEQRAAFRHL-VTPGGF---------AMSVAMTNCGRLGWISDRRGYRY 85
Query: 426 GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
G P G P +P F +L Q S A EA PD C+ N Y
Sbjct: 86 GEHDPETGLPWPAMPAAFARLA----QASAA------------EAGFAGFEPDACLVNRY 129
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
+L LHQDKDE D P+VS S+G A FL+G L A ++ L GDV+++
Sbjct: 130 EPGTRLSLHQDKDER----DYGAPIVSVSLGMPATFLFGGLARSDKAARIPLVHGDVVVW 185
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GG R +HGV + + P +LL R+NLTFR+
Sbjct: 186 GGPDRLRYHGVLPL--EDRPHALLGSR-----RINLTFRK 218
>gi|418997415|ref|ZP_13545009.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1A]
gi|377843242|gb|EHU08282.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1A]
Length = 215
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 89 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 132
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 133 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 188
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 189 QPLKVGGHPLT-------TDCRYNLTFRQ 210
>gi|288934299|ref|YP_003438358.1| 2OG-Fe(II) oxygenase [Klebsiella variicola At-22]
gi|290508502|ref|ZP_06547873.1| alkylated DNA repair protein [Klebsiella sp. 1_1_55]
gi|288889028|gb|ADC57346.1| 2OG-Fe(II) oxygenase [Klebsiella variicola At-22]
gi|289777896|gb|EFD85893.1| alkylated DNA repair protein [Klebsiella sp. 1_1_55]
Length = 217
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PNFSPDACLINRYQPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 166 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 211
>gi|437199164|ref|ZP_20711478.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|435220476|gb|ELO02764.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
Length = 201
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 90 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 145
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 146 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 196
>gi|34498651|ref|NP_902866.1| alkylated DNA repair protein, AlkB protein [Chromobacterium
violaceum ATCC 12472]
gi|34104504|gb|AAQ60862.1| alkylated DNA repair protein, AlkB protein [Chromobacterium
violaceum ATCC 12472]
Length = 215
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++GLHQDKDE D P+VS S+G A FL G L +++
Sbjct: 116 PDACLINCYLPGARMGLHQDKDER----DFSAPIVSVSLGLPAIFLLGGLSRADKTARIL 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDVL++GG R FHGV + P P LL RLNLTFR+
Sbjct: 172 LQHGDVLVWGGPDRLRFHGVLPVQPGIHP--LLGGR-----RLNLTFRK 213
>gi|419701048|ref|ZP_14228650.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SCI-07]
gi|380347794|gb|EIA36080.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SCI-07]
Length = 229
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGGHPLT-------TDCRYNLTFRQ 211
>gi|161613019|ref|YP_001586984.1| hypothetical protein SPAB_00726 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161362383|gb|ABX66151.1| hypothetical protein SPAB_00726 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|325272437|ref|ZP_08138825.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
TJI-51]
gi|324102438|gb|EGB99896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
TJI-51]
Length = 215
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y S P G P +P L +A A
Sbjct: 68 LGWVSDAQGYRYSRSDPLTGQPWPALPPILLTLANRAAA----------------MAGFD 111
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ +
Sbjct: 112 GFTPDACLINHYLPGTRLSLHQDRDEH----DFGQPIVSLSLGLPAVFLFGGLQRADKTQ 167
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDVL++GG+ R FHGV I P P+ M R+NLT R+
Sbjct: 168 RIALSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------MGERRINLTLRK 212
>gi|197248105|ref|YP_002147221.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|440761656|ref|ZP_20940727.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440767205|ref|ZP_20946189.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440773908|ref|ZP_20952797.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|197211808|gb|ACH49205.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|436414271|gb|ELP12202.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436421001|gb|ELP18853.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436424638|gb|ELP22406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|299533827|ref|ZP_07047198.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni S44]
gi|298718243|gb|EFI59229.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni S44]
Length = 224
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y ++GLH+D+DE D P+VS S+G FL+G L +
Sbjct: 111 PGFAPDACLINRYQPGARMGLHRDQDEH----DFAAPIVSVSLGLPCRFLWGGLTRQSPT 166
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ L GDVL++GG SR +FHGV + P LL+ R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGPSRLVFHGVAPLREGQHP--LLDNE-----RWNLTFR 211
>gi|16761192|ref|NP_456809.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29141114|ref|NP_804456.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|213161833|ref|ZP_03347543.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213646509|ref|ZP_03376562.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213852144|ref|ZP_03381676.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|289830056|ref|ZP_06547505.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378958746|ref|YP_005216232.1| hypothetical protein STBHUCCB_6410 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25299732|pir||AF0789 AlkB protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503491|emb|CAD07496.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136740|gb|AAO68305.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|374352618|gb|AEZ44379.1| hypothetical protein STBHUCCB_6410 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|168229625|ref|ZP_02654683.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168466042|ref|ZP_02699912.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818010|ref|ZP_02830010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194471668|ref|ZP_03077652.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|238913914|ref|ZP_04657751.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|409250873|ref|YP_006886681.1| Alpha-ketoglutarate-dependent dioxygenase alkB Alkylated DNA repair
protein alkB [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|417359538|ref|ZP_12133889.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|417420133|ref|ZP_12159995.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
gi|418763711|ref|ZP_13319817.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418765727|ref|ZP_13321810.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770130|ref|ZP_13326155.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418776362|ref|ZP_13332308.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418781815|ref|ZP_13337691.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785821|ref|ZP_13341648.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418803231|ref|ZP_13358855.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|419789091|ref|ZP_14314773.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|437819995|ref|ZP_20843118.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|194458032|gb|EDX46871.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195631181|gb|EDX49741.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|205335774|gb|EDZ22538.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205344780|gb|EDZ31544.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320086701|emb|CBY96472.1| Alpha-ketoglutarate-dependent dioxygenase alkB Alkylated DNA repair
protein alkB [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|353589292|gb|EHC48124.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|353619404|gb|EHC69812.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
gi|392615595|gb|EIW98031.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392731404|gb|EIZ88631.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392738333|gb|EIZ95479.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392740240|gb|EIZ97366.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392746052|gb|EJA03071.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392746073|gb|EJA03091.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751062|gb|EJA08019.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392775841|gb|EJA32532.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|435307290|gb|ELO82467.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|16765592|ref|NP_461207.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62180838|ref|YP_217255.1| DNA repair system specific for alkylated DNA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|167992595|ref|ZP_02573692.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197261936|ref|ZP_03162010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200387423|ref|ZP_03214035.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|374982219|ref|ZP_09723541.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378445694|ref|YP_005233326.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450972|ref|YP_005238331.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378700175|ref|YP_005182132.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378984827|ref|YP_005247982.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378989651|ref|YP_005252815.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701496|ref|YP_005243224.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496966|ref|YP_005397655.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|417519375|ref|ZP_12181535.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|422026550|ref|ZP_16372933.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|427567940|ref|ZP_18932944.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427588410|ref|ZP_18937740.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427611809|ref|ZP_18942600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427635616|ref|ZP_18947497.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427656575|ref|ZP_18952263.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427671392|ref|ZP_18961985.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|20141234|sp|P37462.2|ALKB_SALTY RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB;
AltName: Full=Alkylated DNA repair protein AlkB;
AltName: Full=DNA oxidative demethylase AlkB
gi|16420803|gb|AAL21166.1| DNA repair system specific for alkylated DNA [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62128471|gb|AAX66174.1| DNA repair system specific for alkylated DNA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|197240191|gb|EDY22811.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199604521|gb|EDZ03066.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205329244|gb|EDZ16008.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261247473|emb|CBG25300.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994350|gb|ACY89235.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158823|emb|CBW18336.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913255|dbj|BAJ37229.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321223036|gb|EFX48107.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130595|gb|ADX18025.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332989198|gb|AEF08181.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353646795|gb|EHC90108.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|380463787|gb|AFD59190.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|414017342|gb|EKT01072.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414032002|gb|EKT15035.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414032998|gb|EKT15976.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414036361|gb|EKT19196.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414046374|gb|EKT28705.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414047314|gb|EKT29600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414059073|gb|EKT40685.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|207857684|ref|YP_002244335.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|421357528|ref|ZP_15807839.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421361688|ref|ZP_15811947.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421367246|ref|ZP_15817440.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421371414|ref|ZP_15821573.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421375476|ref|ZP_15825588.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421379369|ref|ZP_15829438.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421384398|ref|ZP_15834423.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421388512|ref|ZP_15838502.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421392955|ref|ZP_15842904.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421397758|ref|ZP_15847670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421401995|ref|ZP_15851860.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421407008|ref|ZP_15856817.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421411541|ref|ZP_15861306.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421418361|ref|ZP_15868063.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421419800|ref|ZP_15869484.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421424552|ref|ZP_15874194.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421430563|ref|ZP_15880150.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421433997|ref|ZP_15883548.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421441625|ref|ZP_15891091.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421444375|ref|ZP_15893806.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421447214|ref|ZP_15896616.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|436619918|ref|ZP_20514564.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436684734|ref|ZP_20517884.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436795661|ref|ZP_20522434.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436808416|ref|ZP_20527840.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436817406|ref|ZP_20534488.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436830637|ref|ZP_20535379.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436849175|ref|ZP_20540344.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436856771|ref|ZP_20545693.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862610|ref|ZP_20549293.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872257|ref|ZP_20555279.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436880064|ref|ZP_20559898.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436889117|ref|ZP_20565038.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436897296|ref|ZP_20569943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436900878|ref|ZP_20571802.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436909665|ref|ZP_20576389.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436917417|ref|ZP_20580951.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436927996|ref|ZP_20587490.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436933947|ref|ZP_20590102.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942332|ref|ZP_20595315.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948635|ref|ZP_20598848.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436957273|ref|ZP_20602941.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436968377|ref|ZP_20607786.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436986324|ref|ZP_20615414.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436990898|ref|ZP_20617195.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437004221|ref|ZP_20621950.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437014528|ref|ZP_20625606.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437026879|ref|ZP_20629890.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437045095|ref|ZP_20637530.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437048494|ref|ZP_20639533.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437060932|ref|ZP_20646759.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067994|ref|ZP_20650626.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075303|ref|ZP_20653757.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080569|ref|ZP_20657173.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437091084|ref|ZP_20663075.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437102688|ref|ZP_20666716.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437119890|ref|ZP_20671108.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437127902|ref|ZP_20674992.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437135864|ref|ZP_20679510.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437143355|ref|ZP_20684222.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437154825|ref|ZP_20691285.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437157949|ref|ZP_20692903.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437167883|ref|ZP_20699081.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437174004|ref|ZP_20702075.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437183682|ref|ZP_20707837.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437258364|ref|ZP_20716401.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437266853|ref|ZP_20720937.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437282303|ref|ZP_20729178.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437298020|ref|ZP_20732929.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437313664|ref|ZP_20736832.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437324694|ref|ZP_20739806.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437336948|ref|ZP_20743157.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437364261|ref|ZP_20748577.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437408596|ref|ZP_20752481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437434403|ref|ZP_20756342.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437459492|ref|ZP_20761171.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437472678|ref|ZP_20765682.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437497529|ref|ZP_20773517.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437515017|ref|ZP_20777900.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437532381|ref|ZP_20780888.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437549341|ref|ZP_20783337.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437573249|ref|ZP_20789525.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437591542|ref|ZP_20794822.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437600871|ref|ZP_20797407.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437615336|ref|ZP_20802158.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|437643435|ref|ZP_20808422.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|437660391|ref|ZP_20812463.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437670021|ref|ZP_20815576.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437700533|ref|ZP_20823891.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437709637|ref|ZP_20826224.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437733664|ref|ZP_20832055.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437804758|ref|ZP_20839086.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|438028891|ref|ZP_20855228.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438090500|ref|ZP_20860596.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438098246|ref|ZP_20862654.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438111585|ref|ZP_20868386.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|445178239|ref|ZP_21397908.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445191000|ref|ZP_21399723.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445233935|ref|ZP_21406547.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445277202|ref|ZP_21410663.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|445335575|ref|ZP_21415470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445344837|ref|ZP_21417873.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|445363996|ref|ZP_21424835.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|206709487|emb|CAR33831.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|395988058|gb|EJH97219.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395991590|gb|EJI00714.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|395992691|gb|EJI01803.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|396004091|gb|EJI13075.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|396004391|gb|EJI13373.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396006668|gb|EJI15630.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396019386|gb|EJI28242.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396019855|gb|EJI28706.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396020423|gb|EJI29268.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396031571|gb|EJI40297.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396033205|gb|EJI41920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396033522|gb|EJI42229.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396038362|gb|EJI47001.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396045907|gb|EJI54498.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396047211|gb|EJI55787.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396055611|gb|EJI64096.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396060093|gb|EJI68540.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396060982|gb|EJI69418.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396063380|gb|EJI71774.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396067860|gb|EJI76217.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396075047|gb|EJI83323.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|434962281|gb|ELL55502.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434964893|gb|ELL57860.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434967434|gb|ELL60250.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434971855|gb|ELL64358.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434983379|gb|ELL75175.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434989030|gb|ELL80603.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990782|gb|ELL82312.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434998859|gb|ELL90073.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435000176|gb|ELL91324.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435004720|gb|ELL95670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|435006368|gb|ELL97269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435008143|gb|ELL98969.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014423|gb|ELM05000.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435021459|gb|ELM11827.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435029089|gb|ELM19149.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435031865|gb|ELM21820.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435035038|gb|ELM24886.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435042175|gb|ELM31907.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435044353|gb|ELM34050.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435055506|gb|ELM44918.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435056928|gb|ELM46298.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435060689|gb|ELM49936.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435061550|gb|ELM50773.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435069395|gb|ELM58397.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435072963|gb|ELM61868.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435080323|gb|ELM69004.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085056|gb|ELM73611.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435086025|gb|ELM74570.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435090212|gb|ELM78616.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435095601|gb|ELM83896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435098927|gb|ELM87156.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435106110|gb|ELM94129.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435113232|gb|ELN01081.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113400|gb|ELN01248.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435122779|gb|ELN10292.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435128489|gb|ELN15826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435129485|gb|ELN16781.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435137653|gb|ELN24693.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435138831|gb|ELN25846.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435140209|gb|ELN27172.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435150861|gb|ELN37525.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435153129|gb|ELN39744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435158236|gb|ELN44647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435162219|gb|ELN48405.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435166693|gb|ELN52666.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435167865|gb|ELN53720.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435176706|gb|ELN62073.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435178896|gb|ELN64071.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435181895|gb|ELN66929.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435193807|gb|ELN78280.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435197297|gb|ELN81589.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435204849|gb|ELN88506.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435208867|gb|ELN92254.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435214085|gb|ELN96931.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435222292|gb|ELO04414.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435225186|gb|ELO07096.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435225979|gb|ELO07577.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435229269|gb|ELO10647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435243095|gb|ELO23391.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435246837|gb|ELO26826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435246964|gb|ELO26952.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435254418|gb|ELO33813.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435261996|gb|ELO41140.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435262667|gb|ELO41752.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435268958|gb|ELO47511.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435273767|gb|ELO51992.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435274618|gb|ELO52719.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|435281782|gb|ELO59433.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435286993|gb|ELO64217.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435289532|gb|ELO66491.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435302561|gb|ELO78519.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435316354|gb|ELO89509.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435326455|gb|ELO98267.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435328186|gb|ELO99784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435330821|gb|ELP02062.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|444855204|gb|ELX80254.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444860950|gb|ELX85848.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444868240|gb|ELX92885.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444874464|gb|ELX98710.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444879853|gb|ELY03943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|444883395|gb|ELY07281.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|444887091|gb|ELY10818.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|260906339|ref|ZP_05914661.1| 2OG-Fe(II) oxygenase [Brevibacterium linens BL2]
Length = 240
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
SPD+ + N+Y K+G+HQDKDE + PVVS S+GD+ F +G+ + +
Sbjct: 132 SPDVALVNYYDGQAKMGMHQDKDELDPA-----PVVSLSLGDTCIFRFGNTDNRNKPYED 186
Query: 536 I-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
I L SGD +FGG +R FHGV KI TAP+ + + GR+N+T R
Sbjct: 187 IRLASGDAFVFGGPARFAFHGVTKILDATAPEHGRLD-HLGGGRINITMR 235
>gi|381403899|ref|ZP_09928583.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea sp. Sc1]
gi|380737098|gb|EIB98161.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea sp. Sc1]
Length = 213
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+EA P +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G
Sbjct: 105 LEAGFPGFNPDACLLNRYEPGAKLTLHQDKDEK----DMRQPIVSVSLGLPAVFQFGGFE 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V+LE GD++++GG SR +HG+ + P P + R NLTFR+
Sbjct: 161 RGDATQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LVGAWRYNLTFRR 211
>gi|417366562|ref|ZP_12138800.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
gi|353591586|gb|EHC49818.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|148547584|ref|YP_001267686.1| 2OG-Fe(II) oxygenase [Pseudomonas putida F1]
gi|148511642|gb|ABQ78502.1| DNA-N1-methyladenine dioxygenase [Pseudomonas putida F1]
Length = 225
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 222
>gi|417335023|ref|ZP_12118017.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353572926|gb|EHC36425.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|367476641|ref|ZP_09476017.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 285]
gi|365271054|emb|CCD88485.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 285]
Length = 217
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 72/156 (46%), Gaps = 27/156 (17%)
Query: 430 PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATG 489
P G P +PV F +L A + EA +PD C+ N Y
Sbjct: 87 PQSGQPWPAMPVLFRELAETAAR----------------EAGFAGFAPDACLINRYEPGA 130
Query: 490 KLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKS 549
K+ LHQD+DE D P+VS S+G A FL+G + ++ L GDV+++GG +
Sbjct: 131 KMSLHQDRDER----DVGAPIVSVSLGLPATFLFGGFKRTDKTQRYRLVHGDVVVWGGPA 186
Query: 550 RRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
R FHGV + E + R R+NLTFR+
Sbjct: 187 RLAFHGVAALADG-------EHALLGRQRINLTFRR 215
>gi|386011948|ref|YP_005930225.1| 2OG-Fe(II) oxygenase [Pseudomonas putida BIRD-1]
gi|313498654|gb|ADR60020.1| 2OG-Fe(II) oxygenase [Pseudomonas putida BIRD-1]
Length = 225
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 222
>gi|264676316|ref|YP_003276222.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni CNB-2]
gi|262206828|gb|ACY30926.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni CNB-2]
Length = 224
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y ++GLH+D+DE D P+VS S+G FL+G L +
Sbjct: 111 PGFAPDACLINRYQPGARMGLHRDQDEH----DFAAPIVSVSLGLPCRFLWGGLTRQSPT 166
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ L GDVL++GG SR +FHGV AP + + R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGPSRLVFHGV-------APLREGQHPLLGNERWNLTFR 211
>gi|205353382|ref|YP_002227183.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|375124223|ref|ZP_09769387.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|445128912|ref|ZP_21380523.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205273163|emb|CAR38124.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326628473|gb|EGE34816.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|444854567|gb|ELX79628.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|421887430|ref|ZP_16318589.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379982985|emb|CCF90862.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|167549745|ref|ZP_02343504.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|168242377|ref|ZP_02667309.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194450563|ref|YP_002046319.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|386592075|ref|YP_006088475.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417374601|ref|ZP_12144310.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|419728397|ref|ZP_14255362.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419734281|ref|ZP_14261174.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419737818|ref|ZP_14264588.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419746292|ref|ZP_14272880.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419750331|ref|ZP_14276793.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421570305|ref|ZP_16015997.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421576266|ref|ZP_16021869.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421578121|ref|ZP_16023703.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421585544|ref|ZP_16031041.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|194408867|gb|ACF69086.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|205325457|gb|EDZ13296.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205338631|gb|EDZ25395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|353599034|gb|EHC55314.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|381297939|gb|EIC39022.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381299451|gb|EIC40523.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381302771|gb|EIC43801.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381303839|gb|EIC44853.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381307205|gb|EIC48068.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383799119|gb|AFH46201.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402519064|gb|EJW26428.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402525161|gb|EJW32455.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402525698|gb|EJW32985.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402530020|gb|EJW37245.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|432466305|ref|ZP_19708394.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE205]
gi|432584468|ref|ZP_19820862.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE57]
gi|433073404|ref|ZP_20260059.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE129]
gi|433120810|ref|ZP_20306482.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE157]
gi|433183876|ref|ZP_20368127.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE85]
gi|430993889|gb|ELD10233.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE205]
gi|431115827|gb|ELE19321.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE57]
gi|431588115|gb|ELI59463.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE129]
gi|431642411|gb|ELJ10134.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE157]
gi|431706438|gb|ELJ71009.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE85]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLA-------GDCRYNLTFRQ 211
>gi|432802431|ref|ZP_20036410.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE84]
gi|431348220|gb|ELG35078.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE84]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|91211504|ref|YP_541490.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli UTI89]
gi|117624406|ref|YP_853319.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli APEC O1]
gi|218559130|ref|YP_002392043.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli S88]
gi|237704687|ref|ZP_04535168.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
sp. 3_2_53FAA]
gi|386600092|ref|YP_006101598.1| alkylated DNA repair protein AlkB [Escherichia coli IHE3034]
gi|386603765|ref|YP_006110065.1| 2OG-Fe(II) oxygenase [Escherichia coli UM146]
gi|386619833|ref|YP_006139413.1| Alkylated DNA repair protein [Escherichia coli NA114]
gi|387830147|ref|YP_003350084.1| DNA repair protein [Escherichia coli SE15]
gi|417085476|ref|ZP_11952904.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli cloneA_i1]
gi|419914466|ref|ZP_14432864.1| 2OG-Fe(II) oxygenase [Escherichia coli KD1]
gi|419947144|ref|ZP_14463504.1| 2OG-Fe(II) oxygenase [Escherichia coli HM605]
gi|422360350|ref|ZP_16440984.1| alkylated DNA repair protein AlkB [Escherichia coli MS 110-3]
gi|422749491|ref|ZP_16803403.1| alkylated DNA repair protein AlkB [Escherichia coli H252]
gi|422755636|ref|ZP_16809460.1| alkylated DNA repair protein AlkB [Escherichia coli H263]
gi|422837733|ref|ZP_16885706.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H397]
gi|432358557|ref|ZP_19601783.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE4]
gi|432363290|ref|ZP_19606457.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE5]
gi|432422560|ref|ZP_19665105.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE178]
gi|432500699|ref|ZP_19742456.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE216]
gi|432559463|ref|ZP_19796132.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE49]
gi|432574292|ref|ZP_19810772.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE55]
gi|432588540|ref|ZP_19824896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE58]
gi|432598199|ref|ZP_19834475.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE62]
gi|432695074|ref|ZP_19930273.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE162]
gi|432711264|ref|ZP_19946324.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE6]
gi|432755027|ref|ZP_19989577.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE22]
gi|432779152|ref|ZP_20013395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE59]
gi|432788099|ref|ZP_20022231.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE65]
gi|432821548|ref|ZP_20055240.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE118]
gi|432827680|ref|ZP_20061332.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE123]
gi|432895230|ref|ZP_20106950.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE165]
gi|432919677|ref|ZP_20123791.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE173]
gi|432927579|ref|ZP_20129008.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE175]
gi|432981641|ref|ZP_20170416.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE211]
gi|433005670|ref|ZP_20194099.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE227]
gi|433008253|ref|ZP_20196670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE229]
gi|433097083|ref|ZP_20283267.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE139]
gi|433106505|ref|ZP_20292480.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE148]
gi|433154332|ref|ZP_20339275.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE176]
gi|433164087|ref|ZP_20348825.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE179]
gi|433169192|ref|ZP_20353820.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE180]
gi|91073078|gb|ABE07959.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli UTI89]
gi|115513530|gb|ABJ01605.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli APEC O1]
gi|218365899|emb|CAR03641.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli S88]
gi|226901053|gb|EEH87312.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
sp. 3_2_53FAA]
gi|281179304|dbj|BAI55634.1| DNA repair protein [Escherichia coli SE15]
gi|294493322|gb|ADE92078.1| alkylated DNA repair protein AlkB [Escherichia coli IHE3034]
gi|307626249|gb|ADN70553.1| 2OG-Fe(II) oxygenase [Escherichia coli UM146]
gi|315285834|gb|EFU45274.1| alkylated DNA repair protein AlkB [Escherichia coli MS 110-3]
gi|323952006|gb|EGB47880.1| alkylated DNA repair protein AlkB [Escherichia coli H252]
gi|323955980|gb|EGB51733.1| alkylated DNA repair protein AlkB [Escherichia coli H263]
gi|333970334|gb|AEG37139.1| Alkylated DNA repair protein [Escherichia coli NA114]
gi|355351248|gb|EHG00440.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli cloneA_i1]
gi|371610642|gb|EHN99170.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H397]
gi|388386737|gb|EIL48377.1| 2OG-Fe(II) oxygenase [Escherichia coli KD1]
gi|388411452|gb|EIL71628.1| 2OG-Fe(II) oxygenase [Escherichia coli HM605]
gi|430877212|gb|ELC00668.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE4]
gi|430886509|gb|ELC09364.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE5]
gi|430944172|gb|ELC64271.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE178]
gi|431028276|gb|ELD41320.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE216]
gi|431090683|gb|ELD96434.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE49]
gi|431107890|gb|ELE12054.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE55]
gi|431120873|gb|ELE23871.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE58]
gi|431131066|gb|ELE33149.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE62]
gi|431233656|gb|ELF29243.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE162]
gi|431248944|gb|ELF43119.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE6]
gi|431302236|gb|ELF91424.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE22]
gi|431327305|gb|ELG14650.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE59]
gi|431337816|gb|ELG24904.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE65]
gi|431368395|gb|ELG54863.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE118]
gi|431372929|gb|ELG58591.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE123]
gi|431421597|gb|ELH03809.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE165]
gi|431443721|gb|ELH24747.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE173]
gi|431444102|gb|ELH25126.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE175]
gi|431490950|gb|ELH70557.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE211]
gi|431514657|gb|ELH92498.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE227]
gi|431523583|gb|ELI00720.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE229]
gi|431615431|gb|ELI84560.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE139]
gi|431627212|gb|ELI95623.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE148]
gi|431674222|gb|ELJ40405.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE176]
gi|431687392|gb|ELJ52943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE179]
gi|431688044|gb|ELJ53585.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE180]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGGHPLT-------TDCRYNLTFRQ 211
>gi|168261725|ref|ZP_02683698.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205349359|gb|EDZ35990.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|429087396|ref|ZP_19150128.1| Alkylated DNA repair protein AlkB [Cronobacter universalis NCTC
9529]
gi|426507199|emb|CCK15240.1| Alkylated DNA repair protein AlkB [Cronobacter universalis NCTC
9529]
Length = 116
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
A P +PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 9 AGYPDFTPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRN 64
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG SR +HG++ P + ++ R NLTFRQ
Sbjct: 65 DPLKRLLLEHGDVVVWGGPSRLFYHGIQ-------PLKAGQHSATGEYRYNLTFRQ 113
>gi|224823738|ref|ZP_03696847.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania ferrooxidans 2002]
gi|224604193|gb|EEG10367.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania ferrooxidans 2002]
Length = 215
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 450 AIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLP 509
A+ DS L+ + + EA P PD C+ N Y +L LHQDKDE D+ P
Sbjct: 93 AMPDSFRLLARDAAA----EAGFPGYEPDACLINRYVPGSRLSLHQDKDER----DQIAP 144
Query: 510 VVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLL 569
+VS S+G FL+G LR +++ L GDV+++GG +R +HGV + P LL
Sbjct: 145 IVSVSLGLPTLFLFGGLRREDKTQRIPLAHGDVVVWGGPARLRYHGVLPLKEGVHP--LL 202
Query: 570 EETSMRRGRLNLTFRQ 585
E R+NLTFR+
Sbjct: 203 GEQ-----RINLTFRK 213
>gi|404317830|ref|ZP_10965763.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ochrobactrum
anthropi CTS-325]
Length = 212
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y T P G + P +P F L A + EA P +PD C+ N
Sbjct: 76 RYSTDDPETGLLWPTMPDAFRALAQTAAR----------------EAGYPDFAPDACLIN 119
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y KL LHQDKDE D P+VS S+G A F +G L+ K IL GDV+
Sbjct: 120 RYEPGAKLSLHQDKDEQ----DFNNPIVSVSLGLPATFQFGGLKRTDPIAKYILHHGDVV 175
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++GG SR +HG+ + E + R NLTFR+
Sbjct: 176 VWGGPSRLFYHGILAL-------KRGEHEKLGPFRHNLTFRK 210
>gi|170767260|ref|ZP_02901713.1| alkylated DNA repair protein AlkB [Escherichia albertii TW07627]
gi|170123594|gb|EDS92525.1| alkylated DNA repair protein AlkB [Escherichia albertii TW07627]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P F L +A ++ G +D + PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFRDLCQQA---------AMAAGYRDFQ-------PDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE+ D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEA----DLRAPIVSVSLGLPAIFQFGGLKRSDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + T L + R NLTFRQ
Sbjct: 190 QPL--KTGFHPLTADC-----RYNLTFRQ 211
>gi|328545942|ref|YP_004306051.1| 2OG-Fe(II) oxygenase [Polymorphum gilvum SL003B-26A1]
gi|326415682|gb|ADZ72745.1| Oxidoreductase, 2OG-Fe(II) oxygenase family [Polymorphum gilvum
SL003B-26A1]
Length = 206
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 442 EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQ 501
EFH G+ D ++ ++ ++ P P+ C+ NFY ++GLHQD+DE
Sbjct: 74 EFHPETGRRWSDIPPVLLRLWA---EVAPAAPL--PEACLINFYEPGARMGLHQDRDE-- 126
Query: 502 ESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFP 561
E+ D PVVS S+GD+A F G L + L SGDV + +R FHG+++I
Sbjct: 127 ETFDA--PVVSVSLGDTAMFRIGGLSRKDRTASLRLASGDVAVLASTARLAFHGIDRILA 184
Query: 562 DTAPKSLLEETSMRRGRLNLTFRQ 585
T+ +LL+ GR+NLT R+
Sbjct: 185 GTS--TLLKAG----GRINLTLRR 202
>gi|384220473|ref|YP_005611639.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 6]
gi|354959372|dbj|BAL12051.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 6]
Length = 217
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G L ++
Sbjct: 116 FAPDACLVNRYEPGTRLSLHQDKDE----LDYSAPIVSVSLGLPATFLFGGLARSDKPRR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 172 FRLVHGDVVVWGGPSRLAYHGV-------APLADGEHALLGRQRINLTFRR 215
>gi|397697924|ref|YP_006535807.1| 2OG-Fe [Pseudomonas putida DOT-T1E]
gi|397334654|gb|AFO51013.1| 2OG-Fe [Pseudomonas putida DOT-T1E]
Length = 225
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 222
>gi|423109400|ref|ZP_17097095.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5243]
gi|376382134|gb|EHS94868.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5243]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G LR ++
Sbjct: 112 FTPDACLINRYQPGTKLSLHQDKDER----DLRAPIVSVSLGLPAIFQFGGLRRSDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGV----EKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG+ E + PDT R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKEGVHPDTG-----------SCRYNLTFR 210
>gi|218663391|ref|ZP_03519321.1| alkylated DNA repair protein [Rhizobium etli IE4771]
Length = 251
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE PVVS S+G+S F G L
Sbjct: 150 PEACLVNFYSDDARMGLHQDKDERNLQA----PVVSISLGNSCLFRVGGLSRNDRTLSFK 205
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I T+ +LL+ GR+NLT R+
Sbjct: 206 LSSGDLVVLGGEGRLCFHGVDRIHKATS--TLLKNG----GRINLTLRR 248
>gi|365850427|ref|ZP_09390891.1| putative alkylated DNA repair protein AlkB [Yokenella regensburgei
ATCC 43003]
gi|364567434|gb|EHM45102.1| putative alkylated DNA repair protein AlkB [Yokenella regensburgei
ATCC 43003]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D Y T P G+ P++P F + R + A
Sbjct: 64 CGARGWATDRHGYLYATQDPQTGSPWPVMPALF----------------RAFAVRAALAA 107
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y+ KL LHQDKDE+ P+VS S+G A F +G LR
Sbjct: 108 GYPDFRPDACLINRYAPATKLSLHQDKDEAT----LLAPIVSVSLGLPAIFQFGGLRRND 163
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
K+V+LE GDV+++GG SR +HG++ + P + R NLTFR
Sbjct: 164 PLKRVLLEHGDVVVWGGASRLFYHGIQPLKEGHHPLT-------DAFRYNLTFR 210
>gi|336251300|ref|YP_004595010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
aerogenes KCTC 2190]
gi|444350379|ref|YP_007386523.1| Alkylated DNA repair protein AlkB [Enterobacter aerogenes EA1509E]
gi|334737356|gb|AEG99731.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
aerogenes KCTC 2190]
gi|443901209|emb|CCG28983.1| Alkylated DNA repair protein AlkB [Enterobacter aerogenes EA1509E]
Length = 219
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+ ++
Sbjct: 112 FSPDACLINRYQPGAKLSLHQDKDER----DLRAPIVSVSLGLPAVFQFGGLKRNDPLRR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++LE GDV+++GG+SR +HG++ + P P + R NLTFR
Sbjct: 168 LLLEHGDVVVWGGESRLFYHGIQPLKPGEHPLT-------GACRYNLTFR 210
>gi|397164692|ref|ZP_10488147.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
radicincitans DSM 16656]
gi|396093840|gb|EJI91395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
radicincitans DSM 16656]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
+ I A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G
Sbjct: 102 KASIAAGYPEFRPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFG 157
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+ ++++LE GD++++GG+SR +HG+ AP R NLTFR
Sbjct: 158 GLKRNDPLQRLMLEHGDIVVWGGESRLFYHGI-------APLKAGYHPVTGECRYNLTFR 210
Query: 585 Q 585
Q
Sbjct: 211 Q 211
>gi|425305941|ref|ZP_18695652.1| alkylated DNA repair protein AlkB [Escherichia coli N1]
gi|408228566|gb|EKI52100.1| alkylated DNA repair protein AlkB [Escherichia coli N1]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFLPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------GDCRYNLTFRQ 211
>gi|283807198|pdb|3KHC|A Chain A, Crystal Structure Of Escherichia Coli Alkb In Complex With
Ssdna Containing A 1-Methylguanine Lesion
gi|283807199|pdb|3KHC|B Chain B, Crystal Structure Of Escherichia Coli Alkb In Complex With
Ssdna Containing A 1-Methylguanine Lesion
Length = 219
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 93 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 136
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
K E D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 137 KAEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 192
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 193 QPLKAGFHPLTI-------DCRYNLTFRQ 214
>gi|188533377|ref|YP_001907174.1| DNA repair system specific for alkylated DNA [Erwinia tasmaniensis
Et1/99]
gi|188028419|emb|CAO96280.1| DNA repair system specific for alkylated DNA [Erwinia tasmaniensis
Et1/99]
Length = 213
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG + D QY G P +P FH+L + + EA
Sbjct: 66 ALGWSADSRGYQYSAQDEFSGQGWPAMPQTFHRLAEECAR----------------EAGF 109
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
+PD C+ N Y KL LHQDKDE D P+VS S+G A FL+G
Sbjct: 110 AGFNPDACLINRYEPGAKLTLHQDKDER----DLRQPIVSVSLGLPAVFLFGGFERGDAT 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V+LE GDV+++GG SR +HG I P A L R NLTFR+
Sbjct: 166 QRVLLEHGDVVVWGGPSRLRYHG---ILPLKAGIHPLTGAF----RFNLTFRR 211
>gi|168236439|ref|ZP_02661497.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194735473|ref|YP_002115337.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|416421232|ref|ZP_11689345.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416434728|ref|ZP_11697852.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416437820|ref|ZP_11699029.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416442717|ref|ZP_11702478.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416449934|ref|ZP_11707078.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456086|ref|ZP_11711150.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416470368|ref|ZP_11718823.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416478770|ref|ZP_11721888.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416486136|ref|ZP_11725016.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416497030|ref|ZP_11729463.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416506962|ref|ZP_11735104.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416513917|ref|ZP_11738093.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530285|ref|ZP_11744851.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416532895|ref|ZP_11745904.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416544112|ref|ZP_11752681.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416554273|ref|ZP_11758181.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416557141|ref|ZP_11759323.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416567036|ref|ZP_11764163.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416575207|ref|ZP_11768299.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416582570|ref|ZP_11772769.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590214|ref|ZP_11777609.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596814|ref|ZP_11781629.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604074|ref|ZP_11785935.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611018|ref|ZP_11790511.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416617644|ref|ZP_11794270.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416630543|ref|ZP_11800792.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638584|ref|ZP_11804053.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649347|ref|ZP_11809820.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416657431|ref|ZP_11813689.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416665187|ref|ZP_11816512.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416674127|ref|ZP_11821195.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690273|ref|ZP_11825815.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416703545|ref|ZP_11829641.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711755|ref|ZP_11835535.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416715673|ref|ZP_11838312.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416722424|ref|ZP_11843356.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416730571|ref|ZP_11848710.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416740585|ref|ZP_11854508.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416751232|ref|ZP_11860042.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416754094|ref|ZP_11861118.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416760675|ref|ZP_11864963.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|416769282|ref|ZP_11870972.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|417384391|ref|ZP_12149782.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|417476461|ref|ZP_12170977.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|417532423|ref|ZP_12186809.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|418483333|ref|ZP_13052343.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418490273|ref|ZP_13056821.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418497053|ref|ZP_13063474.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418501788|ref|ZP_13068167.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418506124|ref|ZP_13072462.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418507728|ref|ZP_13074037.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418511594|ref|ZP_13077845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|418526291|ref|ZP_13092269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|194710975|gb|ACF90196.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197290530|gb|EDY29885.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|322617017|gb|EFY13923.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617677|gb|EFY14576.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624693|gb|EFY21522.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630242|gb|EFY27012.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322634423|gb|EFY31156.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639133|gb|EFY35825.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640130|gb|EFY36796.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645782|gb|EFY42306.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651557|gb|EFY47932.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656118|gb|EFY52417.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659470|gb|EFY55717.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665932|gb|EFY62115.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669830|gb|EFY65971.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673815|gb|EFY69912.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678573|gb|EFY74629.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322683631|gb|EFY79645.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687707|gb|EFY83677.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323196196|gb|EFZ81353.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198364|gb|EFZ83466.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204198|gb|EFZ89209.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212351|gb|EFZ97174.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218243|gb|EGA02953.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222999|gb|EGA07348.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227434|gb|EGA11599.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232238|gb|EGA16341.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235729|gb|EGA19813.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323241111|gb|EGA25147.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244853|gb|EGA28855.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248564|gb|EGA32495.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251584|gb|EGA35452.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323255016|gb|EGA38806.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323263089|gb|EGA46635.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268149|gb|EGA51626.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323270758|gb|EGA54196.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|353609067|gb|EHC62476.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|353640832|gb|EHC85712.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|353662782|gb|EHD01672.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|363551030|gb|EHL35351.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363554505|gb|EHL38741.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363561558|gb|EHL45674.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363567059|gb|EHL51067.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363568848|gb|EHL52814.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363579082|gb|EHL62880.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363579386|gb|EHL63177.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366054857|gb|EHN19200.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366061913|gb|EHN26157.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065859|gb|EHN30045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366066197|gb|EHN30372.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366066387|gb|EHN30556.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366080496|gb|EHN44465.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366084444|gb|EHN48352.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|366829103|gb|EHN55982.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372205847|gb|EHP19353.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAIFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|421520931|ref|ZP_15967593.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
LS46]
gi|402755541|gb|EJX16013.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
LS46]
Length = 215
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 212
>gi|416259885|ref|ZP_11640126.1| Alkylated DNA repair protein AlkB [Shigella dysenteriae CDC
74-1112]
gi|320177224|gb|EFW52232.1| Alkylated DNA repair protein AlkB [Shigella dysenteriae CDC
74-1112]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEPNLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|238895759|ref|YP_002920495.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402779737|ref|YP_006635283.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238548077|dbj|BAH64428.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402540673|gb|AFQ64822.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 217
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 166 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------DDCRYNLTFRQ 211
>gi|423115335|ref|ZP_17103026.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5245]
gi|376381421|gb|EHS94158.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5245]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G LR ++
Sbjct: 112 FTPDACLINRYQPGTKLSLHQDKDER----DLRAPIVSVSLGLPAIFQFGGLRRSDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGV----EKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG+ E + PDT R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKEGVHPDTG-----------SCRYNLTFR 210
>gi|213425960|ref|ZP_03358710.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
Length = 258
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|417286503|ref|ZP_12073792.1| alkylated DNA repair protein AlkB [Escherichia coli TW07793]
gi|386249962|gb|EII96131.1| alkylated DNA repair protein AlkB [Escherichia coli TW07793]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSGSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|152971171|ref|YP_001336280.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|262043275|ref|ZP_06016406.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|425075682|ref|ZP_18478785.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425082476|ref|ZP_18485573.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425086318|ref|ZP_18489411.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|449052086|ref|ZP_21732166.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae hvKP1]
gi|150956020|gb|ABR78050.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|259039374|gb|EEW40514.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|405594082|gb|EKB67505.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405600728|gb|EKB73893.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405605233|gb|EKB78299.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|448876039|gb|EMB11039.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae hvKP1]
Length = 217
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 166 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 211
>gi|204929206|ref|ZP_03220349.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|452123903|ref|YP_007474151.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|204321750|gb|EDZ06949.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|451912907|gb|AGF84713.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAIFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|366158426|ref|ZP_09458288.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
TW09308]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 452 QDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
Q R L ++ +T A P PD C+ N Y KL LHQDKDE D P+V
Sbjct: 94 QGFRDLCQRAATA-----AGYPDFQPDACLINRYVPGAKLSLHQDKDEP----DLRAPIV 144
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S S+G A F +G L+ K+++LE GDV+++GG+SR +HG++ + P +
Sbjct: 145 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQSLKAGFHPLT---- 200
Query: 572 TSMRRGRLNLTFRQ 585
R NLTFRQ
Sbjct: 201 ---ADCRYNLTFRQ 211
>gi|429116295|ref|ZP_19177213.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 701]
gi|426319424|emb|CCK03326.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 701]
Length = 123
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+ K++
Sbjct: 22 TPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLKRL 77
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+LE GDV+++GG SR +HG++ + P P + R NLTFRQ
Sbjct: 78 LLEHGDVVVWGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 120
>gi|126724642|ref|ZP_01740485.1| alkylated DNA repair protein, putative [Rhodobacterales bacterium
HTCC2150]
gi|126705806|gb|EBA04896.1| alkylated DNA repair protein, putative [Rhodobacteraceae bacterium
HTCC2150]
Length = 209
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
D + +Y T P PPI P +I D + + K P+
Sbjct: 72 DKQGYRYATKHPNGTKWPPIPPSIL------SIWDRVSGVSK---------------QPE 110
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILE 538
C+ NFY K+G+HQDKDE+ D PVVS S+GD A F G + L
Sbjct: 111 CCLINFYGQEAKMGMHQDKDEA----DFRWPVVSISLGDDARFRIGHENRGGKTQTATLR 166
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
SGDV++ GG +R HGV++I D LL + GR+NLT R
Sbjct: 167 SGDVMVMGGDARLKHHGVDRI--DFGTSLLLP----KGGRINLTLR 206
>gi|340000012|ref|YP_004730895.1| AlkB protein [Salmonella bongori NCTC 12419]
gi|339513373|emb|CCC31123.1| AlkB protein [Salmonella bongori NCTC 12419]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P P +P+ F + +A ++ G ++ +
Sbjct: 67 LGWTTDRHGYCYSACDPLTDKPWPALPLSFADVCRQA---------ALAAGYENFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y KL LHQDKDE D P+VS S+G +A F +G LR +
Sbjct: 114 ---PDACLINRYMPGAKLSLHQDKDEP----DLRAPIVSVSLGVAAIFQFGGLRRSDPLR 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|27378074|ref|NP_769603.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 110]
gi|27351220|dbj|BAC48228.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 110]
Length = 173
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y P G P +P F L +A + +
Sbjct: 24 CGERGWITDHTGYRYDPVDPRTGVPWPAMPPAFRDLARRAAE----------------QG 67
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G +
Sbjct: 68 GFTGFAPDACLVNRYEPGTRLSLHQDKDE----LDYAAPIVSVSLGLPATFLFGGMARSD 123
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 124 KPRRFRLVHGDVVVWGGASRLAYHGV-------APLADGEHALLGRQRINLTFRK 171
>gi|254491464|ref|ZP_05104643.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Methylophaga
thiooxidans DMS010]
gi|224462942|gb|EEF79212.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Methylophaga
thiooxydans DMS010]
Length = 212
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 80/197 (40%), Gaps = 41/197 (20%)
Query: 393 PGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
PGGF Y G D +Y T+ P P +P HQL
Sbjct: 51 PGGFKMAAQLTNCGKY------GWVTDSHGYRYQTTDPETNLSWPTMPELIHQLA----- 99
Query: 453 DSRALIEKISTGRKDIEAELPC----MSPDICIANFYSATGKLGLHQDKDESQESIDKCL 508
+EA C PD+C+ N Y +GLHQDKDE D
Sbjct: 100 ---------------LEAASACGFAHFKPDVCLINCYQPGAGMGLHQDKDEK----DFSA 140
Query: 509 PVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
P+VS S+G A FL+G + +L++GDV+++GG+ R FHGV+ P L
Sbjct: 141 PIVSVSLGVPAIFLFGGAKRQDKPSAYLLKNGDVVVWGGEDRLRFHGVQ-------PIKL 193
Query: 569 LEETSMRRGRLNLTFRQ 585
+ R NLT RQ
Sbjct: 194 AHHPMTGQKRFNLTIRQ 210
>gi|194446292|ref|YP_002041526.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|418805228|ref|ZP_13360816.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813955|ref|ZP_13369475.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418814439|ref|ZP_13369953.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418819404|ref|ZP_13374855.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418828637|ref|ZP_13383660.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418829336|ref|ZP_13384318.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418838547|ref|ZP_13393391.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418839235|ref|ZP_13394072.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847224|ref|ZP_13401986.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418852196|ref|ZP_13406901.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418856570|ref|ZP_13411212.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418858688|ref|ZP_13413300.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864993|ref|ZP_13419508.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|194404955|gb|ACF65177.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392772289|gb|EJA28990.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392784929|gb|EJA41510.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392789458|gb|EJA45972.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392794233|gb|EJA50656.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392794695|gb|EJA51087.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392796060|gb|EJA52410.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392804567|gb|EJA60724.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392808987|gb|EJA65034.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392812946|gb|EJA68921.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392815726|gb|EJA71662.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392819079|gb|EJA74952.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392829079|gb|EJA84760.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392831946|gb|EJA87571.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
Length = 216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P++S S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIISVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|365137349|ref|ZP_09344068.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella sp.
4_1_44FAA]
gi|363656213|gb|EHL94983.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella sp.
4_1_44FAA]
Length = 217
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 166 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 211
>gi|56412838|ref|YP_149913.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197361771|ref|YP_002141407.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|198242580|ref|YP_002216334.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|375119817|ref|ZP_09764984.1| AlkB protein [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|445147354|ref|ZP_21388110.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445157826|ref|ZP_21392970.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|56127095|gb|AAV76601.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197093247|emb|CAR58692.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197937096|gb|ACH74429.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|326624084|gb|EGE30429.1| AlkB protein [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|444844897|gb|ELX70123.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444845907|gb|ELX71089.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P++S S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIISVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|419154615|ref|ZP_13699178.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6C]
gi|377997197|gb|EHV60304.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6C]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++ G+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWDGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 190 QPLKAGFHPLTI-------DCRYNLTFRQ 211
>gi|432372889|ref|ZP_19615929.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE11]
gi|430895694|gb|ELC17949.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE11]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 452 QDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
Q R L ++ +T A P PD C+ N Y KL LHQDKDE D P+V
Sbjct: 94 QGFRDLCQRAATA-----AGYPDFQPDACLINRYVPGAKLSLHQDKDEP----DLRAPIV 144
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S S+G A F +G L+ K+++LE GDV+++GG+SR +HG++ + P +
Sbjct: 145 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT---- 200
Query: 572 TSMRRGRLNLTFRQ 585
R NLTFRQ
Sbjct: 201 ---ADCRYNLTFRQ 211
>gi|218700680|ref|YP_002408309.1| N1-methyladenine or N3-methylcytosine DNA lesion oxidative
demethylase [Escherichia coli IAI39]
gi|300936762|ref|ZP_07151656.1| alkylated DNA repair protein AlkB [Escherichia coli MS 21-1]
gi|386624908|ref|YP_006144636.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O7:K1 str. CE10]
gi|432680823|ref|ZP_19916197.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE143]
gi|218370666|emb|CAR18475.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli IAI39]
gi|300458124|gb|EFK21617.1| alkylated DNA repair protein AlkB [Escherichia coli MS 21-1]
gi|349738645|gb|AEQ13351.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O7:K1 str. CE10]
gi|431220220|gb|ELF17600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE143]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGGHPLT-------TDCRYNLTFRQ 211
>gi|386035788|ref|YP_005955701.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae KCTC 2242]
gi|419972761|ref|ZP_14488188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419977560|ref|ZP_14492859.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983324|ref|ZP_14498475.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989427|ref|ZP_14504403.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995466|ref|ZP_14510272.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420001622|ref|ZP_14516277.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420006474|ref|ZP_14520971.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420012294|ref|ZP_14526608.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018089|ref|ZP_14532287.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420023823|ref|ZP_14537838.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420031864|ref|ZP_14545683.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420037038|ref|ZP_14550695.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420040986|ref|ZP_14554484.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420046747|ref|ZP_14560066.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420052457|ref|ZP_14565638.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420060341|ref|ZP_14573341.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420063917|ref|ZP_14576728.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420069863|ref|ZP_14582517.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420075407|ref|ZP_14587883.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420081168|ref|ZP_14593478.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421910329|ref|ZP_16340117.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916875|ref|ZP_16346439.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424831579|ref|ZP_18256307.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424932514|ref|ZP_18350886.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425092548|ref|ZP_18495633.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|339762916|gb|AEJ99136.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae KCTC 2242]
gi|397350158|gb|EJJ43248.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397353901|gb|EJJ46968.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397355495|gb|EJJ48494.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397367233|gb|EJJ59845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397369550|gb|EJJ62150.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397371946|gb|EJJ64454.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397382183|gb|EJJ74346.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397386137|gb|EJJ78223.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390804|gb|EJJ82702.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399367|gb|EJJ91021.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397400059|gb|EJJ91705.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397406054|gb|EJJ97492.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397418520|gb|EJK09678.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397419304|gb|EJK10453.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397425359|gb|EJK16238.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433633|gb|EJK24277.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397434476|gb|EJK25111.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397442457|gb|EJK32808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397448500|gb|EJK38674.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397453473|gb|EJK43533.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405611774|gb|EKB84540.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407806701|gb|EKF77952.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410115828|emb|CCM82742.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120592|emb|CCM89064.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414709014|emb|CCN30718.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 217
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 110 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 166 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 211
>gi|418787821|ref|ZP_13343621.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794826|ref|ZP_13350542.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418800109|ref|ZP_13355773.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392760436|gb|EJA17273.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392762739|gb|EJA19553.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392765346|gb|EJA22134.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P++S S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIISVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|395235315|ref|ZP_10413530.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter sp.
Ag1]
gi|394730211|gb|EJF30103.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter sp.
Ag1]
Length = 213
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 425 YGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANF 484
Y P G P+IP F + +A SRA G D E PD C+ N
Sbjct: 78 YSPQDPLTGQGWPLIPEVFLSICHRA---SRA------AGYLDFE-------PDACLINR 121
Query: 485 YSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLI 544
Y+A KL LHQDKDE + P+VS S+G A F +G L+ ++++LE GDV++
Sbjct: 122 YAAGTKLSLHQDKDEP----NLRQPIVSVSLGLPAIFQFGGLQRGDPLQRIMLEHGDVVV 177
Query: 545 FGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+GG SR +HG+ + P P + + R NLTFR+
Sbjct: 178 WGGASRLFYHGILPLKPGFHPLT-------DQFRYNLTFRR 211
>gi|126738438|ref|ZP_01754143.1| alkylated DNA repair protein, putative [Roseobacter sp. SK209-2-6]
gi|126720237|gb|EBA16943.1| alkylated DNA repair protein, putative [Roseobacter sp. SK209-2-6]
Length = 205
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y K+GLHQDKDE+ D PVVS S+GD F G + + +
Sbjct: 105 PDCCLLNYYGEGAKMGLHQDKDEA----DFSYPVVSISLGDDGLFRIGGAQRGGKTESIW 160
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG++R +HGV++I ++ LL + GR+NLT R
Sbjct: 161 LNSGDVVVMGGEARLTYHGVDRIRYKSS--RLLPKG----GRINLTLR 202
>gi|190889680|ref|YP_001976222.1| alkylated DNA repair protein [Rhizobium etli CIAT 652]
gi|190694959|gb|ACE89044.1| alkylated DNA repair protein [Rhizobium etli CIAT 652]
Length = 203
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQD+DE PVVS S+G+S F G +
Sbjct: 102 PEACLVNFYSDEARMGLHQDRDERNLQA----PVVSISLGNSCLFRVGGVIRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I P T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|303279975|ref|XP_003059280.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459116|gb|EEH56412.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 440 PVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE 499
P H++V + ++ ++A D + +P M P + NFY + H+D ++
Sbjct: 5 PSRLHEIVLECVRAAQA---------ADSKRNVPDMRPTTALVNFYKEGARFKWHRDSED 55
Query: 500 SQES-IDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEK 558
+ + +D P+VSF++G SA+F Y + V L SGDVL+FGG +R I H V +
Sbjct: 56 PEVARVDAGPPIVSFTVGLSADFAYKRRFEDETHDVVRLNSGDVLLFGGPARMIVHSVTR 115
Query: 559 IFPDTAPKSLLEETSMRRGRLNLTFR 584
+ P T P L M GRLN+T R
Sbjct: 116 VVPRTMPPML--RGRMLHGRLNVTVR 139
>gi|218548327|ref|YP_002382118.1| oxidative demethylase [Escherichia fergusonii ATCC 35469]
gi|218355868|emb|CAQ88483.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia fergusonii ATCC 35469]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 107 AGYPDFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLKRN 162
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+++LE GDV+++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 163 DPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT-------ADCRYNLTFRQ 211
>gi|378580368|ref|ZP_09829026.1| alkylated DNA repair protein [Pantoea stewartii subsp. stewartii
DC283]
gi|377817177|gb|EHU00275.1| alkylated DNA repair protein [Pantoea stewartii subsp. stewartii
DC283]
Length = 213
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G
Sbjct: 106 EAGFPAFNPDACLINRYEPGAKLTLHQDKDEK----DLLQPIVSVSLGLPAVFQFGGFER 161
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A++V+LE GDV+++GG SR +HG+ + P + R NLTFR+
Sbjct: 162 SDQAQRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLT-------GAFRYNLTFRR 211
>gi|417350216|ref|ZP_12128659.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353570709|gb|EHC34897.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
Length = 123
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 12 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAIFQFGGLR 67
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 68 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 118
>gi|213417574|ref|ZP_03350716.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 257
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|365890377|ref|ZP_09428911.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3809]
gi|365333760|emb|CCE01442.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3809]
Length = 194
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
D +Y P G P +P F +L A EA +PD
Sbjct: 53 DRSGYRYDAVDPESGRPWPAMPPLFRKLAENAAG----------------EAGFAGFAPD 96
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILE 538
C+ N Y K+ LHQD+DE ID P+VS S+G A FL+G L+ ++ L
Sbjct: 97 ACLINRYEPGAKMSLHQDRDE--RDIDA--PIVSVSLGLPATFLFGGLKRTDKTQRHRLV 152
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GDV+++GG +R FHGV AP + E + R R+NLTFR+
Sbjct: 153 HGDVVVWGGPARLAFHGV-------APLADGEHARLGRRRINLTFRR 192
>gi|116696312|ref|YP_841888.1| alkylated DNA repair protein [Ralstonia eutropha H16]
gi|113530811|emb|CAJ97158.1| Alkylated DNA repair protein [Ralstonia eutropha H16]
Length = 220
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G +R ++V
Sbjct: 121 PDACLINRYEPGTRLSLHQDRDER----DFSAPIVSVSLGLPAVFLFGGMRRADRPQRVR 176
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR FHGV AP + + + R R+NLTFR+
Sbjct: 177 LAHGDVVVWGGPSRLAFHGV-------APLADGDHPLLGRLRINLTFRK 218
>gi|422830098|ref|ZP_16878259.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B093]
gi|371606916|gb|EHN95503.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B093]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLA-------GDCRYNLTFRQ 211
>gi|417159712|ref|ZP_11996740.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0741]
gi|386175163|gb|EIH47155.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0741]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+ R +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGELRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|417324884|ref|ZP_12111021.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353577770|gb|EHC39831.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P P +P+ F + +A I+ G + +
Sbjct: 67 LGWTTDRHGYCYAVRDPLTDKPWPALPLSFASVCRQA---------AIAAGYESFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P++S S+G A F +G LR +
Sbjct: 114 ---PDACLINRYAPGAKLSLHQDKDEP----DLRAPIISVSLGVPAVFQFGGLRRSDPIQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|389808166|ref|ZP_10204576.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
thiooxydans LCS2]
gi|388443044|gb|EIL99203.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
thiooxydans LCS2]
Length = 218
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQD+DE D LP+VS S+G A FL+G L+
Sbjct: 114 FPGFVPDACLLNRYEPGTRLSLHQDRDER----DLGLPIVSASLGIPAVFLFGGLQRTDP 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG +R FHGV + P+ P ++ R+NL+FR+
Sbjct: 170 VQRVPLAHGDVVVWGGAARLRFHGVLPLKPNHHP-------ALGECRINLSFRR 216
>gi|339323627|ref|YP_004682521.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
N-1]
gi|338170235|gb|AEI81289.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
N-1]
Length = 220
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G +R ++V
Sbjct: 121 PDACLINRYEPGTRLSLHQDRDER----DFSAPIVSVSLGLPAVFLFGGMRRADRPQRVR 176
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR FHGV AP + + + R R+NLTFR+
Sbjct: 177 LAHGDVVVWGGPSRLAFHGV-------APLADGDHPLLGRLRINLTFRK 218
>gi|390435232|ref|ZP_10223770.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea agglomerans
IG1]
Length = 213
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G
Sbjct: 106 EAGFPGFNPDACLLNRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPAVFQFGGFER 161
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ ++V+LE GD++++GG SR +HG+ + P P + R NLTFR+
Sbjct: 162 GDSTQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LVGAWRYNLTFRR 211
>gi|417138880|ref|ZP_11982407.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0259]
gi|417308678|ref|ZP_12095520.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
PCN033]
gi|338769711|gb|EGP24489.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
PCN033]
gi|386157525|gb|EIH13865.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0259]
Length = 216
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPEIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|421850913|ref|ZP_16283851.1| DNA-N1-methyladenine dioxygenase [Acetobacter pasteurianus NBRC
101655]
gi|371458238|dbj|GAB29054.1| DNA-N1-methyladenine dioxygenase [Acetobacter pasteurianus NBRC
101655]
Length = 197
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 402 RDGANLYLKMM-CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALI 458
R G + + M+ C W D +Y S P G P P F L +A Q+
Sbjct: 36 RGGKRMSVAMLNCGPLGWVSDRSGYRYTASDPLTGKAWPAFPPLFLDLAARAAQE----- 90
Query: 459 EKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDS 518
G +D PD C+ N Y +L LHQD DE D P+VS S+G
Sbjct: 91 ----MGFQDF-------VPDACLINRYQPGARLSLHQDMDEQ----DHVAPIVSVSLGLP 135
Query: 519 AEFLYGDL-RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG 577
A FL+G L R++ A+ + GDV+++GG SR IFHGV+ + P +
Sbjct: 136 ATFLWGGLHRNMRPARHQVFH-GDVVVWGGPSRMIFHGVDVLKDGFHPATGTV------- 187
Query: 578 RLNLTFRQ 585
R NLTFR+
Sbjct: 188 RFNLTFRK 195
>gi|422031574|ref|ZP_16377732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427551469|ref|ZP_18928224.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427661818|ref|ZP_18957171.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414018247|gb|EKT01911.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414019357|gb|EKT02972.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414052121|gb|EKT34188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
Length = 216
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR ++
Sbjct: 112 FQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLRRSDPIQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 168 ILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|295687461|ref|YP_003591154.1| 2OG-Fe(II) oxygenase [Caulobacter segnis ATCC 21756]
gi|295429364|gb|ADG08536.1| 2OG-Fe(II) oxygenase [Caulobacter segnis ATCC 21756]
Length = 203
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y ++GLHQD+DE +D PV+S S+GD+A F G
Sbjct: 99 PETPPDSCLVNLYRGEARMGLHQDRDE----VDPSFPVLSISLGDTAVFRIGGTHRKDPT 154
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + L SGDV G +R FHGV++I P ++ SL+ GR+NLT R+
Sbjct: 155 RSLRLSSGDVCRLSGPARLAFHGVDRILPGSS--SLVPGG----GRINLTLRR 201
>gi|119898584|ref|YP_933797.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
gi|119670997|emb|CAL94910.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
Length = 221
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P A P +P F +L +A D A
Sbjct: 70 CGALGWVSDATGYRYAPLDPARDAPWPAMPAAFLELARQAAAD----------------A 113
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y+ +L LHQD++E D P+VS S+G A F +G LR
Sbjct: 114 GFPAFEPDACLVNRYAPGARLSLHQDRNEH----DFSQPIVSVSLGLPAAFQFGGLRRGD 169
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ +LE GDV+++GG +R +HGV + E + R+NLTFR+
Sbjct: 170 PVTRYLLEHGDVVVWGGPARLRYHGVLALKDG-------EHAATGACRINLTFRR 217
>gi|347761660|ref|YP_004869221.1| DNA repair protein for alkylated DNA [Gluconacetobacter xylinus
NBRC 3288]
gi|347580630|dbj|BAK84851.1| DNA repair protein for alkylated DNA [Gluconacetobacter xylinus
NBRC 3288]
Length = 227
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD+C+ N Y ++GLHQD+DE ++ PVVS S G A FL+G L+ +++
Sbjct: 128 PDVCLINGYRPGARMGLHQDRDERLDA-----PVVSLSFGLPALFLWGGLKRTDACRRIP 182
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +FH + AP E R NLTFR+
Sbjct: 183 LLHGDVVVWGGPSRLVFHAI-------APLRAGEHPVTGPCRYNLTFRR 224
>gi|308187567|ref|YP_003931698.1| alpha-ketoglutarate-dependent dioxygenase alkB [Pantoea vagans
C9-1]
gi|308058077|gb|ADO10249.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Pantoea vagans
C9-1]
Length = 213
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G
Sbjct: 106 EAGFPDFNPDACLLNRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPAVFQFGGFER 161
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V+LE GD++++GG SR +HG+ + P P + R NLTFR+
Sbjct: 162 GDTTQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHPLA-------GPWRYNLTFRR 211
>gi|26990114|ref|NP_745539.1| 2OG-Fe(II) oxygenase [Pseudomonas putida KT2440]
gi|24985046|gb|AAN69003.1|AE016532_5 alkylated DNA repair protein AlkB [Pseudomonas putida KT2440]
Length = 215
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG R FHGV I P P+ + R+NLT R+
Sbjct: 171 LSHGDVLVWGGVDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 212
>gi|185177845|pdb|3BKZ|A Chain A, X-Ray Structure Of E Coli Alkb Crosslinked To Dsdna In The
Active Site
Length = 201
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 77 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 120
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
K E D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 121 KCEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 176
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P ++ R NLTFRQ
Sbjct: 177 QPLKAGFHPLTI-------DCRYNLTFRQ 198
>gi|383773288|ref|YP_005452354.1| alkylated DNA repair protein [Bradyrhizobium sp. S23321]
gi|381361412|dbj|BAL78242.1| alkylated DNA repair protein [Bradyrhizobium sp. S23321]
Length = 217
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y P GA P++P L A + +
Sbjct: 68 CGERGWITDHTGYRYDPIDPKTGAPWPVMPPVLRDLARHAAE----------------QG 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G +
Sbjct: 112 GFAGFAPDACLVNRYEPGTRLSLHQDKDE----LDYSAPIVSVSLGLPATFLFGGMARND 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 168 KPRRFRLVHGDVVVWGGASRLAYHGV-------APLADGEHPLLGRKRINLTFRR 215
>gi|170682238|ref|YP_001744406.1| alkylated DNA repair protein AlkB [Escherichia coli SMS-3-5]
gi|170519956|gb|ACB18134.1| alkylated DNA repair protein AlkB [Escherichia coli SMS-3-5]
Length = 216
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A + G D + PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRA---------ATAGGYPDFQ-------PDACLINRYVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLA-------GDCRYNLTFRQ 211
>gi|21328693|gb|AAM48699.1| DNA alkylation damage repair protein AlkB, putative [uncultured
marine proteobacterium]
Length = 212
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY ++GLHQD+DE+ PVVS S+GD A F G + +
Sbjct: 112 PECCLVNFYGDGARMGLHQDRDEANFD----WPVVSISLGDDALFRVGGTERGGKTESIW 167
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+SGDV + GG +R +HG+++I SLL+E GRLN+T R
Sbjct: 168 LQSGDVAVMGGAARLNYHGIDRI--KFGSSSLLKEG----GRLNVTLR 209
>gi|374574271|ref|ZP_09647367.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM471]
gi|374422592|gb|EHR02125.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM471]
Length = 217
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G + ++
Sbjct: 116 FAPDACLVNRYEPGTRLSLHQDKDE----LDYSAPIVSVSLGLPATFLFGGMARSDKPRR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 172 FRLVHGDVVVWGGPSRLAYHGV-------APLADGEHALLGRKRVNLTFRK 215
>gi|339022224|ref|ZP_08646184.1| DNA repair protein for alkylated DNA [Acetobacter tropicalis NBRC
101654]
gi|338750771|dbj|GAA09488.1| DNA repair protein for alkylated DNA [Acetobacter tropicalis NBRC
101654]
Length = 216
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y + P + V P +P + +L ++ + + G K
Sbjct: 66 ALGWVTDRNGYRYTPTDPLNNQVWPPLPPAWQKLATRSAE---------AAGFKGFH--- 113
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P+ C+ N Y ++ LHQDKDE D P+VS S+G FL+G L+ +
Sbjct: 114 ----PNACLINRYEPGTRMALHQDKDEG----DFSQPIVSVSLGLPISFLWGGLKRSTSP 165
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++LE GDVL++GGK+R +HGV+ + P + R R NLTFR
Sbjct: 166 HAILLEHGDVLVWGGKARLHYHGVKPLADGLHPVT-------GRVRFNLTFR 210
>gi|163857244|ref|YP_001631542.1| hypothetical protein Bpet2932 [Bordetella petrii DSM 12804]
gi|163260972|emb|CAP43274.1| alkB [Bordetella petrii]
Length = 216
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQDK+E D P+VS S+G +A FL+G R +A++V
Sbjct: 117 PDACLVNRYAPGARMSLHQDKNER----DFSAPIVSVSLGIAAVFLFGGSRRGDSARRVP 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDV+++GG R +HGV + T P+ + R+NLTFRQ
Sbjct: 173 LQHGDVVVWGGPDRLRYHGVLPLKDATHPR-------LGAARVNLTFRQ 214
>gi|440224931|ref|YP_007332022.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhizobium tropici
CIAT 899]
gi|440036442|gb|AGB69476.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhizobium tropici
CIAT 899]
Length = 202
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFY ++GLHQD DE PV+S S+G++ F G L
Sbjct: 101 PEACLVNFYGNDARMGLHQDCDEQNLKA----PVLSVSLGNTCLFRVGGLNRNDRTLSFK 156
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I+P T+ +LL+ GR+NLT R+
Sbjct: 157 LASGDIVVLGGEGRLCFHGVDRIYPATS--TLLKNG----GRINLTLRR 199
>gi|294769214|gb|ADF36486.1| caffeine degradation related protein [Pseudomonas putida]
Length = 219
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 119 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG R FHGV I P P+ + R+NLT R+
Sbjct: 175 LSHGDVLVWGGVDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 216
>gi|283786025|ref|YP_003365890.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Citrobacter rodentium ICC168]
gi|282949479|emb|CBG89092.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Citrobacter rodentium ICC168]
Length = 216
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G+ P P F L +A A P
Sbjct: 67 LGWTTDRRGYLYSAIDPLTGSAWPPFPAAFVDLCQRAA----------------TAAGYP 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+ +
Sbjct: 111 DFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAVFQFGGLKRNDPLQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 167 RILLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT-------GDCRYNLTFR 210
>gi|86136819|ref|ZP_01055397.1| alkylated DNA repair protein, putative [Roseobacter sp. MED193]
gi|85826143|gb|EAQ46340.1| alkylated DNA repair protein, putative [Roseobacter sp. MED193]
Length = 200
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N++ K+GLHQDKDE+ D PVVS S+GD F GD + +
Sbjct: 100 PDSCLLNYFGPDAKMGLHQDKDEA----DFSFPVVSISLGDDGLFRMGDTQRGGKTDSIW 155
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG +R +HGV++I ++ LL + GR+NLT R
Sbjct: 156 LNSGDVVVMGGAARLAYHGVDRIRFQSS--RLLPKG----GRINLTLR 197
>gi|452912036|ref|ZP_21960694.1| Alkylated DNA repair protein AlkB [Kocuria palustris PEL]
gi|452832806|gb|EME35629.1| Alkylated DNA repair protein AlkB [Kocuria palustris PEL]
Length = 289
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 36/261 (13%)
Query: 345 NPSLLVTNRQKRNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDG 404
P L R+ R + + ++ W E+ ++V CR G G
Sbjct: 15 GPELFDLPREARE-----VAPGAVHVPDWLSTQEQAELVAQCRGWSRGDHRMRHYTTSTG 69
Query: 405 ANLYLKMMCLGKNWDPETSQYGTSRPTDGAVP-------PIIPVEFHQLVGKAIQDSRAL 457
+ ++ LG+ W+ + S P GA P G D A+
Sbjct: 70 GVMSVQSTVLGRTWELPWAPT-ISSPERGAAAGEPKSPRPASGDRRAAAEGSTPDDEAAV 128
Query: 458 IEKIST-----GRKDIEA-------ELPCMSPDICIANFYSATGKLGLHQDKDESQESID 505
+++ GR+ + A E P + N+Y A+ ++G HQD DE+
Sbjct: 129 GQRLPEALWHLGRRGVAAAYGEEAPEASSFEPTTALVNYYDASARMGQHQDLDEAGPE-- 186
Query: 506 KCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILESGDVLIFGGKSRRIFHGVEKIFPDTA 564
P+VS S+GDS F G+ + ++L SGD+ +FG +SR FHGV I P T
Sbjct: 187 ---PIVSLSLGDSCIFRLGNTESRGRPYQDIVLRSGDLFVFGRQSRWAFHGVPAIRPGTG 243
Query: 565 PKSLLEETSMRR-GRLNLTFR 584
+L +R GRLN+T R
Sbjct: 244 DPAL----GLRHGGRLNITIR 260
>gi|254510523|ref|ZP_05122590.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacteraceae
bacterium KLH11]
gi|221534234|gb|EEE37222.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacteraceae
bacterium KLH11]
Length = 200
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y K+GLHQDKDE+ D PV+S S+GD A F G+ + +
Sbjct: 100 PDCCLINYYGEGTKMGLHQDKDEA----DFSWPVLSISLGDDALFRIGNTTRGGKTESIW 155
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV+I GG +R +HGV++I LL + GR+NLT R
Sbjct: 156 LSSGDVVIMGGPARLAYHGVDRI--RFGSSRLLPKG----GRINLTLR 197
>gi|154244303|ref|YP_001415261.1| 2OG-Fe(II) oxygenase [Xanthobacter autotrophicus Py2]
gi|154158388|gb|ABS65604.1| 2OG-Fe(II) oxygenase [Xanthobacter autotrophicus Py2]
Length = 218
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
+ C+ N+Y ++ LHQD+DE+ D PV+S S+GD+A F G + + L
Sbjct: 116 EACLINYYGPDARMSLHQDRDEA----DFTAPVLSLSLGDTALFRIGGETRGGATRSIRL 171
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+ + G SR FHG+++I P T+ +LL E GR NLT R+
Sbjct: 172 SSGDIFLLSGPSRLAFHGIDRILPGTS--TLLPEG----GRFNLTLRR 213
>gi|420379233|ref|ZP_14878721.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 225-75]
gi|391305387|gb|EIQ63173.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 225-75]
Length = 216
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE P+VS S+G A F +G L+ K+++LE GD++++GG+SR +HG+
Sbjct: 134 KDEPNLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDMVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|422018113|ref|ZP_16364670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
alcalifaciens Dmel2]
gi|414104405|gb|EKT65970.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
alcalifaciens Dmel2]
Length = 213
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y + P P++P F QL A + +A
Sbjct: 61 CGDWGWVTDHHGYRYSSIDPNTQQAWPLMPALFKQLSINAAE----------------KA 104
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
SPD C+ N Y K+ LHQDKDE+ D P+VSFS+G A F +G
Sbjct: 105 GFGGFSPDACLINRYGVGAKMSLHQDKDEA----DFSQPIVSFSLGLPAIFDFGGSTREH 160
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K + LE GDV ++GG+SR +HGV I P+ R NLTFR+
Sbjct: 161 PRKSIELEHGDVFVWGGRSRLNYHGVRHIKSGVHPQ-------FGAYRFNLTFRR 208
>gi|331647867|ref|ZP_08348959.1| alkylated DNA repair protein AlkB [Escherichia coli M605]
gi|432398040|ref|ZP_19640821.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE25]
gi|432407268|ref|ZP_19649977.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE28]
gi|432723664|ref|ZP_19958584.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE17]
gi|432728251|ref|ZP_19963130.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE18]
gi|432741945|ref|ZP_19976664.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE23]
gi|432991252|ref|ZP_20179916.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE217]
gi|433111463|ref|ZP_20297328.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE150]
gi|331043591|gb|EGI15729.1| alkylated DNA repair protein AlkB [Escherichia coli M605]
gi|430916144|gb|ELC37222.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE25]
gi|430930027|gb|ELC50536.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE28]
gi|431266218|gb|ELF57780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE17]
gi|431273940|gb|ELF65014.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE18]
gi|431283636|gb|ELF74495.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE23]
gi|431495334|gb|ELH74920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE217]
gi|431628767|gb|ELI97143.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE150]
Length = 216
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRYVPGVKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGGHPLT-------TDCRYNLTFRQ 211
>gi|407939004|ref|YP_006854645.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
KKS102]
gi|407896798|gb|AFU46007.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
KKS102]
Length = 217
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 34/171 (19%)
Query: 415 GKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPC 474
G +DP Q G S PT +P+ F QL +A + A
Sbjct: 79 GYRYDPIDPQTGQSWPT-------MPLLFRQLAREAAE----------------TAGFAG 115
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y+ +L LHQD+DE + P+VS S+G A FL+G + ++
Sbjct: 116 FAPDACLINRYAPGARLSLHQDRDEG----NYAHPIVSVSLGVPAMFLWGGAQRADKTRR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG +R FHGV + P++ T R+NLTFR+
Sbjct: 172 IALLHGDVVVWGGPARLRFHGVLPL-----PEAHHPLTGAH--RINLTFRK 215
>gi|422644851|ref|ZP_16707988.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330958402|gb|EGH58662.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 228
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y T+ P +G P +P F QL A +RA A P
Sbjct: 79 LGWITDRHGYRYSTTDPQNGRPWPAMPDVFMQLAQNA---ARA-------------AGYP 122
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQD+DE D PVVS S+G A F +G + +
Sbjct: 123 GFIPDACLINRYIPGAKMSLHQDRDEH----DHQWPVVSVSLGIPAIFQFGGMLRSDKPQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAGHPLLGEQ-----RINLTFRK 223
>gi|417512118|ref|ZP_12176540.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353640863|gb|EHC85736.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 115
Score = 78.6 bits (192), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 4 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 59
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 60 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 110
>gi|254463758|ref|ZP_05077169.1| 2OG-Fe(II) oxygenase [Rhodobacterales bacterium Y4I]
gi|206684666|gb|EDZ45148.1| 2OG-Fe(II) oxygenase [Rhodobacterales bacterium Y4I]
Length = 200
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N+Y ++GLHQDKDE+ D PVVS S+GD F G+ + V
Sbjct: 100 PECCLLNYYGEGARMGLHQDKDEA----DFSFPVVSISLGDEGLFRIGNRTRGGKTESVW 155
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG++R ++HGV++I ++ LL + GR+NLT R
Sbjct: 156 LSSGDVVVMGGEARLMYHGVDRIRFKSS--RLLPKG----GRINLTLR 197
>gi|94312699|ref|YP_585908.1| alpha-ketoglutarate-dependent dioxygenase alkB [Cupriavidus
metallidurans CH34]
gi|93356551|gb|ABF10639.1| alkylated DNA repair protein alk [Cupriavidus metallidurans CH34]
Length = 194
Score = 78.6 bits (192), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y T P G P++P F +L +A ++ G D E
Sbjct: 48 LGWTTDRRGYRYTTVDPDTGKPWPVMPEVFFRLANEAAAEA---------GFDDFE---- 94
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y +L LHQDK+E P+VS S+G A FL+G A
Sbjct: 95 ---PDACLLNRYLPGSRLALHQDKNEQAYET----PIVSVSLGMRATFLFGGHARTAPTI 147
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
KV L GDV+++GG R +HGV I AP +LL R+N TFR+
Sbjct: 148 KVPLHHGDVVVWGGADRLRYHGVMPI--KDAPHALLGSQ-----RINFTFRK 192
>gi|262194984|ref|YP_003266193.1| 2OG-Fe(II) oxygenase [Haliangium ochraceum DSM 14365]
gi|262078331|gb|ACY14300.1| 2OG-Fe(II) oxygenase [Haliangium ochraceum DSM 14365]
Length = 219
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 458 IEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGD 517
I ++ + + A+ P + P+ C+ N Y +LG+H D+DE PVVS S+G
Sbjct: 95 IPPLAMAQWNRFADWP-VRPEACLVNLYQTGSRLGMHVDQDERAADA----PVVSISLGC 149
Query: 518 SAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG 577
A + G +++++L SGDV++ GG +RR +HGV++I T+P LE
Sbjct: 150 DAVYRLGGHTRNLPSQRLLLRSGDVVVLGGAARRCYHGVDRIVAGTSPLPELE------A 203
Query: 578 RLNLTFRQ 585
R+NLT R+
Sbjct: 204 RINLTLRR 211
>gi|437897899|ref|ZP_20849640.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435322268|gb|ELO94575.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
Length = 142
Score = 78.6 bits (192), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 31 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 86
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 87 RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 137
>gi|291618152|ref|YP_003520894.1| AlkB [Pantoea ananatis LMG 20103]
gi|378766427|ref|YP_005194889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea ananatis
LMG 5342]
gi|386016480|ref|YP_005934767.1| alkylated DNA repair protein AlkB [Pantoea ananatis AJ13355]
gi|386078649|ref|YP_005992174.1| alkylated DNA repair protein AlkB [Pantoea ananatis PA13]
gi|291153182|gb|ADD77766.1| AlkB [Pantoea ananatis LMG 20103]
gi|327394549|dbj|BAK11971.1| alkylated DNA repair protein AlkB [Pantoea ananatis AJ13355]
gi|354987830|gb|AER31954.1| alkylated DNA repair protein AlkB [Pantoea ananatis PA13]
gi|365185902|emb|CCF08852.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea ananatis
LMG 5342]
Length = 213
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y KL LHQDKDE D P+VS S+G +A F +G
Sbjct: 106 EAGFPGFNPDACLVNRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLAAVFQFGGFER 161
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+A++V+LE GDV+++GG SR +HG+ + P + R NLTFR+
Sbjct: 162 GDHAQRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLT-------GAFRYNLTFRR 211
>gi|293410575|ref|ZP_06654151.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471043|gb|EFF13527.1| conserved hypothetical protein [Escherichia coli B354]
Length = 216
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A + G D ++ D C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRA---------ATAAGYPDFQS-------DACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|420336881|ref|ZP_14838453.1| alkylated DNA repair protein AlkB [Shigella flexneri K-315]
gi|391261384|gb|EIQ20432.1| alkylated DNA repair protein AlkB [Shigella flexneri K-315]
Length = 216
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHDLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GD +++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDEVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKAGFHPLT-------TDCRYNLTFRQ 211
>gi|218508080|ref|ZP_03505958.1| alkylated DNA repair protein [Rhizobium etli Brasil 5]
Length = 203
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ NFYS ++GLHQDKDE PVVS S+G+S F G L
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDERNLQA----PVVSISLGNSCLFRVGGLTRNDRTLSFK 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++ GG+ R FHGV++I T+ +LL+ GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHRATS--TLLKNG----GRINLTLRR 200
>gi|209966121|ref|YP_002299036.1| alkylated DNA repair protein [Rhodospirillum centenum SW]
gi|209959587|gb|ACJ00224.1| alkylated DNA repair protein, putative [Rhodospirillum centenum SW]
Length = 207
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 13/128 (10%)
Query: 461 ISTGRKDIEAELPCMS--PDICIANFYSATG-KLGLHQDKDESQESIDKCLPVVSFSIGD 517
I D+ AEL P C+ N Y G +LGLH+D+DE E+ D P+++ S+GD
Sbjct: 85 IPAALLDLWAELAGWPQPPQCCLVNLYRGGGARLGLHRDEDE--EAADA--PILNVSLGD 140
Query: 518 SAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRG 577
+A F G + + ++ SG V++F G++R FHGV++I P ++ +LL E G
Sbjct: 141 TAVFRLGGRQRGDPTRSFLVPSGTVMVFAGEARAAFHGVDRILPGSS--ALLPEG----G 194
Query: 578 RLNLTFRQ 585
RLNLT R+
Sbjct: 195 RLNLTLRR 202
>gi|56460357|ref|YP_155638.1| alkylated DNA repair protein [Idiomarina loihiensis L2TR]
gi|56179367|gb|AAV82089.1| Alkylated DNA repair protein [Idiomarina loihiensis L2TR]
Length = 217
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P G P IP ++ KA Q SR A
Sbjct: 68 CGSYGWLSDKHGYRYQNIDPVTGQPWPDIP---QSILVKATQVSRL-------------A 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y+ K+GLHQDK+E+ D P+VSFS G F++G +
Sbjct: 112 GFQNFQPDSCLINVYTPGAKMGLHQDKNEA----DFSKPIVSFSFGLPITFMWGGFKRSD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+K L+ D L++GGK R +HGV+++ P + R R+NLT RQ
Sbjct: 168 KYQKFSLQHADALVWGGKDRLRYHGVQQLKEAMHPLT-------GRCRVNLTIRQ 215
>gi|385788858|ref|YP_005819967.1| DNA repair system specific for alkylated DNA [Erwinia sp. Ejp617]
gi|310768130|gb|ADP13080.1| DNA repair system specific for alkylated DNA [Erwinia sp. Ejp617]
Length = 213
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG + D QY G P +P +F QL + EA
Sbjct: 67 LGWSTDSRGYQYSAQDEASGQRWPAMPPQFRQLAQECAG----------------EAGFS 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y K+ LHQDKDE D P+VS S+G A FL+G ++
Sbjct: 111 GFNPDACLINRYEPGAKMTLHQDKDER----DLRQPIVSVSLGLPAVFLFGGFERGDASQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GDV+++GG SR +HG I P A L R NLTFR+
Sbjct: 167 RVLLEHGDVVVWGGPSRLRYHG---ILPLKAGIHPLAGAF----RFNLTFRR 211
>gi|444309397|ref|ZP_21145035.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ochrobactrum
intermedium M86]
gi|443487264|gb|ELT50028.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ochrobactrum
intermedium M86]
Length = 212
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y T P G P +P F L A EA
Sbjct: 63 CGNFGWVTDRSGYRYSTDDPETGLPWPAMPEAFRTLARTAAG----------------EA 106
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 107 GYPDFVPDACLINRYEPGAKLSLHQDKDEQ----DFNQPIVSVSLGLPATFRFGGLKRTD 162
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ + E + R NLTFR+
Sbjct: 163 PIAKYILHHGDVVVWGGPSRLFYHGILAL-------KRGEHEKLGPFRFNLTFRK 210
>gi|120612626|ref|YP_972304.1| DNA-N1-methyladenine dioxygenase [Acidovorax citrulli AAC00-1]
gi|120591090|gb|ABM34530.1| DNA-N1-methyladenine dioxygenase [Acidovorax citrulli AAC00-1]
Length = 224
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
A P PD C+ N Y+ +L LHQD+DE D P+VS S+G A FL+G
Sbjct: 118 AGFPDFEPDSCLVNRYAPGARLSLHQDRDEH----DLQAPIVSVSLGLPAVFLWGGFART 173
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L+ GDV+++GG R FHGV+ + P+ E R+NLTFR+
Sbjct: 174 GPVARVPLQHGDVVVWGGPDRLRFHGVQPVKDGLHPEWGAE-------RVNLTFRK 222
>gi|398847667|ref|ZP_10604562.1| alkylated DNA repair protein [Pseudomonas sp. GM84]
gi|398251348|gb|EJN36610.1| alkylated DNA repair protein [Pseudomonas sp. GM84]
Length = 214
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE+ D P+VS S+G A FL G L+ ++V
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEA----DFGQPIVSVSLGLPAVFLLGGLQRADRTQRVP 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV + P P+ M R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPVKPGVHPR-------MGERRINLTLRK 212
>gi|346994859|ref|ZP_08862931.1| alkylated DNA repair protein [Ruegeria sp. TW15]
Length = 215
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y K+GLHQDKDE+ D PV+S S+GD A F G+ + +
Sbjct: 115 PDCCLINYYGEGTKMGLHQDKDEA----DFSWPVLSISLGDDALFRIGNTTRGGKTESIW 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV+I GG +R +HG+++I LL + GR+NLT R
Sbjct: 171 LSSGDVVIMGGPARLTYHGIDRI--RFGSSKLLPKG----GRINLTLR 212
>gi|260428731|ref|ZP_05782708.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
SE45]
gi|260419354|gb|EEX12607.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
SE45]
Length = 207
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 377 TEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NWDPETSQYGTS-RPTDGA 434
+E + ++ L + P YQP G + ++M G+ W + Y R DG
Sbjct: 27 AQETLVARLRDCLRIAP--LYQPVTPRGQKMSVRMSAAGRFGWVTDRRGYRYEPRHPDGM 84
Query: 435 VPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLH 494
P IP E A+ E +S + +P+ C+ N+Y ++GLH
Sbjct: 85 DWPPIPDEVL-----------AIWETVSGCAR---------APECCLINWYGEGARMGLH 124
Query: 495 QDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFH 554
QD+DE+ D PVVS S+GD F G+ + + V L SGDV++ GG++R H
Sbjct: 125 QDRDEA----DFSCPVVSVSLGDEGLFRMGNTERGGSTESVWLRSGDVVVMGGEARLRHH 180
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
GV++I +LL + GR+NLT R
Sbjct: 181 GVDRI--RFGSSTLLPQG----GRINLTLR 204
>gi|167033553|ref|YP_001668784.1| 2OG-Fe(II) oxygenase [Pseudomonas putida GB-1]
gi|166860041|gb|ABY98448.1| 2OG-Fe(II) oxygenase [Pseudomonas putida GB-1]
Length = 219
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ +++
Sbjct: 119 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKTQRIP 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG R FHGV I P T P+ + R+NLT R+
Sbjct: 175 LSHGDVLVWGGIDRLRFHGVLPIKPGTHPR-------LGERRINLTLRK 216
>gi|422780873|ref|ZP_16833658.1| alkylated DNA repair protein AlkB [Escherichia coli TW10509]
gi|323977591|gb|EGB72677.1| alkylated DNA repair protein AlkB [Escherichia coli TW10509]
Length = 179
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 53 PAMPQSFHNLCQRAAT----------------AAGYPDFQPDACLINRYAPGAKLSLHQD 96
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 97 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 152
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 153 QPLKAGFHPLT-------ADCRYNLTFRQ 174
>gi|384919278|ref|ZP_10019334.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
357]
gi|384466889|gb|EIE51378.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
357]
Length = 204
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+P+ C+ N+Y ++GLHQDKDE+ D PVVS S+GD F G++ + V
Sbjct: 103 APECCLINWYGTGARMGLHQDKDEA----DFACPVVSVSLGDDGLFRMGNVERGGKTESV 158
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG++R HGV++I +LL + GR+NLT R
Sbjct: 159 WLHSGDVVVMGGEARLRHHGVDRI--RFGSSALLPQG----GRINLTLR 201
>gi|416343775|ref|ZP_11677675.1| Alkylated DNA repair protein AlkB [Escherichia coli EC4100B]
gi|320199807|gb|EFW74396.1| Alkylated DNA repair protein AlkB [Escherichia coli EC4100B]
Length = 213
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 20/123 (16%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A + G D + PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRA---------ATAAGYPDFQ-------PDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKI 559
+ +
Sbjct: 190 QPL 192
>gi|365108423|ref|ZP_09336324.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii 4_7_47CFAA]
gi|363640779|gb|EHL80229.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii 4_7_47CFAA]
Length = 216
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F L +A + G D +
Sbjct: 67 LGWTTDQHGYLYSPFDPLTGTHWPPLPDAFADLCQQA---------ATAAGYADFQ---- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR K
Sbjct: 114 ---PDACLINRYTPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLRRNDPLK 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++LE GDV+++GG SR +HG++ + T L + R NLTFR
Sbjct: 167 RLLLEHGDVVVWGGNSRLFYHGIQPL--KTGYHPLTGDC-----RYNLTFR 210
>gi|375002082|ref|ZP_09726422.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353076770|gb|EHB42530.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 216
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ LE GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 161 RSDPLQRISLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|254452509|ref|ZP_05065946.1| alkylated DNA repair protein [Octadecabacter arcticus 238]
gi|198266915|gb|EDY91185.1| alkylated DNA repair protein [Octadecabacter arcticus 238]
Length = 197
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 370 IEAWYGI----TEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NWDPETSQ 424
++ W G+ +E + I + P + P G + ++M G+ W + S
Sbjct: 6 VQVWQGLLNRPAQEAMVSDIRGIVASAP--LFSPMTPYGKPMLVQMTSAGRFGWFSDRSG 63
Query: 425 YGTSRP-TDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
Y S +GA P IP + G +RA P+ C+ N
Sbjct: 64 YRYSEVHPNGAPWPAIPASILDVWGHVSASARA--------------------PECCLVN 103
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y K+G+HQD+DE++ D+ PVVS S+GD F G+ + + L+SGDV+
Sbjct: 104 LYREAAKMGMHQDRDETE--FDE--PVVSVSLGDDGLFRIGNTTRGGKTESIWLKSGDVV 159
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ GG +R ++HG++K +LL GR+NLT R
Sbjct: 160 VMGGDARLVYHGIDKT--RAGSSTLLSGG----GRINLTLR 194
>gi|83855402|ref|ZP_00948932.1| alkylated DNA repair protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83843245|gb|EAP82412.1| alkylated DNA repair protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 200
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 48/227 (21%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NW- 418
L++ A+ ++A G+ ++V F++P G + ++M G W
Sbjct: 16 LTLSAQRGLLDAVRGVVKQVP--------------FFRPVMPSGQQMSVRMTSAGDYGWL 61
Query: 419 -DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP 477
D + +Y + P +G P IP E AI + +E+ P
Sbjct: 62 SDTQGYRYAPTHP-NGTPWPAIPTEV-----LAIWNDLTGLER---------------QP 100
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
+ C+ N+Y++ K+GLHQDK+E+ D PVVS S+GD G + + L
Sbjct: 101 ESCLINYYASDAKMGLHQDKNET----DFRWPVVSISLGDEGMLRVGGQKRGGKTDSLWL 156
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+SGDV++ GG++R +HG+++I ++ +LL + GR+N+T R
Sbjct: 157 QSGDVVVMGGEARLNYHGIDRIRAGSS--TLLPKG----GRINITLR 197
>gi|91790697|ref|YP_551649.1| DNA-N1-methyladenine dioxygenase [Polaromonas sp. JS666]
gi|91699922|gb|ABE46751.1| DNA-N1-methyladenine dioxygenase [Polaromonas sp. JS666]
Length = 217
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R +
Sbjct: 118 PDACLVNCYEPGARLSLHQDKDEG----DMSAPIVSVSLGLPAVFLFGTTRRKDRPARYR 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GDV ++GG SR +HGV AP + E + R R+NLTFR
Sbjct: 174 LVHGDVAVWGGPSRLAYHGV-------APLAAGEHALLGRQRINLTFR 214
>gi|375115168|ref|ZP_09760338.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|322715314|gb|EFZ06885.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 216
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GD++++GG+SR +HG++ + P + R NL FRQ
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLIFRQ 211
>gi|423140890|ref|ZP_17128528.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053444|gb|EHY71335.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 216
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR ++
Sbjct: 112 FQPDACLINRYATGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLRRSDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++LE GD++ +GG+SR +HG++ + P + R NLTFRQ
Sbjct: 168 ILLEHGDIVAWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|84500641|ref|ZP_00998890.1| alkylated DNA repair protein, putative [Oceanicola batsensis
HTCC2597]
gi|84391594|gb|EAQ03926.1| alkylated DNA repair protein, putative [Oceanicola batsensis
HTCC2597]
Length = 202
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 40/195 (20%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIP---VEFHQLVGK 449
+ P R G + ++M GK W D +Y P + PPI P +H+L G
Sbjct: 39 LFSPTTRFGKKMSVRMTSAGKYGWYSDARGYRYEPRHPDGQSWPPIPPQVLSVWHELTG- 97
Query: 450 AIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLP 509
+E+ +PD C+ N+Y ++G+HQD+DE+ D P
Sbjct: 98 --------LER---------------APDCCLINYYGEGARMGMHQDRDEA----DFTFP 130
Query: 510 VVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLL 569
V+S S+GD F G+ + LESGD +I GG +R HGV++I +++ LL
Sbjct: 131 VLSLSLGDDGLFRIGNEERGGRTESFWLESGDAVIMGGAARLTHHGVDRIRFNSS--RLL 188
Query: 570 EETSMRRGRLNLTFR 584
+ GR+NLT R
Sbjct: 189 PKG----GRINLTCR 199
>gi|388567394|ref|ZP_10153828.1| hypothetical protein Q5W_2163 [Hydrogenophaga sp. PBC]
gi|388265416|gb|EIK90972.1| hypothetical protein Q5W_2163 [Hydrogenophaga sp. PBC]
Length = 214
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y+ +L LHQDK+E D P+VS S+G A FL+G L K
Sbjct: 113 FEPDACLVNRYTPGARLSLHQDKNER----DYTAPIVSVSLGMRATFLWGGLARSGPTLK 168
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L GDV+++GG R +HGV + P +LL R NLTFRQ
Sbjct: 169 VALRHGDVVVWGGADRLRYHGVSPL--KDEPHALLGSQ-----RFNLTFRQ 212
>gi|409405499|ref|ZP_11253961.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum sp. GW103]
gi|386434048|gb|EIJ46873.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum sp. GW103]
Length = 217
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++ LHQDK+E +D P+VS S+G A FL+G + +++
Sbjct: 118 PDACLINRYEPAARMSLHQDKNE----LDMTQPIVSVSLGLPATFLFGGMARTDKPQRMR 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV+++GG +R FHG++ P E R R NLTFR+
Sbjct: 174 LESGDVVVWGGPARLAFHGID-------PLREGEHALTGRCRYNLTFRR 215
>gi|237801353|ref|ZP_04589814.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331024212|gb|EGI04269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 227
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G+ +P F QL A ++A P
Sbjct: 79 LGWITDRHGYRYSETDPQTGSKWSAMPDAFMQLAQSAA----------------LKAGYP 122
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y K+ LHQDKDE D PVVS S+G A F +G L A
Sbjct: 123 GFTPDACLINRYIPGAKMSLHQDKDEH----DHRWPVVSVSLGIPAIFQFGGLLRSDKAL 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAEHPLLGEQ-----RINLTFRK 223
>gi|104781900|ref|YP_608398.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions, repair of alkylated DNA [Pseudomonas
entomophila L48]
gi|95110887|emb|CAK15603.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions, repair of alkylated DNA [Pseudomonas
entomophila L48]
Length = 214
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ +++
Sbjct: 115 PDACLVNHYVPETRLSLHQDRDEQ----DYGHPIVSISLGLPAVFLFGGLQRSDRTQRIP 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 171 LNHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 212
>gi|331668918|ref|ZP_08369766.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Escherichia coli TA271]
gi|331064112|gb|EGI36023.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Escherichia coli TA271]
Length = 179
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 53 PAMPQSFHDLCQRAAT----------------AAGYPDFQPDACLINRYAPGAKLSLHQD 96
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 97 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 152
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 153 QPLKAGFHPLT-------GDCRYNLTFRQ 174
>gi|254440426|ref|ZP_05053920.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Octadecabacter
antarcticus 307]
gi|198255872|gb|EDY80186.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Octadecabacter
antarcticus 307]
Length = 211
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y T K+G+HQD+DE++ PVVS S+GD F G+ + +
Sbjct: 111 PECCLVNLYRETAKMGMHQDRDEAEFG----EPVVSVSLGDDGLFRIGNTTRGGKTESIW 166
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+SGDV++ GG +R ++HG++K ++ +LL GR+NLT R
Sbjct: 167 LKSGDVVVMGGDARLVYHGIDKTRAGSS--TLLSGG----GRINLTLR 208
>gi|162146641|ref|YP_001601100.1| alkylated DNA repair protein alkB [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543367|ref|YP_002275596.1| 2OG-Fe(II) oxygenase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785216|emb|CAP54762.1| putative alkylated DNA repair protein alkB [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531044|gb|ACI50981.1| 2OG-Fe(II) oxygenase [Gluconacetobacter diazotrophicus PAl 5]
Length = 225
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D + +Y P G P +P F L +A SRA +
Sbjct: 76 CGTAGWVSDTKGYRYDPMDPLSGHPWPALPALFADLAARAA--SRAGFSEFH-------- 125
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G
Sbjct: 126 ------PDACLINRYEPGTRLTLHQDRDEH----DFSQPIVSVSLGLPAIFLWGGPARSD 175
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V LE GDV+++GG +R + HG+ + P + R RLNLTFR+
Sbjct: 176 RVRRVPLEHGDVVVWGGPARLVHHGIHPLTEGMHPLT-------GRARLNLTFRR 223
>gi|431802784|ref|YP_007229687.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
HB3267]
gi|430793549|gb|AGA73744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
HB3267]
Length = 225
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ +++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRTDKTQRIP 180
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 222
>gi|300311009|ref|YP_003775101.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum seropedicae SmR1]
gi|300073794|gb|ADJ63193.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum seropedicae SmR1]
Length = 217
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD++E ID P+VS S+G A FL+G + A+++
Sbjct: 118 PDACLVNRYEPGAKMSLHQDRNE----IDMTQPIVSVSLGLPATFLFGGMERSDKAQRMR 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+SGDV+++GG +R FHGV+ + P + R NLTFR+
Sbjct: 174 LDSGDVVVWGGPARLAFHGVDTVRQAEHPLT-------GACRYNLTFRR 215
>gi|419386787|ref|ZP_13927665.1| alkB repair system for alkylated DNA and RNA [Escherichia coli
DEC14D]
gi|378231314|gb|EHX91425.1| alkB repair system for alkylated DNA and RNA [Escherichia coli
DEC14D]
Length = 125
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G
Sbjct: 11 RAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFG 66
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L+ K+++LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 67 GLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT-------TDCRYNLTFR 119
Query: 585 Q 585
Q
Sbjct: 120 Q 120
>gi|384085273|ref|ZP_09996448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 217
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A +PD C+ N Y ++ LHQD+DE D P+VS S+G A FL+G +
Sbjct: 110 KAGFAGFTPDACLVNVYVPGARMSLHQDRDEQ----DMDAPIVSISLGLPATFLFGGAQR 165
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K++ +E GDVL++GG +R +HGV I P E + R+NLT R+
Sbjct: 166 RDKVKRIFVEHGDVLVWGGPARLRYHGVAPIKPG-------EHPLVGARRINLTLRK 215
>gi|297519271|ref|ZP_06937657.1| 2OG-Fe(II) oxygenase [Escherichia coli OP50]
Length = 208
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N Y+ KL LHQD
Sbjct: 90 PAMPQSFHNLCQRAA----------------TAAGYPDFQPDACLINRYAPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKI 559
+ +
Sbjct: 190 QPL 192
>gi|422606732|ref|ZP_16678739.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. mori str. 301020]
gi|330890381|gb|EGH23042.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. mori str. 301020]
Length = 228
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G V P +P F QL A + G D
Sbjct: 79 LGWITDRHGYRYTATDPQTGLVWPAMPDAFMQLAKDAAH---------AAGYADF----- 124
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G L +
Sbjct: 125 --MPDACVINRYIPGAKMSLHQDKNE----YDHRWPVVSVSLGIPATFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAEHPLLGEQ-----RINLTFRK 223
>gi|116623103|ref|YP_825259.1| DNA-N1-methyladenine dioxygenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116226265|gb|ABJ84974.1| DNA-N1-methyladenine dioxygenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 214
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y +L LHQDKDE+ D P+VS S+G A F +G +
Sbjct: 111 PEFDPDACLVNRYEPGARLTLHQDKDET----DYTAPIVSVSLGLPAVFQFGGMIRKVRP 166
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ LESGDV+++GG +R +HGV + P P + R+NLTFR+
Sbjct: 167 RRMRLESGDVVVWGGPTRLAYHGVAPLKPGDHPLT-------GPFRINLTFRK 212
>gi|374364693|ref|ZP_09622794.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus
basilensis OR16]
gi|373103825|gb|EHP44845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus
basilensis OR16]
Length = 217
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y+ +L LHQD+DE +D P+VS S+G A FL+G L+ ++
Sbjct: 116 FKPDACLLNRYAPGTRLSLHQDRDE----LDLRAPIVSVSLGLPAVFLFGGLKRAERVQR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L GDV+++GG +R FHG+ AP + + + R R+NLT R+
Sbjct: 172 VRLAHGDVVVWGGPARLAFHGI-------APLADGDHALVGRERINLTLRK 215
>gi|313201954|ref|YP_004040612.1| 2og-fe(ii) oxygenase [Methylovorus sp. MP688]
gi|312441270|gb|ADQ85376.1| 2OG-Fe(II) oxygenase [Methylovorus sp. MP688]
Length = 212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQDK+E +D P+VS S+G SA F G ++ A ++
Sbjct: 113 PDACLINRYAPGTRMSLHQDKNE----VDYSAPIVSVSLGVSAVFQLGGMQRSEKASRIS 168
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDVL++GG+ R FHGV I P P + R+NLTFR+
Sbjct: 169 LQHGDVLVWGGEDRLRFHGVLPIKPQQHPLT-------GEDRINLTFRK 210
>gi|428149435|ref|ZP_18997251.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|427540656|emb|CCM93389.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 169
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 62 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 117
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 118 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 163
>gi|395449700|ref|YP_006389953.1| 2OG-Fe oxygenase [Pseudomonas putida ND6]
gi|388563697|gb|AFK72838.1| 2OG-Fe oxygenase [Pseudomonas putida ND6]
Length = 225
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ A+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L DVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 181 LSHSDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 222
>gi|302381322|ref|YP_003817145.1| 2OG-Fe(II) oxygenase [Brevundimonas subvibrioides ATCC 15264]
gi|302191950|gb|ADK99521.1| 2OG-Fe(II) oxygenase [Brevundimonas subvibrioides ATCC 15264]
Length = 201
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 85/193 (44%), Gaps = 34/193 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
FY+P G ++M LG+ W D +Y + P GA P IP L +
Sbjct: 38 FYRPVTPGGKPFSVRMTNLGRVGWVSDRAGYRYQPTHPETGAPWPAIPARLLDLW-NTLT 96
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D A PD C+ N Y T ++GLHQD+DE+ D PVVS
Sbjct: 97 DGSA-------------------PPDACLVNLYRETARMGLHQDRDEA----DLTAPVVS 133
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD+A F G + + + L SGDV G SR HG++++ LL +
Sbjct: 134 VSLGDTALFRIGAA-EGGPTRSIRLASGDVCALTGASRLARHGIDRLL--VGSSKLLGDG 190
Query: 573 SMRRGRLNLTFRQ 585
GR+NLT R+
Sbjct: 191 ----GRINLTLRR 199
>gi|428943302|ref|ZP_19016216.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae VA360]
gi|426297006|gb|EKV59554.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae VA360]
Length = 123
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 16 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 71
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 72 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 117
>gi|260221229|emb|CBA29583.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 217
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
A P PD C+ N Y+ ++ LHQDK+E D P+VS S+G A F G L
Sbjct: 110 RAGYPAFEPDACLINRYAPGARMTLHQDKNER----DYSAPIVSVSLGLPAVFELGGLER 165
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A+++ L+ GDVL++GG +R FHGV + P + LL R NLTFR+
Sbjct: 166 GDKAQRLTLQHGDVLVWGGPARLRFHGVRAVEPG---QHLLTGAH----RFNLTFRK 215
>gi|257485107|ref|ZP_05639148.1| alkylated DNA repair protein AlkB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|422681628|ref|ZP_16739897.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331010971|gb|EGH91027.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 228
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G V P +P F QL A + G D
Sbjct: 79 LGWITDRHGYRYTATDPQTGLVWPAMPDAFMQLAKDAAH---------AAGYADF----- 124
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G L +
Sbjct: 125 --MPDACLINRYIPGAKMSLHQDKNE----YDHRWPVVSVSLGIPATFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAEHPLLGEQ-----RINLTFRK 223
>gi|251790831|ref|YP_003005552.1| 2OG-Fe(II) oxygenase [Dickeya zeae Ech1591]
gi|247539452|gb|ACT08073.1| 2OG-Fe(II) oxygenase [Dickeya zeae Ech1591]
Length = 217
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F +L A + EA
Sbjct: 70 LGWVSDEHGYRYSAQDPLTGEPWPAMPTCFLRLSQAAAR----------------EAGYD 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
SPD C+ N Y+ KL LHQD+DE D P+VS S+G A FL+G + +
Sbjct: 114 GFSPDACLINRYAVGAKLSLHQDRDEQ----DLRQPIVSVSLGLGAVFLFGGRKRSDPCR 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG SR +H + + P L E RLNLTFR+
Sbjct: 170 RLALMHGDVVVWGGASRLNYHAILPLKRGPLPAGLSEAV-----RLNLTFRK 216
>gi|330015766|ref|ZP_08308262.1| putative alkylated DNA repair protein AlkB, partial [Klebsiella sp.
MS 92-3]
gi|328530585|gb|EGF57448.1| putative alkylated DNA repair protein AlkB [Klebsiella sp. MS 92-3]
Length = 120
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 13 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 68
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 69 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 114
>gi|387129212|ref|YP_006292102.1| Alkylated DNA repair protein AlkB [Methylophaga sp. JAM7]
gi|386270501|gb|AFJ01415.1| Alkylated DNA repair protein AlkB [Methylophaga sp. JAM7]
Length = 196
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD+C+ N Y K+GLHQD+DE D P+VS S+G A+F +G ++++
Sbjct: 97 PDVCLINVYQPGDKMGLHQDRDEQ----DFTQPIVSVSLGLPAKFQFGGTARNDAKQQIL 152
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG R FHGV + P + R R+NLTFRQ
Sbjct: 153 LSHGDVLVWGGAKRLNFHGVLPLKDGHHP-------LLGRKRINLTFRQ 194
>gi|289626271|ref|ZP_06459225.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289646192|ref|ZP_06477535.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581918|ref|ZP_16657058.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422597018|ref|ZP_16671295.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|298158669|gb|EFH99733.1| Alkylated DNA repair protein AlkB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330866765|gb|EGH01474.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330987312|gb|EGH85415.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 228
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G V P +P F QL A + G D
Sbjct: 79 LGWITDRHGYRYTATDPQTGLVWPAMPDAFMQLAKDAAH---------AAGYADF----- 124
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G L +
Sbjct: 125 --MPDACLINRYIPGAKMSLHQDKNE----YDHRWPVVSVSLGIPATFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAEHPLLGEQ-----RINLTFRK 223
>gi|421140400|ref|ZP_15600413.1| 2OG-Fe(II) oxygenase [Pseudomonas fluorescens BBc6R8]
gi|404508459|gb|EKA22416.1| 2OG-Fe(II) oxygenase [Pseudomonas fluorescens BBc6R8]
Length = 226
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P + P +P +L A D+ G D E
Sbjct: 80 LGWTTDSTGYRYSPIDPNNQQPWPALPAALRELAVTAAADA---------GFDDFE---- 126
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E + + PVVS S+G A FL+G +
Sbjct: 127 ---PDACLINRYVPGAKMSLHQDKNERRYAA----PVVSVSLGLPAIFLFGGHERSDKTQ 179
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
KV L GDV+++GG R FHGV I P T P M R+NLTFR
Sbjct: 180 KVSLFHGDVVVWGGVDRLRFHGVMPIKPGTHP-------VMGPQRINLTFR 223
>gi|423124952|ref|ZP_17112631.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5250]
gi|376400397|gb|EHT13010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5250]
Length = 216
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 19/114 (16%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE P+VS S+G A F +G LR ++
Sbjct: 112 FTPDACLINRYQPGAKLSLHQDKDEHNLRA----PIVSVSLGLPAIFQFGGLRRNDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGV----EKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG+ E I P+T R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKEGIHPETG-----------ACRYNLTFR 210
>gi|395795000|ref|ZP_10474313.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
Ag1]
gi|395340824|gb|EJF72652.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
Ag1]
Length = 226
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P + P +P +L A D+ G D E
Sbjct: 80 LGWTTDSTGYRYSPIDPNNQQPWPALPAALRELAVMAAADA---------GFDDFE---- 126
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E + + PVVS S+G A FL+G +
Sbjct: 127 ---PDACLINRYVPGAKMSLHQDKNERRYAA----PVVSVSLGLPAIFLFGGHERSDKTQ 179
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
KV L GDV+++GG R FHGV I P T P M R+NLTFR
Sbjct: 180 KVSLFHGDVVVWGGVDRLRFHGVMPIKPGTHP-------VMGPQRINLTFR 223
>gi|304320809|ref|YP_003854452.1| alkylated DNA repair protein [Parvularcula bermudensis HTCC2503]
gi|303299711|gb|ADM09310.1| alkylated DNA repair protein [Parvularcula bermudensis HTCC2503]
Length = 222
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 33/204 (16%)
Query: 382 IVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPV 441
++ +C+D + P PG + + + + LG D +Y P DGA P +P
Sbjct: 37 LIHLCQDRWIVP---VTPGGQTMSARQMNLGPLGWVTDRRGYRYEPRHPVDGAAWPEMPP 93
Query: 442 EFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQ 501
ALI + D+ E P SP+ + N Y T K+GLH+D DE+
Sbjct: 94 --------------ALIRIWN----DLLPEAP--SPEAGLVNLYGPTAKMGLHRDADEAA 133
Query: 502 ESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFP 561
+ + P++S S G F G + + ++L GDVLI G SR +HG+++I
Sbjct: 134 KDV----PILSVSFGAPGRFRLGGATRKGSTRSIVLGHGDVLILAGPSRHFYHGIDRIL- 188
Query: 562 DTAPKSLLEETSMRRGRLNLTFRQ 585
P L E RL+LT R+
Sbjct: 189 --LPSPLFAEDPH---RLSLTLRR 207
>gi|424777452|ref|ZP_18204416.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes sp.
HPC1271]
gi|422887519|gb|EKU29921.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes sp.
HPC1271]
Length = 215
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G P +P F +L+ + Q+S G+ +
Sbjct: 69 LGWISDEHGYRYSPTDPQSGLAWPAMPAVFKELLTRIAQES---------GQGPFQ---- 115
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N+Y + LHQD++E + P+VS S+G A FL+G + +
Sbjct: 116 ---PDTCLINYYDEQAHMSLHQDRNER----NLQHPIVSVSLGREALFLWGGAKRSDPVR 168
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDVL++ G SR FHGV ++ P + T GR+NLTFR+
Sbjct: 169 TLRLRDGDVLVWWGPSRLNFHGVRRL---EGPAHPVWGT----GRVNLTFRK 213
>gi|339487771|ref|YP_004702299.1| 2OG-Fe(II) oxygenase [Pseudomonas putida S16]
gi|338838614|gb|AEJ13419.1| 2OG-Fe(II) oxygenase [Pseudomonas putida S16]
Length = 215
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L+ +++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEQ----DFGQPIVSVSLGLPAVFLFGGLQRTDKTQRIP 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ + R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------LGERRINLTLRK 212
>gi|254488356|ref|ZP_05101561.1| 2OG-Fe(II) oxygenase [Roseobacter sp. GAI101]
gi|214045225|gb|EEB85863.1| 2OG-Fe(II) oxygenase [Roseobacter sp. GAI101]
Length = 200
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 34/192 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
F++P G + ++M GK W D E +Y + P +G P IP AI
Sbjct: 37 FFRPVTPGGQKMSVRMTSAGKYGWYSDAEGYRYAPTHP-NGTPWPAIPD-----AALAIW 90
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D +E+ P+ C+ N+Y + ++G+HQD+DE+ D PVVS
Sbjct: 91 DRLTGLER---------------HPECCLINYYDSDARMGMHQDRDEA----DFRWPVVS 131
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD F G + + L+SGDV++ GG++R HG+++I ++ LL +
Sbjct: 132 VSLGDEGLFRIGGQKRGGKTDSIWLQSGDVVVMGGEARLHHHGIDRIRAGSS--KLLPKG 189
Query: 573 SMRRGRLNLTFR 584
GR+NLT R
Sbjct: 190 ----GRINLTLR 197
>gi|71726056|gb|AAZ39179.1| alkylated DNA repair protein AlkB [Janthinobacterium lividum]
Length = 220
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y+ ++ LHQD+DE D P+VS S+G A FL+G A
Sbjct: 117 PGFAPDACLVNRYAPGARMALHQDRDEC----DFTAPIVSVSLGLPATFLFGGAERADKA 172
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG R FHGV AP E + R+NLTFR+
Sbjct: 173 ARIGLLHGDVVVWGGTDRLRFHGV-------APLKEGEHAVLGPQRINLTFRK 218
>gi|428936973|ref|ZP_19010326.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae JHCK1]
gi|426297246|gb|EKV59765.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae JHCK1]
Length = 122
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P SPD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+
Sbjct: 15 PEFSPDACLINRYCPGAKLSLHQDKDEQ----DLRAPIVSVSLGLPAIFQFGGLQRSDPL 70
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++++LE GDV+++GG+SR +HG++ + P++ R NLTFRQ
Sbjct: 71 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 116
>gi|238793617|ref|ZP_04637240.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia intermedia
ATCC 29909]
gi|238727032|gb|EEQ18563.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia intermedia
ATCC 29909]
Length = 216
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
D + +Y + P P IP L A Q +A PD
Sbjct: 75 DKQGYRYSSIDPLTEKSWPAIPARLMTLAVDAAQ----------------QAGFSQFEPD 118
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILE 538
C+ N Y A KL LHQDKDE +D P+VS S+G +A F +G L A +V+L
Sbjct: 119 ACLINRYEAGAKLSLHQDKDE----LDLRQPIVSVSLGLAAVFQFGGLAREAKCLRVLLT 174
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GDV+++GG SR +HGV + K+ T+ R+NLTFR+
Sbjct: 175 EGDVVVWGGPSRLNYHGVLPL------KAGFSATTGAY-RINLTFRR 214
>gi|304392428|ref|ZP_07374369.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ahrensia sp.
R2A130]
gi|303295532|gb|EFL89891.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ahrensia sp.
R2A130]
Length = 206
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 12/110 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF-LYGDLRDVANAKKV 535
P C+ NFY+ K+GLHQD DE+ ++ PV+S S+G++ F + G+LR+ +
Sbjct: 106 PQACLVNFYTDDAKMGLHQDSDET----NRAAPVLSVSLGNACLFRIGGNLRN-DPTQSF 160
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV+ G +R FHGV++I+ DT LL++ GRLN+T R+
Sbjct: 161 RLESGDVMALTGPARDAFHGVDRIYADT--NDLLKDG----GRLNVTLRR 204
>gi|110642422|ref|YP_670152.1| alkylated DNA repair protein AlkB [Escherichia coli 536]
gi|191170099|ref|ZP_03031653.1| alkylated DNA repair protein AlkB [Escherichia coli F11]
gi|300981312|ref|ZP_07175456.1| alkylated DNA repair protein AlkB [Escherichia coli MS 200-1]
gi|422374662|ref|ZP_16454937.1| alkylated DNA repair protein AlkB [Escherichia coli MS 60-1]
gi|432471580|ref|ZP_19713626.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE206]
gi|432713992|ref|ZP_19949032.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE8]
gi|433078390|ref|ZP_20264928.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE131]
gi|110344014|gb|ABG70251.1| alkylated DNA repair protein AlkB [Escherichia coli 536]
gi|190909615|gb|EDV69200.1| alkylated DNA repair protein AlkB [Escherichia coli F11]
gi|300307601|gb|EFJ62121.1| alkylated DNA repair protein AlkB [Escherichia coli MS 200-1]
gi|324014015|gb|EGB83234.1| alkylated DNA repair protein AlkB [Escherichia coli MS 60-1]
gi|430997969|gb|ELD14218.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE206]
gi|431256769|gb|ELF49704.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE8]
gi|431596620|gb|ELI66572.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE131]
Length = 216
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 27/149 (18%)
Query: 437 PIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQD 496
P +P FH L +A A P PD C+ N KL LHQD
Sbjct: 90 PAMPQSFHHLCQRAA----------------TAAGYPDFQPDACLINRCVPGAKLSLHQD 133
Query: 497 KDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGV 556
KDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG+
Sbjct: 134 KDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 189
Query: 557 EKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + P + R NLTFRQ
Sbjct: 190 QPLKVGVHPLT-------TDCRYNLTFRQ 211
>gi|304397516|ref|ZP_07379394.1| 2OG-Fe(II) oxygenase [Pantoea sp. aB]
gi|440760431|ref|ZP_20939543.1| Alkylated DNA repair protein AlkB [Pantoea agglomerans 299R]
gi|304355134|gb|EFM19503.1| 2OG-Fe(II) oxygenase [Pantoea sp. aB]
gi|436425804|gb|ELP23529.1| Alkylated DNA repair protein AlkB [Pantoea agglomerans 299R]
Length = 213
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G +
Sbjct: 109 FPGFNPDACLLNRYEPGAKLTLHQDKDEK----DLHQPIVSVSLGLPAVFQFGGFERGDS 164
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V+LE GD++++GG SR +HG+ + P P + R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHPLA-------GAWRYNLTFRR 211
>gi|126732879|ref|ZP_01748670.1| alkylated DNA repair protein, putative [Sagittula stellata E-37]
gi|126706655|gb|EBA05729.1| alkylated DNA repair protein, putative [Sagittula stellata E-37]
Length = 199
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N+Y+ ++GLHQD DE D PV+S S+GD A F G + V
Sbjct: 99 PECCLINWYAEDARMGLHQDVDEQ----DYDCPVLSVSLGDDALFRMGGENRRDPTRSVW 154
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGD+++ G SRR FHG++++ P T+ +L + GRLNLT R
Sbjct: 155 LASGDLVLLTGPSRRAFHGIDRLRPGTS--TLFPDG----GRLNLTLR 196
>gi|265996285|ref|ZP_06108842.1| alkylated DNA repair protein AlkB [Brucella ceti M490/95/1]
gi|262550582|gb|EEZ06743.1| alkylated DNA repair protein AlkB [Brucella ceti M490/95/1]
Length = 211
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|148558033|ref|YP_001257498.1| alkylated DNA repair protein AlkB [Brucella ovis ATCC 25840]
gi|148369318|gb|ABQ62190.1| alkylated DNA repair protein AlkB [Brucella ovis ATCC 25840]
Length = 199
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 92 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 147
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 148 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 197
>gi|260544840|ref|ZP_05820661.1| alkylated DNA repair protein AlkB [Brucella abortus NCTC 8038]
gi|261217152|ref|ZP_05931433.1| 2OG-Fe(II) oxygenase superfamily [Brucella ceti M13/05/1]
gi|261313399|ref|ZP_05952596.1| 2OG-Fe(II) oxygenase superfamily [Brucella pinnipedialis
M163/99/10]
gi|265986636|ref|ZP_06099193.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis
M292/94/1]
gi|260098111|gb|EEW81985.1| alkylated DNA repair protein AlkB [Brucella abortus NCTC 8038]
gi|260922241|gb|EEX88809.1| 2OG-Fe(II) oxygenase superfamily [Brucella ceti M13/05/1]
gi|261302425|gb|EEY05922.1| 2OG-Fe(II) oxygenase superfamily [Brucella pinnipedialis
M163/99/10]
gi|264658833|gb|EEZ29094.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis
M292/94/1]
Length = 211
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|383317405|ref|YP_005378247.1| alkylated DNA repair protein [Frateuria aurantia DSM 6220]
gi|379044509|gb|AFC86565.1| alkylated DNA repair protein [Frateuria aurantia DSM 6220]
Length = 215
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG + D +Y P G P +P F +L +A AL A P
Sbjct: 69 LGWHSDEAGYRYQPVDPLSGHPWPAMPPAFAELARQAA----AL------------AGYP 112
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y L LHQD++E D PVVS S+G A FL+G L+ A
Sbjct: 113 DFHPDACLINRYRPGAGLSLHQDRNEQ----DHGQPVVSVSLGMEARFLWGGLQRGQTAL 168
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K+ L GD+L++GG R FHG+ + P+ L+ R+NLTFR+
Sbjct: 169 KLPLYHGDILVWGGPDRLRFHGIAPLQGPPHPEWGLK-------RINLTFRR 213
>gi|398792788|ref|ZP_10553349.1| alkylated DNA repair protein [Pantoea sp. YR343]
gi|398212485|gb|EJM99093.1| alkylated DNA repair protein [Pantoea sp. YR343]
Length = 213
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G
Sbjct: 106 EAGFAGFNPDACLINRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPAVFQFGGFER 161
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V+LE GD++++GG SR +HG+ + P P++ R NLTFR+
Sbjct: 162 GDATQRVLLEHGDIVVWGGPSRLRYHGILPLKPGIHPQA-------GAFRFNLTFRR 211
>gi|17989084|ref|NP_541717.1| alkylated DNA repair protein AlkB [Brucella melitensis bv. 1 str.
16M]
gi|225686325|ref|YP_002734297.1| alkylated DNA repair protein AlkB [Brucella melitensis ATCC 23457]
gi|256262538|ref|ZP_05465070.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 2 str.
63/9]
gi|260564629|ref|ZP_05835114.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
16M]
gi|265989849|ref|ZP_06102406.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993043|ref|ZP_06105600.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 3 str.
Ether]
gi|384213042|ref|YP_005602125.1| alkylated DNA repair protein AlkB [Brucella melitensis M5-90]
gi|384410143|ref|YP_005598763.1| alkylated DNA repair protein AlkB [Brucella melitensis M28]
gi|384446668|ref|YP_005660886.1| alkylated DNA repair protein [Brucella melitensis NI]
gi|6759911|gb|AAF28103.1|AF148683_1 AlkB [Brucella melitensis]
gi|17984929|gb|AAL53981.1| alkylated DNA repair protein alkb [Brucella melitensis bv. 1 str.
16M]
gi|225642430|gb|ACO02343.1| alkylated DNA repair protein AlkB [Brucella melitensis ATCC 23457]
gi|260152272|gb|EEW87365.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
16M]
gi|262763913|gb|EEZ09945.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 3 str.
Ether]
gi|263000518|gb|EEZ13208.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092317|gb|EEZ16570.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 2 str.
63/9]
gi|326410690|gb|ADZ67754.1| alkylated DNA repair protein AlkB [Brucella melitensis M28]
gi|326553982|gb|ADZ88621.1| alkylated DNA repair protein AlkB [Brucella melitensis M5-90]
gi|349744665|gb|AEQ10207.1| alkylated DNA repair protein [Brucella melitensis NI]
Length = 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYKPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|261220367|ref|ZP_05934648.1| AlkB [Brucella ceti B1/94]
gi|260918951|gb|EEX85604.1| AlkB [Brucella ceti B1/94]
Length = 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|265985482|ref|ZP_06098217.1| alkylated DNA repair protein AlkB [Brucella sp. 83/13]
gi|306839680|ref|ZP_07472483.1| alkylated DNA repair protein AlkB [Brucella sp. NF 2653]
gi|264664074|gb|EEZ34335.1| alkylated DNA repair protein AlkB [Brucella sp. 83/13]
gi|306405260|gb|EFM61536.1| alkylated DNA repair protein AlkB [Brucella sp. NF 2653]
Length = 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|94968035|ref|YP_590083.1| DNA-N1-methyladenine dioxygenase [Candidatus Koribacter versatilis
Ellin345]
gi|94550085|gb|ABF40009.1| DNA-N1-methyladenine dioxygenase [Candidatus Koribacter versatilis
Ellin345]
Length = 214
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y T P+ G P IP F +L +A A
Sbjct: 68 LGWVTDSKGYRYTTEDPSTGKRWPEIPEAFEKLAREAAD----------------AAGFS 111
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y+ ++ LHQD++E D P+VS S+G A F +G++ + A+
Sbjct: 112 GFAPDACLINRYAVGARMTLHQDRNEQ----DFGQPIVSVSLGLPATFQFGEVENRRGAQ 167
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V + GDV+++GG +R +HGV A K+ + E + R NLTFR+
Sbjct: 168 NVAVRHGDVVVWGGTARLAYHGV------LALKAGVHEATGEY-RFNLTFRR 212
>gi|23500280|ref|NP_699720.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|62317604|ref|YP_223457.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
9-941]
gi|83269587|ref|YP_418878.1| 2OG-Fe(II) oxygenase [Brucella melitensis biovar Abortus 2308]
gi|161620597|ref|YP_001594483.1| alkylated DNA repair protein AlkB [Brucella canis ATCC 23365]
gi|163844692|ref|YP_001622347.1| hypothetical protein BSUIS_B0529 [Brucella suis ATCC 23445]
gi|189022857|ref|YP_001932598.1| 2OG-Fe(II) oxygenase [Brucella abortus S19]
gi|225628968|ref|ZP_03787002.1| alkylated DNA repair protein [Brucella ceti str. Cudo]
gi|237817154|ref|ZP_04596146.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus str.
2308 A]
gi|256015312|ref|YP_003105321.1| alkylated DNA repair protein AlkB [Brucella microti CCM 4915]
gi|260568174|ref|ZP_05838643.1| AlkB protein [Brucella suis bv. 4 str. 40]
gi|260756700|ref|ZP_05869048.1| alkylated DNA repair protein alkB [Brucella abortus bv. 6 str. 870]
gi|260760131|ref|ZP_05872479.1| alkylated DNA repair protein [Brucella abortus bv. 4 str. 292]
gi|260763369|ref|ZP_05875701.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260882516|ref|ZP_05894130.1| AlkB [Brucella abortus bv. 9 str. C68]
gi|261215988|ref|ZP_05930269.1| alkylated DNA repair protein alkB [Brucella abortus bv. 3 str.
Tulya]
gi|261319363|ref|ZP_05958560.1| 2OG-Fe(II) oxygenase, partial [Brucella pinnipedialis B2/94]
gi|261320023|ref|ZP_05959220.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261750246|ref|ZP_05993955.1| alkylated DNA repair protein [Brucella suis bv. 5 str. 513]
gi|261753518|ref|ZP_05997227.1| alkylated DNA repair protein [Brucella suis bv. 3 str. 686]
gi|261756688|ref|ZP_06000397.1| alkylated DNA repair protein [Brucella sp. F5/99]
gi|294853669|ref|ZP_06794341.1| alkylated DNA repair protein [Brucella sp. NVSL 07-0026]
gi|297249648|ref|ZP_06933349.1| alkylated DNA repair protein [Brucella abortus bv. 5 str. B3196]
gi|340792263|ref|YP_004757727.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis B2/94]
gi|376271247|ref|YP_005114292.1| alkylated DNA repair protein [Brucella abortus A13334]
gi|376276767|ref|YP_005152828.1| alkylated DNA repair protein [Brucella canis HSK A52141]
gi|376278501|ref|YP_005108534.1| alkylated DNA repair protein AlkB [Brucella suis VBI22]
gi|384223063|ref|YP_005614228.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|423168499|ref|ZP_17155201.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI435a]
gi|423172067|ref|ZP_17158741.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI474]
gi|423174202|ref|ZP_17160872.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI486]
gi|423176079|ref|ZP_17162745.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI488]
gi|423181496|ref|ZP_17168136.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI010]
gi|423184629|ref|ZP_17171265.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI016]
gi|423187781|ref|ZP_17174394.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI021]
gi|423190200|ref|ZP_17176809.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI259]
gi|6759906|gb|AAF28100.1|AF148681_1 AlkB [Brucella abortus]
gi|6759909|gb|AAF28102.1|AF148682_2 AlkB [Brucella abortus]
gi|23463889|gb|AAN33725.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|62197797|gb|AAX76096.1| AlkB, alkylated DNA repair protein [Brucella abortus bv. 1 str.
9-941]
gi|82939861|emb|CAJ12870.1| 2OG-Fe(II) oxygenase superfamily [Brucella melitensis biovar
Abortus 2308]
gi|161337408|gb|ABX63712.1| Alkylated DNA repair protein AlkB [Brucella canis ATCC 23365]
gi|163675415|gb|ABY39525.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021431|gb|ACD74152.1| 2OG-Fe(II) oxygenase superfamily [Brucella abortus S19]
gi|225616814|gb|EEH13862.1| alkylated DNA repair protein [Brucella ceti str. Cudo]
gi|237787967|gb|EEP62183.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus str.
2308 A]
gi|255997972|gb|ACU49659.1| alkylated DNA repair protein AlkB [Brucella microti CCM 4915]
gi|260154839|gb|EEW89920.1| AlkB protein [Brucella suis bv. 4 str. 40]
gi|260670449|gb|EEX57389.1| alkylated DNA repair protein [Brucella abortus bv. 4 str. 292]
gi|260673790|gb|EEX60611.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260676808|gb|EEX63629.1| alkylated DNA repair protein alkB [Brucella abortus bv. 6 str. 870]
gi|260872044|gb|EEX79113.1| AlkB [Brucella abortus bv. 9 str. C68]
gi|260917595|gb|EEX84456.1| alkylated DNA repair protein alkB [Brucella abortus bv. 3 str.
Tulya]
gi|261292713|gb|EEX96209.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298586|gb|EEY02083.1| 2OG-Fe(II) oxygenase [Brucella pinnipedialis B2/94]
gi|261736672|gb|EEY24668.1| alkylated DNA repair protein [Brucella sp. F5/99]
gi|261739999|gb|EEY27925.1| alkylated DNA repair protein [Brucella suis bv. 5 str. 513]
gi|261743271|gb|EEY31197.1| alkylated DNA repair protein [Brucella suis bv. 3 str. 686]
gi|294819324|gb|EFG36324.1| alkylated DNA repair protein [Brucella sp. NVSL 07-0026]
gi|297173517|gb|EFH32881.1| alkylated DNA repair protein [Brucella abortus bv. 5 str. B3196]
gi|340560722|gb|AEK55959.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis B2/94]
gi|343384511|gb|AEM20002.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|358259939|gb|AEU07672.1| alkylated DNA repair protein AlkB [Brucella suis VBI22]
gi|363402419|gb|AEW19388.1| alkylated DNA repair protein [Brucella abortus A13334]
gi|363405141|gb|AEW15435.1| alkylated DNA repair protein [Brucella canis HSK A52141]
gi|374536489|gb|EHR08009.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI474]
gi|374538992|gb|EHR10499.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI435a]
gi|374540203|gb|EHR11705.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI486]
gi|374546086|gb|EHR17546.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI010]
gi|374546929|gb|EHR18388.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI016]
gi|374553961|gb|EHR25374.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI021]
gi|374554681|gb|EHR26091.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI488]
gi|374556240|gb|EHR27645.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI259]
Length = 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|393757595|ref|ZP_10346419.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393165287|gb|EJC65336.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 215
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G P +P F L+ Q+S G+ ++
Sbjct: 69 LGWISDEHGYRYSPTDPQSGLGWPAMPPVFKDLLTHIAQES---------GQGPLQ---- 115
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N+Y + LHQD++E D P+VS S+G A FL+G A +
Sbjct: 116 ---PDTCLINYYDEHAHMSLHQDRNER----DLQHPIVSVSLGREALFLWGGATRSAPVR 168
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDVLI+ G SR FHG+ ++ P L + GR+NLTFR+
Sbjct: 169 TLRLRDGDVLIWWGPSRLNFHGIRRL---EGPAHPLWGS----GRVNLTFRK 213
>gi|372275014|ref|ZP_09511050.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea sp. SL1_M5]
Length = 213
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
G + D QY +G P +P F R L ++ +T EA
Sbjct: 67 FGWSVDSRGYQYQQQDNLNGRKWPAMPPLF-----------RTLAQQAAT-----EAGFS 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G + +
Sbjct: 111 GFNPDACLLNRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPAVFQFGGFERGDSTQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GD++++GG SR +HG+ + P P + R NLTFR+
Sbjct: 167 RVLLEHGDIVVWGGPSRLRYHGILPLKPGVHPL-------VGAWRYNLTFRR 211
>gi|317048896|ref|YP_004116544.1| 2OG-Fe(II) oxygenase [Pantoea sp. At-9b]
gi|316950513|gb|ADU69988.1| 2OG-Fe(II) oxygenase [Pantoea sp. At-9b]
Length = 213
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG + D QY G P +P F L + Q EA
Sbjct: 67 LGWSSDSRGYQYTEQDNHSGHKWPPMPTLFRALAQQTAQ----------------EAGFS 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G +
Sbjct: 111 GFNPDACLINRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPAVFQFGGFERGDATQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GD++++GG SR +HG+ + P P++ R NLTFR+
Sbjct: 167 RVLLEHGDIVVWGGPSRLRYHGILPLKPGIHPEA-------GAFRYNLTFRR 211
>gi|261323219|ref|ZP_05962416.1| AlkB [Brucella neotomae 5K33]
gi|261299199|gb|EEY02696.1| AlkB [Brucella neotomae 5K33]
Length = 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|167643975|ref|YP_001681638.1| 2OG-Fe(II) oxygenase [Caulobacter sp. K31]
gi|167346405|gb|ABZ69140.1| 2OG-Fe(II) oxygenase [Caulobacter sp. K31]
Length = 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 467 DIEAEL--PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
D+ A+L P PD + N Y ++GLHQD+DE+ D PV+S S+GD+A F G
Sbjct: 91 DLWADLGDPQTPPDAALINLYRGEARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIG 146
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ + L SGDV G +R FHGV++I P ++ SL+ GR+N+T R
Sbjct: 147 GTSRKGPTRSLKLSSGDVCRLSGPARLAFHGVDRILPGSS--SLVAGG----GRINITLR 200
Query: 585 Q 585
+
Sbjct: 201 R 201
>gi|170721657|ref|YP_001749345.1| 2OG-Fe(II) oxygenase [Pseudomonas putida W619]
gi|169759660|gb|ACA72976.1| 2OG-Fe(II) oxygenase [Pseudomonas putida W619]
Length = 214
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE+ D P+VS S+G A FL G + +++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEA----DFGQPIVSVSLGLPAVFLLGGFQRSDKTRRIA 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+ R FHGV I P P+ M R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPIKPGVHPR-------MGERRINLTLRK 212
>gi|306845885|ref|ZP_07478453.1| alkylated DNA repair protein AlkB [Brucella inopinata BO1]
gi|306273777|gb|EFM55615.1| alkylated DNA repair protein AlkB [Brucella inopinata BO1]
Length = 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGIKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|402843977|ref|ZP_10892356.1| putative alkylated DNA repair protein AlkB [Klebsiella sp. OBRC7]
gi|423104013|ref|ZP_17091715.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5242]
gi|376385655|gb|EHS98376.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5242]
gi|402275785|gb|EJU24921.1| putative alkylated DNA repair protein AlkB [Klebsiella sp. OBRC7]
Length = 216
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE P+VS S+G A F +G LR ++
Sbjct: 112 FTPDACLINRYQPGTKLSLHQDKDEQNLRA----PIVSVSLGLPAIFQFGGLRRNDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKEGIHPAT-------GACRYNLTFR 210
>gi|420260000|ref|ZP_14762690.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404512515|gb|EKA26360.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 221
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P P +P F L A Q + G D +
Sbjct: 70 LGWVSDVGGYRYSSIDPLTELCWPAMPQSFMSLAVAAAQQA---------GFVDFQ---- 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y KL LHQDKDE +D P+VS S+G A F +G A +
Sbjct: 117 ---PDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAVFQFGGASREAKCQ 169
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+L GDV+++GG SR +HGV I +P + R+NLTFR+
Sbjct: 170 RVLLSEGDVVVWGGPSRLNYHGVLPIKAGFSPAA-------GAYRINLTFRR 214
>gi|397659108|ref|YP_006499810.1| alkylated DNA repair protein AlkB [Klebsiella oxytoca E718]
gi|394347327|gb|AFN33448.1| Alkylated DNA repair protein AlkB [Klebsiella oxytoca E718]
Length = 216
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE P+VS S+G A F +G LR ++
Sbjct: 112 FTPDACLINRYQPGTKLSLHQDKDEQNLRA----PIVSVSLGLPAIFQFGGLRRNDPLRR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKEGIHPAT-------GGCRYNLTFR 210
>gi|255262538|ref|ZP_05341880.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Thalassiobium sp.
R2A62]
gi|255104873|gb|EET47547.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Thalassiobium sp.
R2A62]
Length = 201
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N+Y ++G+HQD+DE+ D PVVS S+GD F G + +
Sbjct: 101 PECCLVNWYDPDARMGMHQDRDET----DFAQPVVSISLGDDGLFRVGSVERGGQTASLW 156
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV + GG +R + HGV++I T+ ++L GR+NLT R
Sbjct: 157 LRSGDVAVMGGDARLVHHGVDRIKAGTS--TILANP----GRINLTLR 198
>gi|292488806|ref|YP_003531693.1| alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
CFBP1430]
gi|292899959|ref|YP_003539328.1| alkylated DNA repair protein [Erwinia amylovora ATCC 49946]
gi|428785757|ref|ZP_19003246.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
ACW56400]
gi|291199807|emb|CBJ46930.1| alkylated DNA repair protein [Erwinia amylovora ATCC 49946]
gi|291554240|emb|CBA21524.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
CFBP1430]
gi|312172963|emb|CBX81218.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
ATCC BAA-2158]
gi|426275621|gb|EKV53350.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
ACW56400]
Length = 224
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG + D Y T G P +P F QL + + EA
Sbjct: 67 LGWSSDSRGYHYRTLDEASGQRWPAMPPPFRQLAQECAR----------------EAGFG 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y + K+ LHQDKDE D P+VS S+G A FL+G ++
Sbjct: 111 GFDPDACLINRYESGAKMTLHQDKDER----DLRQPIVSVSLGLPAVFLFGGFTRSDASR 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+V+LE GDV+++GG SR +HG+ + P + R NLTFR
Sbjct: 167 RVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLT-------GAFRFNLTFR 210
>gi|212711803|ref|ZP_03319931.1| hypothetical protein PROVALCAL_02878 [Providencia alcalifaciens DSM
30120]
gi|212685325|gb|EEB44853.1| hypothetical protein PROVALCAL_02878 [Providencia alcalifaciens DSM
30120]
Length = 213
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 456 ALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSI 515
AL +++S + +A +PD C+ N Y K+ LHQDKDE+ D P+VSFS+
Sbjct: 91 ALFKQLSINAAE-KAGFVGFAPDACLINRYGVGAKMSLHQDKDEA----DFSQPIVSFSL 145
Query: 516 GDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMR 575
G A F +G K + LE GDV ++GG+SR +HGV I P+
Sbjct: 146 GLPAIFDFGGSTREHPRKSIELEHGDVFVWGGRSRLNYHGVRHIKSGVHPQ-------FG 198
Query: 576 RGRLNLTFRQ 585
R NLTFR+
Sbjct: 199 AYRFNLTFRR 208
>gi|375261996|ref|YP_005021166.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
KCTC 1686]
gi|365911474|gb|AEX06927.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
KCTC 1686]
Length = 216
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE P+VS S+G A F +G LR ++
Sbjct: 112 FTPDACLINRYQPGTKLSLHQDKDEQNLRA----PIVSVSLGLPAIFQFGGLRRNDPLRR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V+LE GDV+++GG+SR +HG++ + P + R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKEGIHPAT-------GGCRYNLTFR 210
>gi|306840556|ref|ZP_07473313.1| alkylated DNA repair protein AlkB [Brucella sp. BO2]
gi|306289461|gb|EFM60686.1| alkylated DNA repair protein AlkB [Brucella sp. BO2]
Length = 212
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A P +PD C+ N Y +L LHQDKDE S P+VS S+G A F +G ++
Sbjct: 105 QAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGIKR 160
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K IL GDV+++GG SR +HG+ P E + RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGI-------LPLKSGEHERLGPFRLNLTFRK 210
>gi|90423198|ref|YP_531568.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris BisB18]
gi|90105212|gb|ABD87249.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris
BisB18]
Length = 216
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R EA PD C+ N Y K+ LHQDKDE+ D P+VS S+G A F++G
Sbjct: 105 RAASEAGFANFHPDACLINRYVPGAKMSLHQDKDEA----DFTAPIVSVSLGLPAVFMFG 160
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ ++ LE GDV+ +GG +R FHGV + E + R R+NLTFR
Sbjct: 161 GAKRSDKPQRFALEHGDVVAWGGAARLAFHGVAALKDG-------EHPLLGRQRINLTFR 213
Query: 585 Q 585
+
Sbjct: 214 K 214
>gi|349686632|ref|ZP_08897774.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
oboediens 174Bp2]
Length = 217
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD+C+ N Y ++GLHQD+DE ++ PVVS S G A F +G LR ++V
Sbjct: 119 PDVCLINGYRPGARMGLHQDRDERLDA-----PVVSVSFGLPAIFQWGGLRRTDPLRRVP 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +FHGV + + R NLTFR+
Sbjct: 174 LRHGDVVVWGGPSRLVFHGVAVL-------RAGDHAVTGPCRYNLTFRR 215
>gi|241664018|ref|YP_002982378.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12D]
gi|309781390|ref|ZP_07676126.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_7_47FAA]
gi|404396948|ref|ZP_10988742.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_2_56FAA]
gi|240866045|gb|ACS63706.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12D]
gi|308919803|gb|EFP65464.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_7_47FAA]
gi|348617078|gb|EGY66559.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_2_56FAA]
Length = 218
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y T P G P +P F +L A EA
Sbjct: 71 ALGWTSDRRGYRYATHDPLTGNPWPPLPDVFLRLAHNAAA----------------EAGF 114
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
+PD C+ N Y ++ LHQDKDE D P+VS S+G A FL+G R
Sbjct: 115 HGFTPDACLINRYVPGARMSLHQDKDEQ----DYGAPIVSVSLGMPAVFLFGGHRRADRP 170
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ L GDV+++GG R +HG+ + P ++L R+NLTFR+
Sbjct: 171 QRIPLFHGDVVVWGGPDRLRYHGIAPL--KDHPHAMLGSQ-----RINLTFRK 216
>gi|308808165|ref|XP_003081393.1| oxidoreductase, 2OG-Fe (ISS) [Ostreococcus tauri]
gi|116059855|emb|CAL55562.1| oxidoreductase, 2OG-Fe (ISS) [Ostreococcus tauri]
Length = 214
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 455 RALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKC-LPVVSF 513
R + + + ++ +P M+P C+ NFY + H+D ++ + + P+VSF
Sbjct: 58 REMCAEAVRAAQKVDDAMPDMNPTTCLVNFYKDGAEFKWHKDSEDPKLVKSRAGPPIVSF 117
Query: 514 SIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS 573
S+G SA+F Y + + V L SGDVL+FGG SR I H V + P + P L
Sbjct: 118 SVGMSADFGYKYSFEDPTHEVVRLNSGDVLLFGGPSRMIVHSVLNVHPGSMPGHL--RGK 175
Query: 574 MRRGRLNLTFR 584
M GRLN+T R
Sbjct: 176 MLNGRLNVTVR 186
>gi|114769789|ref|ZP_01447399.1| alkylated DNA repair protein, putative [Rhodobacterales bacterium
HTCC2255]
gi|114549494|gb|EAU52376.1| alkylated DNA repair protein, putative [alpha proteobacterium
HTCC2255]
Length = 205
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 34/184 (18%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + +KM GK W D E +Y +P +G P IP + K + IE+
Sbjct: 50 GNKMSVKMTSAGKYGWFSDGEGYRYIDCQP-NGNNWPQIPGSILNIWKKFVS-----IER 103
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
I PD C+ N+YS + K+GLHQD DE+ D PV+S S+GD A
Sbjct: 104 I---------------PDCCLINYYSESAKMGLHQDNDEA----DFNWPVLSISLGDDAL 144
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F G+ + L SGD+++ GG +R HGV++I T+ LL+ GR+N
Sbjct: 145 FRIGNNKKGGKTDSFWLNSGDIVLMGGDARLKHHGVDRIRFGTS--RLLKNG----GRIN 198
Query: 581 LTFR 584
LT R
Sbjct: 199 LTLR 202
>gi|91775654|ref|YP_545410.1| DNA-N1-methyladenine dioxygenase [Methylobacillus flagellatus KT]
gi|91709641|gb|ABE49569.1| DNA-N1-methyladenine dioxygenase [Methylobacillus flagellatus KT]
Length = 241
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y KL LHQDKDE D P+VS S+G +A FL+G LR +
Sbjct: 142 PDACLINRYQTGAKLSLHQDKDEQ----DFSQPIVSVSLGLAATFLFGGLRRSDPVLRTE 197
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GDV+++GG++R +HG+ + P P L + R+NLTFR
Sbjct: 198 LNHGDVVVWGGQARLRYHGILPLKPGEHP--LTGDV-----RINLTFR 238
>gi|422013181|ref|ZP_16359809.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
burhodogranariea DSM 19968]
gi|414103389|gb|EKT64964.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
burhodogranariea DSM 19968]
Length = 222
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y +L LHQDK+E D P+VS S+G A FL+G L K+
Sbjct: 117 FNPDACLINRYYPGSRLTLHQDKNER----DMSQPIVSVSLGLPAMFLFGGLTREQTCKR 172
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +HGV + D P S +E+ R NLTFR+
Sbjct: 173 FPLTQGDVMVWGGPSRLNYHGVMPL-KDAIPPSPAQESV----RYNLTFRR 218
>gi|422638088|ref|ZP_16701520.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae Cit 7]
gi|330950484|gb|EGH50744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae Cit 7]
Length = 228
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G P +P F L A + A
Sbjct: 79 LGWITDRHGYRYTATDPQTGQAWPAMPDAFMHLAQDAA----------------LAAGYA 122
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQD++E D C PVVS S+G A F +G L +
Sbjct: 123 GFVPDACLINRYIPGARMSLHQDRNEH----DHCWPVVSVSLGIPAIFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|421725239|ref|ZP_16164436.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
M5al]
gi|410373954|gb|EKP28638.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
M5al]
Length = 160
Score = 75.9 bits (185), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 19/113 (16%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD C+ N Y KL LHQDKDE P+VS S+G A F +G LR ++V
Sbjct: 57 TPDACLINRYQPGAKLSLHQDKDEHNLRA----PIVSVSLGLPAIFQFGGLRRNDPLQRV 112
Query: 536 ILESGDVLIFGGKSRRIFHGV----EKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+LE GDV+++GG+SR +HG+ E I P+T R NLTFR
Sbjct: 113 LLEHGDVVVWGGESRLFYHGIQPLKEGIHPETGA-----------CRYNLTFR 154
>gi|300717602|ref|YP_003742405.1| DNA repair system specific for alkylated DNA [Erwinia billingiae
Eb661]
gi|299063438|emb|CAX60558.1| DNA repair system specific for alkylated DNA [Erwinia billingiae
Eb661]
Length = 214
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
G + D QY G P +P F QL + EA
Sbjct: 67 FGWSTDSRGYQYSERDNASGLRWPAMPDRFRQLARECAD----------------EAGFA 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G +
Sbjct: 111 QFNPDACLINRYEPGAKLTLHQDKDEQ----DLKQPIVSVSLGLPAVFQFGGFDRGDATQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GD++++GG SR FHG+ + P P + R NLTFR+
Sbjct: 167 RVLLEHGDIVVWGGPSRLRFHGILPLKPGIHPLT-------GAFRYNLTFRR 211
>gi|311278819|ref|YP_003941050.1| 2OG-Fe(II) oxygenase [Enterobacter cloacae SCF1]
gi|308748014|gb|ADO47766.1| 2OG-Fe(II) oxygenase [Enterobacter cloacae SCF1]
Length = 223
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D Y P G P +P F + +A ++ G D
Sbjct: 68 LGWTTDAGGYLYAPGDPLTGNPWPAMPALFRRFALEAAGEA---------GYADF----- 113
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G + +
Sbjct: 114 --TPDACLINRYAPGAKLSLHQDKDEK----DLRAPIVSVSLGLPAVFQFGGAKRNDPLR 167
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+V+LE GDV+++GG SR +HG++ + P + R NLTFR
Sbjct: 168 RVLLEHGDVVVWGGASRLFYHGIQPLKSGHHPATGAY-------RYNLTFR 211
>gi|254476089|ref|ZP_05089475.1| 2OG-Fe(II) oxygenase [Ruegeria sp. R11]
gi|214030332|gb|EEB71167.1| 2OG-Fe(II) oxygenase [Ruegeria sp. R11]
Length = 200
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y ++GLHQDKDE+ D PVVS S+GD G+ V
Sbjct: 100 PDCCLINYYGEGARMGLHQDKDEA----DFSFPVVSISLGDDGLLRIGNQSRGGKTDTVW 155
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTA---PKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG++R +HGV++I ++ PK GR+NLT R
Sbjct: 156 LNSGDVVLMGGEARLTYHGVDRIRFKSSRLLPKG---------GRINLTLR 197
>gi|187929908|ref|YP_001900395.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12J]
gi|187726798|gb|ACD27963.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12J]
Length = 218
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y T P A P +P F +L A EA
Sbjct: 71 ALGWTSDRRGYRYATHDPLTEAAWPPLPDVFLRLAHSAAA----------------EAGF 114
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
+PD C+ N Y ++ LHQDKDE D P+VS S+G A FL+G R
Sbjct: 115 HGFTPDACLINRYVPGARMSLHQDKDEQ----DYGAPIVSVSLGMPAVFLFGGHRRADRP 170
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++ L GDV+++GG R +HG+ + P ++L R+NLTFR+
Sbjct: 171 QRIPLFHGDVVVWGGPDRLRYHGIAPL--KDHPHAMLGSQ-----RINLTFRK 216
>gi|421494610|ref|ZP_15941955.1| hypothetical protein MU9_3126 [Morganella morganii subsp. morganii
KT]
gi|455739382|ref|YP_007505648.1| Alkylated DNA repair protein AlkB [Morganella morganii subsp.
morganii KT]
gi|400191126|gb|EJO24277.1| hypothetical protein MU9_3126 [Morganella morganii subsp. morganii
KT]
gi|455420945|gb|AGG31275.1| Alkylated DNA repair protein AlkB [Morganella morganii subsp.
morganii KT]
Length = 211
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 357 NDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQP--GYRDGANLYLKMMCL 414
+D L++ + ++ + +E+ + +I R + P Q GYR A + C
Sbjct: 7 HDEPLAVAPDAYLLKGFLSDEDEMLLAEIRRLTAISPFRHMQTPGGYRMSAAM---SSCG 63
Query: 415 GKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
W D + +Y + P G P +P F L +A + A
Sbjct: 64 TYGWVSDAKGYRYSPTDPLTGNPWPPLPDAFLLLSQQAAE----------------RAGF 107
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
SPD C+ N Y+ + LHQDKDE D+ P+VSFS+G +F +G
Sbjct: 108 HGFSPDSCLINCYAPGAGMSLHQDKDEP----DRRQPIVSFSLGLPVQFQFGGSERHHPL 163
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
K LE GDVL++GG+SR +H V + P + R NLTFR
Sbjct: 164 KTFALEHGDVLVWGGRSRLNYHAVRPVRAGVHPLAGAR-------RFNLTFR 208
>gi|221232948|ref|YP_002515384.1| alkylated DNA repair protein AlkB [Caulobacter crescentus NA1000]
gi|220962120|gb|ACL93476.1| alkylated DNA repair protein AlkB [Caulobacter crescentus NA1000]
Length = 206
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y ++GLHQD+DE+ D PV+S S+GD+A F G +
Sbjct: 100 PETPPDSCLVNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPT 155
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + L SGDV G +R FHGV++I P ++ SL+ GR+NLT R+
Sbjct: 156 RSLRLASGDVCRLLGPARLAFHGVDRILPGSS--SLVPGG----GRINLTLRR 202
>gi|161170285|gb|ABX59255.1| alkylation damage repair protein AlkB [uncultured marine bacterium
EB000_55B11]
gi|297183813|gb|ADI19936.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 205
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 87/184 (47%), Gaps = 34/184 (18%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + +KM GK W D E +Y +P +G P IP + K + IE+
Sbjct: 50 GNKMSVKMTSAGKYGWFSDGEGYRYIDCQP-NGNNWPQIPGSILNIWKKFVS-----IER 103
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
I PD C+ N+YS K+GLHQD DE+ D PV+S S+GD A
Sbjct: 104 I---------------PDCCLINYYSENAKMGLHQDNDEA----DFNWPVLSISLGDDAL 144
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F G+ + L SGD+++ GG +R HGV++I T+ LL+ GR+N
Sbjct: 145 FRIGNNKKGGKTDSFWLNSGDIVLMGGDARLKHHGVDRIRFGTS--RLLKNG----GRIN 198
Query: 581 LTFR 584
LT R
Sbjct: 199 LTLR 202
>gi|83941926|ref|ZP_00954388.1| alkylated DNA repair protein, putative [Sulfitobacter sp. EE-36]
gi|83847746|gb|EAP85621.1| alkylated DNA repair protein, putative [Sulfitobacter sp. EE-36]
Length = 200
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 48/227 (21%)
Query: 361 LSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGK-NW- 418
L++ A+ ++A G+ ++V F++P G + ++M G W
Sbjct: 16 LTLSAQRGLLDAVRGVVKQVP--------------FFRPVMPSGQQMSVRMTSAGDYGWL 61
Query: 419 -DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSP 477
D + +Y + P +G P IP E AI + +E+ P
Sbjct: 62 SDTQGYRYAPTHP-NGTPWPAIPPEV-----LAIWNDLTGLER---------------QP 100
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
+ C+ N+Y++ K+GLHQDK+E+ D PVVS S+GD G + L
Sbjct: 101 ESCLINYYASDAKMGLHQDKNET----DFRWPVVSISLGDEGMLRVGGQTRGGKTDSLWL 156
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+SGDV++ GG++R +HG+++I ++ +LL + GR+N+T R
Sbjct: 157 QSGDVVVMGGEARLNYHGIDRIRAGSS--TLLPKG----GRINITLR 197
>gi|323136455|ref|ZP_08071537.1| 2OG-Fe(II) oxygenase [Methylocystis sp. ATCC 49242]
gi|322398529|gb|EFY01049.1| 2OG-Fe(II) oxygenase [Methylocystis sp. ATCC 49242]
Length = 207
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N YS K+GLHQD+DE+ D P++S S+G F R + +
Sbjct: 102 PEACLVNVYSDDAKMGLHQDRDEA----DFDAPILSLSLGADCRFRLSGPRRADKSIAFV 157
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L +GD L+ G SRR FHGV++I P T L + R+NLT R+
Sbjct: 158 LAAGDALVLSGPSRRSFHGVDRILP-TVHAELPAPLAGVGARVNLTLRR 205
>gi|16124265|ref|NP_418829.1| DNA alkylation damage repair protein AlkB [Caulobacter crescentus
CB15]
gi|239977066|sp|P0CAT7.1|ALKB_CAUCR RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB
homolog; AltName: Full=DNA oxidative demethylase AlkB
gi|239977078|sp|B8GWW6.2|ALKB_CAUCN RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB
homolog; AltName: Full=DNA oxidative demethylase AlkB
gi|13421095|gb|AAK21997.1| DNA alkylation damage repair protein AlkB [Caulobacter crescentus
CB15]
Length = 220
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y ++GLHQD+DE+ D PV+S S+GD+A F G +
Sbjct: 114 PETPPDSCLVNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPT 169
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + L SGDV G +R FHGV++I P ++ SL+ GR+NLT R+
Sbjct: 170 RSLRLASGDVCRLLGPARLAFHGVDRILPGSS--SLVPGG----GRINLTLRR 216
>gi|395762214|ref|ZP_10442883.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Janthinobacterium
lividum PAMC 25724]
Length = 220
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y ++ LHQD+DE D P+VS S+G A FL+G A
Sbjct: 117 PGFTPDACLVNRYVPGARMALHQDRDEC----DFTAPIVSVSLGLPAIFLFGGAARADKA 172
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG R FHGV AP E + R+NLTFR+
Sbjct: 173 ARIALLHGDVVVWGGADRLRFHGV-------APLKEGEHALLGAQRINLTFRK 218
>gi|159477217|ref|XP_001696707.1| hypothetical protein CHLREDRAFT_175411 [Chlamydomonas reinhardtii]
gi|158275036|gb|EDP00815.1| predicted protein [Chlamydomonas reinhardtii]
Length = 218
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 368 NYIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGT 427
N + + ++E++KIV+ R+LGLGPGGFY P Y G L L+MMCLG +W+P TS+Y
Sbjct: 139 NQEQGFLSMSEQIKIVQAVRELGLGPGGFYPPSYSGGGRLQLRMMCLGLHWEPRTSKYEA 198
Query: 428 SRPTDGAVPP 437
+R G P
Sbjct: 199 TRRPAGVWWP 208
>gi|123443816|ref|YP_001007787.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090777|emb|CAL13659.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 221
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y KL LHQDKDE +D P+VS S+G A F +G A ++V+
Sbjct: 117 PDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAVFQFGGASREAKCQRVL 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +HGV I +P + R+NLTFR+
Sbjct: 173 LSEGDVVVWGGPSRLNYHGVLPIKAGFSPAA-------GAYRINLTFRR 214
>gi|86748824|ref|YP_485320.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris HaA2]
gi|86571852|gb|ABD06409.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris HaA2]
Length = 223
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD C+ N Y+ K+ LHQDKDE D P+VS S+G A F +G + ++
Sbjct: 123 TPDACLINRYAPGAKMALHQDKDEQ----DFAAPIVSVSLGLPAVFQFGGMARSDKPRRF 178
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG++R ++HGV + P + R R+NLTFR+
Sbjct: 179 ELRHGDVLVWGGETRLVYHGVLALKDGEHPL-------LGRQRINLTFRK 221
>gi|316935118|ref|YP_004110100.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris DX-1]
gi|315602832|gb|ADU45367.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris DX-1]
Length = 216
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R EA PD C+ N Y ++ LHQDKDE +D P+VS S+G A F +G
Sbjct: 105 RASAEAGFAGFDPDACLINRYVPGARMALHQDKDE----VDFSAPIVSVSLGLPATFQFG 160
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ ++ L GDV ++GG SR ++HGV + E + R R+NLTFR
Sbjct: 161 GMARSDKPRRYELRHGDVFVWGGPSRLVYHGVLTLQDG-------EHPLLGRQRINLTFR 213
Query: 585 Q 585
+
Sbjct: 214 K 214
>gi|400756111|ref|YP_006564479.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis 2.10]
gi|398655264|gb|AFO89234.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis 2.10]
Length = 229
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 34/192 (17%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
+ P G + ++M G W D + +Y PT G P IP E
Sbjct: 66 LFSPEVPGGGKMSVRMTSAGAYGWVSDRDGYRYEERHPT-GRRWPEIPSEILD------- 117
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
I +++TG +E + PD C+ N+Y ++GLHQDKDE+ D PVVS
Sbjct: 118 -----IWRVTTG---LERQ-----PDCCLINYYGEGARMGLHQDKDEA----DFSYPVVS 160
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+GD G+ V L SGDV++ GG +R +HGV++I ++ LL +
Sbjct: 161 VSLGDDGLLRIGNQSRGGKTDTVWLNSGDVVVMGGDARLTYHGVDRIRFKSS--RLLPKG 218
Query: 573 SMRRGRLNLTFR 584
GR+NLT R
Sbjct: 219 ----GRINLTLR 226
>gi|242240587|ref|YP_002988768.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech703]
gi|242132644|gb|ACS86946.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech703]
Length = 217
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ KL LHQDKDE D P+VS S+G SA FL+G L ++ +
Sbjct: 117 PDACLINRYAVGSKLSLHQDKDEQ----DLTQPIVSVSLGLSAVFLFGGLTRSEPCQRKV 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R +H + + P + ++ R NLTFR+
Sbjct: 173 LSHGDVVVWGGPARLCYHAILPLKRGPLPTGMSDDV-----RFNLTFRK 216
>gi|319794532|ref|YP_004156172.1| 2og-fe(ii) oxygenase [Variovorax paradoxus EPS]
gi|315596995|gb|ADU38061.1| 2OG-Fe(II) oxygenase [Variovorax paradoxus EPS]
Length = 215
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y + P G P +P F +L +A A
Sbjct: 68 ALGWTSDRRGYRYSPTDPDTGKSWPAMPASFARLAREAAS----------------VAGF 111
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
+PD C+ N Y+ +L LHQDKDE D P+VS S+G A FL+G A
Sbjct: 112 DGFAPDACLVNRYAPGARLSLHQDKDEH----DYGAPIVSVSLGMPAVFLFGGRARGDKA 167
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L+ GDV+++GG+ R +HGV + P+ L R+NLTFR+
Sbjct: 168 VRIPLQHGDVVVWGGEDRLRYHGVLPL--KDQPRPALGSV-----RINLTFRK 213
>gi|71735492|ref|YP_274464.1| alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416016074|ref|ZP_11563532.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. B076]
gi|416026717|ref|ZP_11570094.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. race
4]
gi|71556045|gb|AAZ35256.1| alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320324743|gb|EFW80817.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. B076]
gi|320328850|gb|EFW84849.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. race
4]
Length = 228
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G V P +P F QL A + G +
Sbjct: 79 LGWITDRHGYRYTATDPQTGLVWPAMPDVFMQLAKDAAH---------AAGYAEF----- 124
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G L +
Sbjct: 125 --MPDACLINRYIPGAKMSLHQDKNE----YDHRWPVVSVSLGIPATFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAEHPLLGEQ-----RINLTFRK 223
>gi|422405368|ref|ZP_16482412.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330880213|gb|EGH14362.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 228
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G V P +P F QL A A
Sbjct: 79 LGWITDRHGYRYTATDPQTGLVWPAMPDVFMQLAKDAAH----------------AAGYA 122
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G L +
Sbjct: 123 EFMPDACLINRYIPGAKMSLHQDKNE----YDHRWPVVSVSLGIPATFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ + A LL E R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGILPV--KQAEHPLLGEQ-----RINLTFRK 223
>gi|399071677|ref|ZP_10750069.1| alkylated DNA repair protein [Caulobacter sp. AP07]
gi|398043193|gb|EJL36120.1| alkylated DNA repair protein [Caulobacter sp. AP07]
Length = 205
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 467 DIEAEL--PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
D+ A L P + PD C+ N Y ++GLHQD+DE+ D PV+S S+GD+A F G
Sbjct: 91 DLWAALGDPEIPPDSCLINLYRDEARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIG 146
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ + L SGDV G +R FHGV++I P ++ L+ GR+NLT R
Sbjct: 147 GPSRKDPTRSLRLSSGDVCRLSGPARLAFHGVDRILPGSS--GLVPGG----GRINLTLR 200
Query: 585 Q 585
+
Sbjct: 201 R 201
>gi|99079852|ref|YP_612006.1| DNA-N1-methyladenine dioxygenase [Ruegeria sp. TM1040]
gi|99036132|gb|ABF62744.1| DNA-N1-methyladenine dioxygenase [Ruegeria sp. TM1040]
Length = 200
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y ++GLHQDKDE+ D PVVS S+GD G + V
Sbjct: 100 PDCCLFNYYGEGARMGLHQDKDEA----DFSFPVVSISLGDDGLLRLGGTSRKEKTQTVW 155
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG++R +HG+++I ++ LL + GR+NLT R
Sbjct: 156 LNSGDVVVMGGEARLAYHGIDRIRFRSS--RLLPKG----GRVNLTLR 197
>gi|334564542|ref|ZP_08517533.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
bovis DSM 20582]
Length = 206
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 413 CLGKNWDPETSQYGTS--RPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y S PT G P +P EF RAL + GR A
Sbjct: 54 CGDHGWVTDRSGYRYSPVDPTTGRPWPPMPPEF-----------RALAADFA-GR----A 97
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y+ K+GLHQD+DE P+VS S+G + F +G
Sbjct: 98 GFPGFEPDSCLVNRYARDAKMGLHQDRDEESGR----WPIVSVSVGLTGRFAFGGHARTD 153
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L SGDV+++GG R FHG+++ T P R NLT R+
Sbjct: 154 PVRRVDLHSGDVVVWGGVDRFRFHGIDRATGPTDP-------VFGDHRYNLTLRR 201
>gi|410086063|ref|ZP_11282777.1| Alkylated DNA repair protein AlkB [Morganella morganii SC01]
gi|409767611|gb|EKN51687.1| Alkylated DNA repair protein AlkB [Morganella morganii SC01]
Length = 211
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
Query: 357 NDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQP--GYRDGANLYLKMMCL 414
+D L++ + ++ + +E+ + +I R + P Q GYR A + C
Sbjct: 7 HDEPLAVAPDAYLLKGFLSDEDEMLLAEIRRLTAISPFRHMQTPGGYRMSAAM---SSCG 63
Query: 415 GKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
W D +Y + P G P +P F L +A + A
Sbjct: 64 TYGWISDARGYRYSPADPLTGNPWPPLPDAFLSLSQQAAE----------------RAGF 107
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
SPD C+ N Y+ + LHQD+DE D+ P+VSFS+G +F +G
Sbjct: 108 HGFSPDSCLINCYAPGAGMSLHQDRDEP----DRRQPIVSFSLGLPVQFQFGGSERHHPL 163
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
K LE GDVL++GG+SR +H V + P + R NLTFR
Sbjct: 164 KTFALEHGDVLVWGGRSRLNYHAVRPLRAGVHPLAGAR-------RFNLTFR 208
>gi|365859362|ref|ZP_09399232.1| putative alkylated DNA repair protein AlkB [Acetobacteraceae
bacterium AT-5844]
gi|363712721|gb|EHL96398.1| putative alkylated DNA repair protein AlkB [Acetobacteraceae
bacterium AT-5844]
Length = 214
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y + P G + P +P F L +A
Sbjct: 65 CGALGWVSDRRGYRYQPNDPETGRLWPAMPAAFLDLAQRAAA----------------AG 108
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P +PD C+ N Y+ +L LHQDK+E D P+VS S+G A FL+G L
Sbjct: 109 GFPGFTPDACLINRYTPGARLTLHQDKNER----DFSAPIVSVSLGLPATFLFGGLERTD 164
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+V L GDV+++GG +R +HG+ + P+ + R+N+TFR
Sbjct: 165 PQDRVALHHGDVVVWGGPTRLAYHGILPLKEGDHPR-------LGPCRINMTFR 211
>gi|365895915|ref|ZP_09434009.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3843]
gi|365423287|emb|CCE06551.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3843]
Length = 217
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y K+ LHQD+DE P+VS S+G A FL+G L+ ++
Sbjct: 116 FAPDACLINRYEPGAKMSLHQDRDERNMGA----PIVSISLGLPAIFLFGGLKRSDKPQR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDV+++GG +R FHGV P + E + R R+NLTFR+
Sbjct: 172 YRLQHGDVVVWGGPARLAFHGV-------MPLADGEHGLIDRKRINLTFRR 215
>gi|238762402|ref|ZP_04623373.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
kristensenii ATCC 33638]
gi|238699387|gb|EEP92133.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
kristensenii ATCC 33638]
Length = 221
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N Y KL LHQDKDE +D P+VS S+G A F +G A +KV+
Sbjct: 117 PNACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAVFQFGGASREAKCQKVL 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GDV+++GG SR +HGV + +P S R+NLTFR
Sbjct: 173 LSEGDVVVWGGPSRLNYHGVLPVKAGFSP-------SAGAYRINLTFR 213
>gi|349699624|ref|ZP_08901253.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
europaeus LMG 18494]
Length = 223
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++GLHQD DE ++ PVVS S G A F +G L+ +++
Sbjct: 120 PDTCLINGYRPGARMGLHQDDDERTDA-----PVVSVSFGLPAMFQWGGLQRTDPVRRIP 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKI----FPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +FHG+ + P T P R NLTFR+
Sbjct: 175 LLHGDVVVWGGPSRLVFHGIAALRAGQHPVTGPC-----------RYNLTFRR 216
>gi|344167472|emb|CCA79701.1| Alpha-ketoglutarate-dependent dioxygenase alkB (Alkylated DNA
repair protein alkB) [blood disease bacterium R229]
Length = 218
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 111 EAGFPGFTPDACLINRYVPGARLSLHQDKDEQ----DYGAPIVSVSLGIPAVFLWGGHRR 166
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV + A LL R+NLT R+
Sbjct: 167 TDKTQRVPLFHGDVVVWGGPDRLRYHGVLPL--KEAGHPLLGAQ-----RINLTLRR 216
>gi|161502579|ref|YP_001569691.1| hypothetical protein SARI_00625 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160863926|gb|ABX20549.1| hypothetical protein SARI_00625 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 216
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L ++
Sbjct: 112 FQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLHRSDPLQR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++LE GD++++G +SR +HG++ + P + R NLTFRQ
Sbjct: 168 ILLEHGDIVVWGSESRLFYHGIQTLKAGFHPMT-------GEFRYNLTFRQ 211
>gi|398802226|ref|ZP_10561442.1| alkylated DNA repair protein [Polaromonas sp. CF318]
gi|398100695|gb|EJL90928.1| alkylated DNA repair protein [Polaromonas sp. CF318]
Length = 217
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQDKDE +D P+VS S+G A FL+G L +
Sbjct: 118 PDACLINRYEPGARLSLHQDKDEGH--LDA--PIVSVSLGLPAVFLFGGLNRGDRPARYR 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV ++GG SR +HGV AP + E + R R+NLTFR+
Sbjct: 174 LLHGDVAVWGGPSRLAYHGV-------APLAEGEHARLGRQRINLTFRR 215
>gi|108763595|ref|YP_634074.1| alkylated DNA repair protein AlkB [Myxococcus xanthus DK 1622]
gi|108467475|gb|ABF92660.1| alkylated DNA repair protein AlkB [Myxococcus xanthus DK 1622]
Length = 215
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 47/223 (21%)
Query: 374 YGITEEVKIVKICRDLGLG--------PGGFYQPGYRDGANLYLKMM-CLGKNW--DPET 422
+ ++ + +++ +D+ L PGGF + + M C W D
Sbjct: 27 FALSHDAELLSAVQDVALASPFRHMETPGGF---------RMSVAMTSCGSWGWVTDRTG 77
Query: 423 SQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIA 482
+Y P G P +P F +L + + + E +P D C+
Sbjct: 78 YRYAAVDPVQGRPWPEMPAIFLRLA------------QFAAAKAGFEGFIP----DACLV 121
Query: 483 NFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDV 542
N Y K+ LHQDKDE D P+VS S+G A FL+G +V L GDV
Sbjct: 122 NRYEPGAKMSLHQDKDER----DFTAPIVSVSLGLPAVFLFGGAERADRPARVRLSHGDV 177
Query: 543 LIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++GG +R +HGV + P P+ + R+NLTFR+
Sbjct: 178 VVWGGPARLRYHGVTPLEPGHHPQ-------VGGHRINLTFRK 213
>gi|399994567|ref|YP_006574807.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398659122|gb|AFO93088.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 229
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N+Y ++GLHQDKDE+ D PVVS S+GD G+ V
Sbjct: 129 PDCCLINYYGEGARMGLHQDKDEA----DFSYPVVSVSLGDDGLLRIGNQSRGGKTDTVW 184
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SGDV++ GG +R +HGV++I ++ LL + GR+NLT R
Sbjct: 185 LNSGDVVVMGGDARLTYHGVDRIRFKSS--RLLPKG----GRINLTLR 226
>gi|352082119|ref|ZP_08952942.1| 2OG-Fe(II) oxygenase [Rhodanobacter sp. 2APBS1]
gi|351682257|gb|EHA65363.1| 2OG-Fe(II) oxygenase [Rhodanobacter sp. 2APBS1]
Length = 218
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y A +L LHQD+DE D P+VS S+G A FL+G L+ ++V
Sbjct: 119 PDACLVNRYEAGTRLSLHQDRDEH----DLGQPIVSVSLGIPAVFLFGGLQRSDYPQRVP 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R +HGV + P+ + R+NLTFR+
Sbjct: 175 LAHGDVVVWGGPARLRYHGVLPLKPN-------HHAVLGDCRINLTFRR 216
>gi|320108057|ref|YP_004183647.1| 2OG-Fe(II) oxygenase [Terriglobus saanensis SP1PR4]
gi|319926578|gb|ADV83653.1| 2OG-Fe(II) oxygenase [Terriglobus saanensis SP1PR4]
Length = 217
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQDK+E D P+VS S+G A FL+G L
Sbjct: 113 FPNFVPDACLINRYEPGARLSLHQDKNER----DFTQPIVSVSLGLPATFLFGGLERGDK 168
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ + GDVL++GG +R +HG+ AP E + R R NLTFR
Sbjct: 169 TQRIQVIHGDVLVWGGSARLCYHGI-------APLKEGEYPRLGRVRYNLTFR 214
>gi|389796691|ref|ZP_10199742.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter sp.
116-2]
gi|388448216|gb|EIM04201.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter sp.
116-2]
Length = 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y A +L LHQD+DE D P+VS S+G A FL+G L+ ++V
Sbjct: 119 PDACLVNRYEAGTRLSLHQDRDEH----DLGQPIVSVSLGIPAVFLFGGLQRSDYPQRVP 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R +HGV + P+ + R+NLTFR+
Sbjct: 175 LAHGDVVVWGGPARLRYHGVLPLKPN-------HHAVLGDCRINLTFRR 216
>gi|344172262|emb|CCA84894.1| alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia syzygii
R24]
Length = 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 111 EAGFPGFTPDACLINRYVPGARLSLHQDKDEQ----DYGAPIVSVSLGIPAVFLWGGHRR 166
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV + A LL R+NLT R+
Sbjct: 167 TDKTQRVPLFHGDVVVWGGPDRLRYHGVLPL--KEAGHPLLGAQ-----RINLTLRR 216
>gi|417467414|ref|ZP_12165138.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353629678|gb|EHC77430.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 102
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
D C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR ++++L
Sbjct: 1 DACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAIFQFGGLRRSDPLQRILL 56
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
E GD++++GG+SR +HG++ + P + R NLTFRQ
Sbjct: 57 EHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 97
>gi|300690564|ref|YP_003751559.1| alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum PSI07]
gi|299077624|emb|CBJ50259.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum PSI07]
Length = 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 111 EAGFPGFTPDACLINRYVPGARLSLHQDKDEQ----DYGAPIVSVSLGIPAVFLWGGHRR 166
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV + A LL R+NLT R+
Sbjct: 167 TDKTQRVPLFHGDVVVWGGPDRLRYHGVLPL--KEAGHPLLGAQ-----RINLTLRR 216
>gi|398809844|ref|ZP_10568685.1| alkylated DNA repair protein [Variovorax sp. CF313]
gi|398084936|gb|EJL75607.1| alkylated DNA repair protein [Variovorax sp. CF313]
Length = 227
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y+ +L LHQD+DE D P+VS S+G A FL+G L A +
Sbjct: 126 FAPDACLVNRYAPGARLSLHQDRDER----DYGAPIVSVSLGMPAVFLFGGLARGGKAVR 181
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG+ R +HGV + P LL R+NLTFR+
Sbjct: 182 IPLIHGDVVVWGGEDRLRYHGVLPL--KDEPHPLLGAI-----RINLTFRK 225
>gi|192290315|ref|YP_001990920.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris TIE-1]
gi|192284064|gb|ACF00445.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris TIE-1]
Length = 216
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE+ D P+VS S+G A F +G + ++
Sbjct: 117 PDACLINRYVPGAKMALHQDKDEA----DFLAPIVSVSLGLPATFQFGGMARSDKPRRYE 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG SR ++HGV + E + R R+NLTFR+
Sbjct: 173 LRHGDVLVWGGPSRLVYHGVLTLKDG-------EHPLLGRQRINLTFRK 214
>gi|296114878|ref|ZP_06833526.1| 2OG-Fe(II) oxygenase [Gluconacetobacter hansenii ATCC 23769]
gi|295978584|gb|EFG85314.1| 2OG-Fe(II) oxygenase [Gluconacetobacter hansenii ATCC 23769]
Length = 220
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C + W D +Y T P G P +P L G+ Q +A
Sbjct: 72 CGARVWVSDAAGYRYETHDPRTGRPWPPMPALLRDLAGECAQ----------------KA 115
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD + N Y ++GLHQD+DE ++ P+VS S+G +A FL+G A
Sbjct: 116 GYARFVPDSGLINRYGPGDRMGLHQDRDERCDA-----PIVSISLGVAAVFLWGGPTRAA 170
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++++ GDV+++GG SR +HG+ AP L R NLTFR
Sbjct: 171 PVRRIVVRHGDVVVWGGASRLTWHGI-------APLLLAHHPLCGDVRYNLTFR 217
>gi|229590437|ref|YP_002872556.1| alkylated DNA repair protein [Pseudomonas fluorescens SBW25]
gi|229362303|emb|CAY49205.1| alkylated DNA repair protein [Pseudomonas fluorescens SBW25]
Length = 221
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y K+ LHQDK+E + S PVVS S+G A FL+G A A+K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERRYS----EPVVSVSLGLPAIFLFGGHERSAKAQK 175
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L GDV+++GG R FHGV I P M R+NLTFR
Sbjct: 176 VSLFHGDVVVWGGVDRLRFHGVMPIKDGVHP-------VMGPQRINLTFR 218
>gi|145350946|ref|XP_001419853.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580085|gb|ABO98146.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 348
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLP-VVSFSIGDSAEFLYGDLRDVANAK 533
M+P C+ NFY + H+D ++ + + P +VSFS+G S +F Y D K
Sbjct: 212 MNPTTCLVNFYKDGAEFKWHKDSEDPKLVKSRTGPPIVSFSVGLSGDFGYKYSFDDPEHK 271
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L SGDVL+FGG SR I H V ++P + P L M GRLN+T R
Sbjct: 272 VVRLNSGDVLLFGGPSRMIVHSVLNVYPGSMPGHL--RGKMLNGRLNVTVR 320
>gi|259417948|ref|ZP_05741867.1| hypothetical protein SCH4B_3373 [Silicibacter sp. TrichCH4B]
gi|259346854|gb|EEW58668.1| hypothetical protein SCH4B_3373 [Silicibacter sp. TrichCH4B]
Length = 200
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 396 FYQPGYRDGANLYLKMMCLGK-NWDPETSQYGTS-RPTDGAVPPIIPVEFHQLVGKAIQD 453
+ P G + ++M G W + S Y + R G P IP E ++ I
Sbjct: 37 LFSPEVPGGGQMSVRMTSAGAFGWFSDKSGYRYADRHPSGQAWPEIPAEVLKIWTALIDR 96
Query: 454 SRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSF 513
R PD C+ N+Y ++GLHQDKDE+ D PVVS
Sbjct: 97 DRM--------------------PDCCLFNYYGEGARMGLHQDKDEA----DFSYPVVSI 132
Query: 514 SIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS 573
S+GD G + + L SGDV++ GG +R +HGV++I ++ LL +
Sbjct: 133 SLGDDGLLRVGGTSRKEKTESIWLNSGDVVVMGGDARLAYHGVDRIRFRSS--RLLPKG- 189
Query: 574 MRRGRLNLTFR 584
GR+NLT R
Sbjct: 190 ---GRVNLTLR 197
>gi|114799223|ref|YP_760234.1| alkylated DNA repair protein AlkB [Hyphomonas neptunium ATCC 15444]
gi|114739397|gb|ABI77522.1| alkylated DNA repair protein AlkB [Hyphomonas neptunium ATCC 15444]
Length = 216
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y KL LHQD++E + + P+VS S+G A F +G LR +K
Sbjct: 117 PDTCLINRYEPGAKLSLHQDRNEREFA----HPIVSVSLGLPATFQFGGLRRADPIRKYA 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GDV ++GG SR HGV + PK + R RLNLTFR
Sbjct: 173 LRHGDVAVWGGPSRLCHHGVLALKEGAHPK-------LGRMRLNLTFR 213
>gi|414166572|ref|ZP_11422804.1| alkylated DNA repair protein AlkB [Afipia clevelandensis ATCC
49720]
gi|410892416|gb|EKS40208.1| alkylated DNA repair protein AlkB [Afipia clevelandensis ATCC
49720]
Length = 215
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y T+ P G P +P F L +A G D PD C+ N
Sbjct: 79 RYDTNDPDSGLPWPSMPETFADLALRAAD---------GAGFADFR-------PDACLIN 122
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y KL LHQDKDE +D P+VS S+G A FL+G L + L GDV+
Sbjct: 123 RYEPGAKLSLHQDKDE----LDFNAPIVSVSLGLPATFLFGGLNRNDKTTRYRLAHGDVV 178
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++GG +R +HGV P + E + R+NLTFR+
Sbjct: 179 VWGGSARLAYHGV-------MPLADGEHPLLGNQRINLTFRK 213
>gi|414341168|ref|YP_006982689.1| alkylated DNA repair protein AlkB [Gluconobacter oxydans H24]
gi|411026503|gb|AFV99757.1| alkylated DNA repair protein AlkB [Gluconobacter oxydans H24]
Length = 218
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 446 LVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESID 505
L GK + AL ++ EA P SP C+ N Y K+GLHQD+DE D
Sbjct: 83 LTGKPWPEMPALFLDLAR-EAAAEAGYPDFSPASCLINRYEPGAKMGLHQDRDED----D 137
Query: 506 KCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAP 565
P+VS S+G A F +G L + ++ L GDV+++GG SR +HGV + P
Sbjct: 138 LASPIVSVSLGVPARFAFGGLLKMDPVQRYDLLHGDVVVWGGVSRLAWHGVSPVRETFHP 197
Query: 566 KSLLEETSMRRGRLNLTFR 584
++ +M R NLTFR
Sbjct: 198 QT----GAM---RYNLTFR 209
>gi|187479591|ref|YP_787616.1| alkylated DNA repair protein [Bordetella avium 197N]
gi|115424178|emb|CAJ50731.1| alkylated DNA repair protein [Bordetella avium 197N]
Length = 213
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQD++E D P+VS S+G A FL+G +R +++
Sbjct: 114 PDACLINHYAPGARMSLHQDRNER----DFEAPIVSVSLGLPAVFLFGGMRREDRPGRIV 169
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV ++GG R FHGV P + E + R R+NLT RQ
Sbjct: 170 LHHGDVAVWGGVDRLRFHGV-------LPLADGEHPLLGRQRINLTLRQ 211
>gi|89902774|ref|YP_525245.1| 2OG-Fe(II) oxygenase [Rhodoferax ferrireducens T118]
gi|89347511|gb|ABD71714.1| DNA-N1-methyladenine dioxygenase [Rhodoferax ferrireducens T118]
Length = 216
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R +A +PD C+ N Y KL LHQDKDE D P+VS S+G A FL+G
Sbjct: 105 RAAAQAGYANFTPDACLINEYLPGAKLSLHQDKDEK----DLRAPIVSLSLGLPAVFLFG 160
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++ L GDV+++GG SR +HGV + E + R RLNLTFR
Sbjct: 161 TPSRKDRPQRWRLVHGDVVVWGGPSRLAYHGVAALADG-------EHALLGRRRLNLTFR 213
>gi|38232967|ref|NP_938734.1| alkylated DNA repair protein [Corynebacterium diphtheriae NCTC
13129]
gi|376247629|ref|YP_005139573.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC04]
gi|376250446|ref|YP_005137327.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC03]
gi|376256263|ref|YP_005144154.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
VA01]
gi|38199225|emb|CAE48855.1| Putative alkylated DNA repair protein [Corynebacterium diphtheriae]
gi|372111950|gb|AEX78009.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC03]
gi|372114197|gb|AEX80255.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC04]
gi|372118780|gb|AEX82514.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
VA01]
Length = 232
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V+ I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
Y + R D +P L A + RA E +E P+
Sbjct: 73 -----HYPSYRYIDKIAGTTVPPVPDSLAALAPEALRAAAEVAEELAPWVE----TFVPE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y ++G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSRMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|58040199|ref|YP_192163.1| alkylated DNA repair protein AlkB [Gluconobacter oxydans 621H]
gi|58002613|gb|AAW61507.1| Alkylated DNA repair protein AlkB [Gluconobacter oxydans 621H]
Length = 217
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W DP +Y + P G P +P L +A EA
Sbjct: 62 CGACGWIADPSGYRYSRTDPQSGQPWPAMPDALRHLAVRAAA----------------EA 105
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P C+ N Y K+GLHQD+DE PVVS S+G A F +G LR
Sbjct: 106 GYASFDPASCLINRYGPGAKMGLHQDRDEGMPEA----PVVSVSLGVPARFSFGGLRRTD 161
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ + L GDV+++GG SR +HGV I ++ ++T R NLTFR
Sbjct: 162 PKRIIELLDGDVVVWGGVSRFAWHGVSPI-----RETFHQQTGAM--RYNLTFR 208
>gi|387888633|ref|YP_006318931.1| DNA repair system specific for alkylated DNA [Escherichia blattae
DSM 4481]
gi|414592700|ref|ZP_11442349.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia blattae
NBRC 105725]
gi|386923466|gb|AFJ46420.1| DNA repair system specific for alkylated DNA [Escherichia blattae
DSM 4481]
gi|403196181|dbj|GAB80001.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia blattae
NBRC 105725]
Length = 216
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 461 ISTGRKDIE-AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSA 519
++ G++ E A P PD C+ N Y ++ LHQDKDE D P+VS S+G +A
Sbjct: 97 LTLGQQAAESAGFPGFMPDSCLINRYLPGARMALHQDKDER----DLRAPIVSVSLGLTA 152
Query: 520 EFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRL 579
FL+G L +++ LE DV+++GG +R +HG+ + P E + R
Sbjct: 153 RFLFGGLSRRDPVRQIPLEHCDVVVWGGPARLAYHGIMPVRPG-------EHPLVGGVRY 205
Query: 580 NLTFRQ 585
NLT RQ
Sbjct: 206 NLTLRQ 211
>gi|399000076|ref|ZP_10702807.1| alkylated DNA repair protein [Pseudomonas sp. GM18]
gi|398130488|gb|EJM19825.1| alkylated DNA repair protein [Pseudomonas sp. GM18]
Length = 226
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P GA P +P F +L A + EA
Sbjct: 77 CGIWGWTTDRSGYQYTRNDPQTGAPWPEMPEVFFELAQAAAR----------------EA 120
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y ++ LHQDK+E+ + P+VS S+G A FL+G A
Sbjct: 121 GFMAFVPDSCLINRYVPGARMSLHQDKNENAYTA----PIVSVSLGLPATFLFGGFERSA 176
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++V L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 177 KTRRVPLFHGDIVVWGGVDRLRYHGVLPIKDGQHPR-------LGEQRINFTFR 223
>gi|319761490|ref|YP_004125427.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans BC]
gi|317116051|gb|ADU98539.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans BC]
Length = 217
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y ++ LHQD+DE D P+VS S+G A FL+G A +
Sbjct: 116 FAPDACLVNRYEPGARMSLHQDRDER----DLAAPIVSVSLGLPAVFLWGGATRGERALR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L GDV+++GG R FHGV + P E + R+NLT R+
Sbjct: 172 VPLHHGDVVVWGGVDRLRFHGVLPVAPG-------EHPATGSCRINLTLRK 215
>gi|268589554|ref|ZP_06123775.1| alkylated DNA repair protein AlkB [Providencia rettgeri DSM 1131]
gi|291315221|gb|EFE55674.1| alkylated DNA repair protein AlkB [Providencia rettgeri DSM 1131]
Length = 214
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ + LHQDKDE+ D P+VSFS+G F +G A V
Sbjct: 114 PDACLINRYAVGAAMSLHQDKDEA----DFTHPIVSFSLGLPTIFDFGGATRDAPKIAVY 169
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LE GDVL++GG+SR +HGV +I P LL R NLTFR+
Sbjct: 170 LEHGDVLVWGGRSRLNYHGVRRIKSGVHP--LLGPY-----RYNLTFRR 211
>gi|399020663|ref|ZP_10722790.1| alkylated DNA repair protein [Herbaspirillum sp. CF444]
gi|398094430|gb|EJL84793.1| alkylated DNA repair protein [Herbaspirillum sp. CF444]
Length = 215
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++ LHQDK+E D P+VS S+G A FL+G ++
Sbjct: 116 PDACLINRYVPGARMSLHQDKNEG----DMAQPIVSVSLGLPAAFLFGGSERADKPVRMR 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LESGDV+++GG +R FHGV DT + + E T + R NLTFR+
Sbjct: 172 LESGDVVVWGGLARLRFHGV-----DTLAEGVHELTG--KCRYNLTFRR 213
>gi|329298027|ref|ZP_08255363.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Plautia stali
symbiont]
Length = 213
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
G + D QY + G P +P F L + Q EA
Sbjct: 67 FGWSTDSRGYQYTEQDVSSGRKWPPMPALFRTLAQQTAQ----------------EAGFA 110
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G +
Sbjct: 111 GFNPDACLINRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPALFQFGGFERGDATQ 166
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V+LE GD++++GG SR +HG+ + P++ R NLTFR+
Sbjct: 167 RVLLEHGDIVVWGGPSRLRYHGILPLKAGIHPQA-------GAFRYNLTFRR 211
>gi|398995747|ref|ZP_10698619.1| alkylated DNA repair protein [Pseudomonas sp. GM21]
gi|398128908|gb|EJM18287.1| alkylated DNA repair protein [Pseudomonas sp. GM21]
Length = 221
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P G P +P F +L A + EA
Sbjct: 72 CGDLGWTTDRSGYKYTRNDPQTGQPWPAMPEVFFELAQAAAR----------------EA 115
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y ++ LHQD+DE + P+VS S+G A FL+G
Sbjct: 116 GFPDFVPDSCLINRYVPGARMSLHQDRDEGSYAA----PIVSVSLGLPATFLFGGFERSD 171
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++V L GD++I+GG R +HGV I P+ + R+N TFR
Sbjct: 172 KSRRVPLLHGDIVIWGGVDRLRYHGVLPIKDGHHPR-------LGEQRINFTFR 218
>gi|28870291|ref|NP_792910.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28853538|gb|AAO56605.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 228
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE D PVVS S+G A F +G ++ +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKDEH----DHRWPVVSVSLGIPAIFQFGGMQRSDKTRRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ I A LL E R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPI--KQAEHPLLGEQ-----RINLTFRK 223
>gi|2055386|gb|AAC45302.1| AlkB [Caulobacter crescentus CB15]
Length = 192
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y+ ++GLHQD+DE+ D P++S S+GD+A F G +
Sbjct: 86 PETPPDSCLVNLYATGARMGLHQDRDEA----DPRFPLLSISLGDTAVFRIGGVNRKDPT 141
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ + L SGDV G +R FHGV++I P ++ SL+ GR+NLT R+
Sbjct: 142 RSLRLASGDVCRLLGPARLAFHGVDRILPGSS--SLVPGG----GRINLTLRR 188
>gi|114762073|ref|ZP_01441541.1| alkylated DNA repair protein, putative [Pelagibaca bermudensis
HTCC2601]
gi|114545097|gb|EAU48100.1| alkylated DNA repair protein, putative [Roseovarius sp. HTCC2601]
Length = 201
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ C+ N+Y ++GLHQDKDE+ D PVVS S+GD F G+ + V
Sbjct: 101 PECCLINWYGEGARMGLHQDKDEA----DFACPVVSVSLGDDGLFRMGNTERGGKTESVW 156
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L SG V++ GG++R HGV++I +LL + GR+NLT R
Sbjct: 157 LGSGAVVVMGGEARLRHHGVDRI--RFGSSTLLPQG----GRINLTLR 198
>gi|332162949|ref|YP_004299526.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386309898|ref|YP_006005954.1| alkylated DNA repair protein AlkB [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418241446|ref|ZP_12867974.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433551014|ref|ZP_20507057.1| Alkylated DNA repair protein AlkB [Yersinia enterocolitica IP
10393]
gi|318604228|emb|CBY25726.1| alkylated DNA repair protein AlkB [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667179|gb|ADZ43823.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862301|emb|CBX72462.1| alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
enterocolitica W22703]
gi|351779119|gb|EHB21240.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431788113|emb|CCO70097.1| Alkylated DNA repair protein AlkB [Yersinia enterocolitica IP
10393]
Length = 221
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y KL LHQDKDE +D P+VS S+G F +G A ++
Sbjct: 115 FQPDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPGVFQFGGASREAKCQR 170
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V+L GDV+++GG SR +HGV I +P + R+NLTFR+
Sbjct: 171 VLLSEGDVVVWGGPSRLNYHGVLPIKAGFSPAA-------GAYRINLTFRR 214
>gi|453329289|dbj|GAC88481.1| alkylated DNA repair protein AlkB [Gluconobacter thailandicus NBRC
3255]
Length = 218
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 446 LVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESID 505
L GK + AL ++ EA P SP C+ N Y K+GLHQD+DE D
Sbjct: 83 LTGKPWPEMPALFLDLAR-EAAAEAGYPDFSPASCLINRYEPGAKMGLHQDRDED----D 137
Query: 506 KCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAP 565
P+VS S+G A F +G L ++ L GDV+++GG SR +HGV + P
Sbjct: 138 LASPIVSVSLGVPARFAFGGLLKTDPVQRYDLLHGDVVVWGGVSRLAWHGVSPVRETFHP 197
Query: 566 KSLLEETSMRRGRLNLTFR 584
++ +M R NLTFR
Sbjct: 198 QT----GAM---RYNLTFR 209
>gi|422657902|ref|ZP_16720340.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331016516|gb|EGH96572.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 233
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE D PVVS S+G A F +G ++ +++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKDEH----DHRWPVVSVSLGIPAIFQFGGMQRSDKTRRIS 186
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ I A LL E R+NLTFR+
Sbjct: 187 LFHGDVVVWGGEDRLRFHGILPI--KQAEHPLLGEQ-----RINLTFRK 228
>gi|39934792|ref|NP_947068.1| alkylated DNA repair protein [Rhodopseudomonas palustris CGA009]
gi|39648642|emb|CAE27163.1| alkylated DNA repair protein [Rhodopseudomonas palustris CGA009]
Length = 216
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE+ D P+VS S+G A F +G + ++
Sbjct: 117 PDACLINRYVPGAKMALHQDKDEA----DFSAPIVSVSLGLPAIFQFGGMARSDKPRRYE 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG SR ++HGV + E + R R+NLTFR+
Sbjct: 173 LRHGDVLVWGGPSRLVYHGVLTLKDG-------EHPLLGRQRINLTFRK 214
>gi|253999981|ref|YP_003052044.1| 2OG-Fe(II) oxygenase [Methylovorus glucosetrophus SIP3-4]
gi|253986660|gb|ACT51517.1| 2OG-Fe(II) oxygenase [Methylovorus glucosetrophus SIP3-4]
Length = 212
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQDK+E +D P+VS S+G SA F G ++ ++
Sbjct: 113 PDACLINRYAPGTRMSLHQDKNE----VDYSAPIVSVSLGVSAVFQLGGMQRSDKTSRIS 168
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDVL++G + R FHGV I P P + R+NLTFR+
Sbjct: 169 LQHGDVLVWGDEDRLRFHGVLPIKPQQHPLT-------GEDRINLTFRK 210
>gi|358448396|ref|ZP_09158900.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Marinobacter
manganoxydans MnI7-9]
gi|357227493|gb|EHJ05954.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Marinobacter
manganoxydans MnI7-9]
Length = 216
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + M C G W D +Y P G P +P F +L A +
Sbjct: 57 GHAMSAAMSCCGDLGWVTDSRGYRYQAEDPESGRPWPAMPAAFRELARSAAE-------- 108
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+ G + E PD C+ N Y ++GLHQDKDE D P+VS S+G
Sbjct: 109 -TAGFEGFE-------PDACLINRYQPGARMGLHQDKDEQ----DFTQPIVSVSLGLPMV 156
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F +G L+ +V L GDV+++GG +R +HGV + P + R N
Sbjct: 157 FQFGGLKRSERPIRVPLAHGDVVVWGGPARMCYHGVLTLKAGEHPLT-------GGYRYN 209
Query: 581 LTFRQ 585
LTFR+
Sbjct: 210 LTFRR 214
>gi|299065821|emb|CBJ36999.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum CMR15]
Length = 218
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P G P +P F +L +D+ A EA
Sbjct: 71 ALGWTSDRRGYRYAERDPQTGQPWPPLPNCFLRLA----RDAAA------------EAGF 114
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 115 PGFTPDACLINRYVPGTRLSLHQDKDEQ----DYDAPIVSVSLGMPAVFLWGGHRRADKT 170
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV + A LL R+NLT R+
Sbjct: 171 QRVPLFHGDVVVWGGPDRLRYHGVLPL--KEAWHPLLGAQ-----RINLTLRR 216
>gi|134094712|ref|YP_001099787.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions, repair of alkylated DNA [Herminiimonas
arsenicoxydans]
gi|133738615|emb|CAL61660.1| Alkylated DNA repair protein AlkB [Herminiimonas arsenicoxydans]
Length = 216
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y + P G P +P F L +A G D +
Sbjct: 67 CGKYGWVSDRAGYRYDAADPDSGKRWPPMPALFSTLASEAAA---------LAGFSDFK- 116
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y ++ LHQD+DE D P+VS S+G A FL+G +R
Sbjct: 117 ------PDACLINRYDPGARMSLHQDRDER----DFSQPIVSVSLGIPAVFLFGGMRRED 166
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A ++ L GDV+++GG R +HGV P + S+ R+NLT R+
Sbjct: 167 KAMRISLTHGDVVVWGGADRLRYHGV-------LPLKMASHPSLGEHRINLTLRK 214
>gi|387893927|ref|YP_006324224.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens A506]
gi|387160330|gb|AFJ55529.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens A506]
Length = 221
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
IEA PD C+ N Y K+ LHQDK+E S PVVS S+G A FL+G
Sbjct: 113 IEAGFSGFLPDACLINRYVPGAKMSLHQDKNERNYSA----PVVSVSLGLPAIFLFGGHA 168
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
N +KV L GDV+++GG R FHGV I K L M R+NLTFR
Sbjct: 169 RSDNTQKVSLFHGDVVVWGGVDRLRFHGVMPI------KDGLHSI-MGPQRINLTFR 218
>gi|422652732|ref|ZP_16715511.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330965794|gb|EGH66054.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G ++ +++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKNEH----DHRWPVVSVSLGIPAVFQFGGMQRSDKTRRIS 186
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ +I A LL E R+NLTFR+
Sbjct: 187 LFHGDVVVWGGEDRLRFHGILQI--KQAEHPLLGEQ-----RINLTFRK 228
>gi|424923432|ref|ZP_18346793.1| Alkylated DNA repair protein [Pseudomonas fluorescens R124]
gi|404304592|gb|EJZ58554.1| Alkylated DNA repair protein [Pseudomonas fluorescens R124]
Length = 221
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P G P +P +L A Q + G D A
Sbjct: 74 ALGWITDRSGYRYSARDPLTGNPWPAMPEVLSELAQTAAQRA---------GFADFHA-- 122
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
D C+ N Y K+ LHQDKDE+ + P+VS S+G A FL+G +
Sbjct: 123 -----DSCLINQYVPGAKMSLHQDKDENAYAA----PIVSLSLGLPAMFLFGGFARSDKS 173
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ L GD++I+GG R FHGV I P P+ + R+NLTFR
Sbjct: 174 QRIPLLHGDMVIWGGVDRLRFHGVLPIKPGQHPR-------LGERRINLTFR 218
>gi|357975693|ref|ZP_09139664.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Sphingomonas sp.
KC8]
Length = 225
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D+ P+VS S+G A FL+G ++V
Sbjct: 126 PDACLINRYEPGARLSLHQDRDER----DQSAPIVSVSLGLPATFLWGGPERRDRPRRVR 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R FHG++ + T P + R NLTFR+
Sbjct: 182 LAHGDVVVWGGPARFAFHGIDPVADGTHPLT-------GAARYNLTFRK 223
>gi|121593077|ref|YP_984973.1| DNA-N1-methyladenine dioxygenase [Acidovorax sp. JS42]
gi|120605157|gb|ABM40897.1| DNA-N1-methyladenine dioxygenase [Acidovorax sp. JS42]
Length = 220
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ +L LHQD+DE D P+VS S+G A FL+G A +V
Sbjct: 121 PDACLINRYAPGTRLSLHQDRDEQ----DLAAPIVSISLGLPATFLWGGATRGERALRVP 176
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GD +++GG R FHGV + P P + R+NLT R+
Sbjct: 177 LRHGDAVVWGGVDRLRFHGVLPVAPGQHPAT-------GECRINLTLRK 218
>gi|222109847|ref|YP_002552111.1| 2og-fe(ii) oxygenase [Acidovorax ebreus TPSY]
gi|221729291|gb|ACM32111.1| 2OG-Fe(II) oxygenase [Acidovorax ebreus TPSY]
Length = 220
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ +L LHQD+DE D P+VS S+G A FL+G A +V
Sbjct: 121 PDACLINRYAPGTRLSLHQDRDEQ----DLAAPIVSISLGLPATFLWGGATRGERALRVP 176
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GD +++GG R FHGV + P P + R+NLT R+
Sbjct: 177 LRHGDTVVWGGVDRLRFHGVLPVAPGQHPAT-------GECRINLTLRK 218
>gi|330993193|ref|ZP_08317130.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
sp. SXCC-1]
gi|329759744|gb|EGG76251.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
sp. SXCC-1]
Length = 218
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD+C+ N Y ++GLHQD+ E ++ PVVS S G A F +G L+ +++
Sbjct: 120 PDVCLINGYRPGARMGLHQDRGERLDA-----PVVSLSFGLPAIFQWGGLQRGDPLRRIP 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKI----FPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +FHG+ + P T P R NLTFR+
Sbjct: 175 LLHGDVVVWGGPSRLVFHGIAPLRAGQHPVTGPC-----------RYNLTFRR 216
>gi|398799262|ref|ZP_10558554.1| alkylated DNA repair protein [Pantoea sp. GM01]
gi|398099130|gb|EJL89402.1| alkylated DNA repair protein [Pantoea sp. GM01]
Length = 213
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA +PD C+ N Y KL LHQDKDE D P+VS S+G A F +G
Sbjct: 106 EAGFSGYNPDACLINRYEPGAKLTLHQDKDEK----DLRQPIVSVSLGLPAVFQFGGFER 161
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V+LE GD++++GG SR +HG+ + P++ R NLTFR+
Sbjct: 162 GDATQRVLLEHGDIVVWGGPSRLRYHGILPLKAGIHPQA-------GAFRYNLTFRR 211
>gi|152980529|ref|YP_001353534.1| alkylated DNA repair protein [Janthinobacterium sp. Marseille]
gi|151280606|gb|ABR89016.1| alkylated DNA repair protein [Janthinobacterium sp. Marseille]
Length = 259
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 39/196 (19%)
Query: 393 PGGFYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGK 449
PGGF + + M G+ W D +Y T P G P +P F +L +
Sbjct: 98 PGGF---------RMSVAMTSCGQYGWVTDRSGYRYDTVDPDSGKPWPQMPEVFFRLAQE 148
Query: 450 AIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLP 509
A ++ G D P+ C+ N Y ++ LHQDKDE D P
Sbjct: 149 A---------ALAAGFADF-------VPNACLINCYEPGARMSLHQDKDEQ----DFRQP 188
Query: 510 VVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLL 569
+VS S+G A F +G R A ++ L+ GDV+++GG +R +HGV + P T P
Sbjct: 189 IVSVSLGIPAVFQFGGDRREDKAMRIPLQHGDVVVWGGTARLRYHGVLALKPATHPL--- 245
Query: 570 EETSMRRGRLNLTFRQ 585
R+NLTFR+
Sbjct: 246 ----FGARRINLTFRK 257
>gi|340029601|ref|ZP_08665664.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Paracoccus sp. TRP]
Length = 210
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
EA P PD C+ N Y K+GLHQD+DE+ D P+VS S+G A F +G
Sbjct: 103 EAGFPDFHPDACLINRYVPGIKMGLHQDRDEA----DLTAPIVSVSLGLPAIFQFGGPER 158
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG +R +HG+ + P + P + R+NLTFR+
Sbjct: 159 RDPVARHTLHHGDVVVWGGVARLNWHGILTLRPGSHPLT-------GAARINLTFRR 208
>gi|297197713|ref|ZP_06915110.1| alkylated DNA repair protein [Streptomyces sviceus ATCC 29083]
gi|297146837|gb|EFH28370.1| alkylated DNA repair protein [Streptomyces sviceus ATCC 29083]
Length = 99
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKVILES 539
+ NFY ++G+H+D DE ++ PVVS S+GD+ F +G+ V L S
Sbjct: 1 MINFYDQDARMGMHRDSDEKSDA-----PVVSLSLGDTCVFRFGNPETRTKPYTDVELRS 55
Query: 540 GDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
GD+ +FGG SR +HGV ++ P TAP L GRLN+T R
Sbjct: 56 GDLFVFGGPSRLAYHGVPRVHPGTAPPEL-----GLTGRLNITLR 95
>gi|385330769|ref|YP_005884720.1| alkylated DNA repair protein AlkB [Marinobacter adhaerens HP15]
gi|311693919|gb|ADP96792.1| alkylated DNA repair protein AlkB [Marinobacter adhaerens HP15]
Length = 216
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 404 GANLYLKMMCLGK-NW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEK 460
G + M C G W D +Y P G P +P F +L A +
Sbjct: 57 GHAMSAAMSCCGDLGWVTDRRGYRYQAEDPESGRPWPAMPAAFRELARSAAE-------- 108
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
+ G + E PD C+ N Y K+GLHQDKDE D P+VS S+G
Sbjct: 109 -TAGFEGFE-------PDACLINRYQPGAKMGLHQDKDEQ----DFTQPIVSVSLGLPMV 156
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLN 580
F +G L+ +V L GDV+++GG +R +HGV + P + R N
Sbjct: 157 FQFGGLKRSERPIRVPLAHGDVVVWGGPARMRYHGVLTLKAGEHPLT-------GGYRYN 209
Query: 581 LTFRQ 585
LTFR+
Sbjct: 210 LTFRR 214
>gi|409046426|gb|EKM55906.1| hypothetical protein PHACADRAFT_174062 [Phanerochaete carnosa
HHB-10118-sp]
Length = 478
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 458 IEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGD 517
IE+ T R+D E PD I NFY + L H D+ E + P+VS S+G
Sbjct: 331 IEEWRTWREDYE-------PDAGIVNFYQTSDTLMAHVDRSE----LCAASPLVSISLGC 379
Query: 518 SAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLL----EETS 573
+A FL G + L SGDVLI G RR +HGV +I DT P LL +T+
Sbjct: 380 TAVFLIGGPTRDTEPVPIFLRSGDVLIMSGPCRRAYHGVPRILEDTCPAHLLGSFNSQTA 439
Query: 574 ---------------MRRGRLNLTFRQ 585
MR R+N+ RQ
Sbjct: 440 PSSDQGDDWKPYAEYMRSARINVNVRQ 466
>gi|338974202|ref|ZP_08629564.1| alkylated DNA repair protein AlkB [Bradyrhizobiaceae bacterium
SG-6C]
gi|338232929|gb|EGP08057.1| alkylated DNA repair protein AlkB [Bradyrhizobiaceae bacterium
SG-6C]
Length = 215
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 424 QYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIAN 483
+Y T+ P G P +P F L +A +A PD C+ N
Sbjct: 79 RYDTNDPDSGLPWPSMPETFADLALRAAD----------------KAGFADFRPDACLIN 122
Query: 484 FYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVL 543
Y KL LHQDKDE +D P+VS S+G A FL+G L + L GDV+
Sbjct: 123 RYEPGAKLSLHQDKDE----LDFNAPIVSVSLGLPATFLFGGLNRNDKTTRYRLAHGDVV 178
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++GG +R +HGV P + + + R+NLTFR+
Sbjct: 179 VWGGPARLTYHGV-------MPLADGDHPLLGSQRINLTFRK 213
>gi|374311273|ref|YP_005057703.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
gi|358753283|gb|AEU36673.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
Length = 217
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D + +Y + P G P +P F L +A A
Sbjct: 70 ALGWVTDSKGYRYASMDPETGGPWPAMPKVFMDLAQQAAT----------------LAGY 113
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y +L LHQDK+E+ D P+VS S+G A FL+G L
Sbjct: 114 PTFIPDACLINRYEPGARLTLHQDKNEN----DFAEPIVSVSLGLPAVFLFGGLERSDKT 169
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ + GDVL++GG +R +HG+ + + P + R NLTFR+
Sbjct: 170 IRLPIVHGDVLVWGGPARLCYHGINPLKKGSHPAT-------GGYRFNLTFRK 215
>gi|358639332|dbj|BAL26629.1| alkylated DNA repair protein AlkB [Azoarcus sp. KH32C]
Length = 216
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P +PD C+ N Y+ ++ LHQD+DE + P+VS S+G A FL G +
Sbjct: 112 FPGFAPDACLINRYAPGARMSLHQDRDER----NLAAPIVSVSLGLPAVFLLGGMSRRDP 167
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++++LE GD +++GG+ R +HGV+ + LL R+NLTFR
Sbjct: 168 QRRILLEHGDAIVWGGEDRLRYHGVQPV--KDGRHGLLGAL-----RINLTFR 213
>gi|330823359|ref|YP_004386662.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans K601]
gi|329308731|gb|AEB83146.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans K601]
Length = 217
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y ++ LHQD+DE D P+VS S+G A FL+G A +
Sbjct: 116 FAPDACLVNRYEPGARMSLHQDRDER----DLGAPIVSVSLGLPAVFLWGGATRGERALR 171
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L GDV+++GG R FHGV + P E + R+NLT R+
Sbjct: 172 VPLRHGDVVVWGGVDRLRFHGVLPVAPG-------EHPATGSFRINLTLRK 215
>gi|423691716|ref|ZP_17666236.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens SS101]
gi|388000492|gb|EIK61821.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens SS101]
Length = 221
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 70/171 (40%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P P++P QL A EA
Sbjct: 75 LGWTTDARGYRYSPLDPRSQQPWPVMPATLRQLAVAAA----------------TEAGFS 118
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ LHQDK+E S PVVS S+G A FL+G +
Sbjct: 119 GFQPDACLINRYVPGAKMSLHQDKNERSYSA----PVVSVSLGLPAVFLFGGHSRSDKTQ 174
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
KV L GDV+++GG R FHGV I P M R+NLTFR
Sbjct: 175 KVSLFHGDVVVWGGVDRLRFHGVMPIKDGVHP-------VMGPQRINLTFR 218
>gi|83748960|ref|ZP_00945969.1| AlkB [Ralstonia solanacearum UW551]
gi|207744187|ref|YP_002260579.1| alkylated dna repair protein [Ralstonia solanacearum IPO1609]
gi|83724383|gb|EAP71552.1| AlkB [Ralstonia solanacearum UW551]
gi|206595592|emb|CAQ62519.1| alkylated dna repair protein [Ralstonia solanacearum IPO1609]
Length = 218
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQ----DYGAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV P E + R+NLT R+
Sbjct: 170 TQRVPLLHGDVVVWGGPDRLRYHGV-------LPLKEAEHPLLGAQRINLTLRR 216
>gi|333928127|ref|YP_004501706.1| 2OG-Fe(II) oxygenase [Serratia sp. AS12]
gi|333933080|ref|YP_004506658.1| 2OG-Fe(II) oxygenase [Serratia plymuthica AS9]
gi|386329951|ref|YP_006026121.1| 2OG-Fe(II) oxygenase [Serratia sp. AS13]
gi|333474687|gb|AEF46397.1| 2OG-Fe(II) oxygenase [Serratia plymuthica AS9]
gi|333492187|gb|AEF51349.1| 2OG-Fe(II) oxygenase [Serratia sp. AS12]
gi|333962284|gb|AEG29057.1| 2OG-Fe(II) oxygenase [Serratia sp. AS13]
Length = 215
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 404 GANLYLKMMCLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKI 461
G + + M G W D +Y G P IP F L +A Q
Sbjct: 57 GHVMSVAMSWCGNGWSSDSRGYRYSERDSRSGKRWPPIPAIFMALADEAAQ--------- 107
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+A PD C+ N Y KL LHQDKDE D P+VS S+G A F
Sbjct: 108 -------QAGFAPFVPDSCLMNRYDPGSKLSLHQDKDEH----DFGSPIVSVSLGLPAVF 156
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
+G ++ A+++ L GDV+++GG SR FHG+ I
Sbjct: 157 QFGGMQRSDRAQRIPLAHGDVVVWGGPSRLCFHGIMPI 194
>gi|421895707|ref|ZP_16326107.1| alkylated dna repair protein [Ralstonia solanacearum MolK2]
gi|206586872|emb|CAQ17457.1| alkylated dna repair protein [Ralstonia solanacearum MolK2]
Length = 218
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQ----DYGAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV P E + R+NLT R+
Sbjct: 170 TQRVPLLHGDVVVWGGPDRLRYHGV-------LPLKEAEHPLLGAQRINLTLRR 216
>gi|119386500|ref|YP_917555.1| 2OG-Fe(II) oxygenase [Paracoccus denitrificans PD1222]
gi|119377095|gb|ABL71859.1| DNA-N1-methyladenine dioxygenase [Paracoccus denitrificans PD1222]
Length = 218
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P G P +P F QL +A A
Sbjct: 69 CGALGWVSDRRGYRYEPCDPLTGRPWPAMPARFLQLADEAAA----------------RA 112
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y K+GLHQD+DE+ D P+VS S+G A F +G
Sbjct: 113 GFPGFRPDACLVNRYVPGVKMGLHQDRDEA--GFDA--PIVSVSLGLPATFQFGGPERSD 168
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
K +L+ GDV+++GG +R +HG+ + E R+NLTFR+
Sbjct: 169 PVAKHVLDHGDVVVWGGPARLAWHGILTL-------RRAEHPLTGAARINLTFRR 216
>gi|383191518|ref|YP_005201646.1| alkylated DNA repair protein [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589776|gb|AEX53506.1| alkylated DNA repair protein [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 217
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 456 ALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSI 515
AL +++ + EA +PD C+ N Y K+ LHQDKDE D P+VS S+
Sbjct: 98 ALFRRLAVSAAE-EAGFAGFAPDACLINRYQPGAKMSLHQDKDEH----DFGQPIVSVSL 152
Query: 516 GDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMR 575
G A F +G + ++V L GD++++GG SR +HGV P E
Sbjct: 153 GLPAVFQFGGMERSDKTQRVPLMHGDIVVWGGPSRLRYHGV-------LPLKAGEHPLTG 205
Query: 576 RGRLNLTFRQ 585
R NLTFR+
Sbjct: 206 SYRFNLTFRK 215
>gi|375290021|ref|YP_005124561.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
241]
gi|376244855|ref|YP_005135094.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC01]
gi|371579692|gb|AEX43359.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
241]
gi|372107485|gb|AEX73546.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC01]
Length = 232
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIV----KICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V +I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVCEIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
Y + R D +P L A + RA E +E P+
Sbjct: 73 -----HYPSYRYIDKIAGTTVPPVPDGLAALAPEALRAAAEVAEELAPWVET----FVPE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y ++G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSRMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATFP----DGCGLEQGRINITIRQ 222
>gi|452130389|ref|ZP_21942961.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
H558]
gi|451920314|gb|EMD70460.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
H558]
Length = 216
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
D C+ N Y+ ++ LHQD++E D P+VS S+G A FL+G LR + +++L
Sbjct: 114 DACLINHYTPGARMSLHQDRNEQ----DFAAPIVSVSLGLPAIFLFGGLRRDDRSARIVL 169
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ GDV ++GG R FHGV + P + R R+NLT R
Sbjct: 170 QHGDVAVWGGVDRLRFHGVLPLADGRHPM-------VGRQRINLTLRH 210
>gi|270262645|ref|ZP_06190916.1| 2OG-Fe(II) oxygenase [Serratia odorifera 4Rx13]
gi|386824483|ref|ZP_10111617.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia plymuthica
PRI-2C]
gi|421784419|ref|ZP_16220859.1| alkylated DNA repair protein AlkB [Serratia plymuthica A30]
gi|270043329|gb|EFA16422.1| 2OG-Fe(II) oxygenase [Serratia odorifera 4Rx13]
gi|386378583|gb|EIJ19386.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia plymuthica
PRI-2C]
gi|407753431|gb|EKF63574.1| alkylated DNA repair protein AlkB [Serratia plymuthica A30]
Length = 215
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 404 GANLYLKMMCLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKI 461
G + + M G W D +Y G P IP F L +A Q
Sbjct: 57 GHVMSVAMSWCGNGWSSDSRGYRYSERDSRSGKRWPPIPAIFMALADEAAQ--------- 107
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+A PD C+ N Y KL LHQDKDE D P+VS S+G A F
Sbjct: 108 -------QAGFAPFVPDSCLINRYDPGSKLSLHQDKDEH----DFGSPIVSVSLGLPAVF 156
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
+G ++ A+++ L GDV+++GG SR FHG+ I
Sbjct: 157 QFGGMQRSDRAQRIPLAHGDVVVWGGPSRLCFHGIMPI 194
>gi|398861760|ref|ZP_10617376.1| alkylated DNA repair protein [Pseudomonas sp. GM79]
gi|398231965|gb|EJN17945.1| alkylated DNA repair protein [Pseudomonas sp. GM79]
Length = 226
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P G P +P F +L A + EA
Sbjct: 77 CGTWGWTTDRSGYQYTRNDPQTGDPWPEMPEVFFELAQAAAR----------------EA 120
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y ++ LHQDK+E + P+VS S+G A FL+G A
Sbjct: 121 GFMDFVPDSCLINRYIPGARMSLHQDKNEDSYAA----PIVSVSLGLPATFLFGGFERSA 176
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
N+++V L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 177 NSQRVPLLHGDIVVWGGVDRLRYHGVLPIKQGYHPQ-------LGEQRINFTFR 223
>gi|387127994|ref|YP_006296599.1| alkylated DNA repair protein AlkB [Methylophaga sp. JAM1]
gi|386275056|gb|AFI84954.1| Alkylated DNA repair protein AlkB [Methylophaga sp. JAM1]
Length = 223
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 80/195 (41%), Gaps = 37/195 (18%)
Query: 393 PGGFYQPGYRDGANLYLKMMCLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKA 450
PGGFY C W D +Y P P +P F +L A
Sbjct: 62 PGGFYMSAAITN--------CGDVGWHTDRHGYRYTAIDPLTNLAWPEMPQCFRELAETA 113
Query: 451 IQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPV 510
Q G D +PD+C+ N Y K+GLHQDKDE D P+
Sbjct: 114 AQ---------RCGFSDF-------NPDVCLMNQYEVGAKMGLHQDKDEK----DFSQPI 153
Query: 511 VSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE 570
VS S+G F +G +++ LE GDV+++G +RR +HGV + P P +
Sbjct: 154 VSVSLGLPIIFQFGGASRNDPKQRIPLEHGDVIVWGRAARRYYHGVLTLKPGQHPLT--- 210
Query: 571 ETSMRRGRLNLTFRQ 585
R NLTFR+
Sbjct: 211 ----GPYRYNLTFRK 221
>gi|213970412|ref|ZP_03398541.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato T1]
gi|213924883|gb|EEB58449.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato T1]
Length = 228
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G ++ +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKNEH----DHRWPVVSVSLGIPAIFQFGGMQRSDKTRRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ I A LL E R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPI--KQAEHPLLGEQ-----RINLTFRK 223
>gi|301381195|ref|ZP_07229613.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. tomato Max13]
gi|302058538|ref|ZP_07250079.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. tomato K40]
gi|302132608|ref|ZP_07258598.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 233
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G ++ +++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKNEH----DHRWPVVSVSLGIPAIFQFGGMQRSDKTRRIS 186
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ I A LL E R+NLTFR+
Sbjct: 187 LFHGDVVVWGGEDRLRFHGILPI--KQAEHPLLGEQ-----RINLTFRK 228
>gi|91978060|ref|YP_570719.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris BisB5]
gi|91684516|gb|ABE40818.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQD+DE D P+VS S+G A F +G + ++
Sbjct: 118 PDACLINRYAPGARMALHQDRDEQ----DFSAPIVSVSLGLPAIFQFGGMARSDKPRRFE 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDVL++GG+SR ++HGV + + + R R+NLTFR+
Sbjct: 174 LRHGDVLVWGGESRLVYHGVLALKDG-------DHQLLGRQRINLTFRK 215
>gi|351728460|ref|ZP_08946151.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax radicis
N35]
Length = 217
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
D C+ N Y+ +L LHQD+DE + P+VS S+G A FL+G + A+++ L
Sbjct: 119 DACLVNRYAPGTRLSLHQDRDEG----NYAHPIVSVSLGIPAVFLWGGAQRADKARRIAL 174
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
GDV+++GG +R FHGV + P+ + T R+NLTFR+
Sbjct: 175 VHGDVVVWGGPARLRFHGVLPL-----PEGVHPLTGAH--RINLTFRK 215
>gi|421890885|ref|ZP_16321725.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum K60-1]
gi|378963752|emb|CCF98473.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum K60-1]
Length = 218
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQ----DYDAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV P E + R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGV-------LPLKEAEHPLLGAQRINLTLRR 216
>gi|398980214|ref|ZP_10688882.1| hypothetical protein PMI24_05071 [Pseudomonas sp. GM25]
gi|398134753|gb|EJM23890.1| hypothetical protein PMI24_05071 [Pseudomonas sp. GM25]
Length = 459
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE+ P+VS S+G A FL+G ++K+
Sbjct: 360 PDSCLINRYVPGAKMSLHQDKDENAYEA----PIVSLSLGLPATFLFGGFARGDRSQKIS 415
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HG+ I P P+ + R NLTFR
Sbjct: 416 LLHGDMVVWGGVDRLRYHGILPIKPGRHPR-------LGEQRFNLTFR 456
>gi|300703170|ref|YP_003744772.1| alpha-ketoglutarate-dependent dioxygenase alkb [Ralstonia
solanacearum CFBP2957]
gi|299070833|emb|CBJ42133.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum CFBP2957]
Length = 218
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQ----DYDAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV P E + R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGV-------LPLKEAEHPLLGAQRINLTLRR 216
>gi|78066391|ref|YP_369160.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
gi|77967136|gb|ABB08516.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
Length = 216
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N + +L LHQDKDE D P+VS S+G +A FL+G +
Sbjct: 112 FPDFEPDACLINRHLPGARLSLHQDKDER----DLNAPIVSVSLGMTAIFLFGGHARGDS 167
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A++V+L GDV+++GG R +HG+ + P LL R+NLTFR+
Sbjct: 168 AERVLLRHGDVVVWGGVDRMRYHGILPL--KDVPHPLLGSQ-----RINLTFRK 214
>gi|427799231|ref|ZP_18967226.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|414064604|gb|EKT45510.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
Length = 188
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR
Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLR 160
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFH 554
++++LE GD++++GG+SR +F+
Sbjct: 161 RSDPIQRILLEHGDIVVWGGESRLVFY 187
>gi|422672199|ref|ZP_16731563.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aceris str. M302273]
gi|330969937|gb|EGH70003.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aceris str. M302273]
Length = 228
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD+DE D PVVS S+G A F +G L +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRDE----YDHRWPVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|422298898|ref|ZP_16386479.1| DNA alkylation damage repair protein AlkB [Pseudomonas avellanae
BPIC 631]
gi|407989334|gb|EKG31677.1| DNA alkylation damage repair protein AlkB [Pseudomonas avellanae
BPIC 631]
Length = 233
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G ++ +++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKNE----YDHRWPVVSVSLGIPAVFQFGGMQRSDKTRRIS 186
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GDV+++GG+ R FHG+ I A LL E R+NLTFR
Sbjct: 187 LFHGDVVVWGGEDRLRFHGILPI--KQADHPLLGEQ-----RINLTFR 227
>gi|386332552|ref|YP_006028721.1| alpha-ketoglutarate-dependent dioxygenase alkb [Ralstonia
solanacearum Po82]
gi|334195000|gb|AEG68185.1| alpha-ketoglutarate-dependent dioxygenase alkb [Ralstonia
solanacearum Po82]
Length = 218
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQ----DYDAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV P E + R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGV-------LPLKEAEHPLLGAQRINLTLRR 216
>gi|421747748|ref|ZP_16185427.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
HPC(L)]
gi|409773600|gb|EKN55365.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
HPC(L)]
Length = 221
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y+ +L LHQD++E D P+VS S+G A FL+G +
Sbjct: 118 PGFAPDACLINRYTPGTRLSLHQDRNER----DLRAPIVSVSLGLPAVFLFGGAKRADRP 173
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GD+ ++GG SR +HG+ AP + + RLNLTFR+
Sbjct: 174 ARVRLAHGDIAVWGGPSRLFYHGI-------APLAEGDHPLTGALRLNLTFRK 219
>gi|440745816|ref|ZP_20925105.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP39023]
gi|440372079|gb|ELQ08893.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP39023]
Length = 228
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 73/172 (42%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y + P G P +P F L A + A
Sbjct: 79 LGWITDRHGYRYTATDPQTGQAWPAMPDAFMHLAQDAA----------------LAAGYA 122
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQD++E D PVVS S+G A F +G L +
Sbjct: 123 GFVPDACLINRYIPGARMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGLLRSDKTQ 178
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++ L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 179 RISLFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|410943893|ref|ZP_11375634.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconobacter
frateurii NBRC 101659]
Length = 266
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
D + +Y + P G P +P F +L A + EA P SP
Sbjct: 119 DQKGYRYVRTDPLTGKPWPKMPDMFFELACVAAK----------------EAGYPDFSPS 162
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILE 538
C+ N Y K+GLHQD+DE D P+VS S+G A F +G L ++ L
Sbjct: 163 SCLINRYEPGAKMGLHQDRDED----DLSSPIVSVSLGIPAHFAFGGLLRTDPVQRHDLF 218
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
GDV+++GG SR +HGV I P++ +M R NLTFR
Sbjct: 219 HGDVVVWGGISRLAWHGVSPIRETFHPQT----GAM---RYNLTFR 257
>gi|344924470|ref|ZP_08777931.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Candidatus
Odyssella thessalonicensis L13]
Length = 212
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D + +Y P G P IP+ F +L +A Q A
Sbjct: 66 LGWVSDAQGYRYAAFDPQTGVSWPSIPLSFLELAQQAAQ----------------AANFS 109
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y K+ +HQDKDES D P+VS S+G A F G +
Sbjct: 110 EFMPDSCLINCYQPGAKMTMHQDKDES----DLSAPIVSVSLGLPATFKMGGGQRTGPVH 165
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
KV+L GDV+++G ++R +HGV + P + R R+NLTFR+
Sbjct: 166 KVMLSHGDVMVWGNEARLAYHGVLPLKEGVHPL-------VGRRRINLTFRK 210
>gi|163797477|ref|ZP_02191428.1| 2OG-Fe(II) oxygenase superfamily protein [alpha proteobacterium
BAL199]
gi|159177226|gb|EDP61785.1| 2OG-Fe(II) oxygenase superfamily protein [alpha proteobacterium
BAL199]
Length = 217
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C G W D + +Y + P GA P +P F L A EA
Sbjct: 68 CGGGGWVTDRKGYRYTPTDPQTGAPWPAMPGVFLDLAEAAAA----------------EA 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P PD C+ N Y +L LHQDKDE D P+VS S+G A F +G +
Sbjct: 112 GFPGFVPDACLINRYEPGARLSLHQDKDER----DYAHPIVSVSLGLPATFQFGGRKRAD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ KV L GDV+++GG +R HGV + E + R R NLT R+
Sbjct: 168 SVSKVALSHGDVVVWGGPARLHHHGVLTLRDG-------EHPATGRTRFNLTLRR 215
>gi|376242000|ref|YP_005132852.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
CDCE 8392]
gi|376253464|ref|YP_005141923.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
PW8]
gi|372105242|gb|AEX71304.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
CDCE 8392]
gi|372116548|gb|AEX69018.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
PW8]
Length = 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V+ I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
+ +Y + VPP+ + A + + +++ + P+
Sbjct: 73 HYPSYRY-VDKIAGTTVPPV--------PDSLAALAPAALRAAAEVAEELAPWVETFVPE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y ++G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSRMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|422588782|ref|ZP_16663448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330875357|gb|EGH09506.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 233
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDK+E D PVVS S+G A F +G ++ +++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKNEH----DHRWPVVSVSLGIPAVFQFGGMQRSDKTRRIS 186
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG R FHG+ I A LL E R+NLTFR+
Sbjct: 187 LFHGDVVVWGGDDRLRFHGILPI--KQAEHPLLGEQ-----RINLTFRK 228
>gi|398852538|ref|ZP_10609193.1| alkylated DNA repair protein [Pseudomonas sp. GM80]
gi|398243996|gb|EJN29572.1| alkylated DNA repair protein [Pseudomonas sp. GM80]
Length = 221
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 73/172 (42%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y + P G+ P +P F +L A A
Sbjct: 74 ALGWITDRTGYRYSSVDPLSGSPWPALPPVFAELAHSAAT----------------RAGF 117
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
D C+ N Y K+ LHQDKDE + P+VS S+G A FL+G +
Sbjct: 118 AGFDADSCLINRYVPGAKMSLHQDKDEKAYAA----PIVSLSLGLPAMFLFGGFNRSDKS 173
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++ L GD+LI+GG R FHGV I P+ + R+NLTFR
Sbjct: 174 QRIALLHGDMLIWGGVDRLRFHGVLPIKQGRHPR-------LGEQRINLTFR 218
>gi|88812263|ref|ZP_01127514.1| 2OG-Fe(II) oxygenase [Nitrococcus mobilis Nb-231]
gi|88790514|gb|EAR21630.1| 2OG-Fe(II) oxygenase [Nitrococcus mobilis Nb-231]
Length = 216
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G ++ ++
Sbjct: 115 FAPDACLINRYRPGARLTLHQDRDER----DFKAPIVSVSLGLPAVFLFGGVQRRDRPRR 170
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ +ESGDV ++GG +R +HG+ + P + R R+NLT R+
Sbjct: 171 IRMESGDVAVWGGPARLAYHGIAPLVDGNHPLT-------GRCRINLTLRK 214
>gi|293607290|ref|ZP_06689631.1| alkylated DNA repair protein AlkB [Achromobacter piechaudii ATCC
43553]
gi|292814382|gb|EFF73522.1| alkylated DNA repair protein AlkB [Achromobacter piechaudii ATCC
43553]
Length = 217
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + Y +R P G P +P F +L A Q EA
Sbjct: 68 CGEWGWTTDAHGYRYARIDPLTGQPWPDLPAAFERLAQAAAQ----------------EA 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y +L LHQDK+E D P+VS S+G A FL+G
Sbjct: 112 GFAGFTPDACLVNRYEPGARLSLHQDKNER----DFDAPIVSVSLGMPALFLFGGDDRAD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A +V L GDV+++GG R +HGV + AP L R+N T R+
Sbjct: 168 KAARVPLFHGDVVVWGGVDRLRYHGVLPV--KDAPHPRLGSQ-----RINFTLRK 215
>gi|66046216|ref|YP_236057.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. syringae B728a]
gi|63256923|gb|AAY38019.1| DNA-N1-methyladenine dioxygenase [Pseudomonas syringae pv. syringae
B728a]
Length = 228
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD+DE D PVVS S+G A F +G L +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRDE----YDHRWPVVSVSLGIPAIFQFGGLLRGDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|388469937|ref|ZP_10144146.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
synxantha BG33R]
gi|388006634|gb|EIK67900.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
synxantha BG33R]
Length = 221
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P + P +P QL A+ G +D
Sbjct: 74 ALGWTTDTRGYRYSPLDPRNQQPWPAMPDALRQL---------AMAAATEAGFRDF---- 120
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
PD C+ N Y K+ LHQDK+E S PVVS S+G A FL+G
Sbjct: 121 ---LPDACLINRYVPGAKMSLHQDKNERSYSA----PVVSVSLGLPAIFLFGGHERSDKT 173
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+KV L GDV+++GG R FHGV P E M R+NLTFR
Sbjct: 174 QKVSLFHGDVVVWGGVDRLRFHGV-------MPIKAGEHPVMGAQRINLTFR 218
>gi|241766555|ref|ZP_04764415.1| DNA-N1-methyladenine dioxygenase [Acidovorax delafieldii 2AN]
gi|241363209|gb|EER58787.1| DNA-N1-methyladenine dioxygenase [Acidovorax delafieldii 2AN]
Length = 181
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD C+ N Y+ +L LHQDKDE + P+VS S+G SA FL+G + A+++
Sbjct: 81 APDACLINRYAPGTRLSLHQDKDEGNYA----HPIVSVSLGVSALFLWGGAQRGDRARRI 136
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R FHGV + P+ A SL R+NLTFR+
Sbjct: 137 PLAHGDVVVWGGPARLRFHGVLPL-PE-ASHSLTGAL-----RINLTFRK 179
>gi|338532963|ref|YP_004666297.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Myxococcus fulvus
HW-1]
gi|337259059|gb|AEI65219.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Myxococcus fulvus
HW-1]
Length = 217
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D ++Y P G P +P F QL A +
Sbjct: 68 CGAWGWVTDRTGNRYDAVDPVQGRPWPDMPAVFLQLAQTAAA----------------KV 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y K+ LHQDKDE D P+VS S+G A FL+G
Sbjct: 112 GFAGFTPDACLVNRYEPGAKMSLHQDKDER----DFSAPIVSVSLGLPAIFLFGGAERSD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GDV+++GG R +HGV + P LL R+NLTFR+
Sbjct: 168 KPERVRLSHGDVVVWGGPDRLRYHGVMPLKAGHHP--LLGAH-----RINLTFRK 215
>gi|422008715|ref|ZP_16355699.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
rettgeri Dmel1]
gi|414095188|gb|EKT56851.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
rettgeri Dmel1]
Length = 147
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ + LHQDKDE+ D P+VSFS+G F +G + A +
Sbjct: 47 PDACLINRYAVGAAMALHQDKDET----DFTQPIVSFSLGLPTTFDFGGVTRDAPKVAIY 102
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+E GDVL++GG+SR +HGV ++ P LL R NLTFR
Sbjct: 103 IEHGDVLVWGGQSRLNYHGVRRVKSGVHP--LLGPY-----RYNLTFRH 144
>gi|405355777|ref|ZP_11024889.1| Alkylated DNA repair protein AlkB [Chondromyces apiculatus DSM 436]
gi|397091049|gb|EJJ21876.1| Alkylated DNA repair protein AlkB [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 217
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P P +P+ F QL A A
Sbjct: 68 CGAWGWVTDRTGYRYAEVDPVPERPWPTMPMAFLQLAQSAAA----------------RA 111
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y K+ LHQDKDE D P+VS S+G A FL+G
Sbjct: 112 GFADFVPDSCLVNRYDTGAKMSLHQDKDER----DFSAPIVSVSLGLPAVFLFGGEGRAD 167
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG +R +HGV + P P+ + R+NLTFR+
Sbjct: 168 KPLRVRLIHGDVVVWGGPARLRYHGVMPLKPGHHPQ-------LGAHRINLTFRK 215
>gi|17547287|ref|NP_520689.1| alkylated DNA repair protein [Ralstonia solanacearum GMI1000]
gi|17429589|emb|CAD16275.1| probable alkylated dna repair protein [Ralstonia solanacearum
GMI1000]
Length = 218
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G R
Sbjct: 114 FPGFTPDACLINRYVPGARLSLHQDKDEQ----DYGAPIVSVSLGMPAMFLWGGHRRTDK 169
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG R +HGV + A LL R+NLT R+
Sbjct: 170 TLRVPLFHGDVVVWGGPDRLRYHGVLPL--KEAAHPLLGAQ-----RINLTLRR 216
>gi|423013768|ref|ZP_17004489.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans AXX-A]
gi|338783262|gb|EGP47630.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans AXX-A]
Length = 219
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + Y +R P G P +P F L +A + A
Sbjct: 70 CGDYGWTSDERGYRYTRDDPRSGLPWPAMPEAFDTLAREAA----------------LAA 113
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+ P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G
Sbjct: 114 DFPGFAPDACLVNRYQPGSRLSLHQDKDER----DYSAPIVSVSLGMPAVFLFGGHERGD 169
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGV 556
A V L GDV+++GG R +HGV
Sbjct: 170 KAVHVPLFHGDVVVWGGVDRLRYHGV 195
>gi|374312614|ref|YP_005059044.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
gi|358754624|gb|AEU38014.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
Length = 217
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D + +Y P G + P +P F L +A +A
Sbjct: 70 ALGWVTDRKGYRYAPVDPEIGGLWPAMPKVFMDLAREAAT----------------KAGY 113
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P PD C+ N Y +L LHQDK+E+ D P+VS S+G A FL+G L
Sbjct: 114 PTFVPDACLINRYEPGARLTLHQDKNEN----DFEEPIVSVSLGLPAVFLFGGLERSDKT 169
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V + GDVL++GG +R +HGV + + P + R NLTFR+
Sbjct: 170 IRVPVLHGDVLVWGGPARLRYHGVNPLKDGSHPLA-------GGYRFNLTFRK 215
>gi|328766863|gb|EGF76915.1| hypothetical protein BATDEDRAFT_92196 [Batrachochytrium
dendrobatidis JAM81]
Length = 370
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ + LG +D QY R A P I HQ++ A +++ TG
Sbjct: 199 LRWVTLGHQYDWTRKQYHFDR--LHAFPDTIATITHQIL--------AFTQEL-TGYSSS 247
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG--DL 526
+ P+ + N+Y L HQD+ E +D P+VS S+G S FL +
Sbjct: 248 QWR-----PEAGVINWYHPGDTLMGHQDRSE----VDMTAPLVSLSVGLSCVFLISPCES 298
Query: 527 RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS---------MRRG 577
+D+ + L+SGDVLI +RR+FHGV + PDT P L+ T M
Sbjct: 299 KDI-TPTAIRLDSGDVLIMSKSARRVFHGVPLVIPDTCPDYLMHGTDSEWNAFAEWMDHS 357
Query: 578 RLNLTFRQ 585
RLN+ RQ
Sbjct: 358 RLNINVRQ 365
>gi|395647390|ref|ZP_10435240.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 221
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P P +P QL KA D A
Sbjct: 75 LGWTTDATGYRYSPVDPRSQQPWPSMPEAMRQLAVKAAAD----------------AGFT 118
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
SPD C+ N Y K+ LHQDK+E + S PVVS S+G A FL+G +
Sbjct: 119 QYSPDACLINRYIPGAKMSLHQDKNERRYS----EPVVSVSLGLPAIFLFGGHERSDKPQ 174
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
KV L GDV+++GG R FHGV I P M R+NLTFR
Sbjct: 175 KVSLFHGDVVVWGGVDRLRFHGVMPIKDGMHP-------IMGPQRINLTFR 218
>gi|311108476|ref|YP_003981329.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans A8]
gi|310763165|gb|ADP18614.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans A8]
Length = 219
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 71/172 (41%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F +L A EA P
Sbjct: 73 LGWTSDARGYRYARIDPLSGQPWPAMPEAFLRLAQTAAA----------------EAGFP 116
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y +L LHQDK+E D P+VS S+G A FL+G + A
Sbjct: 117 GFEPDACLVNRYEPGSRLSLHQDKNER----DYGAPIVSVSLGMPAMFLFGGDQRTDKAS 172
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG R +HG+ P L + R+N T R+
Sbjct: 173 RTPLFHGDVVVWGGVDRLRYHGI-------MPIKDLPHPRLGSQRINFTIRR 217
>gi|440231547|ref|YP_007345340.1| alkylated DNA repair protein [Serratia marcescens FGI94]
gi|440053252|gb|AGB83155.1| alkylated DNA repair protein [Serratia marcescens FGI94]
Length = 215
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+ A++
Sbjct: 114 FTPDSCLINRYDPGSKLSLHQDKDER----DFGAPIVSVSLGLPAVFQFGGLQRSDRARR 169
Query: 535 VILESGDVLIFGGKSRRIFHGVEKI 559
+ L GDV+++GG SR FHG+ +
Sbjct: 170 IPLAHGDVVVWGGPSRLCFHGILPV 194
>gi|409425979|ref|ZP_11260550.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
HYS]
Length = 218
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y +L LHQD+DE D P+VS S+G A F +G A +++
Sbjct: 117 FQPDACLVNCYQPGNRLSLHQDRDEH----DYSQPIVSVSLGLPAVFQFGGHSRNAPSQR 172
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ L GDV+++GG+ R FHGV + P P + R+NLT R+
Sbjct: 173 IGLRHGDVMVWGGEDRLRFHGVLPLKPGNHP-------VLGSRRINLTLRK 216
>gi|359800116|ref|ZP_09302667.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
arsenitoxydans SY8]
gi|359361914|gb|EHK63660.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
arsenitoxydans SY8]
Length = 219
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C G W + Y SR P G P +P F +L A EA
Sbjct: 70 CGGLGWTTDARGYRYSRIDPQSGQPWPAMPQSFLRLAADAAA----------------EA 113
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
P +PD C+ N Y +L LHQD++E D P+VS S+G A FL+G
Sbjct: 114 GFPGFAPDACLVNRYEPGSRLSLHQDRNER----DYAAPIVSVSLGMPAMFLFGGDARAD 169
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A++V L GDV+++GG R +HGV P L + R+N T R+
Sbjct: 170 RAERVPLFHGDVVVWGGVDRLRYHGV-------MPLQDLPHPQLGSVRINFTIRK 217
>gi|398840095|ref|ZP_10597333.1| alkylated DNA repair protein [Pseudomonas sp. GM102]
gi|398111113|gb|EJM01003.1| alkylated DNA repair protein [Pseudomonas sp. GM102]
Length = 226
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P G P +P F +L A + EA
Sbjct: 77 CGTWGWTTDRSGYQYTRNDPQTGNPWPEMPEVFFELAQAAAR----------------EA 120
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y ++ LHQDK+E + P+VS S+G A FL+G A
Sbjct: 121 GFMDFVPDSCLINRYIPGARMSLHQDKNEDSYAA----PIVSVSLGLPATFLFGGFERSA 176
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++V L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 177 KSQRVPLLHGDIVVWGGVDRLRYHGVLPIKEGYHPQ-------LGEQRINFTFR 223
>gi|77459162|ref|YP_348668.1| DNA-N1-methyladenine dioxygenase [Pseudomonas fluorescens Pf0-1]
gi|77383165|gb|ABA74678.1| alkylated DNA repair protein [Pseudomonas fluorescens Pf0-1]
Length = 220
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE+ P+VS S+G A F++G ++K+
Sbjct: 121 PDSCLINRYVPGAKMSLHQDKDENAYEA----PIVSLSLGLPATFVFGGFARGDRSQKIS 176
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++I+GG R +HG+ I P P+ + R NLTFR
Sbjct: 177 LLHGDMVIWGGVDRLRYHGILPIKPGRHPR-------LGEQRFNLTFR 217
>gi|395006635|ref|ZP_10390444.1| alkylated DNA repair protein [Acidovorax sp. CF316]
gi|394315415|gb|EJE52220.1| alkylated DNA repair protein [Acidovorax sp. CF316]
Length = 223
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ +L LHQDKDE P+VS S+G A FL+G A+++
Sbjct: 124 PDACLINRYAPGARLSLHQDKDERNHG----HPIVSVSLGIPAVFLFGGDARADKAQRIP 179
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R +HGV P + E R+NLTFR+
Sbjct: 180 LVHGDVVVWGGPARLRYHGV-------MPLAEAEHPLTGALRINLTFRK 221
>gi|357030827|ref|ZP_09092771.1| alkylated DNA repair protein AlkB [Gluconobacter morbifer G707]
gi|356415521|gb|EHH69164.1| alkylated DNA repair protein AlkB [Gluconobacter morbifer G707]
Length = 218
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 33/192 (17%)
Query: 396 FYQPGYRDGANLYLKMM-CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQ 452
F PG G ++ ++M C W D +Y + P G P +P F QL Q
Sbjct: 48 FLTPG---GRSMSVEMTSCGACGWYSDRRGYRYVRTDPQTGRPWPDMPPLFCQLA----Q 100
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D+ GR + P C+ N Y K+GLHQD+DE P+VS
Sbjct: 101 DA--------AGRAGFKG----FDPTSCLINRYGPGAKMGLHQDQDEDCPQA----PIVS 144
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
S+G A F +G L+ ++V L GDV+++GG SR +HGV + P++
Sbjct: 145 VSLGVPARFAFGGLKRNDPVRQVDLLHGDVVVWGGASRFAWHGVSPVRETFHPQT----E 200
Query: 573 SMRRGRLNLTFR 584
+M R NLTFR
Sbjct: 201 AM---RYNLTFR 209
>gi|157371400|ref|YP_001479389.1| 2OG-Fe(II) oxygenase [Serratia proteamaculans 568]
gi|157323164|gb|ABV42261.1| 2OG-Fe(II) oxygenase [Serratia proteamaculans 568]
Length = 215
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 404 GANLYLKMMCLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKI 461
G + + M G W D +Y G P IP L +A Q
Sbjct: 57 GHVMSVAMSWCGNGWSSDSRGYRYSERDSRSGKRWPPIPAILMALADEAAQ--------- 107
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+A PD C+ N Y KL LHQDKDE D P+VS S+G A F
Sbjct: 108 -------QAGFAPFVPDSCLMNRYDPGSKLSLHQDKDEH----DFGSPIVSVSLGLPAVF 156
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
+G ++ A+++ L GDV+++GG SR FHG+ I
Sbjct: 157 QFGGMQRSDRAQRIPLAHGDVVVWGGPSRLCFHGIMPI 194
>gi|398965838|ref|ZP_10681171.1| alkylated DNA repair protein [Pseudomonas sp. GM30]
gi|398146628|gb|EJM35361.1| alkylated DNA repair protein [Pseudomonas sp. GM30]
Length = 224
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE + P+VS S+G A FL+G ++++
Sbjct: 125 PDSCLINQYVPGAKMSLHQDKDEHAYAA----PIVSLSLGLPAMFLFGGFARGDKSQRIP 180
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R FHGV I P P+ + R+NLT R
Sbjct: 181 LLHGDMVVWGGVDRLRFHGVLPIKPGQHPR-------LGERRINLTLR 221
>gi|154254007|ref|YP_001414831.1| 2OG-Fe(II) oxygenase [Parvibaculum lavamentivorans DS-1]
gi|154157957|gb|ABS65174.1| 2OG-Fe(II) oxygenase [Parvibaculum lavamentivorans DS-1]
Length = 221
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
Query: 477 PDICIANFYSA-TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
P+ C+ N Y A ++GLH+D+DE E++D PV+S S+GD+ F G +K
Sbjct: 117 PECCLVNLYDAPKSRMGLHRDEDE--EALDA--PVLSLSLGDTCIFRVGGFARGDKSKSF 172
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGDVL+ GG SR +HGV+++ + L+ GR+NLT R+
Sbjct: 173 RLASGDVLVLGGASRLRYHGVDRVI--SGSSRLIPGG----GRINLTLRR 216
>gi|389872450|ref|YP_006379869.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Advenella
kashmirensis WT001]
gi|388537699|gb|AFK62887.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Advenella
kashmirensis WT001]
Length = 192
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD C+ N Y +L LHQDKDE+ D P+VS S+G A F +G L+ +K+
Sbjct: 92 TPDSCLINRYVPGARLSLHQDKDET----DFSAPIVSVSLGMPAMFQFGGLKRSDRPEKI 147
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GD++++GG R +HGV + + P LL R+NLTFR+
Sbjct: 148 PLFHGDIVVWGGPDRLRYHGVMALKDN--PHPLLGSN-----RINLTFRK 190
>gi|124268935|ref|YP_001022939.1| DNA-N1-methyladenine dioxygenase [Methylibium petroleiphilum PM1]
gi|124261710|gb|ABM96704.1| DNA-N1-methyladenine dioxygenase [Methylibium petroleiphilum PM1]
Length = 234
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P +PD C+ N Y +L LHQD++E D P+VS S+G A FL+G R
Sbjct: 131 PGFAPDACLINRYEPGARLSLHQDRNER----DFSAPIVSVSLGLPAVFLFGGGRRSDPT 186
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV ++GG SR +HGV + E + R+NLTFR+
Sbjct: 187 TRVPLVHGDVAVWGGPSRLRYHGVLALKDG-------EHAATGNCRINLTFRR 232
>gi|253995510|ref|YP_003047574.1| 2OG-Fe(II) oxygenase [Methylotenera mobilis JLW8]
gi|253982189|gb|ACT47047.1| 2OG-Fe(II) oxygenase [Methylotenera mobilis JLW8]
Length = 214
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 37/169 (21%)
Query: 417 NWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMS 476
WDP T Q P++P F L +A A P
Sbjct: 81 GWDPLTQQ----------AWPLMPASFAVLSQQAAT----------------LAGYPDFV 114
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
D C+ N Y ++GLHQDK+E D P+VS S+G +A F +G + A
Sbjct: 115 ADACLINRYQVGARMGLHQDKNER----DFSQPIVSVSLGLTATFQFGGFKRSDKALSFP 170
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R +HGV + P ++ R+NLTFR+
Sbjct: 171 LYHGDVVVWGGAARLRYHGVLPLKAGMHP-------ALGESRINLTFRK 212
>gi|46445920|ref|YP_007285.1| alkylated DNA repair protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399561|emb|CAF23010.1| probable alkylated DNA repair protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 222
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y + P G V P IP F +L +A + A
Sbjct: 75 LLGWVTDEAGYRYQSFDPLSGLVWPKIPPLFLELALEAAE----------------RAGY 118
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P C+ N Y K+ LHQDKDE + +D P+VS S+G A F +G
Sbjct: 119 SSFVPSACLINRYVPGAKMSLHQDKDE--DDLDS--PIVSVSLGLPATFQFGGFNRTDPL 174
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+K++L GDV+++GGK R +HG I P + L ++ R+NLTFR+
Sbjct: 175 QKLLLIHGDVVVWGGKLRLAYHG---ILPLKSGHHHLTGST----RINLTFRK 220
>gi|389877752|ref|YP_006371317.1| alkylated DNA repair protein [Tistrella mobilis KA081020-065]
gi|388528536|gb|AFK53733.1| alkylated DNA repair protein [Tistrella mobilis KA081020-065]
Length = 216
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
R A P PD C+ N Y+ +LG+HQD+DE D P+VS S+G A F +G
Sbjct: 102 RAATAAGFPGFRPDACLINLYTPGARLGMHQDRDEG----DLTQPIVSVSLGLPAVFQFG 157
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ L GDV+++GG R HGV+++ + P T R R+N+TFR
Sbjct: 158 GPSRRDPVTNIDLVHGDVVVWGGAWRLAHHGVKELRDGSHPA-----TGQR--RINITFR 210
>gi|398875822|ref|ZP_10630983.1| alkylated DNA repair protein [Pseudomonas sp. GM67]
gi|398205598|gb|EJM92378.1| alkylated DNA repair protein [Pseudomonas sp. GM67]
Length = 226
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE+ + P+VS S+G A FL+G +++V
Sbjct: 127 PDSCLINRYVPGAKMSLHQDKDEASYAA----PIVSVSLGLPAMFLFGGFERSDKSQRVP 182
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HGV I P+ M R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKDGQHPR-------MGEQRINFTFR 223
>gi|302186734|ref|ZP_07263407.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. syringae 642]
Length = 228
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD++E D PVVS S+G A F +G L +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRNE----YDHRWPVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|398885052|ref|ZP_10639972.1| alkylated DNA repair protein [Pseudomonas sp. GM60]
gi|398193093|gb|EJM80213.1| alkylated DNA repair protein [Pseudomonas sp. GM60]
Length = 221
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE+ + P+VS S+G A FL+G +++V
Sbjct: 122 PDSCLINRYVPGAKMSLHQDKDEASYAA----PIVSVSLGLPAMFLFGGFERSDKSQRVP 177
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HGV I P+ M R+N TFR
Sbjct: 178 LLHGDIVVWGGVDRLRYHGVLPIKDGQHPR-------MGEQRINFTFR 218
>gi|452127017|ref|ZP_21939600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
F627]
gi|451922112|gb|EMD72257.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
F627]
Length = 126
Score = 69.7 bits (169), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
D C+ N Y+ ++ LHQD++E D P+VS S+G A FL+G LR + +++L
Sbjct: 24 DACLINHYTPGARMSLHQDRNEQ----DFAAPIVSVSLGLPAIFLFGGLRRDDRSARIVL 79
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+ GDV ++GG R FHGV + P + R R+NLT R
Sbjct: 80 QHGDVAVWGGVDRLRFHGVLPLADGRHPM-------VGRQRINLTLRH 120
>gi|376286820|ref|YP_005159386.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
BH8]
gi|371584154|gb|AEX47819.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
BH8]
Length = 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V+ I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
+ +Y + VPP+ + A + + +++ + P+
Sbjct: 73 HYPSYRY-VDKIAGTTVPPV--------PDSLAALAPAALGAAAEVAEELAPWVETFVPE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y +G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSGMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|376283854|ref|YP_005157064.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
31A]
gi|371577369|gb|AEX41037.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
31A]
Length = 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V+ I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
+ +Y + VPP+ + A + + +++ + P+
Sbjct: 73 HYPSYRY-VDKIAGTTVPPV--------PDSLAALAPAALRAAAEVAEELAPWVETFVPE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y +G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSGMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|148553473|ref|YP_001261055.1| DNA-N1-methyladenine dioxygenase [Sphingomonas wittichii RW1]
gi|148498663|gb|ABQ66917.1| DNA-N1-methyladenine dioxygenase [Sphingomonas wittichii RW1]
Length = 214
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y +L LHQD++E D P++S S+G A FL+G R ++
Sbjct: 113 FQPDACLINRYIPGARLSLHQDRNER----DVAHPIISVSLGLPATFLFGGARRYDRPRR 168
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
LE D+ +GG SR FHGV ++ E + R R+NLTFR+
Sbjct: 169 FALEHCDIAAWGGPSRLHFHGVAELKDG-------EHDMLGRQRINLTFRK 212
>gi|408481777|ref|ZP_11187996.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
R81]
Length = 221
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y K+ LHQDK+E + S PVVS S+G A FL+G +K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERRYS----EPVVSISLGLPAIFLFGGHERSDKPRK 175
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L GDV+++GG R FHGV I P M R+NLTFR
Sbjct: 176 VSLFHGDVVVWGGVDRLRFHGVMPIKDGVHP-------IMGPQRINLTFR 218
>gi|333914654|ref|YP_004488386.1| 2OG-Fe(II) oxygenase [Delftia sp. Cs1-4]
gi|333744854|gb|AEF90031.1| 2OG-Fe(II) oxygenase [Delftia sp. Cs1-4]
Length = 216
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L + +V
Sbjct: 117 PDACLINQYLPGTRLSLHQDRDER----DLGAPIVSVSLGMPATFLFGGLARADSTARVP 172
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDV+++GG R HGV + P LL R+NLTFR+
Sbjct: 173 LQHGDVVVWGGVDRLRHHGVLPL--KDQPHPLLGGR-----RINLTFRK 214
>gi|424067954|ref|ZP_17805410.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407999298|gb|EKG39683.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 228
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD++E D PVVS S+G A F +G L +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|424072540|ref|ZP_17809961.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407997502|gb|EKG37939.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 228
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD++E D PVVS S+G A F +G L +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG+ R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|414173186|ref|ZP_11427949.1| alkylated DNA repair protein AlkB [Afipia broomeae ATCC 49717]
gi|410891838|gb|EKS39634.1| alkylated DNA repair protein AlkB [Afipia broomeae ATCC 49717]
Length = 215
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y KL LHQDKDE +D P+VS S+G A FL+G L +
Sbjct: 116 PDACLINRYEPGAKLSLHQDKDE----LDFNAPIVSVSLGLPATFLFGGLNRSDKTVRYR 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+ +GG +R +HGV P + E + R+NLTFR+
Sbjct: 172 LIHGDVVAWGGPARLAYHGV-------MPLAEGEHPLLGPQRINLTFRK 213
>gi|448242965|ref|YP_007407018.1| alkylated DNA repair protein [Serratia marcescens WW4]
gi|445213329|gb|AGE18999.1| alkylated DNA repair protein [Serratia marcescens WW4]
gi|453062043|gb|EMF03037.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia marcescens
VGH107]
Length = 215
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+ A+++
Sbjct: 116 PDSCLMNRYDPGSKLSLHQDKDEH----DFGAPIVSVSLGLPAVFQFGGLQRGDRARRIP 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKI 559
L GDV+++GG SR FHG+ +
Sbjct: 172 LAHGDVVVWGGPSRLCFHGILPV 194
>gi|398942633|ref|ZP_10670437.1| alkylated DNA repair protein [Pseudomonas sp. GM41(2012)]
gi|398160531|gb|EJM48800.1| alkylated DNA repair protein [Pseudomonas sp. GM41(2012)]
Length = 221
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P G P +P F +L A + EA
Sbjct: 72 CGVLGWTTDRSGYRYTRDDPLTGKPWPKMPEVFLELAQAAAR----------------EA 115
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y K+ LHQDKDE+ + P+VS S+G A FL+G
Sbjct: 116 GFADFVPDSCLINRYVPGAKMSLHQDKDEASYAA----PIVSVSLGLPAMFLFGGFERGD 171
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++V L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 172 KSQRVPLFHGDIVVWGGVDRLRYHGVLPIKDGLHPR-------LGEQRINFTFR 218
>gi|376289503|ref|YP_005161750.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
C7 (beta)]
gi|372102899|gb|AEX66496.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
C7 (beta)]
Length = 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V+ I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
+ +Y + D VPP+ + A + + +++ + +
Sbjct: 73 HYPSYRY-VDKIADTTVPPV--------PDSLAALAPAALRAAAEVAEELAPWVEAFVTE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y +G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSGMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|376292418|ref|YP_005164092.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC02]
gi|419859978|ref|ZP_14382624.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
gi|372109741|gb|AEX75801.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC02]
gi|387983565|gb|EIK57039.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
Length = 232
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 363 IGAKSNYIEAWYGITEEVKIVK----ICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNW 418
I ++ W G+ ++ ++V+ I R P +P + G + + + LG+ W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 419 DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPD 478
+ +Y + VPP+ + A + + +++ + P+
Sbjct: 73 HYPSYRY-VDKIAGTTVPPV--------PDSLAALAPAALRAAAEVAEELAPWVETFVPE 123
Query: 479 ICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN-AKKVIL 537
+ + N+Y +G+H D+ E + PV+S SIGD A F G V L
Sbjct: 124 MVLVNYYPPGSGMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATFP----DGCGLEQGRINITIRQ 222
>gi|290771264|dbj|BAI81891.1| alkB homolog [Schizosaccharomyces pombe]
Length = 297
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ + LG+ +D T +Y D + P P + V K +++S +
Sbjct: 135 LRWVTLGEQYDWTTKEY-----PDPSKSPGFPKDLGDFVEKVVKESTDFLH--------- 180
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+ I NFYS L H DES+E D LP++S S+G +L G
Sbjct: 181 ------WKAEAAIVNFYSPGDTLSAH--IDESEE--DLTLPLISLSMGLDCIYLIGTESR 230
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE-----ETSMRRGRLNLTF 583
+ L SGDV+I G SR+ FH V KI P++ P LL + + R R+N
Sbjct: 231 SEKPSALRLHSGDVVIMTGTSRKAFHAVPKIIPNSTPNYLLTGNKAWDGWISRKRVNFNV 290
Query: 584 RQ 585
RQ
Sbjct: 291 RQ 292
>gi|160899230|ref|YP_001564812.1| 2OG-Fe(II) oxygenase [Delftia acidovorans SPH-1]
gi|160364814|gb|ABX36427.1| 2OG-Fe(II) oxygenase [Delftia acidovorans SPH-1]
Length = 219
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G L +V
Sbjct: 120 PDACLINQYLPGTRLSLHQDRDER----DLGAPIVSVSLGMPATFLFGGLARADRTARVP 175
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L+ GDV+++GG R HGV + P LL R+NLTFR+
Sbjct: 176 LQHGDVVVWGGVDRLRHHGVLPL--KDQPHPLLGGR-----RINLTFRK 217
>gi|429241087|ref|NP_596553.3| alpha-ketoglutarate-dependent dioxygenase [Schizosaccharomyces
pombe 972h-]
gi|408360323|sp|O60066.3|ALKBH_SCHPO RecName: Full=Alpha-ketoglutarate-dependent dioxygenase abh1;
AltName: Full=Alkylated DNA repair protein alkB homolog
gi|347834387|emb|CAA18657.3| alkB homolog/2-OG-Fe(II) oxygenase family (predicted)
[Schizosaccharomyces pombe]
Length = 302
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ + LG+ +D T +Y D + P P + V K +++S +
Sbjct: 140 LRWVTLGEQYDWTTKEY-----PDPSKSPGFPKDLGDFVEKVVKESTDFLH--------- 185
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+ I NFYS L H DES+E D LP++S S+G +L G
Sbjct: 186 ------WKAEAAIVNFYSPGDTLSAH--IDESEE--DLTLPLISLSMGLDCIYLIGTESR 235
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE-----ETSMRRGRLNLTF 583
+ L SGDV+I G SR+ FH V KI P++ P LL + + R R+N
Sbjct: 236 SEKPSALRLHSGDVVIMTGTSRKAFHAVPKIIPNSTPNYLLTGNKAWDGWISRKRVNFNV 295
Query: 584 RQ 585
RQ
Sbjct: 296 RQ 297
>gi|340788425|ref|YP_004753890.1| alkylated DNA repair protein AlkB [Collimonas fungivorans Ter331]
gi|340553692|gb|AEK63067.1| Alkylated DNA repair protein AlkB [Collimonas fungivorans Ter331]
Length = 228
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G A +V
Sbjct: 129 PDACLINRYQPGTRLTLHQDKDEQ----DYAAPIVSVSLGIPAMFLFGGHERSDKAARVP 184
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG R +HGV P E + R+NLTFR+
Sbjct: 185 LFHGDVVVWGGVDRLRYHGV-------LPLKEAEHPLLGGQRINLTFRK 226
>gi|398905346|ref|ZP_10652771.1| alkylated DNA repair protein [Pseudomonas sp. GM50]
gi|398174592|gb|EJM62382.1| alkylated DNA repair protein [Pseudomonas sp. GM50]
Length = 226
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P G P +P F +L A + EA
Sbjct: 77 CGTWGWTTDRSGYQYTRNDPQTGDPWPEMPKVFFELAQAAAR----------------EA 120
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y ++ LHQDK+E + P+VS S+G A FL+G A
Sbjct: 121 GFIDFVPDSCLINRYIPGARMSLHQDKNEDSYAA----PIVSVSLGLPATFLFGGFERSA 176
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++V L GD++++GG R +HG+ I P+ + R+N TFR
Sbjct: 177 KSQRVPLLHGDIVVWGGVDRLRYHGILPIKEGYHPQ-------LGEQRINFTFR 223
>gi|312960795|ref|ZP_07775300.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens WH6]
gi|311284453|gb|EFQ63029.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens WH6]
Length = 221
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y K+ LHQDK+E D PVVS S+G A FL+G KK
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNER----DYRAPVVSVSLGLPAIFLFGGRERSDKPKK 175
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ L GDV+I+GG R FHGV I P M R+NLT R
Sbjct: 176 IPLFHGDVVIWGGIDRLRFHGVMPIKDGVHP-------IMGAQRINLTLR 218
>gi|290998193|ref|XP_002681665.1| predicted protein [Naegleria gruberi]
gi|284095290|gb|EFC48921.1| predicted protein [Naegleria gruberi]
Length = 314
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I NFYS +G H D E + + P++S SIG + FL G K +
Sbjct: 177 PEAAIVNFYSKDRLMGGHVDDAEYEMT----KPIISLSIGSKSIFLLGGETRDTEPKAIF 232
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
LESGD +I GG++R FHG+ +I DT P+ L
Sbjct: 233 LESGDCMIMGGRARYCFHGIARILKDTIPEYL 264
>gi|383817221|ref|ZP_09972599.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia sp. M24T3]
gi|383293912|gb|EIC82268.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia sp. M24T3]
Length = 217
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE D P+VS S+G A F +G L ++V
Sbjct: 118 PDACLINRYQIGAKMSLHQDKDEE----DMGQPIVSISLGLPAVFQFGGLERSDKTQRVN 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GD++++GG +R +HG+ P E + R NLTFR+
Sbjct: 174 LTHGDIVVWGGPARLRYHGI-------LPLKAGEHPLTGQYRFNLTFRK 215
>gi|70730772|ref|YP_260513.1| alkylated DNA repair protein AlkB [Pseudomonas protegens Pf-5]
gi|68345071|gb|AAY92677.1| alkylated DNA repair protein AlkB [Pseudomonas protegens Pf-5]
Length = 226
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P +PD C+ N Y K+ LHQDK+E D P+VS S+G A FL+G +
Sbjct: 122 FPGFAPDSCLINCYRPGAKMSLHQDKNER----DYSAPIVSLSLGLPAIFLFGGRQRSDK 177
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+++V L GDV+++GG R +HGV + P LL + R+NLT R+
Sbjct: 178 SQRVALLHGDVVVWGGVDRLRYHGVLALKDGHHP--LLGQQ-----RINLTLRR 224
>gi|393777206|ref|ZP_10365499.1| alkylated DNA repair protein AlkB [Ralstonia sp. PBA]
gi|392715907|gb|EIZ03488.1| alkylated DNA repair protein AlkB [Ralstonia sp. PBA]
Length = 217
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQD++E D P+VS S+G F +G ++ ++V
Sbjct: 118 PDACLVNRYAPGARMSLHQDRNER----DMTQPIVSVSLGLPVIFQFGGMQRSERPRRVP 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R +HGV + D P + R+NLTFR+
Sbjct: 174 LMHGDVVVWGGPARLRYHGVLALKDDVHPLT-------GNCRINLTFRK 215
>gi|388581174|gb|EIM21484.1| hypothetical protein WALSEDRAFT_60458 [Wallemia sebi CBS 633.66]
Length = 382
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD-LRDVANA-KK 534
PD I N+Y+ L H D+ E + LP+VS S+G SA L GD +R+ N
Sbjct: 252 PDAGIINYYNLNDTLMAHVDRSE----VTATLPLVSISLGHSAILLIGDDIRESINPPTA 307
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS----------MRRGRLNLTFR 584
++L SGDV++ G +RR +HGV +I T P+ L + + + R+N+ R
Sbjct: 308 IVLRSGDVIVMSGPTRRSYHGVPRILERTLPEHLKSQEDDEEWEPYARYLSKTRINVNVR 367
Query: 585 Q 585
Q
Sbjct: 368 Q 368
>gi|402216759|gb|EJT96843.1| hypothetical protein DACRYDRAFT_97473 [Dacryopinax sp. DJM-731 SS1]
Length = 428
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+PD I NFYS + L H D E +D P+VS S+G + FL G + V
Sbjct: 296 TPDAGIVNFYSLSDTLMAHIDHSE----LDATRPLVSLSLGHACVFLIGGPTRETEPRAV 351
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
+L SGD L+ G RR +HGV ++ T PK + ++
Sbjct: 352 LLRSGDALLMSGPCRRWYHGVPRVLEGTLPKWMWDD 387
>gi|322834330|ref|YP_004214357.1| 2OG-Fe(II) oxygenase [Rahnella sp. Y9602]
gi|384259509|ref|YP_005403443.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rahnella aquatilis
HX2]
gi|321169531|gb|ADW75230.1| 2OG-Fe(II) oxygenase [Rahnella sp. Y9602]
gi|380755485|gb|AFE59876.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rahnella aquatilis
HX2]
Length = 217
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A PD C+ N Y K+ LHQDKDE D P+VS S+G A F +G +
Sbjct: 110 QAGFAGFEPDACLINRYQPGAKMSLHQDKDEH----DFGQPIVSVSLGLPAVFQFGGMER 165
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
++V L GD++++GG SR +HGV P E R NLTFR+
Sbjct: 166 SDKTQRVPLMHGDIVVWGGPSRLRYHGV-------LPLKAGEHPLTGSYRFNLTFRK 215
>gi|398990575|ref|ZP_10693755.1| alkylated DNA repair protein [Pseudomonas sp. GM24]
gi|399012963|ref|ZP_10715280.1| alkylated DNA repair protein [Pseudomonas sp. GM16]
gi|398114780|gb|EJM04583.1| alkylated DNA repair protein [Pseudomonas sp. GM16]
gi|398143942|gb|EJM32807.1| alkylated DNA repair protein [Pseudomonas sp. GM24]
Length = 221
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 478 DICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVIL 537
D C+ N Y K+ LHQDKDE S P+VS S+G A FL+G ++++ L
Sbjct: 123 DSCLINRYVPGAKMSLHQDKDEKAYSA----PIVSLSLGLPAMFLFGGFNRSDKSQRIAL 178
Query: 538 ESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
GD++++GG R FHGV I P+ + R+NLTFR
Sbjct: 179 LHGDMVVWGGVDRLRFHGVLPIKQGRHPR-------LGEQRINLTFR 218
>gi|372489708|ref|YP_005029273.1| alkylated DNA repair protein [Dechlorosoma suillum PS]
gi|359356261|gb|AEV27432.1| alkylated DNA repair protein [Dechlorosoma suillum PS]
Length = 220
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
A P PD C+ N Y+ +L LHQD+DE D P+VS S+G A FL G
Sbjct: 113 AGFPGFVPDACLINRYAPGTRLSLHQDRDEE----DFSQPIVSLSLGLPAVFLLGGASRN 168
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
K+ L GDVL++GG R FHGV+ +
Sbjct: 169 DKTVKIPLLHGDVLVWGGPDRLRFHGVQPV 198
>gi|407365114|ref|ZP_11111646.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
mandelii JR-1]
Length = 226
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S Y +R P G P +P F +L A + EA
Sbjct: 77 CGTWGWTTDRSGYRYTRNNPQTGRPWPEMPDVFFELAQAAAR----------------EA 120
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
PD C+ N Y K+ LHQDK+E + P+VS S+G A FL+G
Sbjct: 121 GFAGFVPDSCLINRYVPGAKMSLHQDKNEGSYAA----PIVSVSLGLPAMFLFGGFERSD 176
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+++V L GD++++GG R +HGV I D L E+ R+N TFR
Sbjct: 177 KSQRVPLLHGDIVVWGGVDRLRYHGVLPI-KDGHHPHLGEQ------RINFTFR 223
>gi|78066397|ref|YP_369166.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
gi|77967142|gb|ABB08522.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
Length = 214
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y+ +L LHQDK+E D P+VS S+G A FL+G K
Sbjct: 113 FEPDACLVNRYAPGARLSLHQDKNEQ----DFNAPIVSVSLGMKAVFLFGGHERSDPTTK 168
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V L GDV ++GG R +HGV + D P LL R R+N TFR+
Sbjct: 169 VPLYHGDVAVWGGVDRLRYHGVMPLKED--PHGLLG-----RQRINFTFRK 212
>gi|182678752|ref|YP_001832898.1| 2OG-Fe(II) oxygenase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634635|gb|ACB95409.1| 2OG-Fe(II) oxygenase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 232
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 342 VMLNPSLLVTNRQKRNDLKLSIGA---KSNYIEAWYGITEEVKIVKICRDLG--LGPGGF 396
V N SLL+ +R + GA ++ ++ G+ EEV+ + + PGGF
Sbjct: 15 VRQNESLLLPFETQRIIEPFADGAVLLRAEVLDKAEGLLEEVRAIAHAAPFRRMVTPGGF 74
Query: 397 YQPGYRDGANLYLKMM-CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQD 453
+ + M C W D +YG P G P +P F + A +
Sbjct: 75 ---------TMSVAMTNCGDTGWITDRRGYRYGAIDPESGHQWPAMPALFRAVAVTAAE- 124
Query: 454 SRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSF 513
A PD C+ N Y ++ LHQDK+E D P+VS
Sbjct: 125 ---------------RAGYVGFEPDACLINRYEPGSRMSLHQDKNER----DFAQPIVSV 165
Query: 514 SIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS 573
S+G A F +G +K+ L+ DV+++GG SR HGV + P S
Sbjct: 166 SLGLLATFQFGGATRKDPVRKIFLDHADVVVWGGASRLNHHGVLTLKNGWHP-------S 218
Query: 574 MRRGRLNLTFRQ 585
R R NLTFR+
Sbjct: 219 TGRVRYNLTFRK 230
>gi|389774867|ref|ZP_10192986.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
spathiphylli B39]
gi|388438466|gb|EIL95221.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
spathiphylli B39]
Length = 217
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD+DE D P+VS S+G A FL+G + A +V
Sbjct: 118 PDACLINRYEPGTRLSLHQDRDER----DFGQPIVSVSLGIPAIFLFGGDQRSDAAMRVP 173
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG +R HGV + P+ ++ R+NLTFR+
Sbjct: 174 LAHGDVVVWGGPARLRHHGVLPLKPN-------HHEALGECRINLTFRR 215
>gi|432936607|ref|XP_004082191.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Oryzias latipes]
Length = 372
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 30/140 (21%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P + I N+Y LG+H D+ E +D P++SFS G SA FL G R
Sbjct: 191 FPGFRSEAAILNYYRPDSSLGIHVDESE----LDHTRPLLSFSFGQSAIFLLGGTRRQDP 246
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFP----------DTAPKS------LLEETS-- 573
+++ SGDV++ G+SR ++H V +I P D P S +LE S
Sbjct: 247 PTAMLVHSGDVMVMSGQSRLLYHAVPRILPTPRGHGALLEDLRPASPQQAAAMLEPVSEE 306
Query: 574 --------MRRGRLNLTFRQ 585
+++ RLN+T RQ
Sbjct: 307 DWMACSVYIQKSRLNMTVRQ 326
>gi|399065742|ref|ZP_10748043.1| alkylated DNA repair protein [Novosphingobium sp. AP12]
gi|398029271|gb|EJL22752.1| alkylated DNA repair protein [Novosphingobium sp. AP12]
Length = 219
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD++E D P+VS S+G +A FL+G +V
Sbjct: 121 PDSCLMNRYEPGSRLSLHQDRNER----DFDAPIVSVSLGLAATFLWGGATRSGKPMRVR 176
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GDV+++GG +R FHGV+ + SL E R NLTFR
Sbjct: 177 LFHGDVVVWGGPARLTFHGVDTL---RGSVSLAGEF-----RYNLTFR 216
>gi|293395379|ref|ZP_06639663.1| alkylated DNA repair protein AlkB [Serratia odorifera DSM 4582]
gi|291422063|gb|EFE95308.1| alkylated DNA repair protein AlkB [Serratia odorifera DSM 4582]
Length = 215
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y KL LHQDKDE D P+VS S+G A F +G L+ +++
Sbjct: 116 PDSCLMNRYDPGSKLSLHQDKDEH----DFGSPIVSVSLGLPAVFQFGGLQRSDKTRRIP 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKI 559
L GDV+++GG SR FHG+ +
Sbjct: 172 LAHGDVVVWGGPSRLCFHGIMPV 194
>gi|398874169|ref|ZP_10629399.1| alkylated DNA repair protein [Pseudomonas sp. GM74]
gi|398196440|gb|EJM83447.1| alkylated DNA repair protein [Pseudomonas sp. GM74]
Length = 226
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE + P+VS S+G A FL+G +++V
Sbjct: 127 PDSCLINRYVPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAMFLFGGFVRSDKSQRVP 182
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HGV I PK + R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKDGHHPK-------LGEQRINFTFR 223
>gi|302691072|ref|XP_003035215.1| hypothetical protein SCHCODRAFT_14388 [Schizophyllum commune H4-8]
gi|300108911|gb|EFJ00313.1| hypothetical protein SCHCODRAFT_14388 [Schizophyllum commune H4-8]
Length = 424
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS S+G++A FL G A ++
Sbjct: 297 PDAGIVNFYQTQDTLMGHVDRSE----VCATSPLVSISLGNAAVFLIGSTTRDAAPTPIL 352
Query: 537 LESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSLLE---------ETSMRRGRLNLTFRQ 585
L SGDV+I G + RR +HGV +I DT P L E M+ R+N+ RQ
Sbjct: 353 LRSGDVVIMSGPACRRAYHGVPRILEDTLPPHLRRNGDPEWEPFEEYMQTTRVNVNVRQ 411
>gi|398926576|ref|ZP_10662538.1| alkylated DNA repair protein [Pseudomonas sp. GM48]
gi|398170650|gb|EJM58581.1| alkylated DNA repair protein [Pseudomonas sp. GM48]
Length = 226
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE + P+VS S+G A FL+G + +++V
Sbjct: 127 PDSCLINRYIPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAMFLFGGFKRSDKSQRVP 182
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKEGHHPR-------LGEQRINFTFR 223
>gi|440736939|ref|ZP_20916521.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens BRIP34879]
gi|440382596|gb|ELQ19091.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens BRIP34879]
Length = 221
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y + P + P +P QL +A ++ G D
Sbjct: 74 ALGWTTDSTGYRYSPTDPNNQQPWPALPDALRQLAEQAAANA---------GFSDF---- 120
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
+PD C+ N Y K+ LHQDK+E + PVVS S+G A FL+G
Sbjct: 121 ---APDACLINRYVPGAKMSLHQDKNERHYAA----PVVSVSLGLPAIFLFGGHARSDKP 173
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+KV L GDV+++GG R FHGV I P M R+NLT R
Sbjct: 174 QKVSLFHGDVVVWGGVDRLRFHGVMPIKDGKHP-------IMGPQRINLTLR 218
>gi|254419984|ref|ZP_05033708.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Brevundimonas sp.
BAL3]
gi|196186161|gb|EDX81137.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Brevundimonas sp.
BAL3]
Length = 209
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+GLHQDKDE+ D PV+S S+GD+A F G + +
Sbjct: 106 PDACLVNLYREGAKMGLHQDKDEA----DLGAPVLSVSLGDAAMFRIGAA-EGGRTTTLR 160
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRR----GRLNLTFR 584
L+SGDV G +R HG++++ E S R GRLNLT R
Sbjct: 161 LDSGDVCALTGPARLARHGIDRVL----------EGSSRLIPGGGRLNLTLR 202
>gi|321265255|ref|XP_003197344.1| hypothetical protein CGB_M2030C [Cryptococcus gattii WM276]
gi|317463823|gb|ADV25557.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 427
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKV 535
PD I NFY L H D+ E + +D P+VS S+G +A L G D RD + +
Sbjct: 300 PDTGIVNFYQLNDTLMAHVDRAEDR--LDPARPLVSVSLGHAAILLLGSDSRDEV-PRPI 356
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS-----------MRRGRLNLTFR 584
IL SGD+LI GK R+ +HGV +I + P L + S + R+N+ R
Sbjct: 357 ILRSGDMLIMSGKGRQAYHGVPRILEGSLPSHFLVQESDSEKMKAAKNWISTARININAR 416
Query: 585 Q 585
Q
Sbjct: 417 Q 417
>gi|422321269|ref|ZP_16402318.1| 2OG-Fe(II) oxygenase [Achromobacter xylosoxidans C54]
gi|317403872|gb|EFV84345.1| 2OG-Fe(II) oxygenase [Achromobacter xylosoxidans C54]
Length = 219
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P +PD C+ N Y +L LHQDKDE D P+VS S+G A FL+G
Sbjct: 115 FPGFAPDACLVNRYQPGSRLSLHQDKDER----DYGAPIVSVSLGMPAVFLFGGHARGDR 170
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A V L GDV+++GG R +HGV + P L R+N T RQ
Sbjct: 171 AVHVPLFHGDVVVWGGVDRLRYHGVLPL--KDRPHPTLGSV-----RINFTIRQ 217
>gi|423096095|ref|ZP_17083891.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q2-87]
gi|397887278|gb|EJL03761.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q2-87]
Length = 225
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y ++ LHQDK+E + + P+VS S+G A F +G +++
Sbjct: 124 FEPDSCLINRYVPGARMSLHQDKNERELTA----PIVSMSLGLPATFQFGGFERSDKSQR 179
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L GD++++GG R +HGV + P P+ + R+NLTFR
Sbjct: 180 VPLFHGDIVVWGGVDRLRYHGVLPLKPGEHPR-------LGAQRINLTFR 222
>gi|398894434|ref|ZP_10646671.1| alkylated DNA repair protein [Pseudomonas sp. GM55]
gi|398182462|gb|EJM69978.1| alkylated DNA repair protein [Pseudomonas sp. GM55]
Length = 226
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y K+ LHQDKDE S D P+VS S+G A FL+G +++
Sbjct: 125 FAPDSCLINRYIPGAKMSLHQDKDE--HSYDA--PIVSVSLGLPAMFLFGGFARSDKSQR 180
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 181 IPLLHGDIVVWGGVDRLRYHGVLPIKDGHHPR-------LGEQRINFTFR 223
>gi|440721132|ref|ZP_20901537.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34876]
gi|440729297|ref|ZP_20909480.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34881]
gi|443643584|ref|ZP_21127434.1| Alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
syringae B64]
gi|440359199|gb|ELP96524.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34881]
gi|440364221|gb|ELQ01357.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34876]
gi|443283601|gb|ELS42606.1| Alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
syringae B64]
Length = 228
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQD++E D PVVS S+G A F +G L +++
Sbjct: 126 PDACLINCYIPGAKMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++G + R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGDEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|429770172|ref|ZP_19302251.1| putative alkylated DNA repair protein AlkB [Brevundimonas diminuta
470-4]
gi|429185434|gb|EKY26414.1| putative alkylated DNA repair protein AlkB [Brevundimonas diminuta
470-4]
Length = 216
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 86/221 (38%), Gaps = 39/221 (17%)
Query: 373 WYGITEEVKIVKICRDL--GLGPGGFYQPGYRDGANLYLKMMCLGK-NW--DPETSQYGT 427
W G+ + + ++ GL Y+P G ++M G W D +Y
Sbjct: 23 WPGLLDATAQADLLAEVRAGLEAAPLYRPTTPGGRPFSVRMSNFGALGWVSDRAGYRYQP 82
Query: 428 SRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSA 487
P GA P IP L D P PD C+ N Y
Sbjct: 83 PHPVTGAPWPAIPARLLSL-------------------WDALTGWPS-PPDACLINLYQG 122
Query: 488 TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN----AKKVILESGDVL 543
K+GLHQD+DE D PV+S S+GD+A F G D V L SGDV
Sbjct: 123 EAKMGLHQDRDER----DLTAPVLSVSLGDTAVFRIGPAPDETGKGGATSTVRLASGDVC 178
Query: 544 IFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
G +R HG++++ ++ LL GR+NLT R
Sbjct: 179 ALTGPARLARHGIDRLLAGSS--RLLPGG----GRVNLTLR 213
>gi|335044493|ref|ZP_08537518.1| alkylated DNA repair protein [Methylophaga aminisulfidivorans MP]
gi|333787739|gb|EGL53623.1| alkylated DNA repair protein [Methylophaga aminisulfidivorans MP]
Length = 210
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 470 AELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDV 529
E P+ C+ N Y+ +GLHQDKDE D P+VS S+G A F +G +
Sbjct: 100 VEFQHFQPNACLINQYTPGVGMGLHQDKDEK----DFTQPIVSVSLGVPAIFQFGSNKRN 155
Query: 530 ANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+LE GD++I+GG R FHG++ P L + R NLTFR
Sbjct: 156 ETPNYHLLEHGDIVIWGGVDRLRFHGIK-------PIKLAHHPLTGQFRYNLTFR 203
>gi|389740459|gb|EIM81650.1| hypothetical protein STEHIDRAFT_142212 [Stereum hirsutum FP-91666
SS1]
Length = 477
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 459 EKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDS 518
E G +D PD I NFY L H D+ E + P+VS S+G++
Sbjct: 310 EGWGDGEQDWHTWTDSYEPDAGIVNFYQTKDTLMGHVDRSE----VCATSPLVSISLGNA 365
Query: 519 AEFLYGDLRDVANAKKVILESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSLLEETSMRRG 577
A FL G L V+L SGDVLI G + RR +HGV +I ++ P+ L + S
Sbjct: 366 AVFLIGGLTRDVEPVPVLLRSGDVLIMSGPACRRAYHGVPRILENSLPEHLAYDPSSSSP 425
Query: 578 RLNL 581
LN
Sbjct: 426 ALNW 429
>gi|328849570|gb|EGF98748.1| hypothetical protein MELLADRAFT_58012 [Melampsora larici-populina
98AG31]
Length = 128
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 16/119 (13%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ + NFY L H D S+ S+D P+VS SIG++ FL G RD +
Sbjct: 14 PEAGVINFYQYKDSLTAH--VDHSEVSVDS--PLVSLSIGNACVFLIGPNRD-ETPLALR 68
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRR----------GRLNLTFRQ 585
LESGD LI G+SRR FHGV +I ++ P S L +T GR+NL RQ
Sbjct: 69 LESGDALIMAGESRRFFHGVPRIIENSLP-SWLSQTQEEDVCWTDWFKNGGRINLNVRQ 126
>gi|118404160|ref|NP_001072394.1| alkB, alkylation repair homolog 1 [Xenopus (Silurana) tropicalis]
gi|111309104|gb|AAI21592.1| alkB, alkylation repair homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N+Y LG+H D+ E +D P++SFS G S FL G L ++
Sbjct: 30 PEAGILNYYHLDSSLGIHVDESE----LDHQSPLLSFSFGQSCIFLLGGLNREHMPTPMM 85
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFP-----------------DTAPKSLLEETS------ 573
+ SGD+++ G+SR ++H V +I P +T+ L+E S
Sbjct: 86 MHSGDIMVMSGQSRLLYHAVPRILPFPGGDMLPPCLSVPPATETSDPPLIEPCSTLDWEV 145
Query: 574 ----MRRGRLNLTFRQ 585
+RR R+N+T RQ
Sbjct: 146 CAQYLRRSRINMTVRQ 161
>gi|392567663|gb|EIW60838.1| hypothetical protein TRAVEDRAFT_36424 [Trametes versicolor
FP-101664 SS1]
Length = 455
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E I P+VS S+G +A FL G L ++
Sbjct: 321 PDAGIVNFYQTKDTLMAHVDRSE----ISATSPLVSISLGCAAVFLIGGLTRDDPPTPIL 376
Query: 537 LESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSL-------LEETSMRRGRLNLTFRQ 585
L SGDV++ G + RR +HGV +I T P + + E +R R+N+ RQ
Sbjct: 377 LRSGDVVVMSGPACRRAYHGVPRILEGTLPSHMEGGDDWDIYEEYLRATRINVNVRQ 433
>gi|398915078|ref|ZP_10657134.1| alkylated DNA repair protein [Pseudomonas sp. GM49]
gi|398177003|gb|EJM64700.1| alkylated DNA repair protein [Pseudomonas sp. GM49]
Length = 226
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y K+ LHQDKDE + P+VS S+G A FL+G + ++
Sbjct: 125 FAPDSCLINRYIPGAKMSLHQDKDEYSYAA----PIVSVSLGLPAMFLFGGFKRSDKNQR 180
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 181 VPLLHGDIVVWGGVDRLRYHGVLPIKDGHHPR-------LGGQRINFTFR 223
>gi|425899912|ref|ZP_18876503.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889790|gb|EJL06272.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 224
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A PD C+ N Y ++ LHQDKDE D +P+VS S+G A F G R
Sbjct: 117 QAGFAGFEPDACLINHYVPGARMSLHQDKDER----DYDVPIVSVSLGLPAVFQLGGERR 172
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGV----EKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+V L GDV+++GG R +HGV E P P+ R+NLTFR
Sbjct: 173 SDRPLRVPLLHGDVVVWGGVDRLRYHGVLPLKEGTHPLLGPR-----------RINLTFR 221
Query: 585 Q 585
+
Sbjct: 222 R 222
>gi|33591569|ref|NP_879213.1| alkylated DNA repair protein [Bordetella pertussis Tohama I]
gi|33603634|ref|NP_891194.1| alkylated DNA repair protein [Bordetella bronchiseptica RB50]
gi|384202855|ref|YP_005588594.1| alkylated DNA repair protein [Bordetella pertussis CS]
gi|408417085|ref|YP_006627792.1| alkylated DNA repair protein [Bordetella pertussis 18323]
gi|410422112|ref|YP_006902561.1| alkylated DNA repair protein [Bordetella bronchiseptica MO149]
gi|410474709|ref|YP_006897990.1| alkylated DNA repair protein [Bordetella parapertussis Bpp5]
gi|412341042|ref|YP_006969797.1| alkylated DNA repair protein [Bordetella bronchiseptica 253]
gi|427816645|ref|ZP_18983709.1| alkylated DNA repair protein [Bordetella bronchiseptica 1289]
gi|427820131|ref|ZP_18987194.1| alkylated DNA repair protein [Bordetella bronchiseptica D445]
gi|427822725|ref|ZP_18989787.1| alkylated DNA repair protein [Bordetella bronchiseptica Bbr77]
gi|33571211|emb|CAE40717.1| alkylated DNA repair protein [Bordetella pertussis Tohama I]
gi|33577759|emb|CAE35024.1| alkylated DNA repair protein [Bordetella bronchiseptica RB50]
gi|332380969|gb|AEE65816.1| alkylated DNA repair protein [Bordetella pertussis CS]
gi|401779255|emb|CCJ64756.1| alkylated DNA repair protein [Bordetella pertussis 18323]
gi|408444819|emb|CCJ51595.1| alkylated DNA repair protein [Bordetella parapertussis Bpp5]
gi|408449407|emb|CCJ61095.1| alkylated DNA repair protein [Bordetella bronchiseptica MO149]
gi|408770876|emb|CCJ55675.1| alkylated DNA repair protein [Bordetella bronchiseptica 253]
gi|410567645|emb|CCN25216.1| alkylated DNA repair protein [Bordetella bronchiseptica 1289]
gi|410571131|emb|CCN19345.1| alkylated DNA repair protein [Bordetella bronchiseptica D445]
gi|410587990|emb|CCN03041.1| alkylated DNA repair protein [Bordetella bronchiseptica Bbr77]
Length = 216
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQDK+E D P+VS S+G A FL+G R ++
Sbjct: 116 PDACLVNRYAPGARMSLHQDKNER----DFGAPIVSVSLGLPAMFLFGGARRDERPARIP 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV ++GG R +HGV P + + + R R+N T R+
Sbjct: 172 LLHGDVAVWGGVDRLRYHGV-------MPLAEGQHPLLGRQRINFTLRR 213
>gi|33598680|ref|NP_886323.1| alkylated DNA repair protein [Bordetella parapertussis 12822]
gi|33574810|emb|CAE39471.1| alkylated DNA repair protein [Bordetella parapertussis]
Length = 216
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y+ ++ LHQDK+E D P+VS S+G A FL+G R ++
Sbjct: 116 PDACLVNRYAPGARMSLHQDKNER----DFGAPIVSVSLGLPAMFLFGGARRDERPARIP 171
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV ++GG R +HGV P + + + R R+N T R+
Sbjct: 172 LLHGDVAVWGGVDRLRYHGV-------MPLAEGQHPLLGRQRINFTLRR 213
>gi|403420522|emb|CCM07222.1| predicted protein [Fibroporia radiculosa]
Length = 454
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS S+G +A FL G L ++
Sbjct: 313 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGCAAIFLIGGLTRDVEPTAIL 368
Query: 537 LESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSL---------LEETSMRRGRLNLTFRQ 585
L SGDV+I G + RR +HGV +I T P L L E + R+N+ RQ
Sbjct: 369 LRSGDVVIMSGPACRRAYHGVPRILEGTLPPHLEAGVDAGWQLYEEYLHSARINVNVRQ 427
>gi|389684449|ref|ZP_10175777.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis O6]
gi|388551672|gb|EIM14937.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis O6]
Length = 224
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F +L A +A
Sbjct: 78 LGWTTDRSGYRYTAIDPQSGQPWPAMPEVFRELAQAAA----------------TQAGFA 121
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
PD C+ N Y ++ LHQDKDE D P+VS S+G A F G R
Sbjct: 122 GFDPDACLINHYVPGARMSLHQDKDER----DYDAPIVSVSLGLPAVFQLGGERRSDRPL 177
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG R +HGV + T P LL R+NLTFR+
Sbjct: 178 RVPLLHGDVVVWGGVDRLRYHGVLPLKDGTHP--LLGPR-----RINLTFRR 222
>gi|447916685|ref|YP_007397253.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas poae
RE*1-1-14]
gi|445200548|gb|AGE25757.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas poae
RE*1-1-14]
Length = 221
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 73/172 (42%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P + P +P QL +A ++ G D
Sbjct: 74 ALGWTTDSTGYRYSPIDPNNQQPWPALPDALRQLAEQAAANA---------GFSDF---- 120
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
+PD C+ N Y K+ LHQDK+E + PVVS S+G A FL+G
Sbjct: 121 ---APDACLINRYVPGAKMSLHQDKNERHYAA----PVVSVSLGLPAIFLFGGHARSDKP 173
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+KV L GDV+++GG R FHGV I P M R+NLT R
Sbjct: 174 QKVSLFHGDVVVWGGVDRLRFHGVMPIKDGKHP-------IMGPQRINLTLR 218
>gi|426409307|ref|YP_007029406.1| alkylated DNA repair protein AlkB [Pseudomonas sp. UW4]
gi|426267524|gb|AFY19601.1| alkylated DNA repair protein AlkB [Pseudomonas sp. UW4]
Length = 226
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE + P+VS S+G A FL+G ++++
Sbjct: 127 PDSCLINRYIPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAIFLFGGFARSDKSQRIP 182
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 183 LLHGDIVVWGGMDRLRYHGVLPIKDGCHPR-------LGEQRINFTFR 223
>gi|421481580|ref|ZP_15929163.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
piechaudii HLE]
gi|400199895|gb|EJO32848.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
piechaudii HLE]
Length = 221
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P +PD C+ N Y +L LHQDK+E D P+VS S+G A FL+G
Sbjct: 117 FPGFAPDACLVNQYEPGSRLSLHQDKNER----DYGAPIVSVSLGMPALFLFGGHERSDK 172
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
+V L GDV+++GG R +HGV P L + R+N T R+
Sbjct: 173 TVRVPLLHGDVVVWGGVDRLRYHGV-------MPMKDLPHPRLGSRRINFTLRK 219
>gi|422609342|ref|ZP_16681250.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial
[Pseudomonas syringae pv. japonica str. M301072]
gi|330901726|gb|EGH33145.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial
[Pseudomonas syringae pv. japonica str. M301072]
Length = 205
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++ LHQD++E D PVVS S+G A F +G L +++
Sbjct: 103 PDACLINRYIPGARMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGLLRSDKTQRIS 158
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++G + R FHG+ P E + R+NLTFR+
Sbjct: 159 LFHGDVVVWGDEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 200
>gi|399005151|ref|ZP_10707747.1| alkylated DNA repair protein [Pseudomonas sp. GM17]
gi|398127318|gb|EJM16730.1| alkylated DNA repair protein [Pseudomonas sp. GM17]
Length = 222
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+A PD C+ N Y ++ LHQDKDE D P+VS S+G A F G R
Sbjct: 115 QAGFAGFEPDACLINHYVPGARMSLHQDKDER----DYDAPIVSVSLGLPAVFQLGGERR 170
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGV----EKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+V L GDV+++GG R +HGV E P P+ R+NLTFR
Sbjct: 171 SERPLRVPLLHGDVVVWGGVDRLRYHGVLPLKEGTHPLLGPR-----------RINLTFR 219
Query: 585 Q 585
+
Sbjct: 220 R 220
>gi|58262090|ref|XP_568455.1| hypothetical protein CNM01450 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118397|ref|XP_772212.1| hypothetical protein CNBM1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254820|gb|EAL17565.1| hypothetical protein CNBM1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230628|gb|AAW46938.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 425
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKV 535
PD I NFY L H D+ E +D P+VS S+G +A L G D RD + +
Sbjct: 300 PDTGIVNFYQLNDTLMAHVDRAE----LDPARPLVSVSLGHAAILLLGSDSRDEV-PRPI 354
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS-----------MRRGRLNLTFR 584
IL SGD+LI GK R+ +HGV +I + P L + S + R+N+ R
Sbjct: 355 ILRSGDMLIMSGKGRQSYHGVPRILEGSLPSHFLVQESDSEEMKAAKNWISTARININAR 414
Query: 585 Q 585
Q
Sbjct: 415 Q 415
>gi|392952948|ref|ZP_10318502.1| N1-methyladenine/N3-methylcytosine demethylase [Hydrocarboniphaga
effusa AP103]
gi|391858463|gb|EIT68992.1| N1-methyladenine/N3-methylcytosine demethylase [Hydrocarboniphaga
effusa AP103]
Length = 216
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+S D C+ N Y +L LHQD+DE D P++S S+G A F++G K+
Sbjct: 115 LSTDACLVNRYEPGSRLTLHQDRDEH----DVQAPIISVSLGVPAIFVFGRNTRSGPTKR 170
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++GG SR +HGV+ I P + S+ R NLTFR+
Sbjct: 171 SRLVHGDVVVWGGVSRLAYHGVQPIAQAQHPAT----GSL---RYNLTFRK 214
>gi|399062675|ref|ZP_10746650.1| alkylated DNA repair protein, partial [Novosphingobium sp. AP12]
gi|398033443|gb|EJL26744.1| alkylated DNA repair protein, partial [Novosphingobium sp. AP12]
Length = 212
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+PD C+ N Y +L LHQD++E D P+VS S+G A FL+G +
Sbjct: 112 FAPDSCLMNRYEPGSRLSLHQDRNER----DFDAPIVSVSLGLPATFLWGGATRSEKPMR 167
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
V L GDV+++GG +R FHGV+ + SL E R NLTFR
Sbjct: 168 VRLFHGDVVVWGGPARLTFHGVDTM---RGSGSLEGEY-----RHNLTFR 209
>gi|398954578|ref|ZP_10676048.1| alkylated DNA repair protein [Pseudomonas sp. GM33]
gi|398152269|gb|EJM40793.1| alkylated DNA repair protein [Pseudomonas sp. GM33]
Length = 221
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDKDE + P+VS S+G A FL+G ++++
Sbjct: 122 PDSCLINRYIPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAMFLFGGFARSDKSQRIP 177
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
L GD++++GG R +HGV I P+ + R+N TFR
Sbjct: 178 LLHGDIVVWGGVDRLRYHGVLPIKDGFHPR-------LGEQRINFTFR 218
>gi|348539562|ref|XP_003457258.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Oreochromis niloticus]
Length = 378
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y + LG+H D+ E +D P++SFS G SA FL G R +++ SG
Sbjct: 203 ILNYYRSDSSLGIHVDESE----LDHTRPLLSFSFGQSAIFLLGGPRRQDPPTAMLMHSG 258
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
DV++ G SR ++H V +I P P+ L ET
Sbjct: 259 DVMVMSGPSRLLYHAVPRILP-APPERLALET 289
>gi|358055872|dbj|GAA98217.1| hypothetical protein E5Q_04900 [Mixia osmundae IAM 14324]
Length = 480
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKV 535
P I NFY A L H D+ E D P+VS S+G SA FL G + RD +
Sbjct: 309 PQTGIVNFYGARDTLTGHIDQSEP----DAVRPLVSISLGTSAVFLAGGETRDARHPLPF 364
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIF 560
+L SGD ++ G SRR+FHG+ ++
Sbjct: 365 LLRSGDAIVMSGPSRRVFHGIPRVL 389
>gi|330810289|ref|YP_004354751.1| alpha-ketoglutarate-dependent dioxygenase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327378397|gb|AEA69747.1| Alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 226
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P G P +P F +L A + +A
Sbjct: 79 ALGWTTDRSGYRYTAHDPQTGHPWPDMPAVFRELAQAAAR----------------QAHF 122
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
PD C+ N Y ++ LHQDK+E + P+VS S+G A F +G +
Sbjct: 123 EHFEPDACLINRYVPGARMSLHQDKNERSLAA----PIVSMSLGLPAVFQFGGFERSDKS 178
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++ L GD++++GG R +HGV + P+ + R+NLTFR
Sbjct: 179 LRIPLFHGDIVVWGGVDRLRYHGVLPLKEGQHPR-------LGTQRINLTFR 223
>gi|328872504|gb|EGG20871.1| alkylated DNA repair protein [Dictyostelium fasciculatum]
Length = 399
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 20/142 (14%)
Query: 435 VPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIA---NFYSATGKL 491
P I +F++ +QD L++KI+ K P I A NFYS +
Sbjct: 230 TPRIYSRDFYETFPDDLQD---LVQKIAMATK--------YDPYIAEAGTVNFYSEDSVM 278
Query: 492 GLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKVILESGDVLIFGGKSR 550
G H D +++E ++K P++S S G SA FL G + RD+A + + SGD++I GG+SR
Sbjct: 279 GGHLD--DAEEEMEK--PIISLSFGASAVFLLGAETRDIAPIP-LFIRSGDIVIMGGRSR 333
Query: 551 RIFHGVEKIFPDTAPKSLLEET 572
+HGV KI ++ L++E
Sbjct: 334 YCYHGVAKIVENSFNVDLVDEA 355
>gi|402701962|ref|ZP_10849941.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas fragi
A22]
Length = 218
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y K+ LHQDK+E S++ P+VS S+G A F +G A+++
Sbjct: 119 PDACLINCYVPGAKMSLHQDKNE--RSLEA--PIVSISLGLPAVFQFGGFERSDPAQRIS 174
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GD+ ++GG R +HGV I P P +L E R+N+T R+
Sbjct: 175 LFHGDIAVWGGVDRLRYHGVLPIQPGQHP--VLGEQ-----RINITLRK 216
>gi|409082374|gb|EKM82732.1| hypothetical protein AGABI1DRAFT_68626 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1282
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS S+G+SA FL G ++
Sbjct: 228 PDAGIVNFYQEKDTLMAHVDRSE----VCATSPLVSISLGNSAIFLIGGPTRDTEPTPIL 283
Query: 537 LESGDVLIFGGK-SRRIFHGVEKIFPDTAPKSLLEET--------------SMRRGRLNL 581
L SGDV+I G RR +HGV +I T P L E MR R+N+
Sbjct: 284 LRSGDVVIMSGPICRRAYHGVPRILEGTLPNHLCREALAGVERESWAAYEDYMRTTRINI 343
Query: 582 TFRQY 586
RQ+
Sbjct: 344 NVRQF 348
>gi|281209952|gb|EFA84120.1| alkylated DNA repair protein [Polysphondylium pallidum PN500]
Length = 780
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 480 CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKVILE 538
I NFYS +G H D +++E ++K P+VS S G +A FL G + +DVA + +
Sbjct: 264 AIVNFYSEDSVMGGHLD--DAEEEMEK--PIVSISFGSTAVFLMGAETKDVAPVP-IFIR 318
Query: 539 SGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
SGD++I GG+SR +HGV +I D+ LL+++
Sbjct: 319 SGDIVIMGGRSRYCYHGVARIVEDSFDAGLLDDS 352
>gi|375292239|ref|YP_005126778.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
INCA 402]
gi|371581910|gb|AEX45576.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
INCA 402]
Length = 185
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA-KKV 535
P++ + N+Y ++G+H D+ E + PV+S SIGD A F G V
Sbjct: 75 PEMVLVNYYPPGSRMGMHVDEFEESRA-----PVISVSIGDEALFRMGHTESRTQPWDDV 129
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L SGD+++FGG R +HGV ++ T P + + +GR+N+T RQ
Sbjct: 130 TLCSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 175
>gi|423697935|ref|ZP_17672425.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q8r1-96]
gi|388005526|gb|EIK66793.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q8r1-96]
Length = 225
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 413 CLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAEL 472
LG D +Y P G P +P F +L A + +A
Sbjct: 78 ALGWTTDRSGYRYTAHDPQTGHPWPDMPAVFRELAQAAAR----------------QAYF 121
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
PD C+ N Y ++ LHQDK+E + P+VS S+G A F +G +
Sbjct: 122 EHFEPDACLINRYVPGARMSLHQDKNERSLAA----PIVSMSLGLPAVFQFGGFERSDKS 177
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
++ L GD++++GG R +HGV + P+ + R+NLTFR
Sbjct: 178 LRIPLFHGDIVVWGGVDRLRYHGVLPLKEGQHPR-------LGTQRINLTFR 222
>gi|429335931|ref|ZP_19216543.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
CSV86]
gi|428759413|gb|EKX81714.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
CSV86]
Length = 215
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y +L LHQD++E D P+VS S+G A FL G +KV
Sbjct: 116 PDACLINSYLPGNRLTLHQDRNER----DFSQPIVSVSLGLPATFLLGGHERADRTQKVG 171
Query: 537 LESGDVLIFGGKSRRIFHGV 556
L+ GDVL++GG+ R FHG+
Sbjct: 172 LQHGDVLVWGGEDRLRFHGI 191
>gi|213402777|ref|XP_002172161.1| alkB-like protein [Schizosaccharomyces japonicus yFS275]
gi|212000208|gb|EEB05868.1| alkB-like protein [Schizosaccharomyces japonicus yFS275]
Length = 296
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ + G+ ++ T Y P PP F + +G ++ L+ K +T KD
Sbjct: 135 LRWITFGEQYNWTTRVY----PDPATAPP-----FPEKLGHLTEE---LVHK-ATEFKDW 181
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+AE I NFYS L H D E D LP++S SIG +L G
Sbjct: 182 KAE-------AAIVNFYSPRDTLSGHVDDAED----DLTLPLLSMSIGLDCIYLLGTETR 230
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL------LEETSMRRGRLNLT 582
K + L SGD +I G SR+ +H V KI P+TAP L + ++ R+N
Sbjct: 231 KDVPKAIRLHSGDAVIMTGLSRKAYHAVPKIIPNTAPSYLQLKDEAVWNQWIQTKRVNFN 290
Query: 583 FRQ 585
RQ
Sbjct: 291 IRQ 293
>gi|404400906|ref|ZP_10992490.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fuscovaginae UPB0736]
Length = 220
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 413 CLGKNW--DPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W D +Y P G P +P QL A + A
Sbjct: 69 CGAWGWTSDRHGYRYSALDPQSGLPWPAMPEVIRQLAVDAAE----------------AA 112
Query: 471 ELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVA 530
+PD C+ N Y K+ LHQD++E D PVVS S+G A FL+G
Sbjct: 113 GFENFAPDACLINRYVPGAKMSLHQDRNER----DLNAPVVSVSLGLPAMFLFGGHDRAD 168
Query: 531 NAKKVILESGDVLIFGGKSRRIFHGVEKI 559
++++ L GDV+++GG R FHG+ I
Sbjct: 169 KSQRIPLLHGDVVVWGGVDRLRFHGILPI 197
>gi|325187414|emb|CCA21952.1| alkylated DNA repair protein alkBlike protein putati [Albugo
laibachii Nc14]
Length = 376
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 22/127 (17%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I NFY+ +G H +D+ ++++D PV+S S+G S FL G +++
Sbjct: 190 PEAVIINFYTTKSSMGGH--RDDVEDTMDA--PVISMSLGSSCVFLKGGNTKEVRPLEIM 245
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFP------DTAPKSLLEETS------------MRRGR 578
L+SGDV I +SR +HGV +I P D A SLLEE S + R
Sbjct: 246 LQSGDVAILSQESRLSYHGVAQIIPTAFQIDDEAWDSLLEEESDHVQEYMTIRSLLSSYR 305
Query: 579 LNLTFRQ 585
+N+ RQ
Sbjct: 306 ININIRQ 312
>gi|405123605|gb|AFR98369.1| hypothetical protein CNAG_06143 [Cryptococcus neoformans var.
grubii H99]
Length = 425
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKV 535
PD I NFY L H D+ E +D P+VS S+G +A L G D RD + +
Sbjct: 300 PDTGIVNFYQLNDTLMAHVDRAE----LDPARPLVSVSLGHAAILLLGSDSRDEV-PRPI 354
Query: 536 ILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS-----------MRRGRLNLTFR 584
IL SGD+LI GK R+ +HG+ +I + P + S + R+N+ R
Sbjct: 355 ILRSGDMLIMSGKGRQSYHGIPRILEGSLPSHFFVQESDSEEMKAAKNWISTARININAR 414
Query: 585 Q 585
Q
Sbjct: 415 Q 415
>gi|344274080|ref|XP_003408846.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Loxodonta
africana]
Length = 389
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H DK E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYHFDSTLGIHVDKSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ PD +SL
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPDLTGESL 301
>gi|378731086|gb|EHY57545.1| alkylated DNA repair protein alkB 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 356
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 467 DIEAELPCMSPDIC----IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFL 522
DI A L + P++C I N Y+ L +H+D E D+ L VS SIG A F+
Sbjct: 221 DIGALLRGLFPEVCAQAAIVNLYTPGDTLSVHRD---VSEECDRSL--VSISIGCDAIFI 275
Query: 523 YGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL-----LEETS---- 573
G+ D + + + L SGD ++ G SR +H V KI PDT P L + E S
Sbjct: 276 AGN-EDGSRSTSLRLRSGDAILMSGSSRYAWHAVPKILPDTCPAWLKDWPDIPEGSQWRE 334
Query: 574 ----MRRGRLNLTFRQ 585
M + R+NL RQ
Sbjct: 335 WHGWMAKKRINLNVRQ 350
>gi|428178135|gb|EKX47012.1| hypothetical protein GUITHDRAFT_137971 [Guillardia theta CCMP2712]
Length = 315
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 451 IQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE-SQESIDKCLP 509
+Q+ AL++++S+ K + + P+ I N+YS + LG H D E QES P
Sbjct: 166 MQEICALVDEVSSRMKRKQ-----IVPEAVIVNYYSHSRTLGGHLDDVEPDQES-----P 215
Query: 510 VVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIF 560
++S S+G SA FL G ++L SGDV++ G+SRR +HGV +I
Sbjct: 216 IISISLGCSAVFLAGGRTKDEEPIPLLLRSGDVMVMSGESRRCYHGVPRIL 266
>gi|336367101|gb|EGN95446.1| hypothetical protein SERLA73DRAFT_162321 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379822|gb|EGO20976.1| hypothetical protein SERLADRAFT_452119 [Serpula lacrymans var.
lacrymans S7.9]
Length = 443
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 464 GRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLY 523
G D PD I NFY L H D+ E + P+VS S+G++A FL
Sbjct: 294 GDDDWRTWEETYEPDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGNAAIFLI 349
Query: 524 GDL-RDVANAKKVILESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSLLE----------- 570
G L RD A +++ SGDV+I G + RR +HGV +I +T P L
Sbjct: 350 GGLTRDTAPI-PILVRSGDVIIMSGPACRRAYHGVPRILDNTLPPHLSHIADEGGDDHED 408
Query: 571 ------ETSMRRGRLNLTFRQ 585
E MR R+N+ RQ
Sbjct: 409 GDWVEYERYMRTTRININVRQ 429
>gi|219120943|ref|XP_002185703.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582552|gb|ACI65173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 352
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DL 526
++ + PC + I NFY+ +G H +D+ + ++DK P+VS S+G A FL G +
Sbjct: 201 VDGQDPCFTASASIVNFYTPKSMMGGH--RDDLEHALDK--PIVSISLGRPAVFLLGGNT 256
Query: 527 RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDT 563
+D +++ GDV++ GG SR +HG+ ++ P T
Sbjct: 257 KDDQPVVAILVRPGDVMMMGGASRLRYHGMARLLPTT 293
>gi|170088294|ref|XP_001875370.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650570|gb|EDR14811.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 428
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS S+G++A FL G L + ++
Sbjct: 299 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGNAAIFLVGGLTRDSEPVPIL 354
Query: 537 LESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSL 568
L SGDV+I G + RR +HGV +I +T P L
Sbjct: 355 LRSGDVIIMSGPTCRRAYHGVPRILEETLPPHL 387
>gi|289672979|ref|ZP_06493869.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. syringae FF5]
gi|422668514|ref|ZP_16728370.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330980879|gb|EGH78982.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 228
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++ LHQD++E D PVVS S+G A F +G +++
Sbjct: 126 PDACLINRYIPGARMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGQLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++G + R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGDEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|342320668|gb|EGU12607.1| Hypothetical Protein RTG_01157 [Rhodotorula glutinis ATCC 204091]
Length = 418
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 443 FHQLVG--KAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDES 500
+HQ+ G I+ + ++ +D + PD I NFY L H D E
Sbjct: 260 WHQVYGSTNTIEGRESGTATMAGQMRDWRSWKDGYEPDAGIVNFYQLKDSLTSHIDLSE- 318
Query: 501 QESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIF 560
+D P+VSFS+G S+ FL G + L SGD LI G+ RR++H + ++
Sbjct: 319 ---VDAVSPLVSFSLGHSSIFLVGGTTRDVPPLPIHLRSGDGLIMSGEGRRVYHALPRVL 375
Query: 561 PDTAPKSLL 569
T P LL
Sbjct: 376 EGTLPDYLL 384
>gi|422629960|ref|ZP_16695161.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330939213|gb|EGH42618.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 230
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD C+ N Y ++ LHQD++E D PVVS S+G A F +G +++
Sbjct: 126 PDACLINRYIPGARMSLHQDRNEH----DHRWPVVSVSLGIPAIFQFGGQLRSDKTQRIS 181
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
L GDV+++G + R FHG+ P E + R+NLTFR+
Sbjct: 182 LFHGDVVVWGDEDRLRFHGI-------LPIKQAEHPQLGEQRINLTFRK 223
>gi|426200208|gb|EKV50132.1| hypothetical protein AGABI2DRAFT_183265 [Agaricus bisporus var.
bisporus H97]
Length = 1244
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS S+G+SA FL G ++
Sbjct: 225 PDAGIVNFYQEKDTLMAHVDRSE----VCATSPLVSISLGNSAIFLIGGPTRDTEPTPIL 280
Query: 537 LESGDVLIFGGK-SRRIFHGVEKIFPDTAPKSLLEET--------------SMRRGRLNL 581
L SGDV+I G RR +HGV +I T P L E MR R+N+
Sbjct: 281 LRSGDVVIMSGPICRRAYHGVPRILEGTLPNHLCREALAGVERESWAAYEDYMRTTRINI 340
Query: 582 TFRQ 585
RQ
Sbjct: 341 NVRQ 344
>gi|148223171|ref|NP_001087992.1| alkB, alkylation repair homolog 1 [Xenopus laevis]
gi|52138927|gb|AAH82669.1| LOC494680 protein [Xenopus laevis]
Length = 397
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N+Y LG+H D+ E +D P++SFS G S FL G L ++
Sbjct: 215 PEAGILNYYHLDSSLGIHVDESE----LDHQSPLLSFSFGQSCIFLLGGLNREHMPTPMM 270
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFP----DTAPKSL 568
+ SGD+++ G SR ++H V +I P DT P L
Sbjct: 271 MHSGDIMVMSGPSRLLYHAVPRILPFPGGDTLPPCL 306
>gi|94499311|ref|ZP_01305849.1| 2OG-Fe(II) oxygenase superfamily protein [Bermanella marisrubri]
gi|94428943|gb|EAT13915.1| 2OG-Fe(II) oxygenase superfamily protein [Oceanobacter sp. RED65]
Length = 212
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 71/177 (40%), Gaps = 33/177 (18%)
Query: 413 CLGKNWDPETSQYGTSR--PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEA 470
C W + S YG SR P G P +P + I T D+ A
Sbjct: 62 CGEYGWIAQPSGYGYSRNDPESGQSWPAMP------------------DTIRTISDDVIA 103
Query: 471 EL--PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
L P SPD C+ N Y +G HQDKDE+ P++S S+G A F +
Sbjct: 104 HLNLPKYSPDACLINRYDIGTSMGRHQDKDEANFD----YPIISVSLGLPAIFQVVGPKR 159
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
A + GDV I G++R +HGV + + L + R NLT R+
Sbjct: 160 QGKATYYSVSDGDVFILSGQARLYYHGVNTVKANPNQPELQQ-------RYNLTLRR 209
>gi|50555041|ref|XP_504929.1| YALI0F03003p [Yarrowia lipolytica]
gi|49650799|emb|CAG77734.1| YALI0F03003p [Yarrowia lipolytica CLIB122]
Length = 330
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 39/198 (19%)
Query: 398 QPGYRDGA-NLYLKMMCLGKNWDPETSQYGTSRP-TDGAVPPIIPVEFHQLVGKAIQDSR 455
+P RD N L+ + LG ++ T Y + P T+G P P ++L+ SR
Sbjct: 159 KPTSRDKIKNKQLRWVTLGGQYNWTTKAYPSFIPGTEGF--PYFPKNLYELL------SR 210
Query: 456 ALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDE-SQESIDKCLPVVSFS 514
L ++P+ I NFYS L HQD E SQ+ + VS S
Sbjct: 211 PLF---------------SINPEAAIINFYSPGDILSPHQDVAELSQDDL------VSVS 249
Query: 515 IGDSAEFLYGDLR------DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPK-S 567
IG A F G R +A ++L SGDV++ GGKSR +HG+ K+F +T+P +
Sbjct: 250 IGLDAIFYVGLNRYDDSENSLAPPLCLMLRSGDVIVMGGKSRHAYHGIGKVFSNTSPDLN 309
Query: 568 LLEETSMRRGRLNLTFRQ 585
+ + R+N+ RQ
Sbjct: 310 SPYQDWLDTKRVNINVRQ 327
>gi|330799708|ref|XP_003287884.1| hypothetical protein DICPUDRAFT_55106 [Dictyostelium purpureum]
gi|325082087|gb|EGC35581.1| hypothetical protein DICPUDRAFT_55106 [Dictyostelium purpureum]
Length = 328
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D + L++KI+ K + NFYS +G H D +++ ++K P++S
Sbjct: 179 DLQELVQKIAVATK-----FDPYVAEAATINFYSEDSIMGGHLDN--AEQEMEK--PIIS 229
Query: 513 FSIGDSAEFLYG-DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S G +A FL G + RD+A + ++SGD++I GG+SR +HGV KI D+ L++E
Sbjct: 230 ISFGSTAVFLMGAETRDIAPVP-LFIKSGDIVIMGGRSRYCYHGVAKIVEDSFNLDLIDE 288
>gi|395827622|ref|XP_003786998.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Otolemur
garnettii]
Length = 389
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKREEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D++I G SR + H V ++ P+ +SL
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGESL 301
>gi|392579368|gb|EIW72495.1| hypothetical protein TREMEDRAFT_26898 [Tremella mesenterica DSM
1558]
Length = 463
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E +D P+VS S+G S FL G +I
Sbjct: 297 PDTGIVNFYQLKDTLMGHVDRAE----LDPSRPLVSISLGHSTIFLLGSSTRNDQPIPLI 352
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPK--------SLLEETS---MRRGRLNLTFRQ 585
L SGD+LI G R+ +HGV +I T P SL +T+ ++ R+N+ RQ
Sbjct: 353 LRSGDILIMSGPGRKAYHGVPRIMEGTLPSYFTPSSDDSLSMKTTKEFLQTARININARQ 412
>gi|402876842|ref|XP_003902162.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Papio
anubis]
Length = 389
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N+Y LG+H D+ E +D P++SFS G SA FL G L+ +
Sbjct: 214 PEAGILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMF 269
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPD----------TAP-------KSLLEETSM----- 574
+ SGD++I G SR + H V ++ P+ AP S++E SM
Sbjct: 270 MHSGDIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQV 329
Query: 575 -----RRGRLNLTFRQ 585
+ R+N+T RQ
Sbjct: 330 CASYLKTARVNMTVRQ 345
>gi|308459852|ref|XP_003092238.1| hypothetical protein CRE_14334 [Caenorhabditis remanei]
gi|308253966|gb|EFO97918.1| hypothetical protein CRE_14334 [Caenorhabditis remanei]
Length = 349
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ LG +D T QY P +G +P E +QL G I +S L +
Sbjct: 189 LRWTTLGVEYDWNTKQY----PPNGRP---VPEELYQL-GNLISNSLKLGD--------- 231
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
M PD I N+Y L H DK E + P++S S+G SA +L G L
Sbjct: 232 ------MRPDATILNYYPPKSALSPHVDKSERSNA-----PLISMSLGQSAVYLSGALTL 280
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL----LEETSM-----RRGRL 579
+ L +GD L+ G+ R ++H + I P ++ +EE SM R+
Sbjct: 281 SEPPIPLWLRNGDFLVMHGEQRLVYHAIPCIGPKIEKQNFETNGVEEDSMIVDYLNCSRI 340
Query: 580 NLTFRQ 585
N T RQ
Sbjct: 341 NFTIRQ 346
>gi|66808825|ref|XP_638135.1| alkylated DNA repair protein [Dictyostelium discoideum AX4]
gi|74853785|sp|Q54N08.1|ALKB_DICDI RecName: Full=Alpha-ketoglutarate-dependent dioxygenase alkB;
AltName: Full=Alkylated DNA repair protein alkB
gi|60466573|gb|EAL64625.1| alkylated DNA repair protein [Dictyostelium discoideum AX4]
Length = 393
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 453 DSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
D + L++KI+ K + NFYS +G H D ++++ ++K P++S
Sbjct: 242 DLQELVQKIAIATK-----FDPYVAEAATVNFYSEDSIMGGHLD--DAEQEMEK--PIIS 292
Query: 513 FSIGDSAEFLYG-DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
S G +A FL G + RD+A + + SGD++I GG+SR +HGV KI ++ L++E
Sbjct: 293 ISFGSTAVFLMGAETRDIAPVP-LFIRSGDIVIMGGRSRYCYHGVAKIVENSFDLGLIDE 351
>gi|388544340|ref|ZP_10147628.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
M47T1]
gi|388277523|gb|EIK97097.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
M47T1]
Length = 218
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 414 LGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELP 473
LG D +Y P G P +P F +L D+ AL G D
Sbjct: 72 LGWTTDTHGYRYTPLDPRTGQPWPALPEAFQRLA----HDAAAL-----AGFADF----- 117
Query: 474 CMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAK 533
+PD C+ N Y ++ LHQD++E D P+VS S+G A F G +
Sbjct: 118 --TPDACLINRYVPGARMSLHQDRNER----DYSAPIVSVSLGLPAMFQMGGQQRSDRPV 171
Query: 534 KVILESGDVLIFGGKSRRIFHGV 556
+V L GDV+++GG R FHGV
Sbjct: 172 RVPLLHGDVMVWGGVDRLRFHGV 194
>gi|326920865|ref|XP_003206687.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Meleagris gallopavo]
Length = 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G S+ FL G L+ + + SG
Sbjct: 196 ILNYYHFDSSLGIHVDESE----LDHSHPLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 251
Query: 541 DVLIFGGKSRRIFHGVEKIFPD---TAPKSLLEET 572
D+++ G SR ++H V ++ P+ TA S L++
Sbjct: 252 DIMVMSGFSRLLYHAVPRVLPNPEGTALPSCLDQA 286
>gi|417400049|gb|JAA46996.1| Putative dna alkylation damage repair protein [Desmodus rotundus]
Length = 388
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H DK E +D P++SFS G SA FL G L+ + + SG
Sbjct: 217 ILNYYRLDSTLGIHVDKSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 272
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V K+ P ++ + L
Sbjct: 273 DIMVMSGFSRLLNHAVPKVLPRSSGEGL 300
>gi|378950223|ref|YP_005207711.1| alkB [Pseudomonas fluorescens F113]
gi|359760237|gb|AEV62316.1| AlkB [Pseudomonas fluorescens F113]
Length = 226
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
PD C+ N Y ++ LHQDK+E + P+VS S+G A F +G + +
Sbjct: 125 FEPDACLINRYVPGARMSLHQDKNERSFAA----PIVSMSLGLPAVFQFGGFERSDKSLR 180
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFR 584
+ L GD++++GG R +HGV + P+ + R+NLTFR
Sbjct: 181 IPLFHGDIVVWGGVDRLRYHGVLPLKEGQHPR-------LGAQRINLTFR 223
>gi|431839168|gb|ELK01095.1| Alkylated DNA repair protein alkB like protein 1 [Pteropus alecto]
Length = 444
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 273 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 328
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V K+ P +SL
Sbjct: 329 DIMVMSGFSRLLNHAVPKVLPSPEGESL 356
>gi|224051564|ref|XP_002200058.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Taeniopygia
guttata]
Length = 367
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G S+ FL G L+ + + SG
Sbjct: 199 ILNYYHFDSSLGIHVDESE----LDHSRPLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 254
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D+++ G SR ++H V ++ P+
Sbjct: 255 DIMVMSGFSRLLYHAVPRVLPN 276
>gi|327259296|ref|XP_003214474.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Anolis
carolinensis]
Length = 370
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P + I N+Y LG+H D+ E +D P++SFS G S+ FL G +
Sbjct: 192 FPGFQAEAGILNYYHFDSSLGIHVDESE----LDHSQPLLSFSFGQSSIFLLGGQKRDQA 247
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
+ + SGDV+I G SR ++H V ++ P+ K L
Sbjct: 248 PVAMFMHSGDVMIMSGFSRLLYHAVPRVLPNMEGKPL 284
>gi|149737558|ref|XP_001493983.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Equus
caballus]
Length = 389
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P +SL
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPSPTGESL 301
>gi|71895969|ref|NP_001026723.1| alkylated DNA repair protein alkB homolog 1 [Gallus gallus]
gi|60099019|emb|CAH65340.1| hypothetical protein RCJMB04_19i4 [Gallus gallus]
Length = 371
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G S+ FL G L+ + + SG
Sbjct: 203 ILNYYHFDSSLGIHVDESE----LDHSRPLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 258
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D+++ G SR ++H V ++ P+
Sbjct: 259 DIMVMSGFSRLLYHAVPRVLPN 280
>gi|410930518|ref|XP_003978645.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Takifugu rubripes]
Length = 373
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P SP+ I N+Y + LG+H D+ E +D P++S S G SA FL G L
Sbjct: 191 FPKFSPEAGILNYYHSDSSLGIHVDESE----LDHSHPLLSLSFGQSAIFLLGGLCRQDP 246
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPK 566
+ + SGDV++ G+SR +H V +I AP+
Sbjct: 247 PTAMYMRSGDVMVMSGQSRLRYHAVPRIL--VAPR 279
>gi|355668024|gb|AER94055.1| alkB, alkylation repair-like protein 1 [Mustela putorius furo]
Length = 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 187 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEVPTAMFMHSG 242
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V K+ P +SL
Sbjct: 243 DIMVMSGFSRLLNHAVPKVLPSPQGESL 270
>gi|378756529|gb|EHY66553.1| hypothetical protein NERG_00193 [Nematocida sp. 1 ERTm2]
Length = 369
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 460 KISTGRKDIEAELP------C--MSPDICIANFYSATGKLGLHQDKDESQESIDK----- 506
+I ++I A++P C +S DIC NF T + +Q KD +D+
Sbjct: 221 EIKAYNREIVAQIPEVIDQACKDISRDICKVNFIPETAVINYYQKKDRIMSHVDRYEEDM 280
Query: 507 CLPVVSFSIGDSAEFLYGDL-RDVANAKKVILESGDVLIFGGKSRRIFHGVEKI------ 559
P++SFS G S F+ G R+ ++ +LE GD+ I G+SR FHGV KI
Sbjct: 281 SKPLISFSFGASCVFVLGKKEREDSSVDTFLLEDGDIAILIGESREYFHGVPKILNSNKG 340
Query: 560 FPDTAPKSLLEETSMRRGRLNLTFRQ 585
D + S R+N++ RQ
Sbjct: 341 LEDYKKEEFFSLIS--ESRINISVRQ 364
>gi|405965043|gb|EKC30471.1| Alkylated DNA repair protein alkB-like protein 1 [Crassostrea
gigas]
Length = 378
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
S + I N+Y +G +G H+D E ID P++SFS G A FL G L
Sbjct: 192 FSAETAIVNYYHMSGDMGPHKDISE----IDHDAPLLSFSFGQDALFLLGGLTKATKPVC 247
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFP 561
+ L SGDV I G R ++H V +I P
Sbjct: 248 LSLHSGDVCIMYGDCRLVYHAVPRILP 274
>gi|291406697|ref|XP_002719670.1| PREDICTED: alkylated DNA repair protein alkB homolog [Oryctolagus
cuniculus]
Length = 389
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDETPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFP 561
D+++ G SR + H V ++ P
Sbjct: 274 DIMVMSGSSRLLNHAVPRVLP 294
>gi|444708830|gb|ELW49869.1| Alkylated DNA repair protein alkB like protein 1 [Tupaia chinensis]
Length = 358
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 187 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEVPTAMFMHSG 242
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P+ +SL
Sbjct: 243 DIMVMSGFSRLLNHAVPRVLPNPMGESL 270
>gi|348573447|ref|XP_003472502.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Cavia
porcellus]
Length = 389
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDETPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D+++ G SR + H V ++ P+
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPN 295
>gi|297298350|ref|XP_002805207.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Macaca
mulatta]
Length = 555
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 384 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 439
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 440 DIMIMSGFSRLLNHAVPRVLPN 461
>gi|148671002|gb|EDL02949.1| mCG17465, isoform CRA_c [Mus musculus]
Length = 255
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 31/132 (23%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 84 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 139
Query: 541 DVLIFGGKSRRIFHGVEKIFP----DTAP-------------KSLLE----------ETS 573
D+++ G SR + H V ++ P + P SL+E T
Sbjct: 140 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSVEDWQVCATY 199
Query: 574 MRRGRLNLTFRQ 585
+R R+N+T RQ
Sbjct: 200 LRTARVNMTVRQ 211
>gi|407411737|gb|EKF33680.1| alkylated DNA repair protein, putative [Trypanosoma cruzi
marinkellei]
Length = 337
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P I N++S + HQD S+ES+ P++S S+G S FL G
Sbjct: 196 PQTAIVNYFSVGSMMMAHQDV--SEESMQH--PLISISLGCSCVFLMGTSSRDDAPSAFW 251
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAP-----------KSLLEETSMRRGRLNLTFRQ 585
L SGDV IF G SR FH + +I D+ P + T MR R+N+ RQ
Sbjct: 252 LRSGDVAIFSGPSRVAFHSIPRIMDDSPPHLCTISDENNENEVYWRTRMRHMRININVRQ 311
>gi|440894743|gb|ELR47118.1| Alkylated DNA repair protein alkB-like protein 1 [Bos grunniens
mutus]
Length = 389
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDEAPTPMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P +SL
Sbjct: 274 DIMVMSGFSRLVNHAVPRVLPSPEGESL 301
>gi|359320086|ref|XP_537525.3| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Canis lupus
familiaris]
Length = 389
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P +SL
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPSPQGESL 301
>gi|47206791|emb|CAF90957.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 472 LPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
P + + I N+Y + LG+H D+ E +D P++S S G SA FL G L A
Sbjct: 196 FPTFNAEAAILNYYHSDSSLGIHVDESE----LDHSHPLLSLSFGQSAIFLLGGLCRQAP 251
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIF 560
+ + SGDV++ G+SR +H V +I
Sbjct: 252 PVAMYMHSGDVMVMSGQSRLRYHAVPRIL 280
>gi|332222939|ref|XP_003260626.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Nomascus
leucogenys]
Length = 344
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 31/132 (23%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 173 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 228
Query: 541 DVLIFGGKSRRIFHGVEKIFPD----------TAP-------KSLLEETSM--------- 574
D++I G SR + H V ++ P+ AP S++E SM
Sbjct: 229 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 288
Query: 575 -RRGRLNLTFRQ 585
+ R+N+T RQ
Sbjct: 289 LKTARVNMTVRQ 300
>gi|1237210|emb|CAA63047.1| alkB homolog protein [Homo sapiens]
gi|1588535|prf||2208455A ABH gene
Length = 299
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 143 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPPPMFMHSG 198
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 199 DIMIMSGFSRLLNHAVPRVLPN 220
>gi|355693477|gb|EHH28080.1| hypothetical protein EGK_18423 [Macaca mulatta]
gi|355778768|gb|EHH63804.1| hypothetical protein EGM_16845 [Macaca fascicularis]
gi|383422509|gb|AFH34468.1| alkylated DNA repair protein alkB homolog 1 [Macaca mulatta]
Length = 389
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 31/132 (23%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD----------TAP-------KSLLEETSM--------- 574
D++I G SR + H V ++ P+ AP S++E SM
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 333
Query: 575 -RRGRLNLTFRQ 585
+ R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|156523266|ref|NP_001096035.1| alkylated DNA repair protein alkB homolog 1 [Mus musculus]
gi|261263115|sp|P0CB42.1|ALKB1_MOUSE RecName: Full=Alkylated DNA repair protein alkB homolog 1; AltName:
Full=Alpha-ketoglutarate-dependent dioxygenase ABH1;
AltName: Full=DNA lyase ABH1; AltName: Full=DNA
oxidative demethylase ALKBH1
Length = 389
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 31/132 (23%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFP----DTAP-------------KSLLE----------ETS 573
D+++ G SR + H V ++ P + P SL+E T
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSVEDWQVCATY 333
Query: 574 MRRGRLNLTFRQ 585
+R R+N+T RQ
Sbjct: 334 LRTARVNMTVRQ 345
>gi|212533101|ref|XP_002146707.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Talaromyces marneffei
ATCC 18224]
gi|210072071|gb|EEA26160.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Talaromyces marneffei
ATCC 18224]
Length = 349
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+ A P I NFYSA L +H+D E ++ ++S S G A F+
Sbjct: 218 LRAAFPETDAQAAIVNFYSANDTLSMHRDVSEQCDT-----GLISVSFGCDALFMIS--H 270
Query: 528 DVANAKKVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE---------ETSMRRG 577
D + +VI L SGD + G SR +HGV KI P+T P L + + M R
Sbjct: 271 DAGDGCEVIRLRSGDAVYMSGPSRFAWHGVPKIIPETCPDWLRDWPGSNYPYWQGWMGRK 330
Query: 578 RLNLTFRQ 585
R+NL RQ
Sbjct: 331 RVNLNVRQ 338
>gi|123994055|gb|ABM84629.1| alkB, alkylation repair homolog 1 (E. coli) [synthetic construct]
Length = 389
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEALTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|297695621|ref|XP_002825034.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Pongo
abelii]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 31/132 (23%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD----------TAP-------KSLLEETSM--------- 574
D++I G SR + H V ++ P+ AP S++E SM
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 333
Query: 575 -RRGRLNLTFRQ 585
+ R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|395503799|ref|XP_003756249.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Sarcophilus
harrisii]
Length = 377
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+ G +D +AE I N+Y LG+H D+ E +D P++SFS G SA F
Sbjct: 199 ACGFQDFQAE-------AGILNYYRLDSTLGIHVDRSE----LDHTKPLLSFSFGQSAIF 247
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
L G L+ + + SGD+++ G SR + H V ++ P+ SL
Sbjct: 248 LLGGLKRDEVPTAMFMHSGDIMVMSGFSRLLNHAVPRVLPNFDGTSL 294
>gi|380795791|gb|AFE69771.1| alkylated DNA repair protein alkB homolog 1, partial [Macaca
mulatta]
Length = 371
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 31/132 (23%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 200 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 255
Query: 541 DVLIFGGKSRRIFHGVEKIFPD----------TAP-------KSLLEETSM--------- 574
D++I G SR + H V ++ P+ AP S++E SM
Sbjct: 256 DIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 315
Query: 575 -RRGRLNLTFRQ 585
+ R+N+T RQ
Sbjct: 316 LKTARVNMTVRQ 327
>gi|296215619|ref|XP_002754205.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Callithrix
jacchus]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|241608428|ref|XP_002405982.1| conserved hypothetical protein [Ixodes scapularis]
gi|215500738|gb|EEC10232.1| conserved hypothetical protein [Ixodes scapularis]
Length = 287
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 458 IEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGD 517
+ +++TG + A P+ I N+Y+ LG H D S+ ++D PVVS S G
Sbjct: 152 LRELATGLARL-AGFSAFQPEAAIVNYYAMDSALGGHVDN--SELALDA--PVVSASFGQ 206
Query: 518 SAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFP 561
+A FL G + ++L SGDVL+ G +R +H V ++ P
Sbjct: 207 TAVFLVGGATRERRPRALLLRSGDVLVMSGPARLAYHAVPRVLP 250
>gi|60810576|gb|AAX36149.1| alkB, alkylation repair-like [synthetic construct]
Length = 390
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|426234305|ref|XP_004011136.1| PREDICTED: LOW QUALITY PROTEIN: alkylated DNA repair protein alkB
homolog 1 [Ovis aries]
Length = 386
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 215 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDEAPTPMFMHSG 270
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P +SL
Sbjct: 271 DIMVMSGFSRLLNHAVPRVLPSPEGESL 298
>gi|61364608|gb|AAX42572.1| alkB alkylation repair-like [synthetic construct]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|154292616|ref|XP_001546879.1| hypothetical protein BC1G_14634 [Botryotinia fuckeliana B05.10]
Length = 351
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DL 526
+E P M P I NFYS L LH+D ES+D+ L VS S+G F+ D
Sbjct: 221 VEGLFPDMEPQAAIVNFYSPKDTLQLHRD---GAESVDRGL--VSISLGCDCIFMIALDN 275
Query: 527 RDVANAKKVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE-ETSMRR-------G 577
N V+ L SGDVL SR +HGV KI P T P L + E +++
Sbjct: 276 PKSENDHLVLRLRSGDVLYMQEDSRFAWHGVPKIIPGTCPDYLADLELDIKKFPHFMTDK 335
Query: 578 RLNLTFRQ 585
R+NL RQ
Sbjct: 336 RINLNVRQ 343
>gi|392595675|gb|EIW84998.1| hypothetical protein CONPUDRAFT_117367 [Coniophora puteana
RWD-64-598 SS2]
Length = 425
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS SIG++A FL G ++
Sbjct: 281 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISIGNAAIFLIGGQTRDEPPVPIL 336
Query: 537 LESGDVLIFGGK-SRRIFHGVEKIFPDTAPKSLLE 570
L SGDV++ G RR +HGV +I ++ P+ L++
Sbjct: 337 LHSGDVVMMAGPYCRRAYHGVPRILANSLPRHLVD 371
>gi|19343600|gb|AAH25787.1| AlkB, alkylation repair homolog 1 (E. coli) [Homo sapiens]
gi|124126775|gb|ABM92160.1| alkB, alkylation repair homolog 1 (E. coli) [synthetic construct]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|453089301|gb|EMF17341.1| hypothetical protein SEPMUDRAFT_130108 [Mycosphaerella populorum
SO2202]
Length = 341
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
IE+ P M+ + I N YS L LH+D E + P+VS SIG SA F+ G L
Sbjct: 216 IESVFP-MNAEAAILNLYSPGDTLSLHRDVSEECDQ-----PLVSISIGCSAVFIVG-LE 268
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL--------LEETSMRRG-- 577
D A ++L SGD ++ G SR +HGV K+ +T P + + RG
Sbjct: 269 DHEPAA-ILLRSGDAVLMSGASRYAWHGVPKVLRETCPAGIAGWPATENTPQYEQWRGWM 327
Query: 578 ---RLNLTFRQ 585
R+NL RQ
Sbjct: 328 AGKRINLNVRQ 338
>gi|291001401|ref|XP_002683267.1| predicted protein [Naegleria gruberi]
gi|284096896|gb|EFC50523.1| predicted protein [Naegleria gruberi]
Length = 294
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 39/211 (18%)
Query: 401 YRDGANLYLKMM--CLGKNWDPETSQYGTSRPTDGAV--PPIIPVEFHQ--------LVG 448
+R+ NL ++ CL E GT PTD + + F Q + G
Sbjct: 81 FRNHPNLQQDLINYCLSALRGNEEGITGTEFPTDETTFQKCFLDIPFEQFNSKFADIICG 140
Query: 449 KAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD-----ESQES 503
A++ ++ + + + D C +Y+ GKLG H+D+ E Q
Sbjct: 141 AAMKVAKEHCKILQDYQDDFRIAQLC---------YYTNKGKLGWHRDRISGLTPEEQHL 191
Query: 504 IDKCLPVVSFSIGDSAEFLY---------GDLRDVANAKKVILESGDVLIFGGKSRRIFH 554
I PVVS S+G+ + F Y G L A + L+SGD+LIFG R +H
Sbjct: 192 I--VSPVVSMSLGNDSIFSYKLNTINETTGKLEYGTEAIDLQLKSGDILIFGATQRMFYH 249
Query: 555 GVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
V++I P T L + GR+N+T R+
Sbjct: 250 CVKRIIPSTNHHKL--DMDGLSGRINITLRE 278
>gi|347833688|emb|CCD49385.1| hypothetical protein [Botryotinia fuckeliana]
Length = 358
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DL 526
+E P M P I NFYS L LH+D ES+D+ L VS S+G F+ D
Sbjct: 228 VEGLFPDMEPQAAIVNFYSPKDTLQLHRD---GAESVDRGL--VSISLGCDCIFMIALDN 282
Query: 527 RDVANAKKVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE-ETSMRR-------G 577
N V+ L SGDVL SR +HGV KI P T P L + E +++
Sbjct: 283 PKSENDHLVLRLRSGDVLYMQEDSRFAWHGVPKIIPGTCPDYLADLELDIKKFPHFMTDK 342
Query: 578 RLNLTFRQ 585
R+NL RQ
Sbjct: 343 RINLNVRQ 350
>gi|149025282|gb|EDL81649.1| alkB, alkylation repair homolog (E. coli) (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 255
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 84 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 139
Query: 541 DVLIFGGKSRRIFHGVEKIFP 561
D+++ G SR + H V ++ P
Sbjct: 140 DIMVMSGFSRLLNHAVPRVLP 160
>gi|403264787|ref|XP_003924654.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Saimiri
boliviensis boliviensis]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYHLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|397474972|ref|XP_003808929.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Pan
paniscus]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|114654177|ref|XP_510096.2| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Pan
troglodytes]
gi|410208596|gb|JAA01517.1| alkB, alkylation repair homolog 1 [Pan troglodytes]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|87298840|ref|NP_006011.2| alkylated DNA repair protein alkB homolog 1 [Homo sapiens]
gi|12643239|sp|Q13686.2|ALKB1_HUMAN RecName: Full=Alkylated DNA repair protein alkB homolog 1; AltName:
Full=Alpha-ketoglutarate-dependent dioxygenase ABH1;
AltName: Full=DNA lyase ABH1; AltName: Full=DNA
oxidative demethylase ALKBH1
gi|6015189|gb|AAF01478.1|AC008044_1 ABH [Homo sapiens]
gi|119601706|gb|EAW81300.1| alkB, alkylation repair homolog 1 (E. coli), isoform CRA_a [Homo
sapiens]
Length = 389
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|426377631|ref|XP_004055565.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Gorilla
gorilla gorilla]
Length = 389
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPN 295
>gi|52632413|gb|AAH15024.1| ALKBH1 protein [Homo sapiens]
Length = 380
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 209 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 264
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D++I G SR + H V ++ P+
Sbjct: 265 DIMIMSGFSRLLNHAVPRVLPN 286
>gi|410962725|ref|XP_003987919.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Felis
catus]
Length = 389
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P + + L
Sbjct: 274 DIMVMSGFSRLLSHAVPRVLPSSQGEGL 301
>gi|390598656|gb|EIN08054.1| hypothetical protein PUNSTDRAFT_144502 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 440
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E + P+VS S+G +A FL G ++
Sbjct: 294 PDAGIVNFYQTNDTLMAHVDRSE----VCATSPLVSISLGCAAIFLIGSATRDDPPTPIL 349
Query: 537 LESGDVLIFGG-KSRRIFHGVEKIFPDTAPKSLLEETS--------------MRRGRLNL 581
L SGDV+I G + RR +HGV +I + P L T+ +R R+N+
Sbjct: 350 LRSGDVVIMSGPRCRRAYHGVPRILDASLPAHLSAPTASENEDEEWLPYARYLRTTRINV 409
Query: 582 TFRQ 585
RQ
Sbjct: 410 NVRQ 413
>gi|149633200|ref|XP_001505295.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Ornithorhynchus anatinus]
Length = 370
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+ G +D AE I N+Y LG+H D+ E +D P++SFS G SA F
Sbjct: 187 ACGFRDFRAE-------AGILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIF 235
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPD 562
L G L+ + + SGD+++ G SR + H V ++ P+
Sbjct: 236 LLGGLKRDEAPTAMFVHSGDIMVMSGFSRLLNHAVPRVLPN 276
>gi|126282539|ref|XP_001373939.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Monodelphis domestica]
Length = 377
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 211 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEVPTAMFMHSG 266
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P+ SL
Sbjct: 267 DIMVMSGFSRLLNHAVPRVLPNFDGTSL 294
>gi|301781971|ref|XP_002926396.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Ailuropoda melanoleuca]
gi|281354468|gb|EFB30052.1| hypothetical protein PANDA_016045 [Ailuropoda melanoleuca]
Length = 389
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D+++ G SR + H V ++ P SL
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPSPQGDSL 301
>gi|344249815|gb|EGW05919.1| Alkylated DNA repair protein alkB-like 1 [Cricetulus griseus]
Length = 258
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 84 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 139
Query: 541 DVLIFGGKSRRIFHGVEKIFP 561
D+++ G SR + H V ++ P
Sbjct: 140 DIMVMSGFSRLLNHAVPRVLP 160
>gi|440798016|gb|ELR19090.1| alkylated DNA repair protein AlkB [Acanthamoeba castellanii str.
Neff]
Length = 279
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y+ L H D E + P+VS S+G SA FL G + ++L SG
Sbjct: 144 IVNYYAPETVLCGHLDDVE----LTFEAPIVSISLGLSAIFLLGGRTREEKPRAMLLRSG 199
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
DV++ GG SR ++HGV +I P T P L
Sbjct: 200 DVVVMGGASRLLYHGVPRILPATLPPEL 227
>gi|449435087|ref|XP_004135327.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Cucumis sativus]
gi|449529170|ref|XP_004171574.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Cucumis sativus]
Length = 363
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ LG +D Y S P + IP QL R + TG +
Sbjct: 195 LRWSTLGLQFDWSKRSYNISLPHNK-----IPSALCQLA------KRMAAAAMPTGEE-- 241
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
P+ I N++++ LG H D E+ D P+VS S+G A FL G
Sbjct: 242 ------FKPEAAIVNYFASGDTLGGHLDDMEA----DWSKPIVSMSLGCKAIFLLGGKSR 291
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPK--SLLEE-----------TSMR 575
+ L SGDV++ G++R FHGV +IF D + S LE +R
Sbjct: 292 QDPPIAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLETHLTNQDDLHCLEYIR 351
Query: 576 RGRLNLTFRQ 585
R+N+ RQ
Sbjct: 352 TSRININIRQ 361
>gi|351698328|gb|EHB01247.1| Alkylated DNA repair protein alkB-like protein 1 [Heterocephalus
glaber]
Length = 389
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G ++ + + SG
Sbjct: 218 ILNYYYLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGIKRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D+++ G SR + H V +I P+
Sbjct: 274 DIMVMSGFSRLLNHAVPRILPN 295
>gi|268580271|ref|XP_002645118.1| Hypothetical protein CBG16811 [Caenorhabditis briggsae]
Length = 313
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ LG +D T +Y P +G +P E QL G I +S L +
Sbjct: 155 LRWTTLGVEYDWNTKKY----PENGRP---VPDELFQL-GNLISNSLKLGD--------- 197
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
M PD I N+Y L H DK E + P++S S+G +A +L G L
Sbjct: 198 ------MRPDATILNYYPPKSALSPHVDKSERSNA-----PLISMSLGQTAVYLSGALSL 246
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAP-------KSLLEETSMRRGRLNL 581
+ L +GD LI G+ R ++H + I P P +S + + R+N
Sbjct: 247 SEPPIPLWLSNGDFLIMHGEQRLVYHAIPCIGPKVKPVHFDKDEQSPMISDYLNCSRINF 306
Query: 582 TFRQ 585
T RQ
Sbjct: 307 TIRQ 310
>gi|354474981|ref|XP_003499708.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 isoform 2
[Cricetulus griseus]
Length = 391
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 220 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 275
Query: 541 DVLIFGGKSRRIFHGVEKIFP 561
D+++ G SR + H V ++ P
Sbjct: 276 DIMVMSGFSRLLNHAVPRVLP 296
>gi|421744559|ref|ZP_16182534.1| alkylated DNA repair protein [Streptomyces sp. SM8]
gi|406687053|gb|EKC91099.1| alkylated DNA repair protein [Streptomyces sp. SM8]
Length = 158
Score = 58.9 bits (141), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 369 YIEAWYGITEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTS 428
++ W + ++V+ CR GP + G + ++ + LG +W P +Y T
Sbjct: 18 HVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSP--YRY-TR 74
Query: 429 RPTDGAVPPIIPVE--FHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYS 486
R D P+ P+ +L +A+ D+ + + GR PD+ + NFY
Sbjct: 75 RAGDVNGAPVAPLPEWLVELGRRAVADA---YQDEAAGR--------AYRPDVALVNFYG 123
Query: 487 ATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD 525
A +G+HQDKDE ++ PVVS S+GD+ F G+
Sbjct: 124 AGATMGMHQDKDERSDA-----PVVSLSVGDACLFRLGN 157
>gi|354474979|ref|XP_003499707.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 isoform 1
[Cricetulus griseus]
Length = 389
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G SA FL G L+ + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 541 DVLIFGGKSRRIFHGVEKIFP 561
D+++ G SR + H V ++ P
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLP 294
>gi|449274830|gb|EMC83908.1| Alkylated DNA repair protein alkB like protein 1, partial [Columba
livia]
Length = 327
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y LG+H D+ E +D P++SFS G S+ FL G + + + SG
Sbjct: 158 ILNYYHFDSSLGIHVDESE----LDHSRPLLSFSFGQSSIFLLGGRKREEAPTAMFMHSG 213
Query: 541 DVLIFGGKSRRIFHGVEKIFPD 562
D+++ G SR ++H V ++ P+
Sbjct: 214 DIMVMSGFSRLLYHAVPRVLPN 235
>gi|357462995|ref|XP_003601779.1| Alkylated DNA repair protein alkB-like protein [Medicago
truncatula]
gi|355490827|gb|AES72030.1| Alkylated DNA repair protein alkB-like protein [Medicago
truncatula]
Length = 359
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 44/226 (19%)
Query: 339 KGTVMLNPSLLVTNRQKRNDLKLSIGAKSNYIEAWYGITEEVKIVKICRDLGLGPGGFYQ 398
+G V++ LVT+ + DL G E W TE+ ++ CR +
Sbjct: 138 EGKVLVEEKSLVTSNEPNTDLSCRDG------EKWKFTTEKEASLRKCRSVS-------- 183
Query: 399 PGYRDGANLY--LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRA 456
G++L L+ LG +D Y S +P + QL A+ A
Sbjct: 184 -----GSSLLRKLRWSTLGLQFDWSNRNYNVSL-QHNKIPEALCELAKQLAKPAMP---A 234
Query: 457 LIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIG 516
+E P+ I N++++ LG H D E+ D P+VS S+G
Sbjct: 235 GVE---------------FHPEAAIVNYFASGDTLGGHLDDMEA----DWSKPIVSLSLG 275
Query: 517 DSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPD 562
A FL G + L SGDV++ G++R FHGV +IF D
Sbjct: 276 CKAIFLLGGKSREDAPLAMFLRSGDVVLMAGEARECFHGVPRIFAD 321
>gi|71419500|ref|XP_811187.1| alkylated DNA repair protein [Trypanosoma cruzi strain CL Brener]
gi|70875822|gb|EAN89336.1| alkylated DNA repair protein, putative [Trypanosoma cruzi]
Length = 323
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 30/189 (15%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
++ LG ++D + Y +R A PP + +++ + + D+
Sbjct: 141 MRWATLGFSYDWTSKTY--TRENYSAFPPALKRRIEEIL------------HLCSSTPDL 186
Query: 469 EAELPCM-SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
+ P + P I N++S + HQD S+ES+ P++S S+G S FL G
Sbjct: 187 KDVNPSIYEPQTAIVNYFSVGSMMMAHQDV--SEESMQH--PLISISLGCSCVFLMGTSS 242
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPK-----------SLLEETSMRR 576
L SGDV +F G SR FH + +I D P + T MR
Sbjct: 243 RDDAPYAFWLRSGDVAVFSGPSRVAFHSIPRIMDDCPPHLCTISGENNEDEVYWRTQMRH 302
Query: 577 GRLNLTFRQ 585
R+N+ RQ
Sbjct: 303 MRININVRQ 311
>gi|299753503|ref|XP_002911877.1| hypothetical protein CC1G_13917 [Coprinopsis cinerea okayama7#130]
gi|298410330|gb|EFI28383.1| hypothetical protein CC1G_13917 [Coprinopsis cinerea okayama7#130]
Length = 518
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 392 GPGGFYQPGYRDGANLYLKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAI 451
P QP L+ +G + T QY S+ I E H + KA+
Sbjct: 199 APSATVQPASASSLLYKLRWANIGWYYHWGTKQYDFSQGKGD-----IDEELHDICRKAV 253
Query: 452 Q--DSRALIEKISTGRKDIEAELP----------CMSPDICIANFYSATGKLGLHQDKDE 499
D + + E +E E P PD I NFY L H D+ E
Sbjct: 254 HSVDWKEVYEGTQ-----LEWEQPEDPEWKYWRDTYEPDAGIVNFYQTKDTLMAHVDRSE 308
Query: 500 SQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGK-SRRIFHGVEK 558
+ P+VS S+G+++ FL G + ++L SGDV+I G +RR +HGV +
Sbjct: 309 ----VCATSPLVSISLGNASVFLIGGNTRESEPIPLLLRSGDVVIMSGPVARRAYHGVPR 364
Query: 559 IFPDTAPKSLLEETS--------MRRGRLNLTFRQ 585
I +T P L ++ M+ R+N+ R+
Sbjct: 365 ILEETLPPHLQGDSDDWRPFARYMKTTRINVNERK 399
>gi|425472313|ref|ZP_18851164.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Microcystis
aeruginosa PCC 9701]
gi|389881640|emb|CCI37830.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Microcystis
aeruginosa PCC 9701]
Length = 193
Score = 58.5 bits (140), Expect = 9e-06, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 47/218 (21%)
Query: 377 TEEVKIVKICRDLGLGPGGFYQPGYRDGANLYLKMMCLGKN-WDPETSQYG-------TS 428
T + +++ + L L + P + GA + +M C G+ W +T Y T
Sbjct: 12 TAQHTLIREIQTLVLPESPLFTPTMKSGAKFHYQMTCCGETGWISDTLGYRYTTLHPITG 71
Query: 429 RPTDGAVPPIIP-VEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSA 487
+P P ++ +++ +L G + +A C+ N Y
Sbjct: 72 KPWASLTPSLLTLIDYLKLQGYIPANYQA---------------------QTCLINKYLP 110
Query: 488 TGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGG 547
KLGLHQD E + P++S S+G S F G L +++ L+ GD+ I G
Sbjct: 111 GNKLGLHQDNSERNLTA----PIISISLGASGIFQLGGLNRHDPIEEITLQPGDIFIMGE 166
Query: 548 KSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 585
R FHG + I + R+NLT RQ
Sbjct: 167 DDRLRFHGFKGILNG-------------KKRVNLTIRQ 191
>gi|350396077|ref|XP_003484433.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Bombus
impatiens]
Length = 308
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 30/143 (20%)
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+ G KD +AE I N+Y L H D E ++ P+ S S G +A F
Sbjct: 167 TLGFKDFKAE-------AAIINYYRMNSTLAGHTDHSE----VNVEAPLFSISFGQTAIF 215
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDT-APKSLLE---------- 570
L G L A + L SGD+++ GKSR +HGV KI P AP +E
Sbjct: 216 LIGGLTQEDAANAMFLRSGDIIVMSGKSRLRYHGVPKILPTIDAPWGDIEMNDNNQHCTW 275
Query: 571 --------ETSMRRGRLNLTFRQ 585
+T + R+N+ RQ
Sbjct: 276 NESDWIKAKTYISEARINMNVRQ 298
>gi|407919566|gb|EKG12796.1| hypothetical protein MPH_10039 [Macrophomina phaseolina MS6]
Length = 350
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 61/150 (40%), Gaps = 37/150 (24%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG--- 524
+ P M P I NFYS L +H+D E D+ L VS SIG F+ G
Sbjct: 203 LHGVFPDMEPQAAIVNFYSPGDTLSMHRD---VSEGCDRGL--VSISIGCDGIFVIGRKE 257
Query: 525 --------DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL-------- 568
DL ++ + L SGD + G SR +HGV +I PDT P+ L
Sbjct: 258 PRIGSSADDLEKDSDILTIRLRSGDAVYMSGPSRFAWHGVPQIVPDTCPEWLENWPAPST 317
Query: 569 -----------LEETS--MRRGRLNLTFRQ 585
EE MR R+NL RQ
Sbjct: 318 DGLEGGDHEGVYEEWKGWMRAKRINLNVRQ 347
>gi|115681547|ref|XP_785154.2| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Strongylocentrotus purpuratus]
Length = 488
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 473 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANA 532
P I NFY LG H D E D P++S+S+G SA L G
Sbjct: 193 PRFQSQAAIVNFYHMDSTLGGHTDHSE----FDLTAPLISYSLGQSAILLVGGKTKATKP 248
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIF 560
+ L SGDV+I GG+SR +H V KI
Sbjct: 249 LALHLRSGDVIILGGESRLAYHAVPKIM 276
>gi|393905643|gb|EFO18292.2| ALKBH protein [Loa loa]
Length = 393
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG--DLRDVANA 532
M D I NFYS L H D+ E + P++S S G +A +L G DL D +A
Sbjct: 274 MYADAAIINFYSRKSTLAPHVDRSERK----LVSPLISLSFGQTAIYLAGGNDLDDPVDA 329
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDT------APKSLLEETSMRRGRLNLTFRQ 585
+ SGDVLI G R I+H V +I D P+ +++ + + R+N+T RQ
Sbjct: 330 --FYIRSGDVLIVYGSQRLIYHAVPRILQDKQFEDKDQPEEIVKYAN--KNRVNITLRQ 384
>gi|449543462|gb|EMD34438.1| hypothetical protein CERSUDRAFT_67441 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQL---VGKAIQDSRALI-----EK 460
L+ +G ++ T QY S+ +I E QL V ++++ R L E+
Sbjct: 237 LRWANIGWSYHWGTKQYDFSKGKG-----VIQNEVRQLCKNVVRSVRWERVLSDQCNHEE 291
Query: 461 ISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAE 520
D E PD I NFY L H D+ E I P+VS S+G +A
Sbjct: 292 WGEDGPDWETWDESYEPDAGIVNFYQTRDTLMAHVDRSE----ICATSPLVSISLGCAAI 347
Query: 521 FLYGDLRDVANAKKVILESGDVLIFGGKS-RRIFHGVEKIFPDTAP 565
FL G L + L SGD+++ G + RR +HGV +I +T P
Sbjct: 348 FLIGGLTRDEAPYPIFLRSGDIVVMSGPACRRAYHGVPRILENTLP 393
>gi|260837071|ref|XP_002613529.1| hypothetical protein BRAFLDRAFT_119815 [Branchiostoma floridae]
gi|229298914|gb|EEN69538.1| hypothetical protein BRAFLDRAFT_119815 [Branchiostoma floridae]
Length = 365
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 78/205 (38%), Gaps = 55/205 (26%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ LG ++D + +Y R T+ P + QL Q + G
Sbjct: 158 LRWTTLGYHYDWDKKEYQQERYTE------FPPDLSQLSTHVAQ---------TLG---- 198
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
P I N+Y +LG H D E +D P++SFS G +A FL G
Sbjct: 199 ---FPRYRAQSAIVNYYGLDSQLGGHVDHQE----LDYSKPIISFSFGQTAVFLLGGKTK 251
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKI--------------------------FPD 562
+ L +GD+++ G +R +HGV KI P
Sbjct: 252 SVKPMAMFLRNGDIMVMSGDTRLAYHGVPKILKPPIAELLPEGLCEGDREGELHESMLPS 311
Query: 563 TAPKSLLEETS--MRRGRLNLTFRQ 585
T KS EET+ M R+N+T RQ
Sbjct: 312 TVEKS-WEETALFMEECRINITVRQ 335
>gi|118346635|ref|XP_977046.1| hypothetical protein TTHERM_00035460 [Tetrahymena thermophila]
gi|89288563|gb|EAR86551.1| hypothetical protein TTHERM_00035460 [Tetrahymena thermophila
SB210]
Length = 403
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N+Y + H D E D+ P+ SF+ G S FL GD +
Sbjct: 242 PEAVIVNYYDKKNYMSGHLDDGEK----DQKSPIFSFTFGCSCIFLMGDRTKDFTPLPLR 297
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
L++GD++I G SR +HGV +IFP + PK E+
Sbjct: 298 LDAGDLMIMSGYSRNCYHGVPRIFPGSFPKEEFEK 332
>gi|313222823|emb|CBY41773.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 45/195 (23%)
Query: 409 LKMMCLG--KNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRK 466
L+ LG NWD + +YG+ + G VP ++ Q + K+ Q +
Sbjct: 79 LRWTTLGYHHNWD--SREYGSEVGSRGTVPELLKT-LAQEISKSFQIT------------ 123
Query: 467 DIEAELPCMSPDICIANFYSA-TGKLGLHQDKDESQESIDKCL-PVVSFSIGDSAEFLYG 524
P ++ + I N+Y A G +G+H D E C P+VS S+G A FL G
Sbjct: 124 ------PVLNAEASICNYYPANIGTIGIHSDDSEY------CYHPIVSVSLGLPAVFLLG 171
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIF--------------PDTAPKSLLE 570
+++LE GD+ I GK R+ H V ++ TA + +
Sbjct: 172 QGTRDDPCHEILLEHGDIFIMDGKDRQALHAVPRVLDLDRALKIDENYEKKITAVEDKIV 231
Query: 571 ETSMRRGRLNLTFRQ 585
+++ R+NL RQ
Sbjct: 232 YEYLKQSRINLNIRQ 246
>gi|312088227|ref|XP_003145778.1| ALKBH protein [Loa loa]
Length = 360
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG--DLRDVANA 532
M D I NFYS L H D+ E + P++S S G +A +L G DL D +A
Sbjct: 241 MYADAAIINFYSRKSTLAPHVDRSERK----LVSPLISLSFGQTAIYLAGGNDLDDPVDA 296
Query: 533 KKVILESGDVLIFGGKSRRIFHGVEKIFPDT------APKSLLEETSMRRGRLNLTFRQ 585
+ SGDVLI G R I+H V +I D P+ +++ + + R+N+T RQ
Sbjct: 297 --FYIRSGDVLIVYGSQRLIYHAVPRILQDKQFEDKDQPEEIVKYAN--KNRVNITLRQ 351
>gi|340718978|ref|XP_003397936.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Bombus
terrestris]
Length = 308
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 462 STGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEF 521
+ G KD +AE I N+Y L H D E ++ P+ S S G +A F
Sbjct: 167 TLGFKDFKAE-------AAIINYYRMNSTLAGHTDHSE----VNVEAPLFSISFGQTAIF 215
Query: 522 LYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFP 561
L G L A + L SGD+++ GKSR +HGV KI P
Sbjct: 216 LIGGLTQEDAANAMFLRSGDIIVMSGKSRLRYHGVPKILP 255
>gi|357160280|ref|XP_003578714.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
isoform 1 [Brachypodium distachyon]
Length = 369
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAK 533
+ + I N+Y + LG H D E+ D P+VS S+G FL G RD A +
Sbjct: 248 FNAEAAIVNYYGPSDMLGGHVDDMEA----DWTKPIVSISLGCKCIFLLGGKTRDEA-PR 302
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS-------------MRRGRLN 580
+ L SGD+++ G++R FHGV +IF ++ + +L S +R R+N
Sbjct: 303 AMFLRSGDIVLMAGEARERFHGVPRIFTESDQQEILAVVSQLSGDDDRFISDYIRNSRIN 362
Query: 581 LTFRQ 585
+ RQ
Sbjct: 363 INIRQ 367
>gi|348690292|gb|EGZ30106.1| hypothetical protein PHYSODRAFT_470275 [Phytophthora sojae]
Length = 309
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+S + I NFY + +G H D + + ++D PVVS S+G FL G +
Sbjct: 176 LSAEAVIVNFYKSKSSMGGHLD--DVEYTMDH--PVVSLSLGSRCVFLMGGHTKDELPLE 231
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFP 561
++L SGD+ I GG+SR +HGV ++ P
Sbjct: 232 ILLRSGDIAIMGGESRTCYHGVARVLP 258
>gi|357160283|ref|XP_003578715.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
isoform 2 [Brachypodium distachyon]
Length = 363
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAK 533
+ + I N+Y + LG H D E+ D P+VS S+G FL G RD A +
Sbjct: 242 FNAEAAIVNYYGPSDMLGGHVDDMEA----DWTKPIVSISLGCKCIFLLGGKTRDEA-PR 296
Query: 534 KVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS-------------MRRGRLN 580
+ L SGD+++ G++R FHGV +IF ++ + +L S +R R+N
Sbjct: 297 AMFLRSGDIVLMAGEARERFHGVPRIFTESDQQEILAVVSQLSGDDDRFISDYIRNSRIN 356
Query: 581 LTFRQ 585
+ RQ
Sbjct: 357 INIRQ 361
>gi|393220426|gb|EJD05912.1| hypothetical protein FOMMEDRAFT_145266 [Fomitiporia mediterranea
MF3/22]
Length = 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 467 DIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDL 526
D E+ PD I NFY L H D+ E + P+VS S+G++A FL G
Sbjct: 284 DWESWDMTYEPDAGIVNFYQYKDTLMGHVDRAE----VCATSPLVSLSLGNAAVFLIGGP 339
Query: 527 RDVANAKKVILESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSL 568
++L SGD ++ G + RR++HGV ++ T P+ L
Sbjct: 340 TRDQEPVAILLRSGDAIVMAGPACRRVYHGVPRVLEGTLPERL 382
>gi|403171030|ref|XP_003330281.2| hypothetical protein PGTG_11618 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169003|gb|EFP85862.2| hypothetical protein PGTG_11618 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 505
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ + NFY L H D E + P+VS S+G + FL R+ +
Sbjct: 387 PEAGVINFYQYRDALTAHIDHSE----VTTDTPLVSLSVGQACIFLIAASRE-EEPLAIK 441
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL-------------LEETSMRRGRLNLTF 583
LESGD LI G SRR FHGV +I + P + GR+NL
Sbjct: 442 LESGDALIMAGPSRRFFHGVPRIIEHSLPPWIDGCLSTGPSPPPPWARWFHNGGRINLNV 501
Query: 584 RQ 585
RQ
Sbjct: 502 RQ 503
>gi|340053067|emb|CCC47352.1| putative Alkylated DNA repair protein (alkB homolog) [Trypanosoma
vivax Y486]
Length = 343
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P I N++ + HQD S+E++D+ P++S S+G S FL G +
Sbjct: 197 PQTSIVNYFPVGTMMMAHQDL--SEETLDQ--PLISISLGCSCVFLIGTTSREDAPHAIW 252
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEET 572
L SGDVL+ G+SR FHGV ++ D L ET
Sbjct: 253 LRSGDVLVMCGESRMAFHGVPRVMDDCPRYLTLSET 288
>gi|395330201|gb|EJF62585.1| hypothetical protein DICSQDRAFT_179896 [Dichomitus squalens
LYAD-421 SS1]
Length = 460
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I NFY L H D+ E I P+VS S+G +A FL G L ++
Sbjct: 323 PDAGIVNFYQTKDTLMAHADRSE----ICATSPLVSISLGCAAVFLIGGLTRDDPPTPIL 378
Query: 537 LESGDVLIFGGKS-RRIFHGVEKIFPDTAPKSL 568
L SGD ++ G + RR +HGV +I T P L
Sbjct: 379 LRSGDAVVMSGPACRRAYHGVPRILEGTLPPHL 411
>gi|341892671|gb|EGT48606.1| hypothetical protein CAEBREN_21324 [Caenorhabditis brenneri]
Length = 311
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ LG +D T QY P +G +P E +QL G I +S L +
Sbjct: 152 LRWTTLGVEYDWNTKQY----PPNGRP---VPEELYQL-GNLISNSLKLGD--------- 194
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
M PD I N+Y L H DK E + P++S S+G +A +L G L
Sbjct: 195 ------MRPDATILNYYPPKSALSPHVDKSERSNA-----PLISMSLGQTAVYLSGALSL 243
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLL--EETSMRR-----GRLNL 581
+ L +GD LI G+ R ++H + I P + EE M R+N
Sbjct: 244 SEPPIPLWLRNGDFLIMHGEQRLVYHAIPCIGPAVKREHFERDEEDPMISDYLNCSRINF 303
Query: 582 TFRQ 585
T RQ
Sbjct: 304 TIRQ 307
>gi|347963275|ref|XP_310984.4| AGAP000155-PA [Anopheles gambiae str. PEST]
gi|333467277|gb|EAA06442.4| AGAP000155-PA [Anopheles gambiae str. PEST]
Length = 318
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
SP+ I N+Y A L H D E D+ P+ SFS G A FL G +
Sbjct: 174 FSPEAAIVNYYPAGATLAGHTDHSED----DQTAPLFSFSFGQPAVFLIGGTSREEHPDA 229
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDT 563
++L SGD+++ G SR +H V ++ D
Sbjct: 230 LLLRSGDIVVMTGASRLCYHAVPRVCIDA 258
>gi|307202053|gb|EFN81599.1| Alkylated DNA repair protein alkB-like protein 1 [Harpegnathos
saltator]
Length = 308
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ LG + + T Y S +D +PVE L+G ++AL +D
Sbjct: 129 LRWATLGYHHNWNTKLYSESSKSD------MPVE---LLGLTSTLAKAL------DFRDF 173
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+AE I N+Y L H D+ E ++ P+ S S G +A FL G R
Sbjct: 174 KAE-------AAIVNYYRMNSTLAGHTDQSE----VNIAAPLFSMSFGQTAIFLIGGSRQ 222
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAP 565
A + L SGDV+I G SR +HG+ KI + P
Sbjct: 223 EDPADAMFLRSGDVVIMSGSSRLRYHGIPKILAASEP 259
>gi|224075559|ref|XP_002304683.1| predicted protein [Populus trichocarpa]
gi|222842115|gb|EEE79662.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N++++ LG H D E+ D P+VS S+G A FL G +
Sbjct: 236 PEAAIVNYFASGDTLGGHLDDMEA----DWSKPIVSMSLGCKAIFLLGGKSREDPPLAMF 291
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPD--TAPKSLLE---------ETSMRRGRLNLTFRQ 585
L SGDV++ G++R FHGV +IF D A + LE +R R+N+ RQ
Sbjct: 292 LRSGDVVLMAGEARECFHGVPRIFTDKENAEITALELHFCDENDILEYIRTSRININIRQ 351
>gi|255932511|ref|XP_002557812.1| Pc12g09870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582431|emb|CAP80614.1| Pc12g09870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 360
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 466 KDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD 525
K + A P S I N YSA L +H+D E + + ++S S G FL
Sbjct: 214 KVLRAAFPATSAQAAILNLYSAGDTLSVHRDVSEECD-----VGLISVSFGCDGLFLAS- 267
Query: 526 LRDVANAKKVI-LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D N ++I L SGD + GKSR +HGV KI P T PK L
Sbjct: 268 -HDDGNGCEIIRLRSGDTVYMSGKSRFAWHGVPKILPSTCPKWL 310
>gi|302829380|ref|XP_002946257.1| hypothetical protein VOLCADRAFT_115825 [Volvox carteri f.
nagariensis]
gi|300269072|gb|EFJ53252.1| hypothetical protein VOLCADRAFT_115825 [Volvox carteri f.
nagariensis]
Length = 365
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 16/161 (9%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKI-STGRKD 467
L+ LG +D QY +PP + QL A+++ + G +
Sbjct: 158 LRWATLGPQFDWTQRQYDFES-VYRRLPPSLEALAKQLA--------AVVDGLEGAGLRV 208
Query: 468 IEAELPC--MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGD 525
+ A C PD I N+Y LG H D E D P+VS S+G A FL G
Sbjct: 209 LPAAAACGGYRPDAAIVNYYQQGDVLGGHLDDVER----DMAQPIVSVSLGCPAIFLMGG 264
Query: 526 LRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPK 566
++L GDVL+ G +R +HGV +I P+
Sbjct: 265 RTKHVAPSALLLRGGDVLVLAGDARTCYHGVPRILEANYPR 305
>gi|221487023|gb|EEE25269.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 927
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
+P+ +L +Q + ++ GR+ P M + I N Y +L H+D
Sbjct: 648 LPLALEKLCDDILQFTEPFLQGPKEGRR------PRM--NAAILNVYRKGDRLRGHRDDA 699
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKVILESGDVLIFGGKSRRIFHGVE 557
E E+ P++S S+G A FL G D R VA K ++L SGDVL+ G +R HGV
Sbjct: 700 ERAEA-----PLISISLGQPAIFLLGGDSRRVA-PKALVLRSGDVLVLSGAARWAVHGVP 753
Query: 558 KIF 560
K+
Sbjct: 754 KLL 756
>gi|356566058|ref|XP_003551252.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Glycine max]
Length = 358
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N++ LG H D E+ D P+VS S+G A FL G +
Sbjct: 239 PEAAIVNYFGLGDTLGGHLDDMEA----DWSKPIVSLSLGCKAIFLLGGKSREDTPLAMF 294
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLE-ETSMRRGRLNLTFRQY 586
L+SGDV++ G +R FHGV +IF D + ET + R +L F QY
Sbjct: 295 LQSGDVVLMAGDARECFHGVPRIFTDKENAEIGHLETQLTRED-DLCFLQY 344
>gi|343172810|gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
latifolia]
Length = 354
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N++++ LG H D E +D P+VS S+G FL G
Sbjct: 233 FKPEAAIVNYFASGDTLGGHLDDME----LDWSKPIVSMSLGCKGIFLLGGKSREDEPLA 288
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPD------TAPKSLLEETS-------MRRGRLNL 581
+ L SGDV++ G++R FHGV +IF D TA + L S ++ R+N+
Sbjct: 289 MFLRSGDVVLMAGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRINI 348
Query: 582 TFRQ 585
RQ
Sbjct: 349 NIRQ 352
>gi|237831661|ref|XP_002365128.1| hypothetical protein TGME49_059140 [Toxoplasma gondii ME49]
gi|211962792|gb|EEA97987.1| hypothetical protein TGME49_059140 [Toxoplasma gondii ME49]
gi|221506706|gb|EEE32323.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 927
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 439 IPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKD 498
+P+ +L +Q + ++ GR+ P M + I N Y +L H+D
Sbjct: 648 LPLALEKLCDDILQFTEPFLQGPKEGRR------PRM--NAAILNVYRKGDRLRGHRDDA 699
Query: 499 ESQESIDKCLPVVSFSIGDSAEFLYG-DLRDVANAKKVILESGDVLIFGGKSRRIFHGVE 557
E E+ P++S S+G A FL G D R VA K ++L SGDVL+ G +R HGV
Sbjct: 700 ERAEA-----PLISISLGQPAIFLLGGDSRRVA-PKALVLRSGDVLVLSGAARWAVHGVP 753
Query: 558 KIF 560
K+
Sbjct: 754 KLL 756
>gi|383864207|ref|XP_003707571.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Megachile rotundata]
Length = 308
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y L H D E I+ P+ S S G +A FL G L A + L SG
Sbjct: 179 IVNYYRMNSSLSGHTDHSE----INTEAPLFSISFGQTAIFLIGGLTQDDAANAMYLRSG 234
Query: 541 DVLIFGGKSRRIFHGVEKIFP-DTAP 565
D++I G SR +HGV KI P DT P
Sbjct: 235 DIVIMSGNSRLRYHGVPKILPADTIP 260
>gi|388517699|gb|AFK46911.1| unknown [Lotus japonicus]
Length = 365
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N++++ LG H D E+ D P+VS S+G A FL G +
Sbjct: 246 PEAAIVNYFTSGDTLGGHLDDMEA----DWSKPIVSLSLGCKAIFLLGGKSKEDLPLAMF 301
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPD 562
L SGDV++ G++R FHGV +IF D
Sbjct: 302 LRSGDVVLMAGEARECFHGVPRIFTD 327
>gi|325096181|gb|EGC49491.1| oxidoreductase [Ajellomyces capsulatus H88]
Length = 420
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 69/171 (40%), Gaps = 34/171 (19%)
Query: 426 GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
G TD P IP +F D +L+ KI P P+ I N Y
Sbjct: 202 GQYNWTDKVYPAEIPPQFPA-------DIASLLRKI----------FPETKPEAAIVNLY 244
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
S L +H+D E ++ ++S S G F+ G L D A + + L SGD +
Sbjct: 245 SPGDTLSVHRDVSEECDT-----GLISISFGCDGLFMVGHL-DGAGCEIIRLRSGDAVYM 298
Query: 546 GGKSRRIFHGVEKIFPDTAPKSLLE-----------ETSMRRGRLNLTFRQ 585
G++R +H V KI P T P+ L + M R+NL RQ
Sbjct: 299 SGQARFAWHAVPKIIPSTCPEWLADWPGNAAQFEQWRGWMSNKRINLNVRQ 349
>gi|343172808|gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
latifolia]
Length = 354
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N++++ LG H D E +D P+VS S+G FL G
Sbjct: 233 FKPEAAIVNYFASGDTLGGHLDDME----LDWSKPIVSMSLGCKGIFLLGGKSREDEPLA 288
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPD------TAPKSLLEETS-------MRRGRLNL 581
+ L SGDV++ G++R FHGV +IF D TA + L S ++ R+N+
Sbjct: 289 MFLRSGDVVLMAGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRINI 348
Query: 582 TFRQ 585
RQ
Sbjct: 349 NIRQ 352
>gi|291242901|ref|XP_002741372.1| PREDICTED: alkylated DNA repair protein alkB homolog [Saccoglossus
kowalevskii]
Length = 416
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y+ + LG H D+ E D P++SFS G +A +L G + L+SG
Sbjct: 206 IVNYYNMSSTLGGHVDEAE----FDMTAPLISFSFGQTALYLLGGKTRSVKPDAMFLKSG 261
Query: 541 DVLIFGGKSRRIFHGVEKIFP 561
D+++ G SR +H V +I P
Sbjct: 262 DIMLMSGDSRWAYHSVPRILP 282
>gi|168050410|ref|XP_001777652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670995|gb|EDQ57554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 409 LKMMCLGKNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDI 468
L+ +G +D Y + P +PP + +L A+++ +D
Sbjct: 232 LRWATVGIQFDWSKRAYNEALPFQ-EIPPKLADLARRLAKPAMEN------------EDF 278
Query: 469 EAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRD 528
+AE I NFY LG H D E+ D P+VS S+G A FL G
Sbjct: 279 KAEA-------AIVNFYGPDDMLGGHVDDMEA----DMSKPIVSISLGCKAIFLLGGTTR 327
Query: 529 VANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSM 574
+ + SGDV++ G +R FHGV +IF + L + TSM
Sbjct: 328 DEPPAAMFVRSGDVVLMAGPARHCFHGVPRIFSEAKESELPDFTSM 373
>gi|387594600|gb|EIJ89624.1| hypothetical protein NEQG_00394 [Nematocida parisii ERTm3]
gi|387596553|gb|EIJ94174.1| hypothetical protein NEPG_00841 [Nematocida parisii ERTm1]
Length = 315
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 460 KISTGRKDIEAELP------CM--SPDICIANFYSATGKLGLHQDKDESQESIDK----- 506
+I K+I +++P CM S +IC +F T + +Q KD ID+
Sbjct: 167 EIKAYNKEITSKIPDVIDQVCMDISQEICKVSFIPETAVINYYQKKDRIMSHIDRYEEDM 226
Query: 507 CLPVVSFSIGDSAEFLYGDL-RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIF 560
P++SFS G S F+ G R+ + +LE GD+ I G SR FHGV KI
Sbjct: 227 SKPLISFSFGASCVFVLGTKEREDPSVDTFLLEDGDIAILIGDSREYFHGVPKIL 281
>gi|401407066|ref|XP_003882982.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117398|emb|CBZ52950.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 957
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 474 CMSPDI--CIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVAN 531
C P + I N Y +L H+D E E+ P++S S+G A FL G +
Sbjct: 709 CKRPKMNAAILNVYRKGDRLRGHKDDAERVEA-----PLISISLGQPAIFLLGGVSRQVA 763
Query: 532 AKKVILESGDVLIFGGKSRRIFHGVEKIF 560
K V+L SGDVL+ G +R HGV K+
Sbjct: 764 PKAVVLRSGDVLVLSGPARWAVHGVPKLL 792
>gi|302503801|ref|XP_003013860.1| hypothetical protein ARB_07972 [Arthroderma benhamiae CBS 112371]
gi|291177426|gb|EFE33220.1| hypothetical protein ARB_07972 [Arthroderma benhamiae CBS 112371]
Length = 356
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 468 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLR 527
++ P P+ I N YS L +H+D E ++ ++S S G F+
Sbjct: 221 LQGIFPATQPEAAIVNVYSPGDTLHIHRDVSEECDT-----GLISISFGCDGLFMVSH-A 274
Query: 528 DVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
D +N + L SGD + GG SR +HGV +I PDT P L
Sbjct: 275 DNSNLAVIRLRSGDAVYMGGASRVSWHGVPRILPDTCPSWL 315
>gi|384250411|gb|EIE23890.1| hypothetical protein COCSUDRAFT_62420 [Coccomyxa subellipsoidea
C-169]
Length = 499
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 446 LVGKAIQDSRALIEKISTGRKDIEAE-LPCMSPDICIANFYSATGKLGLHQDKDESQESI 504
L G QD + ++ +G +E + P++ + N+Y LG H+D E
Sbjct: 356 LAGDGRQDCKVPAAEVKSGVDGLEGQSQGAWEPEVALVNYYREGDTLGGHKDDAERNMHA 415
Query: 505 DKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIF 560
P+V+ S+G A FL G + + GD ++ G+SR+ +HG+ ++F
Sbjct: 416 ----PIVALSLGCDAIFLLGGETRDGEPVAMRIRGGDAIVMEGRSRQCYHGIPRVF 467
>gi|225425416|ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB [Vitis
vinifera]
gi|297738457|emb|CBI27658.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Query: 460 KISTGRKDIEAEL--PCMS------PDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
KI D+ E+ P MS P+ I N++ LG H D E+ D P+V
Sbjct: 216 KIPDALCDLAKEMAAPAMSKGKVFQPEAAIVNYFGLGDMLGGHLDDMEA----DWTKPIV 271
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPD-----TAPK 566
S S+G A FL G + + SGDV++ G++R FHGV +IF D AP
Sbjct: 272 SMSLGCKAIFLLGGKSRDDPPLAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPL 331
Query: 567 SLLEE--------TSMRRGRLNLTFRQ 585
L+ +R R+N+ RQ
Sbjct: 332 ELMFSHEDDVCFLEYIRSSRININIRQ 358
>gi|147833916|emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]
Length = 366
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Query: 460 KISTGRKDIEAEL--PCMS------PDICIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
KI D+ E+ P MS P+ I N++ LG H D E+ D P+V
Sbjct: 222 KIPDALCDLAKEMAAPAMSKGKVFQPEAAIVNYFGLGDMLGGHLDDMEA----DWTKPIV 277
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPD-----TAPK 566
S S+G A FL G + + SGDV++ G++R FHGV +IF D AP
Sbjct: 278 SMSLGCKAIFLLGGKSRDDPPLAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPL 337
Query: 567 SLLEE--------TSMRRGRLNLTFRQ 585
L+ +R R+N+ RQ
Sbjct: 338 ELMFSHEDDVCFLEYIRSSRININIRQ 364
>gi|452846411|gb|EME48343.1| hypothetical protein DOTSEDRAFT_118289 [Dothistroma septosporum
NZE10]
Length = 315
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
++ +E P M + I N YS L LH+D E P++S S+G A F+ G
Sbjct: 181 KRLVEDVFP-MKAEAAIVNLYSPGDTLSLHRDVSEECNR-----PLISISLGCDAIFICG 234
Query: 525 DLRDVANAKKVI---LESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETS-------- 573
A +V L SGD ++ G+SR +HGV ++ PDT P + + +
Sbjct: 235 LEPKGGGAPRVATIRLRSGDAVLMSGESRYAWHGVPQVVPDTCPTWMQDWPATSDVGQDF 294
Query: 574 ------MRRGRLNLTFRQ 585
M+ R+NL RQ
Sbjct: 295 EHWRGWMKGKRVNLNVRQ 312
>gi|66472360|ref|NP_001018527.1| alkylated DNA repair protein alkB homolog 1 [Danio rerio]
gi|63102531|gb|AAH95784.1| Zgc:112365 [Danio rerio]
gi|182890576|gb|AAI64762.1| Zgc:112365 [Danio rerio]
Length = 363
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
I N+Y + LG+H D+ E +D P++S+S G +A FL G + + + SG
Sbjct: 199 ILNYYRSDSSLGIHVDESE----LDHTRPLLSYSFGQTAVFLLGGTKREDRPTALFMHSG 254
Query: 541 DVLIFGGKSRRIFHGVEKIFPDTA 564
D+++ G SR +H V I P A
Sbjct: 255 DIMVMSGPSRLHYHAVPCIVPSPA 278
>gi|312375452|gb|EFR22824.1| hypothetical protein AND_14149 [Anopheles darlingi]
Length = 314
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
SP+ I NFY L H D E D P+ S S G A FL G
Sbjct: 151 FSPEASIVNFYPVGSTLAGHTDHSED----DLTAPLFSISFGRPAIFLVGGPTRNETPDA 206
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIF 560
++L+SGD+++ G SR+ +H V ++F
Sbjct: 207 ILLQSGDIVVMSGPSRQYYHAVPRVF 232
>gi|301093209|ref|XP_002997453.1| alkylated DNA repair protein alkB-like protein [Phytophthora
infestans T30-4]
gi|262110709|gb|EEY68761.1| alkylated DNA repair protein alkB-like protein [Phytophthora
infestans T30-4]
Length = 309
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
+ + I N+Y +G H D + + ++D PVVS S+G FL G +
Sbjct: 176 LEAEAVIVNYYKTKSSMGGHLD--DVEYTMDH--PVVSLSLGSKCVFLMGGHTKDEAPLE 231
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFP 561
++L SGD+ I GG SR +HGV ++ P
Sbjct: 232 ILLRSGDIAIMGGASRTCYHGVARVLP 258
>gi|293332709|ref|NP_001168927.1| uncharacterized protein LOC100382739 [Zea mays]
gi|223973785|gb|ACN31080.1| unknown [Zea mays]
gi|413920823|gb|AFW60755.1| hypothetical protein ZEAMMB73_863004 [Zea mays]
Length = 389
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N+Y + LG H D E+ D P+VS S+G FL G
Sbjct: 268 FKPEAAIVNYYGPSDMLGGHVDDMEA----DWTKPIVSISLGCKCIFLLGGKTRDEVPTA 323
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPK---SLLEETS----------MRRGRLNL 581
+ L SGD+++ G++R FHGV +IF ++ + +L+ + S ++ R+N+
Sbjct: 324 MFLRSGDIVLMAGEARERFHGVPRIFTESDQQEIPALISQLSSGDDVFILEYIKNSRINI 383
Query: 582 TFRQ 585
RQ
Sbjct: 384 NIRQ 387
>gi|440803484|gb|ELR24384.1| alkylation repair protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 152
Score = 55.5 bits (132), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 509 PVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
P+VS S+G SA FL G + ++L SGDV++ GG SR ++HGV +I P T P L
Sbjct: 41 PIVSISLGLSAIFLLGGRTREEKPRAMLLRSGDVVVMGGASRLLYHGVPRILPATLPPEL 100
>gi|413920824|gb|AFW60756.1| hypothetical protein ZEAMMB73_863004 [Zea mays]
Length = 366
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N+Y + LG H D E+ D P+VS S+G FL G
Sbjct: 245 FKPEAAIVNYYGPSDMLGGHVDDMEA----DWTKPIVSISLGCKCIFLLGGKTRDEVPTA 300
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPK---SLLEETS----------MRRGRLNL 581
+ L SGD+++ G++R FHGV +IF ++ + +L+ + S ++ R+N+
Sbjct: 301 MFLRSGDIVLMAGEARERFHGVPRIFTESDQQEIPALISQLSSGDDVFILEYIKNSRINI 360
Query: 582 TFRQ 585
RQ
Sbjct: 361 NIRQ 364
>gi|156392096|ref|XP_001635885.1| predicted protein [Nematostella vectensis]
gi|156222983|gb|EDO43822.1| predicted protein [Nematostella vectensis]
Length = 323
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 28/134 (20%)
Query: 476 SPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKV 535
+P+ I N+Y + +G H D E +D P++S S G SA FL G +
Sbjct: 185 TPEAGIVNYYPLSASMGGHTDHYE----LDLSWPLISVSFGQSAVFLIGGKTKDVKPTAL 240
Query: 536 ILESGDVLIFGGKSRRIFHGVEKI--------FPDTA---PKSLLEET------------ 572
+ SGD+LI G++R FH V +I P+ + PK+ L ++
Sbjct: 241 YIRSGDILIMSGEARLAFHAVPRIIQVQTKDNIPEDSCCNPKAFLTQSPPMTEEEWLPFA 300
Query: 573 -SMRRGRLNLTFRQ 585
+ R R+N+ RQ
Sbjct: 301 KYLSRTRINVNVRQ 314
>gi|242070933|ref|XP_002450743.1| hypothetical protein SORBIDRAFT_05g016810 [Sorghum bicolor]
gi|241936586|gb|EES09731.1| hypothetical protein SORBIDRAFT_05g016810 [Sorghum bicolor]
Length = 362
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N+Y + LG H D E+ D P+VS S+G FL G
Sbjct: 241 FKPEAAIVNYYGPSDMLGGHVDDMEA----DWTKPIVSISLGCKCIFLLGGKTRDEVPTA 296
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPK---SLLEETS----------MRRGRLNL 581
+ L SGD+++ G++R FHGV +IF ++ + +L+ + S ++ R+N+
Sbjct: 297 MFLRSGDIVLMAGEARERFHGVPRIFAESDQQEISALISQLSSGDDDFILDYIKNSRINI 356
Query: 582 TFRQ 585
RQ
Sbjct: 357 NIRQ 360
>gi|218185752|gb|EEC68179.1| hypothetical protein OsI_36130 [Oryza sativa Indica Group]
Length = 790
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N+Y + LG H D E+ D P+VS S+G FL G
Sbjct: 669 FKPEAAIVNYYGPSDMLGGHVDDMEA----DWSKPIVSISLGCKCIFLLGGKTRDEVPTA 724
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDT--------APKSLLEETS-----MRRGRLNL 581
+ L SGD+++ G++R FHGV +IF + P+ E+ S ++ R+N+
Sbjct: 725 MFLRSGDIVLMAGEARECFHGVPRIFTGSDQAEISALVPQLSAEDDSFILNYIQNSRINI 784
Query: 582 TFRQ 585
RQ
Sbjct: 785 NIRQ 788
>gi|45555401|ref|NP_996458.1| AlkB [Drosophila melanogaster]
gi|41616516|tpg|DAA03352.1| TPA_inf: HDC19127 [Drosophila melanogaster]
gi|45446984|gb|AAS65359.1| AlkB [Drosophila melanogaster]
gi|157816744|gb|ABV82365.1| LD02396p [Drosophila melanogaster]
Length = 332
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 475 MSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKK 534
P+ I N+Y L H D E +K P+ SFS G +A FL G
Sbjct: 185 FKPEAAIVNYYPVGSTLSGHTDHSEP----NKSAPLFSFSFGQTAIFLIGGRSLEEKPTA 240
Query: 535 VILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSL 568
+ L+SGDV+I G+SR +H V +I A +L
Sbjct: 241 IYLQSGDVMIMSGESRLCYHAVPRIIKTQASATL 274
>gi|340506165|gb|EGR32370.1| hypothetical protein IMG5_085860 [Ichthyophthirius multifiliis]
Length = 500
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 457 LIEKISTGRKDI-EAELPCMS---PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVS 512
LI+ +S K++ + E+P +S P+ I NFY + H D E D+ P+ S
Sbjct: 336 LIQNLSKISKELFQKEIPDVSLYEPEAVIINFYDKKNYMSGHLDDGEK----DQKSPIFS 391
Query: 513 FSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 559
FS G S FL GD+ + + L+SGD+++ G SR +HGV ++
Sbjct: 392 FSFGVSCVFLMGDVNKDFSPLPIKLDSGDLMVMSGYSRNCYHGVPRV 438
>gi|356540136|ref|XP_003538546.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Glycine max]
Length = 358
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
PD I N++ LG H D E+ D P+VS S+G A FL G +
Sbjct: 239 PDAAIVNYFGLGDTLGGHLDDMEA----DWSKPIVSLSLGCKAIFLLGGKSREDTPLAMF 294
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPD 562
L SGD ++ G +R FHGV +IF D
Sbjct: 295 LRSGDAVLMAGDARECFHGVPRIFTD 320
>gi|307171459|gb|EFN63303.1| Alkylated DNA repair protein alkB-like protein 1 [Camponotus
floridanus]
Length = 306
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 409 LKMMCLG--KNWDPETSQYGTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRK 466
L+ LG NWD T Y S +D +P+E L I + G
Sbjct: 128 LRWATLGYHHNWD--TKLYSESSKSD------MPIELSGLTS---------ILARTLGFS 170
Query: 467 DIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDL 526
D +AE I N+Y L H D E ++ P+ S S G +A FL G
Sbjct: 171 DFKAE-------AAIVNYYRMNSTLAGHTDHSE----MNITAPLFSISFGQTAIFLIGGP 219
Query: 527 RDVANAKKVILESGDVLIFGGKSRRIFHGVEKIF 560
+ A + L SGDV+I G SR +HGV KI
Sbjct: 220 KQEDPANAIFLRSGDVIIMSGNSRLRYHGVPKIL 253
>gi|157867117|ref|XP_001682113.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125565|emb|CAJ03488.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 368
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 457 LIEKISTGRKDIEAELPCMSPDI-----CIANFYSATGKLGLHQDKDESQESIDKCLPVV 511
L+ ++ R+D C PD+ I N+Y + HQD S+E++++ P++
Sbjct: 172 LVSLVAGVRQD---GFCCAYPDVYEPQTAIVNYYPVGSMMMCHQDI--SEETLEQ--PLM 224
Query: 512 SFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPD-----TAPK 566
S S+G SA FL G +L SGDV F G SR FH + +I D T P+
Sbjct: 225 SLSLGCSAIFLMGTQSREDAPYAFLLRSGDVAAFTGPSRSAFHSIPRILDDCPAYLTLPE 284
Query: 567 SLLEETSMRR 576
L E R
Sbjct: 285 DELTEAERHR 294
>gi|308799171|ref|XP_003074366.1| DNA alkylation damage repair protein (ISS) [Ostreococcus tauri]
gi|116000537|emb|CAL50217.1| DNA alkylation damage repair protein (ISS) [Ostreococcus tauri]
Length = 836
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 481 IANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESG 540
+ N+Y L H D +++ ++D+ P+VS S+G A FL G + +IL SG
Sbjct: 220 LVNYYQPGDTLNGHMD--DAENNLDR--PIVSISLGCPAVFLLGHENRDKSPTAMILRSG 275
Query: 541 DVLIFGGKSRRIFHGVEKIF 560
D +I GG+SR+ +HGV ++F
Sbjct: 276 DAVILGGESRKCYHGVPRVF 295
>gi|196005755|ref|XP_002112744.1| hypothetical protein TRIADDRAFT_24904 [Trichoplax adhaerens]
gi|190584785|gb|EDV24854.1| hypothetical protein TRIADDRAFT_24904, partial [Trichoplax
adhaerens]
Length = 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 64/167 (38%), Gaps = 42/167 (25%)
Query: 409 LKMMCLGKNWDPETSQYGTSR----PTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTG 464
L+ LG ++D T +Y +R PTD A E +L+ +
Sbjct: 77 LRWTTLGYHYDWSTKEYYHNRKSEFPTDLA-------ELTKLLAATVG------------ 117
Query: 465 RKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYG 524
P SP+ I N+Y L H D E D P+ S S G A FL G
Sbjct: 118 -------FPLFSPEAAIINYYKLDSTLSGHTDHSE----FDFTAPLFSISFGQKAIFLLG 166
Query: 525 DLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEE 571
+ +ESGD+ I G+SR +H V P+ +LEE
Sbjct: 167 GRTTSVTPVAMYIESGDICIMSGESRLAYHAV--------PRIILEE 205
>gi|223972739|gb|ACN30557.1| unknown [Zea mays]
Length = 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 477 PDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVI 536
P+ I N+Y + LG H D E+ D P+VS S+G FL G +
Sbjct: 14 PEAAIVNYYGPSDMLGGHVDDMEA----DWTKPIVSISLGCKCIFLLGGKTRDEVPTAMF 69
Query: 537 LESGDVLIFGGKSRRIFHGVEKIFPDTAPK---SLLEETS----------MRRGRLNLTF 583
L SGD+++ G++R FHGV +IF ++ + +L+ + S ++ R+N+
Sbjct: 70 LRSGDIVLMAGEARERFHGVPRIFTESDQQEIPALISQLSSGDDVFILEYIKNSRININI 129
Query: 584 RQ 585
RQ
Sbjct: 130 RQ 131
>gi|240278118|gb|EER41625.1| oxidoreductase [Ajellomyces capsulatus H143]
Length = 413
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 426 GTSRPTDGAVPPIIPVEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFY 485
G TD P IP +F D +L+ KI P P+ I N Y
Sbjct: 202 GQYNWTDKVYPAEIPPQFPA-------DIASLLRKI----------FPETKPEAAIVNLY 244
Query: 486 SATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIF 545
S L +H+D E ++ ++S S G F+ G L D A + + L SGD +
Sbjct: 245 SPGDTLSVHRDVSEECDT-----GLISISFGCDGLFMVGHL-DGAGCEIIRLRSGDAVYM 298
Query: 546 GGKSRRIFHGVEKIFPDTAPKSL 568
G++R +H V KI P T P+ L
Sbjct: 299 SGQARFAWHAVPKIIPSTCPEWL 321
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,960,645,770
Number of Sequences: 23463169
Number of extensions: 447054966
Number of successful extensions: 707484
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 705068
Number of HSP's gapped (non-prelim): 1271
length of query: 586
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 438
effective length of database: 8,886,646,355
effective search space: 3892351103490
effective search space used: 3892351103490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)