Your job contains 1 sequence.
>040019
MAVCLCCHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRL
QVKVLSMSRLGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLME
EDIGAAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPESSTPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040019
(166 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 512 4.1e-49 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 496 2.0e-47 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 470 1.2e-44 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 344 2.6e-31 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 337 1.4e-30 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 335 2.3e-30 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 317 1.9e-28 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 313 1.1e-27 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 296 3.2e-26 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 297 9.0e-26 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 164 1.8e-12 2
TAIR|locus:2045263 - symbol:AT2G31730 species:3702 "Arabi... 113 7.4e-12 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 168 1.0e-11 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 154 1.5e-11 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 163 3.0e-11 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 152 5.8e-11 1
TAIR|locus:2115683 - symbol:AT4G05170 "AT4G05170" species... 127 6.0e-11 2
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 155 1.2e-10 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 156 1.3e-10 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 156 1.4e-10 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 153 2.1e-10 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 135 2.8e-10 2
TAIR|locus:2090679 - symbol:AT3G19500 species:3702 "Arabi... 117 3.2e-10 2
TAIR|locus:2141216 - symbol:B70 species:3702 "Arabidopsis... 113 3.4e-10 2
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 143 5.2e-10 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 148 5.2e-10 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 151 5.3e-10 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 144 6.1e-10 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 148 7.9e-10 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 141 8.4e-10 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 144 1.1e-09 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 143 1.6e-09 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 146 1.6e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 143 1.6e-09 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 138 1.8e-09 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 146 1.9e-09 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 144 2.1e-09 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 142 2.1e-09 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 146 2.2e-09 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 145 2.2e-09 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 145 2.9e-09 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 143 3.1e-09 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 136 3.3e-09 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 143 3.3e-09 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 140 3.4e-09 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 141 3.4e-09 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 141 4.1e-09 1
TAIR|locus:2083460 - symbol:AT3G20640 species:3702 "Arabi... 119 4.3e-09 2
UNIPROTKB|Q657Z3 - symbol:P0005A05.10 "Putative ethylene-... 116 4.3e-09 2
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 136 4.4e-09 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 140 4.7e-09 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 141 5.0e-09 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 134 5.9e-09 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 138 6.1e-09 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 141 6.2e-09 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 136 6.9e-09 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 135 6.9e-09 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 139 7.5e-09 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 125 8.0e-09 2
TAIR|locus:2199216 - symbol:AT1G27660 species:3702 "Arabi... 118 8.8e-09 2
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 140 9.4e-09 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 136 9.7e-09 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 137 1.0e-08 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 136 1.0e-08 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 142 1.2e-08 1
UNIPROTKB|Q60EJ4 - symbol:OSJNBa0017K09.4 "Os05g0501200 p... 116 1.2e-08 2
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 136 1.2e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 135 1.3e-08 1
TAIR|locus:2195763 - symbol:AT1G61660 "AT1G61660" species... 113 1.5e-08 2
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 131 1.5e-08 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 130 1.7e-08 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 132 1.8e-08 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 131 1.8e-08 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 135 2.1e-08 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 134 2.2e-08 1
UNIPROTKB|Q94HA7 - symbol:OSJNBb0048A17.16 "Os03g0759700 ... 112 3.6e-08 2
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 131 3.8e-08 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 130 4.9e-08 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 129 5.0e-08 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 125 5.1e-08 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 124 5.3e-08 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 124 5.3e-08 1
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 129 5.5e-08 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 118 5.6e-08 2
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 129 6.2e-08 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 131 6.9e-08 1
UNIPROTKB|Q75IG3 - symbol:P0499F10.3 "Putative uncharacte... 127 7.3e-08 1
UNIPROTKB|Q5NB28 - symbol:P0485D09.22 "Os01g0230200 prote... 130 8.5e-08 1
UNIPROTKB|Q7X7U7 - symbol:OSJNBb0091E11.4 "OJ990528_30.9 ... 106 8.7e-08 2
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 130 8.9e-08 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 124 1.6e-07 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 121 3.2e-07 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 121 3.2e-07 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 123 3.9e-07 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 120 4.1e-07 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 119 5.3e-07 1
TAIR|locus:2007263 - symbol:AT1G49830 species:3702 "Arabi... 108 8.7e-07 2
TAIR|locus:2177649 - symbol:AT5G64980 "AT5G64980" species... 119 9.9e-07 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 119 1.1e-06 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 114 1.2e-06 1
WARNING: Descriptions of 14 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 102/148 (68%), Positives = 122/148 (82%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRERIA+R+RALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR
Sbjct: 162 RLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAP 221
Query: 79 XXXDVPLSSALEGESIDGGSS-QPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
D+PLSS++E E+ +GG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+
Sbjct: 222 LVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCM 281
Query: 138 MPISLASAIYRTRQPDAPAFVKPESSTP 165
MPISLA AIY ++ PD + VKPE++ P
Sbjct: 282 MPISLAMAIYHSQPPDTSSVVKPENNPP 309
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 104/148 (70%), Positives = 117/148 (79%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR
Sbjct: 149 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 208
Query: 79 XXXDVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
D+PLS ++GE+ D G +Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 209 LVADIPLS--VKGEASDSGGNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMM 266
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+Q VK E +TPS
Sbjct: 267 PISLAMAIYDTQQTQDGQPVKHEPNTPS 294
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 98/148 (66%), Positives = 117/148 (79%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRERIA+R+R+LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR
Sbjct: 160 RLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAP 219
Query: 79 XXXDVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
++PLSS++E E+ Q WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALCIM
Sbjct: 220 LVTEMPLSSSVEDET------QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIM 273
Query: 139 PISLASAIYRTRQPD-APAFVKPESSTP 165
PISLA AIY ++ PD + + VKPE + P
Sbjct: 274 PISLAMAIYHSQPPDTSSSIVKPEMNPP 301
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 75/128 (58%), Positives = 91/128 (71%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 213
Query: 79 XXXDVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
+ S ++ GGS S TE QVAKLMEED+G+AMQ+LQ K LC+M
Sbjct: 214 QISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLM 273
Query: 139 PISLASAI 146
PISLA+AI
Sbjct: 274 PISLATAI 281
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 77/136 (56%), Positives = 96/136 (70%)
Query: 20 LRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXX 79
LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR
Sbjct: 251 LRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPL 310
Query: 80 XXDVP---------LSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
++ SS+ GE+ +G S+ + TEQQVAKLMEED+G+AMQ+L
Sbjct: 311 VANMSSESNGNGNATSSSGNGEAANGSSNGDNNGGGTLRVTEQQVAKLMEEDMGSAMQYL 370
Query: 131 QSKALCIMPISLASAI 146
Q K LC+MPISLA+AI
Sbjct: 371 QGKGLCLMPISLATAI 386
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 78/147 (53%), Positives = 98/147 (66%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR
Sbjct: 146 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASA-- 203
Query: 79 XXXDVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
SS + ++ GGS + TE QVAKLMEED+G+AMQ+LQ K LC+M
Sbjct: 204 -------SSQISEDA--GGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLM 254
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTP 165
PISLA+ I P FVK ++ P
Sbjct: 255 PISLATTISTATCPSRSPFVK-DTGVP 280
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 74/152 (48%), Positives = 98/152 (64%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI++YV+FL+LQVKVLSMSR
Sbjct: 115 RLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGP 174
Query: 79 XXXDVPLSS-----ALEG--ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQ 131
+ + AL ++G + S TEQ+VAKLMEED+G+AMQ+LQ
Sbjct: 175 RLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQ 234
Query: 132 SKALCIMPISLASAIYRTRQPDAPAFVKPESS 163
K LC+MPISLA+AI + + P SS
Sbjct: 235 GKGLCLMPISLATAISSSTTHSRGSLFNPISS 266
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 313 (115.2 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 78/141 (55%), Positives = 93/141 (65%)
Query: 19 QLRRERIADRMRALQELVPSCNK---TDRAAMLDEIVDYVKFLRLQVK----------VL 65
+LRRERIA+RM+ALQELVP+ NK TD+A+MLDEI+DYVKFL+LQVK VL
Sbjct: 266 RLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVKASTYTKLLIHVL 325
Query: 66 SMSRXXXXXXXXXXXXDVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGA 125
SMSR D+ S G + +GG+ S TEQQVAKLMEED+G
Sbjct: 326 SMSRLGGAAAVAPLVADMS-SEGRGGGAANGGAPAAAGSD-SLTVTEQQVAKLMEEDMGT 383
Query: 126 AMQFLQSKALCIMPISLASAI 146
AMQ+LQ K LC+MPISLASAI
Sbjct: 384 AMQYLQGKGLCLMPISLASAI 404
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 70/148 (47%), Positives = 94/148 (63%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXX- 77
+LRRE+I++RM+ LQ LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSR
Sbjct: 255 RLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 314
Query: 78 ---XXXXDVPLSSALEGESIDGGS-SQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
+ + +L +I G P+ E + EQ+V KLME I +AMQ+LQ+K
Sbjct: 315 LLRESQTECHSNPSLSASTISQGPPDMPDSE--DSSAFEQEVVKLMETSIISAMQYLQNK 372
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MPI+LASAI + A A + PE
Sbjct: 373 GLCLMPIALASAISNQKGMAAAAAIPPE 400
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 297 (109.6 bits), Expect = 9.0e-26, P = 9.0e-26
Identities = 75/159 (47%), Positives = 102/159 (64%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXX 78
+LRRE+I+DRM+ LQELVP+ NKT++A+MLDEI+DYVKFL+LQVKVLSMSR
Sbjct: 330 RLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSRLGAAEAVVP 389
Query: 79 XXXDV----------PLSSALEGES----IDGG--SSQPEWEKWSNDGTEQQVAKLMEED 122
+ P SS+ E ++ + GG QPE EQ+V KLME++
Sbjct: 390 LLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPELLD-GGAMFEQEVVKLMEDN 448
Query: 123 IGAAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
+ AMQ+LQSK LC+MP++LASAI ++ + A V+PE
Sbjct: 449 MTTAMQYLQSKGLCLMPVALASAI-SAQKGTSSAAVRPE 486
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 164 (62.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 324 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 370
Score = 34 (17.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 135 LCIMPISLASAIYRTRQPDAPAF 157
LCI P+ L +A+ + P F
Sbjct: 374 LCIPPMLLPTAMQHLQIPPMAHF 396
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 113 (44.8 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 14 LFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
L F + R++++A+R+ ALQ+LV KTD A++L E + Y++FL+ QVKVLS
Sbjct: 34 LSFSSKERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLS 86
Score = 60 (26.2 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 130 LQSKALCIMPISLASAIYRTRQPDAPAFVK-PESS 163
L+SK LC++P+ S + +T D A VK P SS
Sbjct: 106 LRSKGLCLVPLEYTSEVAQTNGADIWAPVKTPTSS 140
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 168 (64.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 29/48 (60%), Positives = 44/48 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM+
Sbjct: 355 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 402
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 154 (59.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI +RM+ LQEL+P C KTD+ +ML+++++YVK L+LQ++++SM
Sbjct: 369 RRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSM 415
Score = 35 (17.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 137 IMPISLASAIYRTRQPDAPAFVKPESSTPS 166
I P S +++ +QP P +P +S PS
Sbjct: 508 INPYSQFVGLHQMQQPPLPLQGQP-TSQPS 536
Score = 34 (17.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 151 QPDAPAFVKPES 162
QP PA++ P S
Sbjct: 501 QPRFPAYINPYS 512
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 163 (62.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 296 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 27/54 (50%), Positives = 44/54 (81%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
F + RR+RI ++++ALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M +
Sbjct: 20 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK 73
>TAIR|locus:2115683 [details] [associations]
symbol:AT4G05170 "AT4G05170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL161503 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000095220 EMBL:BT015446 IPI:IPI00532427 IPI:IPI01019413
PIR:A85065 RefSeq:NP_192426.2 UniGene:At.51015
ProteinModelPortal:Q9M0X8 SMR:Q9M0X8 DNASU:825865 GeneID:825865
KEGG:ath:AT4G05170 TAIR:At4g05170 eggNOG:NOG256664 PhylomeDB:Q9M0X8
ArrayExpress:Q9M0X8 Genevestigator:Q9M0X8 Uniprot:Q9M0X8
Length = 298
Score = 127 (49.8 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++R+E++ DR+ ALQ+LV KTD A++L+E V+Y+KFL+ QV VLS
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLS 220
Score = 48 (22.0 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 119 MEEDIGAAMQF--LQSKALCIMPIS 141
+EED + ++ L S+ LC+MPIS
Sbjct: 247 VEEDECSPRRYVDLSSRGLCLMPIS 271
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 180 RVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSM 229
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI +++RALQELVP CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 240 RRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 287
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 28/47 (59%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+ M
Sbjct: 269 RRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWM 315
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 153 (58.9 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 222 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 271
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 135 (52.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 24/46 (52%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 225 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
Score = 38 (18.4 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 101 PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKP 160
P W+ SND Q + L+ + + A + ++ + S + +Y+ Q P P
Sbjct: 342 PSWDASSNDSRFQ--SPLIPDPMSAFLA-CSTQPTTMEAYSRMATLYQQMQQQLPPPSNP 398
Query: 161 E 161
+
Sbjct: 399 K 399
>TAIR|locus:2090679 [details] [associations]
symbol:AT3G19500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025624 EMBL:AY084520 EMBL:AF488631 IPI:IPI00518921
RefSeq:NP_566639.1 UniGene:At.38400 ProteinModelPortal:Q9LT67
SMR:Q9LT67 EnsemblPlants:AT3G19500.1 GeneID:821484
KEGG:ath:AT3G19500 TAIR:At3g19500 eggNOG:NOG294378
HOGENOM:HOG000240890 OMA:HVENSNG PhylomeDB:Q9LT67
ProtClustDB:CLSN2688564 Genevestigator:Q9LT67 Uniprot:Q9LT67
Length = 270
Score = 117 (46.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+ ++R+ER+ +R+ ALQ+LV KTD A++L E + Y+KFL+ Q++VL
Sbjct: 152 IAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVL 200
Score = 50 (22.7 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 122 DIGAAMQF--LQSKALCIMPISLASAIYRTRQPD--APAFVKPESSTPS 166
D+ AAM+ L+S+ LC++P+S + + D +PA + +++PS
Sbjct: 218 DVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWSPATMG-HTTSPS 265
>TAIR|locus:2141216 [details] [associations]
symbol:B70 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50805 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:EF637083 EMBL:AL031187 EMBL:EF182720
EMBL:AY065362 EMBL:AY122937 IPI:IPI00529333 PIR:T05176
RefSeq:NP_193865.2 UniGene:At.28517 ProteinModelPortal:Q8VZ22
SMR:Q8VZ22 EnsemblPlants:AT4G21340.1 GeneID:827884
KEGG:ath:AT4G21340 TAIR:At4g21340 eggNOG:NOG319921
HOGENOM:HOG000095220 OMA:NESRMIS PhylomeDB:Q8VZ22
ProtClustDB:CLSN2690318 Genevestigator:Q8VZ22 Uniprot:Q8VZ22
Length = 301
Score = 113 (44.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/44 (45%), Positives = 34/44 (77%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV 62
++R+E++ DR+ ALQ+LV KTD A++L + +DY+KFL+ Q+
Sbjct: 190 KVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQI 233
Score = 56 (24.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 96 GGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPIS 141
G Q +W S++ T Q + Q L+S+ LC+MPIS
Sbjct: 247 GSGEQKQWSDKSSNNTHNQNC--------SPRQDLRSRGLCLMPIS 284
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 26/46 (56%), Positives = 40/46 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR+RI +M+ LQ+LVP+ +KTD+A+MLDE++DY+K L+ QV+V+S
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMS 58
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 148 (57.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 115 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 161
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 151 (58.2 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 26/47 (55%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P C++TD+A++LDE +DY+K L++Q++V+ M
Sbjct: 268 RRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWM 314
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 144 (55.7 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 7 CHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
C + SL+ + RRERI +R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 161 CSKDTQSLY--AKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 218
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 148 (57.2 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 209 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 25/47 (53%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L++
Sbjct: 105 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 144 (55.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/50 (58%), Positives = 41/50 (82%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 152 RVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 201
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 143 (55.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+RALQELVPS K D MLD + YVKF+++Q++VL
Sbjct: 207 RRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVL 251
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 25/47 (53%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR++I + M+ALQEL+P C KTDR++MLD++++YVK L+ Q+++ SM
Sbjct: 289 RRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSM 335
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 143 (55.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 44 RRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 90
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 1 MAVCLCCHQQMF---SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKF 57
M+V C + S + + RR+RI +R+R LQEL+P+ K D + ML+E + YVKF
Sbjct: 103 MSVSKACKHSVSAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKF 162
Query: 58 LRLQVKVLS 66
L LQ+K+LS
Sbjct: 163 LHLQIKLLS 171
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 146 (56.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 144 (55.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 192 RLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLSM 241
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 142 (55.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 215 RRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 146 (56.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 368
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 145 (56.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 313
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 145 (56.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 29/50 (58%), Positives = 41/50 (82%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 317 RVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 143 (55.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER++DR+R LQ+LVP NK D A+MLDE Y+KFL+ QV+ L
Sbjct: 291 RLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 337
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 136 (52.9 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI DR++ LQ LVP+ K D + ML++ V YVKFL+LQ+K+LS
Sbjct: 150 RRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 143 (55.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 220 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 269
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 140 (54.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 26/48 (54%), Positives = 40/48 (83%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++RRERI++R++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 214 KVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 141 (54.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 28/50 (56%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 163 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 212
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 32/67 (47%), Positives = 41/67 (61%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXXX 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 284 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNG 343
Query: 81 XDVPLSS 87
D+ LSS
Sbjct: 344 MDIGLSS 350
>TAIR|locus:2083460 [details] [associations]
symbol:AT3G20640 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000241059 EMBL:AP002034 EMBL:AK118054 EMBL:BT008580
IPI:IPI00530194 RefSeq:NP_188700.1 UniGene:At.38202
ProteinModelPortal:Q8GXT3 SMR:Q8GXT3 EnsemblPlants:AT3G20640.1
GeneID:821611 KEGG:ath:AT3G20640 TAIR:At3g20640 eggNOG:NOG253493
InParanoid:Q8GXT3 OMA:YDQMASA PhylomeDB:Q8GXT3
ProtClustDB:CLSN2915619 Genevestigator:Q8GXT3 Uniprot:Q8GXT3
Length = 454
Score = 119 (46.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS
Sbjct: 346 RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALS 391
Score = 45 (20.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 SALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPIS 141
SAL + G+S + S+ TE +V++ E D L+S+ LC++P+S
Sbjct: 388 SALSNPYMKSGASLQHQQ--SDHSTELEVSE--EPD-------LRSRGLCLVPVS 431
>UNIPROTKB|Q657Z3 [details] [associations]
symbol:P0005A05.10 "Putative ethylene-responsive protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138 EMBL:AP002863
UniGene:Os.45859 KEGG:dosa:Os01t0105700-01 Uniprot:Q657Z3
Length = 387
Score = 116 (45.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ QV+ LS
Sbjct: 272 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQDQVETLS 319
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 125 AAMQFLQSKALCIMPISLASAI 146
AA L+S+ LC++P+S S +
Sbjct: 351 AAKLDLRSRGLCLVPLSCTSYV 372
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 136 (52.9 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRERI++R+R LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 157 RLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 203
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 140 (54.3 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 27/50 (54%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 141 (54.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 27/50 (54%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 239 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSM 288
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 134 (52.2 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R+R LQ LVP K D A+MLDE + YVKFL+ Q+++L+
Sbjct: 137 RRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLN 182
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 138 (53.6 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 141 (54.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 28/50 (56%), Positives = 42/50 (84%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 276 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 325
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 136 (52.9 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 26/48 (54%), Positives = 40/48 (83%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 201
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 135 (52.6 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
++RRERI++R+R LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 167 RMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 213
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 139 (54.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM LQ+LVP CN+ T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 209 RREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM 256
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 125 (49.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ+LVP K D A+MLDE +Y++FL+ Q++ L
Sbjct: 382 RRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIREL 426
Score = 37 (18.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 125 AAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPES 162
AAM + + A M S +S Y PAF PE+
Sbjct: 437 AAMS-INTAAATTMATS-SSPTYNNSNAAMPAFAFPET 472
>TAIR|locus:2199216 [details] [associations]
symbol:AT1G27660 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:BX814188 IPI:IPI00523952 PIR:F86401 RefSeq:NP_174087.1
UniGene:At.49924 ProteinModelPortal:Q9SFZ3 SMR:Q9SFZ3 PaxDb:Q9SFZ3
PRIDE:Q9SFZ3 EnsemblPlants:AT1G27660.1 GeneID:839658
KEGG:ath:AT1G27660 TAIR:At1g27660 eggNOG:NOG274631
HOGENOM:HOG000095222 InParanoid:Q9SFZ3 OMA:MKSSRNK PhylomeDB:Q9SFZ3
ProtClustDB:CLSN2679312 Genevestigator:Q9SFZ3 Uniprot:Q9SFZ3
Length = 453
Score = 118 (46.6 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ Q++ LS+
Sbjct: 332 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSV 380
Score = 43 (20.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 110 GTEQQVAKLMEEDIGAAMQFLQSKALCIMPIS 141
G Q+ +E + L+S+ LC++P+S
Sbjct: 391 GKASQLVSQSQEGDEEETRDLRSRGLCLVPLS 422
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 140 (54.3 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 293 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 342
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 136 (52.9 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 213 RRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 258
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 137 (53.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI+ YV+ L+ QV+ LSM
Sbjct: 196 RVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSM 245
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 136 (52.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 219 RRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 264
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 644 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 693
>UNIPROTKB|Q60EJ4 [details] [associations]
symbol:OSJNBa0017K09.4 "Os05g0501200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000142
HOGENOM:HOG000241059 EMBL:AC130597 RefSeq:NP_001055968.1
UniGene:Os.80283 EnsemblPlants:LOC_Os05g42180.1 GeneID:4339235
KEGG:osa:4339235 eggNOG:NOG235707 ProtClustDB:CLSN2695716
Uniprot:Q60EJ4
Length = 323
Score = 116 (45.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS
Sbjct: 210 KVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVASLS 257
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 130 LQSKALCIMPISLASAIYRTRQPDAPAFVKP 160
L+S+ LC++P++ + Y A F P
Sbjct: 289 LRSRGLCLVPVA---STYTVASETATEFWHP 316
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 136 (52.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXX 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM R
Sbjct: 203 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSM-RLAAVNPRIDF 261
Query: 80 XXDVPLSSALEGESIDGG---SSQPEWEKWSNDGTEQ 113
D L+S G +DG S + ++W DG Q
Sbjct: 262 NLDSILASE-NGSLMDGSFNAESYHQLQQWPFDGYHQ 297
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 234 RRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 279
>TAIR|locus:2195763 [details] [associations]
symbol:AT1G61660 "AT1G61660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC005882 EMBL:AF380649 EMBL:AY113072
EMBL:AY085602 EMBL:AF488630 IPI:IPI00521365 IPI:IPI00541480
PIR:A96642 RefSeq:NP_564782.1 RefSeq:NP_849836.1 UniGene:At.22850
ProteinModelPortal:Q94JL3 SMR:Q94JL3 IntAct:Q94JL3
EnsemblPlants:AT1G61660.1 GeneID:842462 KEGG:ath:AT1G61660
TAIR:At1g61660 eggNOG:NOG263728 HOGENOM:HOG000241059
InParanoid:Q94JL3 OMA:IQKDWSP PhylomeDB:Q94JL3
ProtClustDB:CLSN2688979 Genevestigator:Q94JL3 Uniprot:Q94JL3
Length = 393
Score = 113 (44.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++R+E + D++ +LQ+LV KTD A++L E ++Y+KFL QV VLS
Sbjct: 280 KVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLS 327
Score = 44 (20.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 99 SQPEWEKWSNDGTEQQVA-KLMEEDIGAAMQFLQSKALCIMPIS 141
S P ++ +++ +QQ++ K +D + L+ LC++PIS
Sbjct: 327 STPYMKQGASNQQQQQISGKSKSQDENENHE-LRGHGLCLVPIS 369
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 131 (51.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 137 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 130 (50.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXX 77
++RRE+I +R++ LQ+LVP C K A MLD I+DYV+ L+ Q++ LSM
Sbjct: 120 RVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYD 179
Query: 78 XXXXDVPLSSALEGESI 94
D+ + +G +I
Sbjct: 180 LNSLDIEPTDIFQGGNI 196
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 132 (51.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRE+I +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 185 RREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 230
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 131 (51.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 140 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 135 (52.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
RRERI++++R LQ LVP K D A+MLDE +Y+KFLR QVK L R
Sbjct: 287 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLR 335
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 134 (52.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>UNIPROTKB|Q94HA7 [details] [associations]
symbol:OSJNBb0048A17.16 "Os03g0759700 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 eggNOG:NOG294378
EMBL:AC084282 EMBL:AK072833 RefSeq:NP_001051340.1 UniGene:Os.51847
EnsemblPlants:LOC_Os03g55220.1 EnsemblPlants:LOC_Os03g55220.2
GeneID:4334181 KEGG:osa:4334181 OMA:PTTECSS ProtClustDB:CLSN2694316
Uniprot:Q94HA7
Length = 317
Score = 112 (44.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++RRER+ +R+ ALQ+LV K+D A++L E + Y++FL QV+VLS
Sbjct: 159 RVRRERLGERIIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLS 206
Score = 44 (20.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 101 PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPIS 141
PE E+ E+Q L D L+S+ LC++PIS
Sbjct: 220 PEQER-GTPAAEEQPPALRPSD-------LRSRGLCLVPIS 252
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 131 (51.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E + YVKFL+LQ+K+LS
Sbjct: 239 RRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLS 284
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 130 (50.8 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RRERI R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+KV
Sbjct: 228 RRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKV 271
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 129 (50.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 24/48 (50%), Positives = 39/48 (81%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+++M ALQ+++P CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 171 RREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSM 218
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 125 (49.1 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER++ RMRALQ LVP + D A+ML+E + YVKFL+ V+ L
Sbjct: 130 RLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSL 176
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ +K T+ A MLD VDY+K L+ QVK L+ SR
Sbjct: 85 RVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSR 136
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
V + RRERI++++R L+ +VP K D A+MLDE + Y KFL+ QV++L
Sbjct: 126 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 129 (50.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 21/46 (45%), Positives = 41/46 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
R E+++++MR LQ+LVP+C+KTD+ ++LD+ ++Y+K L+LQ++++S
Sbjct: 146 RDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS 191
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 118 (46.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 19/43 (44%), Positives = 34/43 (79%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RRE+I ++M+ LQ+L+P CNK+ + + LD+ ++YVK L+ Q++
Sbjct: 267 RREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQ 309
Score = 35 (17.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 149 TRQPDAPAFVKPES 162
+ QP PA++ P S
Sbjct: 388 SNQPQFPAYMNPYS 401
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 129 (50.5 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 20/42 (47%), Positives = 35/42 (83%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV 62
RRE+I +RM+ LQ+L+P CNK+ + +ML+++++YVK L +Q+
Sbjct: 162 RREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQI 203
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 131 (51.2 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 313 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
>UNIPROTKB|Q75IG3 [details] [associations]
symbol:P0499F10.3 "Putative uncharacterized protein
P0499F10.3" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
ProtClustDB:CLSN2691249 EMBL:AC132487 RefSeq:NP_001054971.2
UniGene:Os.10063 EnsemblPlants:LOC_Os05g14010.1 GeneID:4338155
KEGG:osa:4338155 Uniprot:Q75IG3
Length = 268
Score = 127 (49.8 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXX 77
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS
Sbjct: 123 LKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALSYPYMGDANGTG 182
Query: 78 XXXXDVPLSSALEGESIDGGSSQPEWEKWSNDG-TEQQVAKLMEEDIGA---AMQFLQSK 133
P+ + GE G + + +++G T Q E GA + L+S+
Sbjct: 183 ------PMQNGPVGERNPGLFPEYPGQLLNHNGNTGAQQPAAQPEQQGANDDGKKDLRSR 236
Query: 134 ALCIMPISLAS 144
LC++P+S S
Sbjct: 237 GLCLVPVSCTS 247
>UNIPROTKB|Q5NB28 [details] [associations]
symbol:P0485D09.22 "Os01g0230200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 HOGENOM:HOG000005841 EMBL:AP001550
EMBL:AP001859 EMBL:AK065732 RefSeq:NP_001042492.2 UniGene:Os.38009
EnsemblPlants:LOC_Os01g13000.1 GeneID:4325885 KEGG:osa:4325885
ProtClustDB:CLSN2691249 Uniprot:Q5NB28
Length = 406
Score = 130 (50.8 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXX 77
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS
Sbjct: 255 LKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLGQIEALSYPYLGQCCSAN 314
Query: 78 XXXXDVPLSSALEGE-SIDGGSSQ-PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKAL 135
+ + GE S DG + P + DG +QQ K ++D L+S+ L
Sbjct: 315 PMQQQTGI---MAGERSTDGLFPEFPAGQDAEKDGKKQQAKK--DDD-------LRSRGL 362
Query: 136 CIMPIS 141
C++P+S
Sbjct: 363 CLVPVS 368
>UNIPROTKB|Q7X7U7 [details] [associations]
symbol:OSJNBb0091E11.4 "OJ990528_30.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008210
EMBL:CM000141 EMBL:AL606629 EMBL:AK059273 EMBL:AK101636
EMBL:AL662938 RefSeq:NP_001053182.1 UniGene:Os.55009
EnsemblPlants:LOC_Os04g41570.1 EnsemblPlants:LOC_Os04g41570.2
EnsemblPlants:LOC_Os04g41570.3 GeneID:4336261 KEGG:osa:4336261
eggNOG:NOG241248 OMA:SKGLCLV Uniprot:Q7X7U7
Length = 156
Score = 106 (42.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++++I +R+ ALQ+LV KTD A++L E Y+KFL Q++VLS
Sbjct: 55 KKDKIGERVAALQQLVSPFGKTDTASVLQEASGYIKFLHQQLEVLS 100
Score = 38 (18.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 130 LQSKALCIMPISLASAIYRTRQPD--APA 156
L+++ LC++P+ + ++ D APA
Sbjct: 122 LRNRGLCLVPVDQTLQLTQSNGADLWAPA 150
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 130 (50.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+ +MRALQ+L+P+C K D+A++LDE + Y++ L+LQV+++SM
Sbjct: 241 RRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 124 (48.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 23/46 (50%), Positives = 38/46 (82%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVL 65
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ +
Sbjct: 146 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RR +I +R++ LQ++VP C KT A MLDEI++YV+ L+ QV+ LSM
Sbjct: 163 RVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSM 212
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E V+YVK L+ Q++ L+
Sbjct: 200 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 248
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 123 (48.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQELVP+ +K T+ + MLD VDY+K L+ Q K+L+ +R
Sbjct: 295 RVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNR 346
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 120 (47.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E V+YVK L+ Q++ L+
Sbjct: 197 RVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELT 245
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 119 (46.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RR +I +R+R LQ++VP C K A MLDEI++YV+ L+ QV+ LSM
Sbjct: 161 RVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSM 210
>TAIR|locus:2007263 [details] [associations]
symbol:AT1G49830 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
SMART:SM00353 EMBL:CP002684 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00544298 RefSeq:NP_175405.2 UniGene:At.52101
ProteinModelPortal:F4I3E6 SMR:F4I3E6 EnsemblPlants:AT1G49830.1
GeneID:841406 KEGG:ath:AT1G49830 OMA:HETMGYI Uniprot:F4I3E6
Length = 250
Score = 108 (43.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 6 CCHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
C Q S ++++E++ +++ LQ LV KTD A++L E + Y+KFL+ QV+VL
Sbjct: 111 CKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTDAASVLHETMGYIKFLQDQVQVL 170
Query: 66 S 66
S
Sbjct: 171 S 171
Score = 41 (19.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 130 LQSKALCIMPISLASAIYRTRQPD--APAFVKPESS 163
L+S LC++P++ + T D + A + P +S
Sbjct: 197 LRSNGLCLVPLAWTVHVANTNGADLWSSAILSPLTS 232
>TAIR|locus:2177649 [details] [associations]
symbol:AT5G64980 "AT5G64980" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB019236 EMBL:BT029204
IPI:IPI00529046 RefSeq:NP_201303.1 UniGene:At.28927
ProteinModelPortal:Q9LV80 SMR:Q9LV80 PRIDE:Q9LV80
EnsemblPlants:AT5G64980.1 GeneID:836622 KEGG:ath:AT5G64980
TAIR:At5g64980 OMA:YTNERER PhylomeDB:Q9LV80 ProtClustDB:CLSN2916260
Genevestigator:Q9LV80 Uniprot:Q9LV80
Length = 344
Score = 119 (46.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXX 79
R++RIAD ++AL +L+P + D + L+ +VD+VK L LQ+K LS SR
Sbjct: 229 RKQRIADNIKALGKLLPHKVEGDNHELTLNAMVDHVKLLHLQMKELSRSRLGGE------ 282
Query: 80 XXDVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMP 139
P+S + I+G E+ E+ + L+ +D AA L+SK L + P
Sbjct: 283 ----PISHPMA--FIEGYGHYIHHEQTMAKSLEEVMEDLLTKDFDAAANLLESKGLYLTP 336
Query: 140 IS 141
+S
Sbjct: 337 LS 338
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 119 (46.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 20/47 (42%), Positives = 38/47 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI RMR LQ+L+P+ +K D+ ++LD++++++K L+ QV+ +S+
Sbjct: 178 RRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSL 224
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 114 (45.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR RI+DR R L+ LVP +K D +ML++ + YVKFL+ Q+ +
Sbjct: 64 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISL 107
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 14 LFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
LF RR +I +R R LQ LVP C+K+++A+ LD+ + Y+K L+ Q+K +S+
Sbjct: 219 LFTKFHRRRFKITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSV 272
>TAIR|locus:2061609 [details] [associations]
symbol:AT2G20100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006081
HOGENOM:HOG000005841 EMBL:AJ577588 EMBL:AK221525 IPI:IPI00530302
IPI:IPI00570541 PIR:H84584 RefSeq:NP_001077923.1 RefSeq:NP_179600.2
UniGene:At.48494 ProteinModelPortal:Q7XHI5 SMR:Q7XHI5
EnsemblPlants:AT2G20100.1 GeneID:816529 KEGG:ath:AT2G20100
TAIR:At2g20100 eggNOG:NOG295752 InParanoid:Q7XHI5 OMA:GSSFANK
PhylomeDB:Q7XHI5 ProtClustDB:CLSN2681156 Genevestigator:Q7XHI5
Uniprot:Q7XHI5
Length = 362
Score = 104 (41.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/50 (36%), Positives = 35/50 (70%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
+++R+E++ R+ +L +LV KTD A++L E + Y++FL Q++ LS+
Sbjct: 218 LKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSL 267
Score = 53 (23.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 107 SNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQPD--APAF 157
S T+ Q + EE M+ L+S+ LC++PIS + D APAF
Sbjct: 309 SLSSTDNQKSNPNEEP----MKDLRSRGLCLVPISCTLQVGSDNGADYWAPAF 357
>UNIPROTKB|Q6K7V4 [details] [associations]
symbol:P0017G06.33 "Ethylene-responsive family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004770
EMBL:AP005536 KEGG:dosa:Os02t0276900-01 Uniprot:Q6K7V4
Length = 397
Score = 109 (43.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
V++R+E++ DR+ AL +LV KTD A++L E + Y++FL Q++ LS
Sbjct: 236 VKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHGQIEALS 284
Score = 41 (19.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 130 LQSKALCIMPIS 141
L+S+ LC++P+S
Sbjct: 359 LRSRGLCLVPVS 370
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 114 (45.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 19 QLRRERIADRMRALQELVPSCN-KTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR +I++RMR LQ+LVP+ + +T+ A MLD V Y+K L+ QVK L SR
Sbjct: 320 RVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESR 371
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 29 MRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
MR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 40
>TAIR|locus:2031978 [details] [associations]
symbol:AT1G05710 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 ProtClustDB:CLSN2687695 EMBL:AY072363
EMBL:BT006558 IPI:IPI00544028 RefSeq:NP_849597.1 UniGene:At.42378
UniGene:At.72027 ProteinModelPortal:Q8VY82 IntAct:Q8VY82
PRIDE:Q8VY82 EnsemblPlants:AT1G05710.2 GeneID:837078
KEGG:ath:AT1G05710 TAIR:At1g05710 InParanoid:Q8VY82 OMA:MENTVGV
PhylomeDB:Q8VY82 ArrayExpress:Q8VY82 Genevestigator:Q8VY82
Uniprot:Q8VY82
Length = 171
Score = 101 (40.6 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 14 LFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
L F + R++++ +R+ ALQ++V KTD A++L + + Y++FL QVKV S
Sbjct: 32 LSFSSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVCS 84
Score = 37 (18.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 130 LQSKALCIMPISLASAIYRTRQPDAPAFVK 159
L+++ LC++P+ + ++ D A VK
Sbjct: 126 LRNRGLCLVPMENTVGVAQSNGADIWAPVK 155
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 116 (45.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV 62
RR RI+DR + LQ +VP K D +MLDE + YVKFL+ Q+
Sbjct: 55 RRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>TAIR|locus:2119901 [details] [associations]
symbol:AT4G29100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078470
EMBL:AL161574 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488634 EMBL:AY081316
EMBL:BT000121 IPI:IPI00517615 PIR:T08965 RefSeq:NP_194639.1
UniGene:At.3408 ProteinModelPortal:Q8S3D1 SMR:Q8S3D1 PRIDE:Q8S3D1
EnsemblPlants:AT4G29100.1 GeneID:829031 KEGG:ath:AT4G29100
TAIR:At4g29100 eggNOG:NOG272582 HOGENOM:HOG000005841
InParanoid:Q9SZD9 OMA:PDRSSEC PhylomeDB:Q8S3D1
ProtClustDB:CLSN2915796 Genevestigator:Q8S3D1 Uniprot:Q8S3D1
Length = 407
Score = 106 (42.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
+++R+E++ R+ AL +LV KTD A++L E + Y++FL+ Q++ LS
Sbjct: 262 LKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALS 310
Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 130 LQSKALCIMPISLASAIYRTRQPD--APA 156
L+S+ LC++PIS + D APA
Sbjct: 372 LRSRGLCLVPISCTLQVGSDNGADYWAPA 400
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 21 RRERIADRMRALQELVPS-CNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+ I D++ LQ L+P+ C K D A+ L+ I++Y+K L+ QV V+SM+
Sbjct: 79 RRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVDVMSMA 127
>UNIPROTKB|Q8L4Y9 [details] [associations]
symbol:OJ1103_E04.128 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P04933
EMBL:AP003806 EMBL:AP004347 Uniprot:Q8L4Y9
Length = 434
Score = 96 (38.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
+++ + ++ D++ ALQ++V KTD A++L E ++Y+K+L QV++LS
Sbjct: 320 LKVPKVKLGDKITALQQIVSPFGKTDTASVLYEAINYIKWLHEQVQLLS 368
Score = 56 (24.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 130 LQSKALCIMPISLASAIYRTRQ-PD 153
L+S+ LC++P+S +YR PD
Sbjct: 398 LRSRGLCLVPVSCTPQVYRDNNGPD 422
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 104 (41.7 bits), Expect = 0.00034, P = 0.00034
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 21 RRERIADRMRALQELVPSC-NKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR +I +R R LQ LVP C NK+++A+ LD+ + Y+K L+ Q++ S
Sbjct: 94 RRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEATS 140
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 104 (41.7 bits), Expect = 0.00061, P = 0.00061
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
+R I +MR LQ L+P+ +K D +MLDE ++Y+ L+LQV++++M
Sbjct: 200 QRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTM 246
>UNIPROTKB|Q75KP4 [details] [associations]
symbol:OSJNBa0065F09.5 "Expressed protein (With alternative
splicing)" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 EMBL:AC099323 EMBL:AK065674
RefSeq:NP_001050282.1 UniGene:Os.59384
EnsemblPlants:LOC_Os03g27390.1 EnsemblPlants:LOC_Os03g27390.2
GeneID:4333025 KEGG:osa:4333025 OMA:SARPDHS ProtClustDB:CLSN2693978
Uniprot:Q75KP4
Length = 315
Score = 103 (41.3 bits), Expect = 0.00066, P = 0.00066
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI + + AL+++VP D A+LDE + Y+K+L+L+VK L
Sbjct: 266 RRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 310
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 94 (38.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLR 59
RRERI + L+ LVPS ++ D+AA+L E+V YV+ LR
Sbjct: 39 RRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
Score = 36 (17.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 90 EGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAA 126
EG+ + + E E S D E+Q A+ ++ + A
Sbjct: 90 EGDEVVVEEEEVEVEGCSCDAGERQAARRVKASVCCA 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 166 154 0.00088 105 3 11 22 0.45 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 114
No. of states in DFA: 581 (62 KB)
Total size of DFA: 141 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.91u 0.07s 14.98t Elapsed: 00:00:02
Total cpu time: 14.91u 0.07s 14.98t Elapsed: 00:00:02
Start: Mon May 20 17:23:23 2013 End: Mon May 20 17:23:25 2013
WARNINGS ISSUED: 1