BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040019
(166 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/149 (85%), Positives = 139/149 (93%), Gaps = 2/149 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ
Sbjct: 179 RLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 238
Query: 79 LVADVPLSSALEGESIDGGS-SQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
LVADVPL+S +EGESIDG + +Q WEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI
Sbjct: 239 LVADVPLAS-VEGESIDGAAANQQTWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 297
Query: 138 MPISLASAIYRTRQPDAPAFVKPESSTPS 166
MPISLASAI RT PDAP+ +KPES+TPS
Sbjct: 298 MPISLASAILRTHPPDAPSIIKPESNTPS 326
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/147 (83%), Positives = 134/147 (91%), Gaps = 1/147 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 74 RLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 133
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPLSS +EGE I+ G++Q WEKWS+DGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 134 LVADVPLSS-VEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 192
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTP 165
PISLASAI+RT Q D VKPE +TP
Sbjct: 193 PISLASAIFRTHQADPQILVKPEMNTP 219
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 248 bits (632), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/147 (83%), Positives = 134/147 (91%), Gaps = 1/147 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 173 RLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 232
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPLSS +EGE I+ G++Q WEKWS+DGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 233 LVADVPLSS-VEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 291
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTP 165
PISLASAI+RT Q D VKPE +TP
Sbjct: 292 PISLASAIFRTHQADPQILVKPEMNTP 318
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/148 (82%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 185 RLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 244
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPL S +EG+ +GGS+Q WEKWS DGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 245 LVADVPLLS-IEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 303
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLASAI+RT QP+ VKPES PS
Sbjct: 304 PISLASAIFRTHQPEPSTLVKPESDAPS 331
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/148 (80%), Positives = 135/148 (91%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRR RI +R++ALQELVP+CNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ
Sbjct: 36 RLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 95
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPLSS ++GE I+GG++Q WE WSNDGTEQ+VAKLMEED+GAAMQ LQSKALCIM
Sbjct: 96 LVADVPLSS-VQGEGIEGGANQQAWENWSNDGTEQEVAKLMEEDVGAAMQLLQSKALCIM 154
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
P+SLASAI+R R P+AP VKPES+ PS
Sbjct: 155 PVSLASAIFRARPPNAPTLVKPESNPPS 182
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/148 (82%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 115 RLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 174
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPL S +EG+ +GGS+Q WEKWS DGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 175 LVADVPLLS-IEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 233
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLASAI+RT QP+ VKPES PS
Sbjct: 234 PISLASAIFRTHQPEPSTLVKPESDAPS 261
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/148 (79%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 167 RLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 226
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PL A+EGE+ +GGS+Q W+KWSNDGTE++VAKLMEED+GAAMQFLQSKALCIM
Sbjct: 227 LVADIPLP-AVEGETGEGGSNQQAWDKWSNDGTEREVAKLMEEDVGAAMQFLQSKALCIM 285
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA+AIY Q D P +KPE + PS
Sbjct: 286 PISLAAAIYPAHQTDTPTLIKPEPNAPS 313
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/146 (82%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVPS NK+DRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 196 RLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 255
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPL SA+EGE I+GG+S+ W KWSNDGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 256 LVADVPL-SAVEGEDIEGGASEQAWSKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 314
Query: 139 PISLASAIYRTRQPDAPAFVKPESST 164
PISLASAI+R Q +A +KPES +
Sbjct: 315 PISLASAIFRMPQSEASTTIKPESDS 340
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/148 (79%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 191 RLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 250
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PL A+EGE+ +GGS+Q W+KWSNDGTE++VAKLMEED+GAAMQFLQSKALCIM
Sbjct: 251 LVADIPLP-AVEGETGEGGSNQQAWDKWSNDGTEREVAKLMEEDVGAAMQFLQSKALCIM 309
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA+AIY Q D P +KPE + PS
Sbjct: 310 PISLAAAIYPAHQTDTPTLIKPEPNAPS 337
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/148 (77%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRR RI +R++ALQELVP+CNKTDRAAMLDEIVDYVKFLRLQ+KVLSMSRLGAAGAVAQ
Sbjct: 32 RLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQIKVLSMSRLGAAGAVAQ 91
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPLSS ++GE +GG++Q WE WSND TEQ+VAKLMEED+GAAMQFLQSKALCIM
Sbjct: 92 LVADVPLSS-IKGEGNEGGANQQSWENWSNDDTEQEVAKLMEEDVGAAMQFLQSKALCIM 150
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLASAI+R R P+A + ES+TPS
Sbjct: 151 PISLASAIFRARPPNASTLINTESNTPS 178
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 130/146 (89%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 185 RLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 244
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPLS+ + I+GG+++ W+KWSNDGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 245 LVADVPLSAVEGDQDIEGGANEQAWDKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 304
Query: 139 PISLASAIYRTRQPDAPAFVKPESST 164
PI LASAI+R Q +A +KPES++
Sbjct: 305 PIPLASAIFRMPQSEASTGIKPESNS 330
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 130/146 (89%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 182 RLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQ 241
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVADVPLS+ + I+G S++ W+KWSNDGTEQQVAKLMEED+GAAMQFLQSKALCIM
Sbjct: 242 LVADVPLSAVEGDQDIEGVSNEQAWDKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIM 301
Query: 139 PISLASAIYRTRQPDAPAFVKPESST 164
PISLAS+I+R Q +A +KPES++
Sbjct: 302 PISLASSIFRMPQSEASTGIKPESNS 327
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 128/148 (86%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 140 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 199
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PLS ++GE+ D GS Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 200 LVADIPLS--VKGEASDSGSKQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMM 257
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+ VKPE +TPS
Sbjct: 258 PISLAMAIYDTQHSQDGQPVKPEPNTPS 285
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQ+LVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 197 RLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 256
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+P+S ++GE+ D GS Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 257 LVADIPIS--VKGEASDSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMM 314
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+ VKPE +TPS
Sbjct: 315 PISLAMAIYDTQHSQDGHSVKPEPNTPS 342
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQ+LVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 148 RLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 207
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+P+S ++GE+ D GS Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 208 LVADIPIS--VKGEASDSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMM 265
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+ VKPE +TPS
Sbjct: 266 PISLAMAIYDTQHSQDGHSVKPEPNTPS 293
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/148 (77%), Positives = 127/148 (85%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRA MLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 138 RLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 197
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PLS ++GE+ D GS Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 198 LVADIPLS--VKGEASDSGSKQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMM 255
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+ VKPE +TPS
Sbjct: 256 PISLAMAIYDTQHSQDGQPVKPEPNTPS 283
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/149 (77%), Positives = 130/149 (87%), Gaps = 3/149 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 131 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 190
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PLS ++GE+ D GS+Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 191 LVADIPLS--VKGEASDSGSTQHIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMM 248
Query: 139 PISLASAIYRTRQP-DAPAFVKPESSTPS 166
PISLA AIY T+ D + +KPE +T S
Sbjct: 249 PISLAMAIYDTQHSQDGHSLMKPEPNTSS 277
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/148 (77%), Positives = 128/148 (86%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 149 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 208
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PLS ++GE+ D G +Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 209 LVADIPLS--VKGEASDSGGNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMM 266
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+Q VK E +TPS
Sbjct: 267 PISLAMAIYDTQQTQDGQPVKHEPNTPS 294
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/148 (77%), Positives = 128/148 (86%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 149 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 208
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PLS ++GE+ D G +Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 209 LVADIPLS--VKGEASDSGGNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMM 266
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+Q VK E +TPS
Sbjct: 267 PISLAMAIYDTQQTQDGQPVKHEPNTPS 294
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 2/148 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLS+SRLG AGAVAQ
Sbjct: 149 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSISRLGGAGAVAQ 208
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PLS ++GE+ D G +Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 209 LVADIPLS--VKGEASDSGGNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMM 266
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+Q VK E +TPS
Sbjct: 267 PISLAMAIYDTQQTQDGQPVKHEPNTPS 294
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/148 (74%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERI++R++ALQELVPSCNKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG A AVAQ
Sbjct: 157 RLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQ 216
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PL S +EG+S + S+Q W+KWSN TEQ+VAKLMEED+GAAMQ+LQSK+LCIM
Sbjct: 217 LVADIPLQS-VEGDSGESRSNQRIWDKWSNVDTEQEVAKLMEEDVGAAMQYLQSKSLCIM 275
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA+ IY T+QPD VKPE++ PS
Sbjct: 276 PISLAALIYPTQQPDDQLLVKPEAAAPS 303
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/135 (79%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 166 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VED 224
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E+ +GG +QP WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLA+AIY T+
Sbjct: 225 ETGEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQA 284
Query: 152 PDAPAFVKPESSTPS 166
PD VKPE++ PS
Sbjct: 285 PDTSTIVKPETNPPS 299
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/148 (72%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERI++R++ALQELVPSCNKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG A AVAQ
Sbjct: 158 RLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQ 217
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD+PL S +EG+S + S+Q W+KWSN TE++VAKLMEED+GAAMQ+LQSK+LCIM
Sbjct: 218 LVADIPLQS-VEGDSGESRSNQHIWDKWSNVDTEREVAKLMEEDVGAAMQYLQSKSLCIM 276
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA+ IY T+ PD + VKPE++ PS
Sbjct: 277 PISLAALIYPTQLPDDQSLVKPEAAAPS 304
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 119/134 (88%), Gaps = 1/134 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 183 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEE 241
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +GG +QP W+KWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY T+
Sbjct: 242 EGSEGGRNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQP 301
Query: 152 PDAPAFVKPESSTP 165
PD+ + VKPES+ P
Sbjct: 302 PDSSSVVKPESNPP 315
>gi|224082728|ref|XP_002306815.1| predicted protein [Populus trichocarpa]
gi|222856264|gb|EEE93811.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/151 (78%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
F QLRRERIA+R+RALQELVPS NKTDRA MLDEIVDYVKFLRLQVKVLSMSRLG AGA
Sbjct: 36 FWAQLRRERIAERIRALQELVPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGA 95
Query: 76 VAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKAL 135
VA LV D+PLSS +E E+ +GG +QP WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKAL
Sbjct: 96 VAPLVTDIPLSS-VEDETGEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKAL 154
Query: 136 CIMPISLASAIYRTRQPDAPAFVKPESSTPS 166
CIMPISLA+AIY T+ PD VKPE++ PS
Sbjct: 155 CIMPISLATAIYHTQPPDTTTIVKPETNPPS 185
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 120/135 (88%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PL+S +E
Sbjct: 156 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLAS-VEE 214
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E+ +GG ++P WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY ++Q
Sbjct: 215 EASEGGRNEPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQQ 274
Query: 152 PDAPAFVKPESSTPS 166
PD +KP+++ PS
Sbjct: 275 PDTTPLIKPQTNPPS 289
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 122/140 (87%), Gaps = 8/140 (5%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 132 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 191
Query: 79 LVADVPLSSALEGESIDGGSSQPE------WEKWSNDGTEQQVAKLMEEDIGAAMQFLQS 132
LVAD+PLS ++GE+ DGG + + WEKWS DGTE+QVAKLMEEDIGAAMQFLQS
Sbjct: 192 LVADIPLS--VKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDIGAAMQFLQS 249
Query: 133 KALCIMPISLASAIYRTRQP 152
KALC+MP+SLA AIY T+ P
Sbjct: 250 KALCMMPVSLAMAIYDTQHP 269
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/148 (75%), Positives = 124/148 (83%), Gaps = 1/148 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 142 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 201
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
L+AD+PLS E E+ D G Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+M
Sbjct: 202 LIADIPLSVKGE-EASDSGGKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMM 260
Query: 139 PISLASAIYRTRQPDAPAFVKPESSTPS 166
PISLA AIY T+ +KPE ++ S
Sbjct: 261 PISLAMAIYDTQHLQDGHSMKPEPNSHS 288
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 129/156 (82%), Gaps = 10/156 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RMRALQELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQ
Sbjct: 40 RLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQ 99
Query: 79 LVADVPLSSALEGESIDGGSSQPE------WEKWSNDGTEQQVAKLMEEDIGAAMQFLQS 132
LVAD+PLS ++GE+ DGG + + WEKWS DGTE+QVAKLMEEDIGAAMQFLQS
Sbjct: 100 LVADIPLS--VKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDIGAAMQFLQS 157
Query: 133 KALCIMPISLASAIYRTRQP-DAPAF-VKPESSTPS 166
KALC+MP+SLA AIY T+ P D +KPE + S
Sbjct: 158 KALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS 193
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 120/135 (88%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 164 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEE 222
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +G ++P W+KWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY+++
Sbjct: 223 EGGEGARNRPAWDKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQP 282
Query: 152 PDAPAFVKPESSTPS 166
PD+ + VKPE++ PS
Sbjct: 283 PDSSSMVKPETNPPS 297
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 159 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEE 217
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +G ++P W+KWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY+++
Sbjct: 218 EGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQP 277
Query: 152 PDAPAFVKPESSTPS 166
PD + VKPE++ PS
Sbjct: 278 PDTSSIVKPETNPPS 292
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/135 (76%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVK+LSMSRLG AGAVA LV D+PLS +E
Sbjct: 167 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKILSMSRLGGAGAVAPLVTDIPLSP-VED 225
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E+ +GG +Q WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPI+LA+AIY T+
Sbjct: 226 ETGEGGRNQLAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPITLATAIYHTQP 285
Query: 152 PDAPAFVKPESSTPS 166
PD VKPE++ PS
Sbjct: 286 PDTTTIVKPETNPPS 300
>gi|115470903|ref|NP_001059050.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|113610586|dbj|BAF20964.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|215694864|dbj|BAG90055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 136
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/138 (76%), Positives = 118/138 (85%), Gaps = 2/138 (1%)
Query: 29 MRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSA 88
MRALQ+LVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQLVAD+P+S
Sbjct: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPIS-- 58
Query: 89 LEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYR 148
++GE+ D GS Q WEKWS DGTE+QVAKLMEEDIGAAMQFLQSKALC+MPISLA AIY
Sbjct: 59 VKGEASDSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYD 118
Query: 149 TRQPDAPAFVKPESSTPS 166
T+ VKPE +TPS
Sbjct: 119 TQHSQDGHSVKPEPNTPS 136
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 118/135 (87%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS++E
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 234
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ DGG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AIY ++
Sbjct: 235 ETGDGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 294
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 295 PPDTSSVVKPETNPP 309
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 116/134 (86%), Gaps = 1/134 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 149 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEE 207
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E D G +QP WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY+++
Sbjct: 208 EGSDSGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQP 267
Query: 152 PDAPAFVKPESSTP 165
D + VKPE+ P
Sbjct: 268 SDNSSIVKPETIPP 281
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 118/135 (87%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 159 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEE 217
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +G ++P W+KWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY+++
Sbjct: 218 EGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQP 277
Query: 152 PDAPAFVKPESSTPS 166
PD + VK E+S PS
Sbjct: 278 PDTSSIVKHETSPPS 292
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 116/134 (86%), Gaps = 1/134 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS +E
Sbjct: 152 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEE 210
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E D G +QP WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLASAIY+++
Sbjct: 211 EGSDSGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQP 270
Query: 152 PDAPAFVKPESSTP 165
D + VKPE+ P
Sbjct: 271 SDNSSIVKPETIPP 284
>gi|195649667|gb|ACG44301.1| BHLH transcription factor [Zea mays]
Length = 136
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/138 (76%), Positives = 117/138 (84%), Gaps = 2/138 (1%)
Query: 29 MRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSA 88
MRALQELVP+ NKTDRA MLDEI+DYVKFLRLQVKVLSMSRLG AGAVAQLVAD+PLS
Sbjct: 1 MRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS-- 58
Query: 89 LEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYR 148
++GE+ D GS Q WEKWS DGTE+Q+AKLMEEDIGAAMQFLQSKALC+MPISLA AIY
Sbjct: 59 VKGEASDSGSKQQIWEKWSTDGTERQIAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYD 118
Query: 149 TRQPDAPAFVKPESSTPS 166
T+ VKPE +TPS
Sbjct: 119 TQHSQDGQPVKPEPNTPS 136
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 118/135 (87%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS++E
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 234
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ +GG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AIY ++
Sbjct: 235 ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 294
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 295 PPDTSSVVKPENNPP 309
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 118/135 (87%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS++E
Sbjct: 112 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 171
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ +GG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AIY ++
Sbjct: 172 ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 231
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 232 PPDTSSVVKPENNPP 246
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG GAVA LV D+PLSS++E
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGVGAVAPLVTDMPLSSSVED 234
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ +GG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AIY ++
Sbjct: 235 ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 294
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 295 PPDTSSVVKPENNPP 309
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS++E
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 234
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ DGG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AI ++
Sbjct: 235 ETSDGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAICHSQ 294
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 295 PPDTSSVVKPETNPP 309
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS++
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVXD 234
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ +GG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AIY ++
Sbjct: 235 ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 294
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 295 PPDTSSVVKPENNPP 309
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 116/137 (84%), Gaps = 6/137 (4%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALE- 90
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS E
Sbjct: 151 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEE 210
Query: 91 -GESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRT 149
GE G +QP WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMP+SLASAIY++
Sbjct: 211 GGE----GRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQS 266
Query: 150 RQPDAPAFVKPESSTPS 166
+ + VKPE++ PS
Sbjct: 267 QPSGTSSIVKPETNPPS 283
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 122/143 (85%), Gaps = 1/143 (0%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERI++R++ALQELVP+CNKTDRAA++DEI+DYVKFLRLQVKVLSMSRLG AVAQ
Sbjct: 150 RLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQVKVLSMSRLGGTSAVAQ 209
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LV D+PL S +EG+S + S+Q WEKWS+ TEQ+VAKLM ED+G AMQ+LQSK+LCIM
Sbjct: 210 LVTDIPLQS-VEGDSCESRSNQHVWEKWSDSETEQEVAKLMGEDVGTAMQYLQSKSLCIM 268
Query: 139 PISLASAIYRTRQPDAPAFVKPE 161
P+SLA+ IY T+Q D + VKP+
Sbjct: 269 PVSLAALIYPTQQTDDQSMVKPD 291
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 109/135 (80%), Gaps = 11/135 (8%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVPS NKTDRA MLDEIVDYVKFLRLQVKVLSMSRLG AGAVA L
Sbjct: 152 LQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLE----------- 200
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +GG +QP WEKWSNDGTE+QVAKLMEE+IGAAMQFLQSKALCIMPISLASAIY+++
Sbjct: 201 EGGEGGRNQPAWEKWSNDGTEKQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQP 260
Query: 152 PDAPAFVKPESSTPS 166
+ + VKPE+S PS
Sbjct: 261 SENSSIVKPETSPPS 275
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 114/136 (83%), Gaps = 7/136 (5%)
Query: 31 ALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALE 90
+LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV ++PLSS++E
Sbjct: 172 SLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE 231
Query: 91 GESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E +Q WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALCIMPISLA AIY ++
Sbjct: 232 DE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQ 285
Query: 151 QPD-APAFVKPESSTP 165
PD + + VKPE + P
Sbjct: 286 PPDTSSSIVKPEMNPP 301
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 114/136 (83%), Gaps = 7/136 (5%)
Query: 31 ALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALE 90
+LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV ++PLSS++E
Sbjct: 167 SLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE 226
Query: 91 GESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E +Q WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALCIMPISLA AIY ++
Sbjct: 227 DE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQ 280
Query: 151 QPD-APAFVKPESSTP 165
PD + + VKPE + P
Sbjct: 281 PPDTSSSIVKPEMNPP 296
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 112/135 (82%), Gaps = 7/135 (5%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV ++PLSS+ E
Sbjct: 177 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSTED 236
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +Q WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALCIMPISLA AIY ++
Sbjct: 237 E------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQP 290
Query: 152 PD-APAFVKPESSTP 165
PD + + VKPE + P
Sbjct: 291 PDTSSSIVKPEMNPP 305
>gi|356502774|ref|XP_003520191.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 274
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 110/137 (80%), Gaps = 6/137 (4%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALE- 90
LQELVPS NKTDRAAMLDEIVDYVKFLRLQVKV ++ G A AVA LV D+PLSS E
Sbjct: 142 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVNALXXXGGADAVAPLVTDIPLSSVEEE 201
Query: 91 -GESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRT 149
GE G +QP WEK SNDGTE+QVAKLMEE++GAAMQFLQSKALCIMP+SLASAIY++
Sbjct: 202 GGE----GRNQPAWEKCSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQS 257
Query: 150 RQPDAPAFVKPESSTPS 166
+ D + VKPE + PS
Sbjct: 258 QPSDTSSIVKPEINPPS 274
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/135 (70%), Positives = 111/135 (82%), Gaps = 7/135 (5%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ +KTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV ++PLSS++E
Sbjct: 179 LQELVPTVSKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSIED 238
Query: 92 ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQ 151
E +Q WEKWSNDGTE QVAKLMEE++GAAMQ LQSKALCIMPISLA AIY ++
Sbjct: 239 E------TQGVWEKWSNDGTELQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQP 292
Query: 152 PD-APAFVKPESSTP 165
D + + +KPE + P
Sbjct: 293 QDTSSSIIKPEMNPP 307
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 53 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 112
Query: 79 LVADVPLSSALEGE----SIDGGS----SQPEWEKWSNDG----TEQQVAKLMEEDIGAA 126
LVAD +SS G+ S DGGS S +ND TE QVAKLMEED+G+A
Sbjct: 113 LVAD--MSSEAGGDCIQASADGGSLSRTSNGNQTARTNDSSLTVTEHQVAKLMEEDMGSA 170
Query: 127 MQFLQSKALCIMPISLASAI 146
MQ+LQ K LC+MPISLA+AI
Sbjct: 171 MQYLQGKGLCLMPISLATAI 190
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 108/143 (75%), Gaps = 14/143 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 276 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 335
Query: 79 LVADVPLSSALEGESIDG-GSSQPEWEK--------WSNDG---TEQQVAKLMEEDIGAA 126
LVAD +SS G+ I G+S P + SND TE QVAKLMEED+G+A
Sbjct: 336 LVAD--MSSEGGGDCIQASGTSGPTGGRATNGTQTXTSNDSLTVTEHQVAKLMEEDMGSA 393
Query: 127 MQFLQSKALCIMPISLASAIYRT 149
MQ+LQ K LC+MPISLA+AI T
Sbjct: 394 MQYLQGKGLCLMPISLATAISTT 416
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 106/145 (73%), Gaps = 11/145 (7%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL++QVKVLSMSRLG AGAVA
Sbjct: 212 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAP 271
Query: 79 LVADVPLSSALEGESIDGGSS----QPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQ 131
LVAD+ + +G P+ SN+ TE QVAKLMEED+G+AMQ+LQ
Sbjct: 272 LVADMSSEGVSDCVQTNGNGGVHPRNPKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQ 331
Query: 132 SKALCIMPISLASAIY----RTRQP 152
K LC+MPISLA+AI TR P
Sbjct: 332 GKGLCLMPISLATAISTATCHTRNP 356
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 106/145 (73%), Gaps = 11/145 (7%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL++QVKVLSMSRLG AGAVA
Sbjct: 215 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAP 274
Query: 79 LVADVPLSSALEGESIDGGSS----QPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQ 131
LVAD+ + +G P+ SN+ TE QVAKLMEED+G+AMQ+LQ
Sbjct: 275 LVADMSSEGVSDCVQTNGNGGVHPRNPKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQ 334
Query: 132 SKALCIMPISLASAIY----RTRQP 152
K LC+MPISLA+AI TR P
Sbjct: 335 GKGLCLMPISLATAISTATCHTRNP 359
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 104/143 (72%), Gaps = 15/143 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 241 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 300
Query: 79 LVADVPLSSALE-----GESIDGGSSQPEWEKW-------SNDG---TEQQVAKLMEEDI 123
LVAD+ + G S GG+ P SND TE QVAKLMEED+
Sbjct: 301 LVADMYSEGGGDCIQANGNSNGGGAHAPNSNTNQTSATTPSNDSLTMTEHQVAKLMEEDM 360
Query: 124 GAAMQFLQSKALCIMPISLASAI 146
G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 361 GSAMQYLQGKGLCLMPISLATAI 383
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 13/131 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEIVDYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 256 RLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAP 315
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
LVAD+ S G ++ G S+DG TEQQVAKLMEED+G AMQ+LQ K L
Sbjct: 316 LVADMS-SEGRGGVAVAAG---------SDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGL 365
Query: 136 CIMPISLASAI 146
C+MP+SLASAI
Sbjct: 366 CLMPVSLASAI 376
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 13/131 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEIVDYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 255 RLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAP 314
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
LVAD+ S G ++ G S+DG TEQQVAKLMEED+G AMQ+LQ K L
Sbjct: 315 LVADMS-SEGRGGVAVAAG---------SDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGL 364
Query: 136 CIMPISLASAI 146
C+MP+SLASAI
Sbjct: 365 CLMPVSLASAI 375
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/143 (62%), Positives = 106/143 (74%), Gaps = 17/143 (11%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 220 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 279
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKW------------SNDG---TEQQVAKLMEEDI 123
LVADV SS GE + G +Q +ND TEQQVAKLME+D+
Sbjct: 280 LVADV--SSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDM 337
Query: 124 GAAMQFLQSKALCIMPISLASAI 146
G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 338 GSAMQYLQGKGLCLMPISLATAI 360
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 101/133 (75%), Gaps = 15/133 (11%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 213 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 272
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
LVA EG GG SND TEQQVAKLMEED+G+AMQ+LQ K L
Sbjct: 273 LVA--------EG----GGDCIQAKRSNSNDSLAMTEQQVAKLMEEDMGSAMQYLQGKGL 320
Query: 136 CIMPISLASAIYR 148
C+MPISLASAI +
Sbjct: 321 CLMPISLASAISK 333
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +V+
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 213
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+++ S ++ GGS + SND TE QVAKLMEED+G+AMQ+LQ K L
Sbjct: 214 QISEAGGSHGNASSAMVGGS---QTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGL 270
Query: 136 CIMPISLASAIY----RTRQPDAPAFV 158
C+MPISLA+AI +R P P V
Sbjct: 271 CLMPISLATAISTATCHSRNPLIPGAV 297
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +V+
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 213
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+++ S ++ GGS + SND TE QVAKLMEED+G+AMQ+LQ K L
Sbjct: 214 QLSEAGGSHGNASSAMAGGS---QTAGNSNDSITMTEHQVAKLMEEDMGSAMQYLQGKGL 270
Query: 136 CIMPISLASAIY----RTRQPDAPAFV 158
C+MPISLA+AI +R P P V
Sbjct: 271 CLMPISLATAISTATCHSRNPLIPGPV 297
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 106/145 (73%), Gaps = 15/145 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTD+A+MLDEI+DYVKFL++QVKVLSMSRLG AGAVA
Sbjct: 160 RLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAP 219
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWS-----NDG------TEQQVAKLMEEDIGAAM 127
LVA++ G+ G+S W+ + N G TE+QV++LMEED+G+AM
Sbjct: 220 LVANMSPEDNGNGD----GTSSSGWDGNAGNSDDNGGGSTLRATEEQVSRLMEEDMGSAM 275
Query: 128 QFLQSKALCIMPISLASAIYRTRQP 152
Q+LQ K LC+MPISLAS I P
Sbjct: 276 QYLQGKGLCLMPISLASLISSATSP 300
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYV+FL+LQVKVLSMSRLG A +V+
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQLQVKVLSMSRLGGAASVSS 213
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+++ S ++ GGS + SND TE QVAKLMEED+G+AMQ+LQ K L
Sbjct: 214 QISEAGGSHGNASSAMVGGS---QTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGL 270
Query: 136 CIMPISLASAIY----RTRQPDAPAFV 158
C+MPISLA+AI +R P P V
Sbjct: 271 CLMPISLATAISTATCHSRNPLIPGAV 297
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 103/136 (75%), Gaps = 14/136 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 120 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 179
Query: 79 LVADVPLSSALEGESIDG-GSSQPEWEK--------WSNDG---TEQQVAKLMEEDIGAA 126
LVAD +SS G+ I G+S P + SND TE QVAKLMEED+G+A
Sbjct: 180 LVAD--MSSEGGGDCIQASGTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSA 237
Query: 127 MQFLQSKALCIMPISL 142
MQ+LQ K LC+MPISL
Sbjct: 238 MQYLQGKGLCLMPISL 253
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +V+
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 213
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+++ S ++ GGS + SND TE QVAKLMEED+G+AMQ+LQ + L
Sbjct: 214 QISEAGGSHGNASSAMVGGS---QTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGEGL 270
Query: 136 CIMPISLASAIY----RTRQPDAPAFV 158
C+MPISLA+AI +R P P V
Sbjct: 271 CLMPISLATAISTATCHSRNPLIPGAV 297
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 13/141 (9%)
Query: 15 FFVVQ----LRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
FF+ LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL
Sbjct: 241 FFIASMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 300
Query: 71 GAAGAVAQLVADVP---------LSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEE 121
G A AVA LVA++ SS+ GE+ +G S+ + TEQQVAKLMEE
Sbjct: 301 GGASAVAPLVANMSSESNGNGNATSSSGNGEAANGSSNGDNNGGGTLRVTEQQVAKLMEE 360
Query: 122 DIGAAMQFLQSKALCIMPISL 142
D+G+AMQ+LQ K LC+MPISL
Sbjct: 361 DMGSAMQYLQGKGLCLMPISL 381
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 103/143 (72%), Gaps = 17/143 (11%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 272 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 331
Query: 79 LVADVPLSSALEGESID---------------GGSSQPEWEKWSNDGTEQQVAKLMEEDI 123
LVAD+ SS G+ I SSQ S TE QVAKLMEED+
Sbjct: 332 LVADI--SSEGGGDCIQANANGAAGNGSLPRANNSSQTPSSNDSLTVTEHQVAKLMEEDM 389
Query: 124 GAAMQFLQSKALCIMPISLASAI 146
G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 390 GSAMQYLQGKGLCLMPISLATAI 412
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 13/141 (9%)
Query: 15 FFVVQ----LRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
FF+ LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL
Sbjct: 242 FFIASMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 301
Query: 71 GAAGAVAQLVADVP---------LSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEE 121
G A AVA LVA++ SS+ GE+ +G S+ + TEQQVAKLMEE
Sbjct: 302 GGASAVAPLVANMSSESNGNGNATSSSGNGEAANGSSNGDNNGGGTLRVTEQQVAKLMEE 361
Query: 122 DIGAAMQFLQSKALCIMPISL 142
D+G+AMQ+LQ K LC+MPISL
Sbjct: 362 DMGSAMQYLQGKGLCLMPISL 382
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 13/141 (9%)
Query: 15 FFVVQ----LRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
FF+ LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL
Sbjct: 242 FFIASMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 301
Query: 71 GAAGAVAQLVADVP---------LSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEE 121
G A AVA LVA++ SS+ GE+ +G S+ + TEQQVAKLMEE
Sbjct: 302 GGASAVAPLVANMSSESNGNGNATSSSGNGEAANGSSNGDNNGGGTLRVTEQQVAKLMEE 361
Query: 122 DIGAAMQFLQSKALCIMPISL 142
D+G+AMQ+LQ K LC+MPISL
Sbjct: 362 DMGSAMQYLQGKGLCLMPISL 382
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 105/153 (68%), Gaps = 16/153 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 190 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 249
Query: 79 LVADVPLSSALEGESID-----GGSSQPE----WEKWSNDG---TEQQVAKLMEEDIGAA 126
LVAD+ G D G P +ND TE QVAKLMEED+G+A
Sbjct: 250 LVADISSEGGGGGGGGDCVTNGAGGVLPRSTTTAASTTNDSLTMTEHQVAKLMEEDMGSA 309
Query: 127 MQFLQSKALCIMPISLASAIY----RTRQPDAP 155
MQ+LQ K LC+MPISLA+AI TR P P
Sbjct: 310 MQYLQGKGLCLMPISLATAISTATCHTRSPLIP 342
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 105/168 (62%), Gaps = 35/168 (20%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 269 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 328
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG--------------------------TE 112
LVAD+ S +GG + SN G TE
Sbjct: 329 LVADM---------SSEGGGDCIQANGKSNGGGAQASTTNTNTNQTTATTTSNDSLTMTE 379
Query: 113 QQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKP 160
QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI P V P
Sbjct: 380 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCPTRNVNVNP 427
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 99/131 (75%), Gaps = 9/131 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVPS NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AV
Sbjct: 180 RLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVGP 239
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG------TEQQVAKLMEEDIGAAMQFLQS 132
L A + S+ G +G SS + N+G TEQQVA+LMEED+G AMQ+LQ
Sbjct: 240 LAAGLSSESSGNG---NGTSSSGDGNGEDNNGGSTLWATEQQVARLMEEDMGTAMQYLQG 296
Query: 133 KALCIMPISLA 143
K LC+MPISLA
Sbjct: 297 KGLCLMPISLA 307
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 107/145 (73%), Gaps = 7/145 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGA+
Sbjct: 48 RLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGALPS 107
Query: 79 LV-ADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKA 134
LV D+P A + G S P + DG TE+QV ++ME+D+G+AMQ+LQSK
Sbjct: 108 LVNNDLPSEGANTFAASAGSSGIPNPAQ---DGLALTERQVTRMMEDDMGSAMQYLQSKG 164
Query: 135 LCIMPISLASAIYRTRQPDAPAFVK 159
LC+MPISLA+AI T + A A
Sbjct: 165 LCLMPISLATAISTTGKGSAQATAN 189
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGA+
Sbjct: 47 RLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGALVN 106
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
+ + G S P + ++ TE+QV ++ME+D+GAAMQ+LQSK LC+M
Sbjct: 107 SDPPAEGGNNFAASAGSSGVSNPAQDGLASALTERQVTRMMEDDMGAAMQYLQSKGLCLM 166
Query: 139 PISLASAIYRTRQ 151
PISLA+AI T +
Sbjct: 167 PISLATAISTTNK 179
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 99/131 (75%), Gaps = 11/131 (8%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+ YVKFL+LQVKVLSMSRLG A AVA
Sbjct: 46 RLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVLSMSRLGGAAAVAP 105
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
LVAD+ E +G + +ND TE QV KLMEED+G+AMQ+LQ K L
Sbjct: 106 LVADI------SSEVRNGNNG--TVTASTNDTLTVTEHQVVKLMEEDMGSAMQYLQGKGL 157
Query: 136 CIMPISLASAI 146
C+MPISLASAI
Sbjct: 158 CLMPISLASAI 168
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 106/135 (78%), Gaps = 9/135 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA-VA 77
+LRRE+IA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGA +A
Sbjct: 152 RLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGATMA 211
Query: 78 QLVADVPLSSALEGESIDGGSS---QPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQ 131
LVAD+PL A G+ + S Q DG TE QVA+LME+D+G+AMQ+LQ
Sbjct: 212 PLVADLPLEGA--GQELVSSSQLCRQISVNLSPQDGIALTEHQVARLMEDDMGSAMQYLQ 269
Query: 132 SKALCIMPISLASAI 146
SK LC+MPISLA++I
Sbjct: 270 SKGLCLMPISLATSI 284
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 102/128 (79%), Gaps = 7/128 (5%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQ+LVP+ NKTD+A+MLDEIVDYVKFL+LQVKVLSMSRLG+A AV
Sbjct: 20 RLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGSAAAVPS 79
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
LVAD+P EG + S+ S+DG E+QVA+LM+ED+G+AMQ+LQSK L
Sbjct: 80 LVADLP----SEGANSLLASTLSRSTGISHDGLASAERQVARLMDEDMGSAMQYLQSKGL 135
Query: 136 CIMPISLA 143
C+MPISLA
Sbjct: 136 CLMPISLA 143
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 13/142 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVA 77
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL GAA A +
Sbjct: 203 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASS 262
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
Q+ D GGS + TE QVAKLMEED+G+AMQ+LQ K LC+
Sbjct: 263 QISEDA------------GGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCL 310
Query: 138 MPISLASAIYRTRQPDAPAFVK 159
MPISLA+ I P FVK
Sbjct: 311 MPISLATTISTATCPSRSPFVK 332
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 102/145 (70%), Gaps = 19/145 (13%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +V+
Sbjct: 144 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 203
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG----TEQQVAKLMEEDIGAAMQFLQSKA 134
+++ D G S E S+ G TE QVAKLMEED+G+AMQ+LQ K
Sbjct: 204 QISE------------DAGGSH---ENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKG 248
Query: 135 LCIMPISLASAIYRTRQPDAPAFVK 159
LC+MPISLA+ I P FVK
Sbjct: 249 LCLMPISLATTISTATCPSRNPFVK 273
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 13/142 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVA 77
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL GAA A +
Sbjct: 146 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASS 205
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
Q+ D GGS + TE QVAKLMEED+G+AMQ+LQ K LC+
Sbjct: 206 QISEDA------------GGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCL 253
Query: 138 MPISLASAIYRTRQPDAPAFVK 159
MPISLA+ I P FVK
Sbjct: 254 MPISLATTISTATCPSRSPFVK 275
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 101/143 (70%), Gaps = 13/143 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AV
Sbjct: 204 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATAVGT 263
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---------TEQQVAKLMEEDIGAAMQF 129
LVA + A EG G+S +N TEQQVA+LMEED+G AMQ+
Sbjct: 264 LVAGI----ASEGNGSGDGTSDSGKGNAANGENGGGGSLQVTEQQVARLMEEDMGTAMQY 319
Query: 130 LQSKALCIMPISLASAIYRTRQP 152
LQ K LC+MPISLASAI P
Sbjct: 320 LQGKGLCLMPISLASAISSATWP 342
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 98/142 (69%), Gaps = 13/142 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVA 77
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL GAA A +
Sbjct: 146 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASS 205
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
Q+ D GGS + TE Q AKLMEED+G+AMQ+LQ K LC+
Sbjct: 206 QISEDA------------GGSHENTSSSGEAKMTEHQXAKLMEEDMGSAMQYLQGKGLCL 253
Query: 138 MPISLASAIYRTRQPDAPAFVK 159
MPISLA+ I P FVK
Sbjct: 254 MPISLATTISTATCPSRSPFVK 275
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 100/138 (72%), Gaps = 12/138 (8%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLS+SRLG GA A
Sbjct: 233 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLG--GATAA 290
Query: 79 LVADVPLSSALEG------ESIDGGSSQPE-WEKWSNDG---TEQQVAKLMEEDIGAAMQ 128
+ + +P S G +G S Q SND TE QV KLMEED+G+AMQ
Sbjct: 291 MPSRLPDLSTEGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQ 350
Query: 129 FLQSKALCIMPISLASAI 146
+LQ K LC+MPISLA+AI
Sbjct: 351 YLQGKGLCLMPISLATAI 368
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 104/157 (66%), Gaps = 17/157 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV-- 76
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI++YV+FL+LQVKVLSMSRLG AG+V
Sbjct: 115 RLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGP 174
Query: 77 ----------AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAA 126
+L A + L G GSS TEQ+VAKLMEED+G+A
Sbjct: 175 RLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRS-----TEQRVAKLMEEDMGSA 229
Query: 127 MQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPESS 163
MQ+LQ K LC+MPISLA+AI + + P SS
Sbjct: 230 MQYLQGKGLCLMPISLATAISSSTTHSRGSLFNPISS 266
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 103/134 (76%), Gaps = 13/134 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV
Sbjct: 275 RLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGNAGAV-- 332
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+ D+P + + + G + + DG TE+QVAKLMEED+G+AMQ+LQ+K L
Sbjct: 333 -MTDLPPEDSNQFLAALG-------QNGAQDGIALTERQVAKLMEEDMGSAMQYLQNKGL 384
Query: 136 CIMPISLASAIYRT 149
C+MPI LAS + +T
Sbjct: 385 CLMPIHLASNMSKT 398
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 17/140 (12%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV-- 76
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI++YV+FL+LQVKVLSMSRLG AGAV
Sbjct: 115 RLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGAVGP 174
Query: 77 ----------AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAA 126
+L A + L G GSS TEQ+VAKLMEED+G+A
Sbjct: 175 RLNGLSAEAGGRLNALTAPCNGLNGNGNVTGSSNESLRS-----TEQRVAKLMEEDMGSA 229
Query: 127 MQFLQSKALCIMPISLASAI 146
MQ+LQ K LC+MPISLA+AI
Sbjct: 230 MQYLQGKGLCLMPISLATAI 249
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 97/130 (74%), Gaps = 14/130 (10%)
Query: 29 MRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSA 88
M+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA LVAD +SS
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAD--MSSE 58
Query: 89 LEGESI----DGGS----SQPEWEKWSNDG----TEQQVAKLMEEDIGAAMQFLQSKALC 136
G+ I +GGS + +ND TE QVAKLMEED+G+AMQ+LQ K LC
Sbjct: 59 AGGDCIQANANGGSIARTTNGNQTASTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLC 118
Query: 137 IMPISLASAI 146
+MPISLA+AI
Sbjct: 119 LMPISLATAI 128
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 103/134 (76%), Gaps = 13/134 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV
Sbjct: 275 RLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGNAGAV-- 332
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+ D+P + + + G + + DG TE+QVAKLMEED+G+AMQ+LQ+K L
Sbjct: 333 -MTDLPPEDSNQFLAALG-------QNGAQDGIALTERQVAKLMEEDMGSAMQYLQNKGL 384
Query: 136 CIMPISLASAIYRT 149
C+MPI LAS + +T
Sbjct: 385 CLMPIHLASNMSKT 398
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 107/150 (71%), Gaps = 15/150 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNK---TDRAAMLDEIVDYVKFLRLQVK----VLSMSRLG 71
+LRRERIA+RM+ALQELVP+ NK TD+A+MLDEI+DYVKFL+LQVK VLSMSRLG
Sbjct: 254 RLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQVKASMHVLSMSRLG 313
Query: 72 AAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQ 131
A AVA LVAD+ + EG G P E S TEQQVAKLMEED+GAAMQ+LQ
Sbjct: 314 GAAAVAPLVADM----SSEGRGGAGNGGGPAAESDSLTVTEQQVAKLMEEDMGAAMQYLQ 369
Query: 132 SKALCIMPISLASAIY----RTRQPDAPAF 157
K LC+MP+SLASAI + R P AF
Sbjct: 370 GKGLCLMPVSLASAISSATCQLRPPSGHAF 399
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AV
Sbjct: 211 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATAVGP 270
Query: 79 LVADVPLSSALEG----ESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKA 134
LVA + G +S +G ++ E S TEQQVA+LMEED+G AMQ+LQ K
Sbjct: 271 LVASMASEGNGNGNGTSDSGNGNAANGENGGGSLQVTEQQVARLMEEDMGTAMQYLQGKG 330
Query: 135 LCIMP 139
LC+MP
Sbjct: 331 LCLMP 335
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 105/151 (69%), Gaps = 22/151 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNK------TDRAAMLDEIVDYVKFLRLQVKV-------- 64
+LRRERIA+RM+ALQELVP+ NK TD+A+MLDEI+DYVKFL+LQVKV
Sbjct: 301 RLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQVKVFLTVVVVQ 360
Query: 65 -LSMSRLGAAGAVAQLVADVPLSSALEGES--IDGGSSQPEWEKWSNDG---TEQQVAKL 118
LSMSRLG A AVA LVAD +SS G S G ++ SND TE QVAKL
Sbjct: 361 VLSMSRLGGAAAVAPLVAD--MSSEASGTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKL 418
Query: 119 MEEDIGAAMQFLQSKALCIMPISLASAIYRT 149
MEED+G+AMQ+LQ K LC+MPISLA+AI T
Sbjct: 419 MEEDMGSAMQYLQGKGLCLMPISLATAISTT 449
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 99/142 (69%), Gaps = 14/142 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK----------VLSMS 68
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVK VLSMS
Sbjct: 175 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKASTYTKLLIHVLSMS 234
Query: 69 RLGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDG----TEQQVAKLMEEDIG 124
RLG A AVA LVAD+ G + G + + TEQQVAKLMEED+G
Sbjct: 235 RLGGAAAVAPLVADMSSEGRGGGAANGGAPAAAAAAAAAGSDSLTVTEQQVAKLMEEDMG 294
Query: 125 AAMQFLQSKALCIMPISLASAI 146
AMQ+LQ K LC+MPISLASAI
Sbjct: 295 TAMQYLQGKGLCLMPISLASAI 316
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 100/141 (70%), Gaps = 15/141 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNK---TDRAAMLDEIVDYVKFLRLQVK----------VL 65
+LRRERIA+RM+ALQELVP+ NK TD+A+MLDEI+DYVKFL+LQVK VL
Sbjct: 266 RLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVKASTYTKLLIHVL 325
Query: 66 SMSRLGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGA 125
SMSRLG A AVA LVAD +SS G G + S TEQQVAKLMEED+G
Sbjct: 326 SMSRLGGAAAVAPLVAD--MSSEGRGGGAANGGAPAAAGSDSLTVTEQQVAKLMEEDMGT 383
Query: 126 AMQFLQSKALCIMPISLASAI 146
AMQ+LQ K LC+MPISLASAI
Sbjct: 384 AMQYLQGKGLCLMPISLASAI 404
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 7/128 (5%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQ VLSMSRLG A AVA
Sbjct: 255 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ--VLSMSRLGGAAAVAP 312
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
LVAD +SS G + ++ TEQQVAKLMEED+G AMQ+LQ K LC+M
Sbjct: 313 LVAD--MSSEGRGGAG---AAAAAGSDGGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLM 367
Query: 139 PISLASAI 146
P+SLASAI
Sbjct: 368 PVSLASAI 375
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 98/150 (65%), Gaps = 31/150 (20%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +A
Sbjct: 199 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMAP 258
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG----------------------TEQQVA 116
LVA + S + SS + + TEQQVA
Sbjct: 259 LVASM---------SSEANSSNTKSGSGAAAAAATANGNGNGGEKSGGGAGLRVTEQQVA 309
Query: 117 KLMEEDIGAAMQFLQSKALCIMPISLASAI 146
K+MEED+G AMQ+LQ K LC+MPISLASAI
Sbjct: 310 KMMEEDMGTAMQYLQGKGLCLMPISLASAI 339
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 104/148 (70%), Gaps = 7/148 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ+LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 331 RLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 390
Query: 79 LV----ADVPLSSALEGESIDGGSSQ-PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
L+ + + +L +I G + P+ E S EQ+V KLME I +AMQ+LQ+K
Sbjct: 391 LLRESQTECHSNPSLSASTISQGPTDMPDSEDSS--AFEQEVVKLMETSITSAMQYLQNK 448
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MPI+LASAI + A A + PE
Sbjct: 449 GLCLMPIALASAISNQKGMAAAAAIPPE 476
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 112/162 (69%), Gaps = 24/162 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQELVP+ NKT++A+MLDEI+DYVKFL+LQVKVLSMSRLGAA AV
Sbjct: 330 RLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSRLGAAEAVVP 389
Query: 79 LVADV----------PLSSALEGE----SIDGG--SSQPEWEKWSNDGT---EQQVAKLM 119
L+ + P SS+ E + ++ GG QPE DG EQ+V KLM
Sbjct: 390 LLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPELL----DGGAMFEQEVVKLM 445
Query: 120 EEDIGAAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
E+++ AMQ+LQSK LC+MP++LASAI ++ + A V+PE
Sbjct: 446 EDNMTTAMQYLQSKGLCLMPVALASAI-SAQKGTSSAAVRPE 486
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 112/162 (69%), Gaps = 24/162 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQELVP+ NKT++A+MLDEI+DYVKFL+LQVKVLSMSRLGAA AV
Sbjct: 330 RLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSRLGAAEAVVP 389
Query: 79 LVADV----------PLSSALEGE----SIDGG--SSQPEWEKWSNDGT---EQQVAKLM 119
L+ + P SS+ E + ++ GG QPE DG EQ+V KLM
Sbjct: 390 LLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPELL----DGGAMFEQEVVKLM 445
Query: 120 EEDIGAAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
E+++ AMQ+LQSK LC+MP++LASAI ++ + A V+PE
Sbjct: 446 EDNMTTAMQYLQSKGLCLMPVALASAI-SAQKGTSSAAVRPE 486
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 76/130 (58%), Positives = 98/130 (75%), Gaps = 3/130 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+IA+RM+ LQELVP+ NKTD+A+MLDEI++YVKFL+LQVKVLSMSRLGAA AV
Sbjct: 312 RLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAEAVVP 371
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSND--GTEQQVAKLMEEDIGAAMQFLQSKALC 136
L+ D + +G S+ + Q E S D EQ+V KLME ++ AMQ+LQSK LC
Sbjct: 372 LITDGQAEGS-KGLSLSPSAGQAEDICQSPDQIAFEQEVVKLMESNVTMAMQYLQSKGLC 430
Query: 137 IMPISLASAI 146
+MPI+LA+AI
Sbjct: 431 LMPIALATAI 440
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 98/130 (75%), Gaps = 3/130 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+IA+RM+ LQELVP+ NKTD+A+MLDEI++YVKFL+LQVKVLSMSRLGAA AV
Sbjct: 165 RLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAEAVVP 224
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSND--GTEQQVAKLMEEDIGAAMQFLQSKALC 136
L+ D + +G S+ + Q E S D EQ+V KLME ++ AMQ+LQSK LC
Sbjct: 225 LITDGQAEGS-KGLSLSPSAGQAEDICQSPDQIAFEQEVVKLMESNVTMAMQYLQSKGLC 283
Query: 137 IMPISLASAI 146
+MPI+LA+AI
Sbjct: 284 LMPIALATAI 293
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 103/148 (69%), Gaps = 7/148 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 332 RLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 391
Query: 79 LV----ADVPLSSALEGESID-GGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
L+ + + +L +I G + P+ E S EQ+V KLME I +AMQ+LQ+K
Sbjct: 392 LLRESQTECHSNPSLSASTISQGPTDMPDSEDSS--AFEQEVVKLMETSIISAMQYLQNK 449
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MPI+LASAI + A A + PE
Sbjct: 450 GLCLMPIALASAISNQKGMAAAAAIPPE 477
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVA 77
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYV+FL+LQVKVLSMSRL GAAG +A
Sbjct: 210 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVKVLSMSRLGGAAGGMA 269
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKA 134
LVA + S S GG++ + + G E QVAK+MEED+G AMQ+LQ K
Sbjct: 270 PLVASMASSEGKSNGSGGGGNTNATTKSGNGGGLRVAEHQVAKMMEEDMGTAMQYLQGKG 329
Query: 135 LCIMP 139
LC+MP
Sbjct: 330 LCLMP 334
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 102/148 (68%), Gaps = 7/148 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 332 RLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 391
Query: 79 LV----ADVPLSSALEGESID-GGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
L+ + + +L +I G P+ E S EQ+V KLME I +AMQ+LQ+K
Sbjct: 392 LLRESQTECHSNPSLSASTISQGPPDMPDSEDSS--AFEQEVVKLMETSIISAMQYLQNK 449
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MPI+LASAI + A A + PE
Sbjct: 450 GLCLMPIALASAISNQKGMAAAAAIPPE 477
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 102/148 (68%), Gaps = 7/148 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 332 RLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 391
Query: 79 LV----ADVPLSSALEGESID-GGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
L+ + + +L +I G P+ E S EQ+V KLME I +AMQ+LQ+K
Sbjct: 392 LLRESQTECHSNPSLSASTISQGPPDMPDSEDSS--AFEQEVVKLMETSIISAMQYLQNK 449
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MPI+LASAI + A A + PE
Sbjct: 450 GLCLMPIALASAISNQKGMAAAAAIPPE 477
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 102/148 (68%), Gaps = 7/148 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 255 RLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 314
Query: 79 LV----ADVPLSSALEGESID-GGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
L+ + + +L +I G P+ E S EQ+V KLME I +AMQ+LQ+K
Sbjct: 315 LLRESQTECHSNPSLSASTISQGPPDMPDSEDSS--AFEQEVVKLMETSIISAMQYLQNK 372
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MPI+LASAI + A A + PE
Sbjct: 373 GLCLMPIALASAISNQKGMAAAAAIPPE 400
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQELVP+ N+TD+A+MLDEI++YVKFL+LQVKVLSMSRLGA AV
Sbjct: 314 RLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKVLSMSRLGATEAVVP 373
Query: 79 LVAD------------VPLSSALEGESIDGGS-SQPEWEKWSNDGTEQQVAKLMEEDIGA 125
L+ P S + + GGS P E EQ+VA+LME D+
Sbjct: 374 LLTQSQTENSGGGLLLSPRSGSGRQQQARGGSLPPPSSEVRDGAAFEQEVAQLMESDMTT 433
Query: 126 AMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPESS 163
AMQ+LQSK LC+MP++LASAI + + A V+PE+
Sbjct: 434 AMQYLQSKGLCLMPVALASAISGQKGASS-AAVQPENG 470
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 104/152 (68%), Gaps = 16/152 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQELVP+ NK D+++MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 337 RLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 396
Query: 79 LVADVPL----SSALEGESIDGG---SSQPEWEKWSNDGT--EQQVAKLMEEDIGAAMQF 129
L+ + +S+L G + G + PE D EQ+V KLME I +AMQ+
Sbjct: 397 LLRESQTEGHSNSSLSGTTTSQGLLDVANPE------DSVVFEQEVIKLMETSITSAMQY 450
Query: 130 LQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
LQ+K LC+MPI+LASAI + A A + PE
Sbjct: 451 LQNKGLCLMPIALASAISNQKGVSAAA-IPPE 481
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%), Gaps = 22/155 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM++LQ+LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 336 RLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAV-- 393
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGT------------EQQVAKLMEEDIGAA 126
+PL + + E G QP + G E++V KLME I +A
Sbjct: 394 ----LPLLTESQTEGYHG---QPLSAPTNTQGLLDALDSEDAFVFEEEVVKLMETSITSA 446
Query: 127 MQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
MQ+LQ+K LC+MP++LASAI T++ + A + PE
Sbjct: 447 MQYLQNKGLCLMPVALASAI-STQKGVSAAAIPPE 480
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 101/155 (65%), Gaps = 22/155 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ+LVP+ NK D+++MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 336 RLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 395
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGT------------EQQVAKLMEEDIGAA 126
L+A+ +G S+ P ++ G EQ+V KLME I A
Sbjct: 396 LLAE---------SQTEGRSNSPLSSPTTSQGLLDVAGPDDSLVFEQEVIKLMETSITNA 446
Query: 127 MQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
MQ+LQ+K LC+MPI+LASAI + A A + PE
Sbjct: 447 MQYLQNKGLCLMPIALASAISNQKGTSAAA-IPPE 480
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 17/150 (11%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQ+LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSR+GA GAV
Sbjct: 298 RLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRVGAPGAVLP 357
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKW-----SNDG--TEQQVAKLMEEDIGAAMQFLQ 131
L+ + +G QP + S D E++V KLME I +AMQ+LQ
Sbjct: 358 LLTE---------SKTEGYHGQPLPQGLLDALDSEDSFVFEEEVVKLMETSITSAMQYLQ 408
Query: 132 SKALCIMPISLASAIYRTRQPDAPAFVKPE 161
SK LC+MP++LASAI T++ + A V PE
Sbjct: 409 SKGLCLMPVALASAI-STQKGVSAAAVPPE 437
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 98/137 (71%), Gaps = 17/137 (12%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+IA+RM+ LQELVP+ NK D+A+MLDEI++YVKFL+LQVKVLSMSRLGAAGAV
Sbjct: 256 RLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAGAVIP 315
Query: 79 LVAD--------VPLS-SALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF 129
L+ D + LS SA G I + Q + EQ+V KL+E D+ AMQ+
Sbjct: 316 LLTDGQPEGHNSLSLSPSAGLGIDISPSADQIAF--------EQEVLKLLESDVTMAMQY 367
Query: 130 LQSKALCIMPISLASAI 146
LQSK LC+MPI+LA+AI
Sbjct: 368 LQSKGLCLMPIALAAAI 384
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 17/150 (11%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQ+LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSR+GA GAV
Sbjct: 333 RLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRVGAPGAVLP 392
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKW-----SNDG--TEQQVAKLMEEDIGAAMQFLQ 131
L+ + +G QP + S D E++V KLME I +AMQ+LQ
Sbjct: 393 LLTE---------SKTEGYHGQPLPQGLLDALDSEDSFVFEEEVVKLMETSITSAMQYLQ 443
Query: 132 SKALCIMPISLASAIYRTRQPDAPAFVKPE 161
SK LC+MP++LASAI T++ + A V PE
Sbjct: 444 SKGLCLMPVALASAI-STQKGVSAAAVPPE 472
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQ+LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 336 RLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 395
Query: 79 LVADVPLSSALEGESIDGGSS-QPEWEKWSNDGT---EQQVAKLMEEDIGAAMQFLQSKA 134
L+A+ + G+ + ++ Q + ++ T E++V KLME I +AMQ+LQ+K
Sbjct: 396 LLAES-QTEGYRGQLLSAPTNAQGLLDTEESEDTFAFEEEVVKLMETSITSAMQYLQNKG 454
Query: 135 LCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MP++LASAI T++ + A + PE
Sbjct: 455 LCLMPVALASAI-STQKGVSAASIPPE 480
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQ+LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGA GAV
Sbjct: 336 RLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 395
Query: 79 LVADVPLSSALEGESIDGGSS-QPEWEKWSNDGT---EQQVAKLMEEDIGAAMQFLQSKA 134
L+A+ + G+ + ++ Q + ++ T E++V KLME I +AMQ+LQ+K
Sbjct: 396 LLAES-QTEGYRGQLLSAPTNAQGLLDTEESEDTFAFEEEVVKLMETSITSAMQYLQNKG 454
Query: 135 LCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MP++LASAI T++ + A + PE
Sbjct: 455 LCLMPVALASAI-STQKGVSAASIPPE 480
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 101/151 (66%), Gaps = 14/151 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I++RM+ LQ+LVP+ NK D+++MLDEI+DYVKFL+LQVKVL MSRLGA GAV
Sbjct: 335 RLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVLCMSRLGAPGAVLP 394
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGT--------EQQVAKLMEEDIGAAMQFL 130
L+A+ S EG S + S P + D EQ+V KLME I AMQ+L
Sbjct: 395 LLAE----SQTEGRS-NSPLSSPTASQGLLDAAGPEDSLVFEQEVIKLMETSITNAMQYL 449
Query: 131 QSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
Q+K LC+MPI+LASAI + A A + PE
Sbjct: 450 QNKGLCLMPIALASAISNQKGTSA-AAIPPE 479
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQ+LVP+ NK D+A+MLDEI+D+VKFL+LQVKVLSMSRLGA GAV
Sbjct: 336 RLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQLQVKVLSMSRLGAPGAVLP 395
Query: 79 LVADVPLSSALEGESIDGGSS-QPEWEKWSNDGT---EQQVAKLMEEDIGAAMQFLQSKA 134
L+A+ + G+ + ++ Q + ++ T E++V KLME I +AMQ+LQ+K
Sbjct: 396 LLAES-QTEGYRGQLLSAPTNAQGLLDTEESEDTFAFEEEVVKLMETSITSAMQYLQNKG 454
Query: 135 LCIMPISLASAIYRTRQPDAPAFVKPE 161
LC+MP++LASAI T++ + A + PE
Sbjct: 455 LCLMPVALASAI-STQKGVSAASIPPE 480
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 90/128 (70%), Gaps = 18/128 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELV + NKTD+A+MLDEI+DYVKFL+LQ VLSMSRLG A Q
Sbjct: 133 RLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQ--VLSMSRLGGAARSRQ 190
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
++ +G ++ TEQQVAKLMEED+G AMQ+LQ K LC+M
Sbjct: 191 GRDGAAAAAGSDGLAV----------------TEQQVAKLMEEDMGTAMQYLQGKGLCLM 234
Query: 139 PISLASAI 146
P+SLA+AI
Sbjct: 235 PVSLAAAI 242
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 90/128 (70%), Gaps = 18/128 (14%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELV + NKTD+A+MLDEI+DYVKFL+LQ VLSMSRLG A Q
Sbjct: 161 RLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQ--VLSMSRLGGAARSRQ 218
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
++ +G ++ TEQQVAKLMEED+G AMQ+LQ K LC+M
Sbjct: 219 GRDGAAAAAGSDGLAV----------------TEQQVAKLMEEDMGTAMQYLQGKGLCLM 262
Query: 139 PISLASAI 146
P+SLA+AI
Sbjct: 263 PVSLAAAI 270
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 14/158 (8%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+I+DRM+ LQELVP+ NKTD+A+ML+EI++Y+KFL+LQ KVLSMSRLGA A+
Sbjct: 298 RLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVLSMSRLGATDALVP 357
Query: 79 LVAD-----------VPLSSALEGESIDGGSSQPEWEKWSNDGT--EQQVAKLMEEDIGA 125
L+ D P S A G G Q + + + D EQ+VA++ME+++
Sbjct: 358 LLMDSHNESSGLVMGSPKSGAAAGGKGHAGHRQTDSDDFVEDKVVLEQEVAQMMEDNMTM 417
Query: 126 AMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPESS 163
AMQ+LQ++ LC+MPI+LASAI ++ A V+PE+
Sbjct: 418 AMQYLQNRGLCLMPITLASAI-SVQKGTFSATVRPENG 454
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 94/136 (69%), Gaps = 15/136 (11%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRE+IA+RM+ LQELVP+ +K D+A+MLDEI++YVKFL+LQVKVLSMSRLGA GAV
Sbjct: 367 RLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKVLSMSRLGATGAVIP 426
Query: 79 LVAD--------VPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
L+ D + LS++ G ID S + E +V KL+E ++ A+Q+L
Sbjct: 427 LITDGQAEGSNSLSLSTS-AGLGIDVAPSSDQI------AFEHEVLKLLESNVTKAIQYL 479
Query: 131 QSKALCIMPISLASAI 146
Q K C+MPI+LA+AI
Sbjct: 480 QGKGFCLMPIALAAAI 495
>gi|195620662|gb|ACG32161.1| hypothetical protein [Zea mays]
gi|413939309|gb|AFW73860.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 170
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 80/123 (65%), Gaps = 13/123 (10%)
Query: 39 CNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEGESIDGGS 98
C +TD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AV LVA + A EG G+
Sbjct: 4 CLQTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATAVGTLVAGI----ASEGNGSGDGT 59
Query: 99 SQP---------EWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRT 149
S S TEQQVA+LMEED+G AMQ+LQ K LC+MPISLASAI
Sbjct: 60 SDSGKGNAANGENGGGGSLQVTEQQVARLMEEDMGTAMQYLQGKGLCLMPISLASAISSA 119
Query: 150 RQP 152
P
Sbjct: 120 TWP 122
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/65 (80%), Positives = 61/65 (93%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A AVA
Sbjct: 263 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 322
Query: 79 LVADV 83
LVAD+
Sbjct: 323 LVADM 327
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 5/76 (6%)
Query: 6 CCHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
HQ F QLRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVL
Sbjct: 132 AVHQPPFG-----QLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 186
Query: 66 SMSRLGAAGAVAQLVA 81
SMSRLG A AV LVA
Sbjct: 187 SMSRLGGAAAVGPLVA 202
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +A
Sbjct: 229 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMAP 288
Query: 79 LVADV 83
LVA +
Sbjct: 289 LVASM 293
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +A
Sbjct: 220 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMAP 279
Query: 79 LVADV 83
LVA +
Sbjct: 280 LVASM 284
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +A
Sbjct: 220 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMAP 279
Query: 79 LVADV 83
LVA +
Sbjct: 280 LVASM 284
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +A
Sbjct: 152 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMAP 211
Query: 79 LVADV 83
LVA +
Sbjct: 212 LVASM 216
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 59/65 (90%), Gaps = 2/65 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQ VLSMSRLG A AVA
Sbjct: 266 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ--VLSMSRLGGAAAVAP 323
Query: 79 LVADV 83
LVAD+
Sbjct: 324 LVADM 328
>gi|356502821|ref|XP_003520214.1| PREDICTED: uncharacterized protein LOC100788949 [Glycine max]
Length = 320
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 12/122 (9%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RR+RIAD ++AL EL+P+ + +A +LD+I+DYVK+L+LQ+K S SRL A + A
Sbjct: 194 RRQRIADNLKALHELLPNPAEGSQAYVLDDIIDYVKYLQLQIKEQSGSRLLQADSTA--- 250
Query: 81 ADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPI 140
+PL G +K N+ E+ + KL+E+D AA+Q L+SK L ++P+
Sbjct: 251 --IPL-------VFHEGYGHYINQKMLNEPLEEIMGKLVEDDSAAAVQLLESKGLFLLPM 301
Query: 141 SL 142
+L
Sbjct: 302 AL 303
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 45/48 (93%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
+LRRE+I+DRM+ LQELVP+ N+TD+A+MLDEI++YVKFL+LQVKV S
Sbjct: 314 RLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKVRS 361
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 383 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 429
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
>gi|357440797|ref|XP_003590676.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355479724|gb|AES60927.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 325
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RR+RIAD ++AL EL+P+ + +A +LD+I+DYVK+L++QVK LS S+L A LV
Sbjct: 202 RRQRIADNLKALHELLPTPHVGSQAYILDDIIDYVKYLQIQVKELSGSKLQADSNSIPLV 261
Query: 81 ADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPI 140
++ E+ N+ E+ + L+E + A Q L++K L ++PI
Sbjct: 262 FHEGYGHYIK-------------EQVLNEPLEEIMGNLLEVNSAATCQLLENKGLVLLPI 308
Query: 141 SLASAIYRTRQ 151
+L + + Q
Sbjct: 309 ALVDELNQAMQ 319
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 447 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 493
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 477 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 523
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 45/51 (88%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
+Q RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 9 LQRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMG 59
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 338 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 384
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 469 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 515
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 459 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 505
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQV+++ M G A A +
Sbjct: 345 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMF 404
Query: 81 ADV 83
V
Sbjct: 405 PGV 407
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQV+++ M G A A +
Sbjct: 345 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMF 404
Query: 81 ADV 83
V
Sbjct: 405 PGV 407
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 474 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 520
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 474 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 520
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 355 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 401
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 467 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 513
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 44/48 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM+
Sbjct: 355 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 402
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 480 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 526
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 44/48 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM+
Sbjct: 353 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 400
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 324 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 370
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 396 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMG 443
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 396 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 442
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 417 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 463
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++V+SM
Sbjct: 305 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVMSM 351
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 193 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 239
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 464 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMG 511
>gi|388500044|gb|AFK38088.1| unknown [Medicago truncatula]
Length = 325
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
R +RIAD ++AL EL+P+ + +A +LD+I+DYVK+L++QVK LS S+L A LV
Sbjct: 202 RTQRIADNLKALHELLPTPHVGSQAYILDDIIDYVKYLQIQVKELSGSKLQADSNFIPLV 261
Query: 81 ADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPI 140
++ E+ N+ E+ + L+E + A Q L++K L ++PI
Sbjct: 262 FHEGYGHYIK-------------EQVLNEPLEEIMGNLLEVNSAATCQLLENKGLVLLPI 308
Query: 141 SLASAIYRTRQ 151
+L + + Q
Sbjct: 309 ALVDELNQAMQ 319
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 452 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMG 499
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P CNK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 379 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 425
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 225 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV++ MS +G A A A L
Sbjct: 281 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM--MSSMGPAAAAAGL 337
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 225 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 296 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 296 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P CNK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 372 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 418
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 328 RRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSM 374
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV++ MS +G AG
Sbjct: 336 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM--MSTMGTAG 387
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV++ MS +G AG
Sbjct: 336 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM--MSTMGTAG 387
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV++ MS +G AG
Sbjct: 340 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM--MSTMGTAG 391
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV++++M
Sbjct: 364 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAM 410
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQELVP CNKTD+A++LDE ++Y+K L++QV+++ MS
Sbjct: 260 RRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMS 307
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQV+++ M
Sbjct: 340 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMG 387
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 275 RRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 321
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV++++M
Sbjct: 174 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAM 220
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
F + RR+RI +++RALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M G G
Sbjct: 27 FSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVM---GKGGG 83
Query: 76 VAQLV 80
+A +V
Sbjct: 84 MAPVV 88
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
F + RR+RI +++RALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M G G
Sbjct: 26 FSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVM---GKGGG 82
Query: 76 VAQLV 80
+A +V
Sbjct: 83 MAPVV 87
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L++QV+++ M
Sbjct: 327 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMG 374
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++V+ M
Sbjct: 46 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWM 92
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 320 RRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 366
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L++QV+++ M
Sbjct: 48 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMG 95
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 282 RRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 328
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 288 RRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 334
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 242 RRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMT 289
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 41/45 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RR+RI ++MRALQELVP CNKTD+A+MLDE ++Y+K L+LQ++V+
Sbjct: 249 RRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQVM 293
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 44/49 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
RR++I +++RAL+EL+P+CNK D+A+MLD+ +DY+K L+LQ++++SM R
Sbjct: 220 RRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGR 268
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 44/49 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
RR++I +++RAL+EL+P+CNK D+A+MLD+ +DY+K L+LQ++++SM R
Sbjct: 220 RRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGR 268
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 317 RRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSM 363
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 313 RRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSM 359
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 232 RRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 279
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 243 RRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 290
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 336 RRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMT 383
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNK+D+A+MLDE + Y+K L+LQV+++SM
Sbjct: 320 RRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSM 366
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 332 RRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 379
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV+++SM
Sbjct: 347 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSM 393
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV+++SM
Sbjct: 347 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSM 393
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 348 RRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 395
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+ NKTD+A+MLDE +DY+K L+LQ++++S+
Sbjct: 746 RRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMMSI 792
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV+++SM
Sbjct: 273 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSM 319
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++++ M
Sbjct: 330 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMG 377
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++++ M
Sbjct: 330 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMG 377
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 250 RVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 299
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV+++SM
Sbjct: 226 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSM 272
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++++ M
Sbjct: 311 RRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMG 358
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL+P+CNK D+++ML+E ++Y+K L+LQV+++SM
Sbjct: 334 RRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMG 381
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L++QV+++ M
Sbjct: 278 RRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWM 324
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+ML+E ++Y+K L+LQV+++SM
Sbjct: 131 RRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSM 177
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQEL+P NK+D+A+MLDE +DY+K L+LQV+++SM
Sbjct: 270 RRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMMSM 316
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 285 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 334
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 180 RVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSM 229
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 180 RVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSM 229
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 279 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 328
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+ NKTD+A+MLDE ++Y+K L+LQ++++S+
Sbjct: 607 RRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMMSI 653
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 281 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 330
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella
moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella
moellendorffii]
Length = 85
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 42/46 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR+RI ++M+ALQEL+P+ NKTD+A+MLDE ++Y+K L+LQ++VLS
Sbjct: 32 RRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLS 77
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RR++I++R+R L++L+P NK D A MLDE ++YVKFL+LQV++L L A A
Sbjct: 398 RRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILESDTLDNAPLTASNG 457
Query: 81 ADVPLSSA-------LEGESIDGGSSQP 101
++PL + +G++ GG S P
Sbjct: 458 QNLPLQGSRAKQGLKRKGDTSLGGDSSP 485
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
RR+RI ++M+ALQEL+P CNK D+A+MLDE ++Y+K L+LQ++V+ M AA V Q
Sbjct: 263 RRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQLQVVWMGGGIAAAGVHQ 320
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella
moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella
moellendorffii]
Length = 85
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 42/46 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR+RI ++M+ALQEL+P+ NKTD+A+MLDE ++Y+K L+LQ++VLS
Sbjct: 32 RRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLS 77
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +MR+LQEL+P+C K D+ ++LDE +DY+K L+LQV+V+SM
Sbjct: 26 RRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSM 72
>gi|326499069|dbj|BAK06025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + YV+FL Q++ LS +G G
Sbjct: 246 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYVRFLLGQIEALSYPYMGHGGHG 305
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEW-----EKWSNDGTEQQVAKLMEEDIG-----AA 126
A + +A GES G PE+ N G QQ A E G A+
Sbjct: 306 AS------IQNAPTGESNPG--LFPEYPGQLLNHNKNTGGVQQQAPGQPEQQGTVNEEAS 357
Query: 127 MQFLQSKALCIMPISLASAIYRTRQPD--APA 156
+ L+S+ LC++P+S S D APA
Sbjct: 358 KKGLRSRGLCLVPVSCTSHFSGDNAADYWAPA 389
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 258 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 307
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++++ M
Sbjct: 281 RRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMG 328
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 256 RVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 305
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++++ M
Sbjct: 281 RRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMG 328
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI +++RALQELVP CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 240 RRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 287
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++M+ALQELVP CNK+D+A++LDE ++Y+K L+LQV+++ M+
Sbjct: 155 RRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIMWMT 202
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 248 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 297
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++++ M
Sbjct: 290 RRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMG 337
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
RRERI+DR++ LQELVP+ K D ML++ ++YVKFL+LQVKVL+ +GA Q
Sbjct: 376 RRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKVLTSDDYWPSGATWQ 433
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 180 RVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSM 229
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 45/54 (83%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
F + RR++I ++++ALQEL+P+CNKTD+ +MLDE +DY+K L+LQ+++L M +
Sbjct: 25 FSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQMLVMGK 78
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 118 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 164
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform
1 [Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform
2 [Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform
3 [Zea mays]
Length = 185
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 45/54 (83%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
F + RR++I ++++ALQEL+P+CNKTD+ +MLDE +DY+K L+LQ+++L M +
Sbjct: 25 FSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQMLVMGK 78
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +MR+LQEL+P+C K D+ ++LDE +DY+K L+LQV+V+SM
Sbjct: 395 RRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSM 441
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI +++RALQELVP CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 237 RRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 284
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI +++RALQELVP CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 241 RRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 288
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 38 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 84
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P C KTD+A+MLDE ++Y+K L+LQ++V+ M
Sbjct: 198 RRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWM 244
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 179 RVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 228
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 170 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 216
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 135 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 181
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LS+
Sbjct: 123 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL 169
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 156 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 199 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 245
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 156 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 220 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 269
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 152 RRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 198
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 222 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 271
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 174 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 220
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MR+LQEL+P CNK D+A++LDE ++Y+K L++QV+V+ M+
Sbjct: 209 RRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMT 256
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI +++RALQELVP CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 340 RRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 387
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MR+LQEL+P CNK D+A++LDE ++Y+K L++QV+V+ M+
Sbjct: 218 RRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMT 265
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 186 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 232
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 40/47 (85%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 71
I +RMRALQEL+P+CNK D+A+MLDE ++Y+K L+LQ++++SM G
Sbjct: 445 INERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQIMSMGGGG 491
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 43/48 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI +++RALQELVP CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 416 RRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMT 463
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 170 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 219
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 186 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 232
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 137 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 183
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 95 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 144
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 196 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 242
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 151 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 197
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 177 RVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSM 226
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 162 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM 211
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I +MR L+EL+P+CNK D+A+MLD+ +DY+K L+LQ++++SM
Sbjct: 338 RREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQIMSM 384
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
F + RR+RI ++++ALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M + G A
Sbjct: 20 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK-GMAPV 78
Query: 76 V 76
V
Sbjct: 79 V 79
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 40/44 (90%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+V
Sbjct: 16 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium
distachyon]
Length = 198
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 44/54 (81%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
F + RR+RI ++++ALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M +
Sbjct: 27 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK 80
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
+VQ RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 263 MMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAP 322
Query: 76 VAQLVADVPL 85
+A D+ L
Sbjct: 323 IAYNGMDIGL 332
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 162 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM 211
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
F + RR+RI ++++ALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M + G A
Sbjct: 26 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK-GMAPV 84
Query: 76 V 76
V
Sbjct: 85 V 85
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
Query: 21 RRERIADRMRALQEL--VPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MRALQEL +P CNKTD+A+MLDE ++Y+K L+LQ++V+ M
Sbjct: 178 RRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQLRVMWMG 227
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 208 RRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 254
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER++DR+R LQ+LVP NK D A+MLDE Y+KFL+ QV+ L
Sbjct: 290 AARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 338
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 95 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 141
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER++DR+R LQ+LVP NK D A+MLDE Y+KFL+ QV+ L
Sbjct: 289 AARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 337
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM ++ AA V
Sbjct: 166 RVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSM-KIAAANPVV 224
Query: 78 QL 79
Sbjct: 225 NF 226
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 117 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 163
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 115 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 161
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
F + RR+RI ++++ALQEL+P+C KTD+ +MLDE +DY+K L++Q+++L M + G A
Sbjct: 24 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMGK-GTAPV 82
Query: 76 V 76
V
Sbjct: 83 V 83
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 42/49 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
RR+RI ++++ALQEL+P+C KTD+ +MLDE +DY+K L+LQ+++L M +
Sbjct: 151 RRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK 199
>gi|255559498|ref|XP_002520769.1| DNA binding protein, putative [Ricinus communis]
gi|223540154|gb|EEF41731.1| DNA binding protein, putative [Ricinus communis]
Length = 340
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 12/115 (10%)
Query: 29 MRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSA 88
++ALQEL+P + + ++DEI+DYVK+L+LQ+K LS SRL G + A
Sbjct: 231 LKALQELLPHSVEGSQIVVMDEIIDYVKYLQLQMKELSRSRL--EGHLCSGPAHF----- 283
Query: 89 LEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLA 143
++G ++ N+ E+ +AKL++ + AA +FL+SK L +MP++LA
Sbjct: 284 -----LEGYHPYILHQQTMNEPLEETMAKLLKVNSSAATKFLESKGLFVMPMALA 333
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 42/48 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RR+RI ++MR+LQEL+P CNK D+A++LDE ++Y+K L++Q++++ M+
Sbjct: 247 RRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIMWMT 294
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM 208
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR +I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 115 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 161
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER++DR+R LQ+LVP +K D A+MLDE Y+KFLR QV+ L
Sbjct: 292 AARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQAL 340
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 188 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 234
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM 208
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 209 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM 208
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 39/43 (90%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RR+RI ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++
Sbjct: 326 RRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 368
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCN-KTDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP C+ KT +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 247 RVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSM 296
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 169 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM 218
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQEL P CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 222 RVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 271
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 208 RRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 254
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 208 RRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 254
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 18 VQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ +RRERI++RM+ LQ LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 202 IHVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSM 252
>gi|296086723|emb|CBI32358.3| unnamed protein product [Vitis vinifera]
Length = 403
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVP 84
I++R++ALQ L+P + +A++LD+I+DY+K L+LQ+K LS SRLG +
Sbjct: 285 ISERLKALQVLLPHS-EGGKASVLDDIIDYIKHLQLQIKDLSQSRLGGQSTSDPFIF--- 340
Query: 85 LSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLAS 144
++G ++ + E+ + KL+E + A Q L+ + L +MP++L
Sbjct: 341 ---------LEGYGHYILHDQMLKEPLEEMMGKLLEVNPSEATQLLEGRGLYVMPMTLVE 391
Query: 145 AIYRT 149
+ +T
Sbjct: 392 GLLQT 396
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ LVPSCNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEFLSM 323
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 40/44 (90%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR+RI ++MRALQEL+P+ NKTD+A+MLDE ++Y+K L+LQ++V
Sbjct: 35 RRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 78
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 158 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 204
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 40/46 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LS
Sbjct: 168 RRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQMLS 213
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 209 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI++R+RALQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 212 RRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLAT 258
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +MRALQ+L+P+ NK D+A+ML E +DY+K L+LQV+++SM
Sbjct: 387 RRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSM 433
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 44/54 (81%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RR+RI ++M+ALQEL+P NK+D+A+MLDE +DY+K L+LQV+ + + ++ + G
Sbjct: 270 RRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQLMQMMSMG 323
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +MRALQ+L+P+ NK D+A+ML E +DY+K L+LQV+++SM
Sbjct: 393 RRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSM 439
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 281 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNG 340
Query: 81 ADVPLSS 87
D+ LSS
Sbjct: 341 MDIGLSS 347
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella
moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella
moellendorffii]
Length = 89
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 45/57 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
RR+RI ++MRALQEL+P+ NKTD+A+MLDE ++Y+K L+LQ++V + L ++ +
Sbjct: 29 RRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVPKIELLHSSHTFS 85
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 284 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNG 343
Query: 81 ADVPLSS 87
D+ LSS
Sbjct: 344 MDIGLSS 350
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LS+
Sbjct: 173 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL 219
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 283 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNG 342
Query: 81 ADVPLSS 87
D+ LSS
Sbjct: 343 MDIGLSS 349
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 284 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNG 343
Query: 81 ADVPLSS 87
D+ LSS
Sbjct: 344 MDIGLSS 350
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 368
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 368
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 318 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 367
>gi|359479869|ref|XP_003632365.1| PREDICTED: uncharacterized protein LOC100853547 [Vitis vinifera]
Length = 352
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVP 84
I++R++ALQ L+P + +A++LD+I+DY+K L+LQ+K LS SRLG +
Sbjct: 240 ISERLKALQVLLPHS-EGGKASVLDDIIDYIKHLQLQIKDLSQSRLGGQSTSDPFIF--- 295
Query: 85 LSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLAS 144
++G ++ + E+ + KL+E + A Q L+ + L +MP++L
Sbjct: 296 ---------LEGYGHYILHDQMLKEPLEEMMGKLLEVNPSEATQLLEGRGLYVMPMTLVE 346
Query: 145 AIYRT 149
+ +T
Sbjct: 347 GLLQT 351
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVPSCNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 48 RVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 97
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 262 RVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSM 311
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM ++ A+ V
Sbjct: 162 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSM-KIAASNPVV 220
Query: 78 QLVADVPLSSALEGES----IDGGSSQPE 102
+ LS A+ + I GG + E
Sbjct: 221 SFAS---LSGAMSFDDIWREIGGGDGERE 246
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RMR LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM + V
Sbjct: 152 RVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVY 211
Query: 78 QLVADV 83
+D+
Sbjct: 212 DFGSDL 217
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLGAAGAVAQL 79
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 116 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQALAVMNGLGLNPMRLPP 175
Query: 80 V---ADVPLSSALEGESIDGGS 98
V ++ LE E++ GGS
Sbjct: 176 VMQPTQTRINETLEQETLLGGS 197
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 306 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFLSM 355
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 272 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 321
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 388 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 437
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 368
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 388 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 437
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 105 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 105 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 307 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 356
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 105 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 279 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 328
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 154 RLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSM 203
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQELVP CNK D+A+ML+E+++Y+K L++QV+ +SM
Sbjct: 232 RRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSM 279
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI + M+ALQ L+P+ NKTD+A MLDE +DY+K L+LQV++LS+
Sbjct: 87 RRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLSL 133
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI++R+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 225 RRERISERLRTLQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLAT 271
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 317 RVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V+YVKFL+LQ+K+LS L A
Sbjct: 282 RRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPFAHNG 341
Query: 81 ADVPLS 86
D+ L+
Sbjct: 342 LDIGLN 347
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 207 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSM 256
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 207 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSM 256
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 161 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 210
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 201 RVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSM 250
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM +L
Sbjct: 183 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM-KLATVNPAL 241
Query: 78 QLVAD 82
+ +D
Sbjct: 242 EFNSD 246
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 253 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 302
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 389 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 438
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 154 RLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSM 203
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 40/44 (90%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR+RI ++MRALQEL+P+ NKTD+A+ML+E ++Y+K L+LQ++V
Sbjct: 35 RRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQLQV 78
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 374 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 423
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RM+ LQ LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 97 RVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSM 146
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+FL+ QV+ LSM
Sbjct: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 362 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 411
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 385 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 434
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 38/45 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L
Sbjct: 137 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RM+ LQ LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 127 RVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSM 176
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 268 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 317
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 317 RVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 313
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
+ M SL+ + RRERI +++R LQ+L+P+ K D + ML+E V YVKFL+LQ+KVLS
Sbjct: 171 KNMQSLY--AKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVLSSD 228
Query: 69 RLGAAGAVAQLVADVPLSSAL 89
+A D+ L+ AL
Sbjct: 229 ETWMYAPLAYNGMDIGLTLAL 249
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 313
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 270 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSM 319
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 315 RVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 364
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPLSSAL 89
D+ L L
Sbjct: 315 MDIGLQQKL 323
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 257 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 306
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++Y++ L+ QV+ LSM
Sbjct: 64 RVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSM 113
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 272 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 321
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-----GAAGA 75
RRERI++R++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+ G
Sbjct: 257 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKPPE 316
Query: 76 VAQL--VADVPLSSALEGES 93
++Q+ V DV LSS E S
Sbjct: 317 ISQVKEVIDVILSSQRERSS 336
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 232 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSM 281
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPLSSAL 89
D+ L L
Sbjct: 315 MDIGLQQKL 323
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella
moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella
moellendorffii]
Length = 64
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 40/45 (88%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RR+RI +RM+ALQEL+P+ NKTD+A+MLDE ++Y+K L+ Q++V+
Sbjct: 20 RRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RMR LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM + V
Sbjct: 153 RVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSISPVVY 212
Query: 78 QLVADV 83
+D+
Sbjct: 213 DFGSDL 218
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I++RM LQ+LVP CN+ T +A MLDEI++YV+ L+ QV+ LSM +L +
Sbjct: 209 RREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM-KLATVNPRMEF 267
Query: 80 VADVPLSSAL--EGESI 94
A+ LS+ + GES+
Sbjct: 268 NANASLSTEMIQPGESL 284
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-----GAAGA 75
RRERI++R++ LQ+LVP+ +K D ML++ + YVKFL+LQVKVL+ L G A
Sbjct: 249 RRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDELWPVQGGKAPD 308
Query: 76 VAQLVADVPLSSALEGESIDGGSS 99
++Q+ + + L ++ DG SS
Sbjct: 309 ISQVKE--AIDALLSSQTKDGNSS 330
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 104 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQLQVQTLAVMNGLG 155
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR+R LQ LVP K D A+MLDE + YVKFL+LQ++ L
Sbjct: 450 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTL 494
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 57 RRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM 103
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 321 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSM 370
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 57 RRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM 103
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 41/50 (82%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RR++I + M+ALQEL+P C KTDR++MLD++++YVK L+ Q+++ SM +
Sbjct: 289 RRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHV 338
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 267 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 314
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 59 RRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM 105
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR+R LQ++VP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 403 RRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKAL 447
>gi|218187811|gb|EEC70238.1| hypothetical protein OsI_01015 [Oryza sativa Indica Group]
Length = 402
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 20/130 (15%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS LG
Sbjct: 254 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLGQIEALSYPYLG----- 308
Query: 77 AQLVADVPL---SSALEGE-SIDGGSSQ-PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQ 131
Q + P+ + + GE S DG S+ P + DG +QQ K ++D L+
Sbjct: 309 -QCCSANPMQQQTGIMAGERSTDGLFSEFPAGQDAEKDGKKQQAKK--DDD-------LR 358
Query: 132 SKALCIMPIS 141
S+ LC++P+S
Sbjct: 359 SRGLCLVPVS 368
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RR+RI++RM+ LQ LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 263 RVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSM 312
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S +LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 247 QATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 306
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 101 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S +LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 259 QATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 318
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I++RM LQ+LVP CN+ T +A MLDEI++YV+ L+ QV+ LSM +L +
Sbjct: 212 RREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM-KLATVNPRMEF 270
Query: 80 VADVPLSSAL--EGESI 94
A+ LS+ + GES+
Sbjct: 271 NANAALSTEMIQPGESL 287
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+RALQELVPS K D MLD + YVKF+++Q++VL
Sbjct: 207 RRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVL 251
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 210 RVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSM 259
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RR +I ++M+ALQ LVP+ +KTD+A+MLD+ ++Y+K L+LQV++LSM R G L
Sbjct: 62 RRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM-RNGVYRPSVNLP 120
Query: 81 A---DVPLS---SALEGESIDGGSSQP 101
+P S +AL S+D S+ P
Sbjct: 121 GPPEHLPTSQMCAALNQNSVDASSNPP 147
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM RL A +
Sbjct: 202 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM-RLAAVNPRVEF 260
Query: 80 VADVPLSSALEGESIDG---GSSQPEWEKWSNDGTEQ 113
D L+S G +DG G S + ++W DG Q
Sbjct: 261 NLDSILASE-NGSLMDGNFNGESYHQLQQWPFDGYHQ 296
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 267 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 314
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+RALQELVPS K D MLD + YVKF+++Q++VL
Sbjct: 207 RRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVL 251
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 104 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 155
>gi|449464566|ref|XP_004150000.1| PREDICTED: uncharacterized protein LOC101208178 [Cucumis sativus]
gi|449526950|ref|XP_004170476.1| PREDICTED: uncharacterized LOC101208178 [Cucumis sativus]
Length = 356
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 33/130 (25%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ ALQ LV KTD +++L E + Y++FL QV+ LSM LG++
Sbjct: 257 LKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGSS---- 312
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
S+P ++K QQ + EE Q L+S+ LC+
Sbjct: 313 --------------------QSKP-YQK-------QQPGSIQEEGT-KPRQDLRSRGLCL 343
Query: 138 MPISLASAIY 147
MP+S AS I+
Sbjct: 344 MPLSCASFIH 353
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 43 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 92
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V+YVKFL+LQ+K+LS L +A
Sbjct: 279 RRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNG 338
Query: 81 ADVPLS 86
D+ L+
Sbjct: 339 LDIGLN 344
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER++DR+R LQ+LVP +K D A+MLDE Y+KFL+ QV+ L
Sbjct: 289 AARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 337
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 250 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 299
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 175
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 39/45 (86%)
Query: 22 RERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RERI +RM+ LQEL+P C KTD+ +ML+++++YVK L+LQ++++S
Sbjct: 1 RERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 45
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 273 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 322
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 215 RRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 164 KLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 213
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 272 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 321
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 138 RVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFLSM 187
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LSM
Sbjct: 87 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSM 133
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
Length = 66
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 40/45 (88%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RR+RI +RM+ALQEL+P+ NKTD+A+MLDE ++Y+K L+ Q++V+
Sbjct: 20 RRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 262 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 311
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I RM+ LQ+LVP+CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 312 RVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVEFLSM 361
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 215 RRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 210 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 259
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 15/67 (22%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNK---------------TDRAAMLDEIVDYVKFLRL 60
F +Q+RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+
Sbjct: 323 FHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQR 382
Query: 61 QVKVLSM 67
QV+ LSM
Sbjct: 383 QVEFLSM 389
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 134 RFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 183
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 217 RRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 262
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 645 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 694
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 199 RRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 244
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 15/67 (22%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNK---------------TDRAAMLDEIVDYVKFLRL 60
F +Q+RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+
Sbjct: 323 FHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQR 382
Query: 61 QVKVLSM 67
QV+ LSM
Sbjct: 383 QVEFLSM 389
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 323
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 39/44 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
I ++MRALQEL+P CNKTD+A++LDE ++Y+K L++QV+++ M+
Sbjct: 205 IKEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMT 248
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGA 72
++RRERI +RM+ LQ LVP CNK T +A ML+EI++YV+ L+ QV+ LSM G
Sbjct: 4 RVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGV 58
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M++LQ+LVP CNK T RA MLDEI++YV+ L+ QV+ LSM
Sbjct: 220 RREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFLSM 267
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 192 RLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLSM 241
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 276 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 325
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 209 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 258
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 15/67 (22%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNK---------------TDRAAMLDEIVDYVKFLRL 60
F +Q+RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+
Sbjct: 202 FHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQR 261
Query: 61 QVKVLSM 67
QV+ LSM
Sbjct: 262 QVEFLSM 268
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 276 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 325
>gi|218563528|sp|Q9M0X8.2|BH114_ARATH RecName: Full=Transcription factor bHLH114; AltName: Full=Basic
helix-loop-helix protein 114; Short=AtbHLH114;
Short=bHLH 114; AltName: Full=Transcription factor EN
65; AltName: Full=bHLH transcription factor bHLH114
Length = 298
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L+E V+Y+KFL+ QV VLS G+V Q
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQ 232
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF--LQSKALC 136
S +GE +EED + ++ L S+ LC
Sbjct: 233 QQCSNKKSINTQGE--------------------------VEEDECSPRRYVDLSSRGLC 266
Query: 137 IMPI 140
+MPI
Sbjct: 267 LMPI 270
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPL 85
D+ L
Sbjct: 315 MDIGL 319
>gi|7267277|emb|CAB81059.1| putative protein [Arabidopsis thaliana]
Length = 296
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L+E V+Y+KFL+ QV VLS G+V Q
Sbjct: 171 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQ 230
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF--LQSKALC 136
S +GE +EED + ++ L S+ LC
Sbjct: 231 QQCSNKKSINTQGE--------------------------VEEDECSPRRYVDLSSRGLC 264
Query: 137 IMPI 140
+MPI
Sbjct: 265 LMPI 268
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPL 85
D+ L
Sbjct: 315 MDIGL 319
>gi|22328848|ref|NP_193865.2| transcription factor bHLH103 [Arabidopsis thaliana]
gi|75304462|sp|Q8VZ22.1|BH103_ARATH RecName: Full=Transcription factor bHLH103; AltName: Full=Basic
helix-loop-helix protein 103; Short=AtbHLH103;
Short=bHLH 103; AltName: Full=Transcription factor EN
62; AltName: Full=bHLH transcription factor bHLH103
gi|17529154|gb|AAL38803.1| unknown protein [Arabidopsis thaliana]
gi|21689697|gb|AAM67470.1| unknown protein [Arabidopsis thaliana]
gi|332659043|gb|AEE84443.1| transcription factor bHLH103 [Arabidopsis thaliana]
Length = 301
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + +DY+KFL+ Q+ KV + L
Sbjct: 184 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHL 243
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q + Q L
Sbjct: 244 NSIGS---------------GE-------QKQWSDKSSNNTHNQNC--------SPRQDL 273
Query: 131 QSKALCIMPIS 141
+S+ LC+MPIS
Sbjct: 274 RSRGLCLMPIS 284
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRRE+I++RM+ LQ+LVP C K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 190 RLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSM 239
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 265 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 314
>gi|157086538|gb|ABV21210.1| At4g21340 [Arabidopsis thaliana]
Length = 301
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + +DY+KFL+ Q+ KV + L
Sbjct: 184 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHL 243
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q + Q L
Sbjct: 244 NSIGS---------------GE-------QKQWSDKSSNNTHNQNC--------SPRQDL 273
Query: 131 QSKALCIMPIS 141
+S+ LC+MPIS
Sbjct: 274 RSRGLCLMPIS 284
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 269 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 318
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 39/44 (88%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR++I RMR L+EL+P+CNKTD+A+MLD+ ++Y+K L+LQ++V
Sbjct: 763 RRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQV 806
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 242 RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLWMYAPIAYNG 301
Query: 81 ADVPL 85
D+ L
Sbjct: 302 MDIGL 306
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 210 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 259
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 202 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 261
Query: 81 ADVPLS 86
D+ L+
Sbjct: 262 MDIGLN 267
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR++ LQEL+P+ +K D ML++ ++YVKFL+LQVKVL
Sbjct: 426 RRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVKVL 470
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 210 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 259
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 227 RVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSM 276
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR++ LQEL+P+ +K D ML++ ++YVKFL+LQVKVL
Sbjct: 426 RRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVKVL 470
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
V ++RRERI++R++ LQ+LVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 176 VAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVLA 225
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K+LS + +A
Sbjct: 255 RRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEMWMFAPLAYNG 314
Query: 81 ADVPLSSAL 89
D+ L L
Sbjct: 315 MDIGLQHNL 323
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPLSSAL 89
D+ L+ +
Sbjct: 315 MDIGLNQKI 323
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 7 CHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
C + SL+ + RRERI +R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 161 CSKDTQSLY--AKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 218
>gi|124302210|gb|ABN05289.1| hypothetical protein At4g21340 [Arabidopsis thaliana]
Length = 301
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + +DY+KFL+ Q+ KV + L
Sbjct: 184 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHL 243
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q + Q L
Sbjct: 244 NSIGS---------------GE-------QKQWSDESSNNTHNQDC--------SPRQDL 273
Query: 131 QSKALCIMPIS 141
+S+ LC+MPIS
Sbjct: 274 RSRGLCLMPIS 284
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 282 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLWMYAPIAYNG 341
Query: 81 ADVPL 85
D+ L
Sbjct: 342 MDIGL 346
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 60 QATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLSM 119
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 121 RVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSM 170
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ+LVP +K D A+MLDE Y+KFL+ QV+ L
Sbjct: 300 AARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 348
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 141 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 190
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS + +A
Sbjct: 111 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMYAPIAYNG 170
Query: 81 ADVPLSS 87
D+ L +
Sbjct: 171 MDIGLQN 177
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 127 RVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 176
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 42/50 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RR+RI +M+ALQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+ +S+ +
Sbjct: 259 RRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAMSVRNM 308
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 220 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 269
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 323 QATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 382
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 127 RVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSM 176
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 423 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 472
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 127 RVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 176
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 58 RRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 104
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP ++ D A+MLDE Y+KFL+ QVK L
Sbjct: 298 AARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKAL 346
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 7 CHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
C + SL+ + RRERI +R+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 173 CSKDTQSLY--AKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 230
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS + +A
Sbjct: 305 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMYAPIAYNG 364
Query: 81 ADVPL 85
D+ L
Sbjct: 365 MDIGL 369
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ Q++ LSM +L A G
Sbjct: 140 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM-KLSAIG 195
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 220 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 269
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKV 64
++RRERI++RMR LQELVP C+K T +A MLDEI++YV+ L+ QV+V
Sbjct: 162 RVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEV 208
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 387 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 436
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS + +A
Sbjct: 305 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMYAPIAYNG 364
Query: 81 ADVPL 85
D+ L
Sbjct: 365 MDIGL 369
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 220 RVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 269
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 74 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 123
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 137 RVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSM 186
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 275 RVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSM 324
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 385 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 434
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 265 RRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 324
Query: 81 ADVPLS 86
D+ L+
Sbjct: 325 MDIGLN 330
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ Q++ LSM +L A G
Sbjct: 140 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM-KLSAIG 195
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 125 RVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 174
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
Q S ++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 135 QATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLS 193
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 447 QATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLSM 506
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 77 KVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 126
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 8/58 (13%)
Query: 21 RRERIADRMRALQELVPSCNK--------TDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RR+RI ++M+ALQEL+P CNK TD+A+MLDE ++Y+K L+LQV++ ++ L
Sbjct: 70 RRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKTLQLQVQIFVLNSL 127
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+KVLS
Sbjct: 233 RRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQLQIKVLS 278
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 318 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 367
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I ++M+ALQEL+P CNKTD+A+MLDE ++Y+K L+LQ++V+ M
Sbjct: 367 INEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWM 409
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ Q++ LSM +L A G
Sbjct: 144 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM-KLSAIG 199
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 220 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 265
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 225 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 274
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 42/47 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++M+ALQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+ +S+
Sbjct: 273 RRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFMSV 319
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ+LVP +K D A+MLDE Y+KFL+ QV+ L
Sbjct: 299 AARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 347
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 206 RVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 255
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MR LQ+L+P+ NKTD+A+ML+E ++Y+K L+ Q++V+ M
Sbjct: 372 RRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWM 418
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RR +I +R+R LQ++VP C KT A MLDEI++YV+ L+ QV+ LSM +L AA +
Sbjct: 169 RIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM-KLTAASSYH 227
Query: 78 QLVADVPLSSALEGESIDGGS 98
+D L+G+ I G+
Sbjct: 228 DFNSDSDAEDKLKGKEIREGN 248
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 156 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 215
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S + RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 104 QATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM 163
Query: 68 SRLGAAG 74
+L A G
Sbjct: 164 -KLSAIG 169
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 71
RR +I ++++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L M R G
Sbjct: 103 RRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-MVRNG 152
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S + RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 130 QATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM 189
Query: 68 SRLGAAG 74
+L A G
Sbjct: 190 -KLSAIG 195
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 136 RVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSM 185
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 293 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 342
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ+LVP CNK T +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 234 RVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLSM 283
>gi|79465433|ref|NP_192426.2| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|332657087|gb|AEE82487.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L+E V+Y+KFL+ QV VLS G+V Q
Sbjct: 113 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQ 172
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF--LQSKALC 136
S +GE +EED + ++ L S+ LC
Sbjct: 173 QQCSNKKSINTQGE--------------------------VEEDECSPRRYVDLSSRGLC 206
Query: 137 IMPI 140
+MPI
Sbjct: 207 LMPI 210
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R++ LQ LVP+ K D + ML+E V+YVKFL+LQ+K+LS L +A
Sbjct: 277 RRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPLAYNG 336
Query: 81 ADVPL 85
D+ L
Sbjct: 337 MDIGL 341
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 369 RVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 418
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MR LQ+L+P+ NKTD+A+ML+E ++Y+K L+ Q++V+ M
Sbjct: 372 RRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWM 418
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RRERI+DR++ LQELVP+ K D ML++ ++YVKFL+LQVKV
Sbjct: 376 RRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKV 419
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 644 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 693
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ+L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 169 RRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLS 214
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ+LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 350 RRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 394
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 227 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 286
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-----GAAGA 75
RRERI++R++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+ G A
Sbjct: 243 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPD 302
Query: 76 VAQL 79
V+Q+
Sbjct: 303 VSQV 306
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 644 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 693
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 644 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 693
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 420 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 469
>gi|297797519|ref|XP_002866644.1| hypothetical protein ARALYDRAFT_496718 [Arabidopsis lyrata subsp.
lyrata]
gi|297312479|gb|EFH42903.1| hypothetical protein ARALYDRAFT_496718 [Arabidopsis lyrata subsp.
lyrata]
Length = 341
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RR+RI D ++AL +L+P + D + L+ IVD+VK L+LQ+K LS SRLG
Sbjct: 227 RRQRIDDNIKALGKLLPHKVEGDSPGLTLNAIVDHVKLLQLQMKELSRSRLGE------- 279
Query: 80 VADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMP 139
P+S + I+G E+ E+ + ++ D+ AA L+SK L +MP
Sbjct: 280 ----PVSHPM--TFIEGYGHYIHHEQTVTKSLEEVMEDMLTNDLDAAANLLESKGLYLMP 333
Query: 140 IS 141
+S
Sbjct: 334 LS 335
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ LVP+ K D + ML+E V+YVKFL+LQ+K+LS
Sbjct: 228 RRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLS 273
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I +RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 262 QATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 321
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++RRERI++R++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 212 AAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEF 265
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 66 RRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 112
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM +L A V
Sbjct: 239 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSM-KLSAVNPV 296
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 66 RRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 112
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++RRERI++R++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 213 AAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEF 266
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S + RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 104 QATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM 163
Query: 68 SRLGAAG 74
+L A G
Sbjct: 164 -KLSAIG 169
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 280 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 329
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 268 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 317
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 141 RVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 190
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 154 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 203
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 38/45 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RR++I++R+R L++L+P NK D A MLDE ++YVKFL+LQV++L
Sbjct: 26 RRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 296 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 345
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 44 RRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 90
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 280 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 329
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 268 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 317
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 284 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSM 343
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI DR+R LQ LVP+ K D + ML+E V YVKFL+LQ K+LS L +A
Sbjct: 258 RRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQNKLLSSDDLWMYAPIAYNG 317
Query: 81 ADVPLS 86
D+ L+
Sbjct: 318 LDLVLN 323
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 296 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 345
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR+R LQ +VP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 216 RRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKAL 260
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM +L A V
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSM-KLSAVNPV 245
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 205 RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 250
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 162 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 211
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 282 RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDL 331
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++RMR LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 175 RRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 219
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSM 208
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 156 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 205
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS +
Sbjct: 234 RRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEM 283
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R++ LQ LVP+ K D + ML+E V+YVKFL+LQ+K+LS L +A
Sbjct: 272 RRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPLAYNG 331
Query: 81 ADVPL 85
D+ L
Sbjct: 332 MDIGL 336
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R++ LQ LVP+ K D + ML+E V+YVKFL+LQ+K+LS L +A
Sbjct: 273 RRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPLAYNG 332
Query: 81 ADVPL 85
D+ L
Sbjct: 333 MDIGL 337
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 205 RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 250
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 282 RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDL 331
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+L+P CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 208 RVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSM 257
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 139 RFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 188
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA 73
++RRERI++RM+ LQELVP C+K +A+ LDEI++YV+ L+ QV+ LSM +L AA
Sbjct: 148 RVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSM-KLAAA 202
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 264 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSM 323
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 122 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 171
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 123 RVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 172
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
S ++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 84 SHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 139
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 205 RREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSM 252
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 185 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 234
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 147 RVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSM 196
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
+ + RR+RI +R+R LQEL+P+ K D + ML+E + YVKFL LQ+K+LS
Sbjct: 121 YYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 155 RVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 204
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
S ++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 280 SHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 335
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 201 RVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 250
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++RRERI++R++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 208 KVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEF 259
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 357 RVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 406
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP ++ D A+MLDE Y+KFL+ QVK L
Sbjct: 293 AARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 341
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 155 RVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 204
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+L+P CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 208 RVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSM 257
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 257 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM +L A V
Sbjct: 184 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSM-KLSAVNPV 241
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 357 RVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 406
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 385 RVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 434
>gi|297596380|ref|NP_001042492.2| Os01g0230200 [Oryza sativa Japonica Group]
gi|56783868|dbj|BAD81280.1| unknown protein [Oryza sativa Japonica Group]
gi|56783891|dbj|BAD81328.1| unknown protein [Oryza sativa Japonica Group]
gi|215686798|dbj|BAG89648.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673026|dbj|BAF04406.2| Os01g0230200 [Oryza sativa Japonica Group]
Length = 406
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 20/130 (15%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS LG
Sbjct: 254 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLGQIEALSYPYLG----- 308
Query: 77 AQLVADVPL---SSALEGE-SIDGGSSQ-PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQ 131
Q + P+ + + GE S DG + P + DG +QQ K ++D L+
Sbjct: 309 -QCCSANPMQQQTGIMAGERSTDGLFPEFPAGQDAEKDGKKQQAKK--DDD-------LR 358
Query: 132 SKALCIMPIS 141
S+ LC++P+S
Sbjct: 359 SRGLCLVPVS 368
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 355 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 404
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 138 RVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 187
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP ++ D A+MLDE Y+KFL+ QVK L
Sbjct: 294 AARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 342
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 295 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 344
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
+ + RR+RI +R+R LQEL+P+ K D + ML+E + YVKFL LQ+K+LS
Sbjct: 121 YYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP CNK A+ LDEI+++V+FL+ QV++LSM RL A
Sbjct: 200 RREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEILSM-RLAAVNPRIDF 258
Query: 80 VADVPLSS 87
D LS+
Sbjct: 259 NLDSMLSA 266
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQELVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 341 RVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 390
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 388 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 437
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+ M G+ A A ++
Sbjct: 272 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWM---GSGMAAAPMM 324
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 12/77 (15%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RM+ LQ+LVP C++ T + +LDEI++YV+ L+ QV++LSM
Sbjct: 221 RVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVELLSMK--------- 271
Query: 78 QLVADVPLSSALEGESI 94
+A V L S+LE E I
Sbjct: 272 --LASVGLESSLEAEQI 286
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 190 RVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 239
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI DR++ LQ LVP+ K D + ML++ V YVKFL+LQ+K+LS L
Sbjct: 151 RRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSDDL 200
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 190 RVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 239
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 92 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 141
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL
Sbjct: 151 RRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 195
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S ++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 245 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 304
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 366 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 415
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 236 RRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 281
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI++R++ LQELVP+ +K D ML++ + YVKFL+LQVK+L+
Sbjct: 199 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEF 248
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella
moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella
moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella
moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella
moellendorffii]
Length = 125
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 49 RVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFLSM 98
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ+LVP CNK T RA MLDEI++YV+ L+ QV+ +SM
Sbjct: 55 RREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFISM 102
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL
Sbjct: 219 RRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI DR++ LQ LVP+ K D + ML++ V YVKFL+LQ+K+LS
Sbjct: 150 RRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 402 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 451
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 163 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 212
>gi|356498752|ref|XP_003518213.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 78
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 29 MRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
M+ALQELV + NKTD+A+MLDEI+DYV+FL+LQVK S L A+++
Sbjct: 1 MKALQELVTNANKTDKASMLDEIIDYVRFLQLQVKGTPSSNLANHVDFAKVL 52
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 180 RVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 229
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI +++R LQ+LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 352 RRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 396
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 404 RVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESLSM 453
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 209
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+LRR++I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 47 RLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSM 96
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 203 RREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSM 250
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 19/114 (16%)
Query: 4 CLCCHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQV 62
C C ++ + RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV
Sbjct: 207 CRCIGVSVY-----INARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 261
Query: 63 KVLSMSRLGAAGAVAQLVADVPLSS----ALEGESIDGGS---------SQPEW 103
+ LSM + V PL + ++ GS SQPEW
Sbjct: 262 EFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGSQPEW 315
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++RRERI++R++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 228 AAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 277
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 139 RVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 188
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVAQL 79
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL+ A G A
Sbjct: 211 RRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWPAQGGKAPD 270
Query: 80 VADV 83
++ V
Sbjct: 271 ISQV 274
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 203 RREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSM 250
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 186 RREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSM 233
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 38/44 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR+RI +M+ LQ+LVP+ +KTD+A+MLDE++DY+K L+ QV+V
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 56
>gi|224108413|ref|XP_002314839.1| predicted protein [Populus trichocarpa]
gi|222863879|gb|EEF01010.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 44/55 (80%)
Query: 22 RERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
R+RI ++RALQEL+P+C+K DR +ML++ V+Y+K L+LQV+V+++S + A+
Sbjct: 34 RDRIKGKLRALQELIPNCHKQDRPSMLEDAVEYLKALKLQVEVITLSVIAVLQAL 88
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 196 RVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 245
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVAQL 79
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL+ A G A
Sbjct: 213 RRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWPAQGGKAPD 272
Query: 80 VADV 83
++ V
Sbjct: 273 ISQV 276
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 169 RVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 218
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ LVP+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 77 RRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 123
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 401 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 450
>gi|357166163|ref|XP_003580620.1| PREDICTED: uncharacterized protein LOC100837038 [Brachypodium
distachyon]
Length = 466
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 27/130 (20%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++YVKFL QV VLS L
Sbjct: 347 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYVKFLHDQVGVLSAPYLKNGNHH 406
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
V SS S+ P +K S DG+E L+ + LC
Sbjct: 407 HHQVPQYLKSS----------SASP--DKPSKDGSEVS---------------LKGRGLC 439
Query: 137 IMPISLASAI 146
++PIS A+
Sbjct: 440 LVPISSTFAV 449
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RRERI+DR+R LQ LVP K D A+MLDE + Y+KFL+ Q++ L +LG G
Sbjct: 381 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYIKFLKQQLQTL--EQLGIDG 432
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S + RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 132 QATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSM 191
Query: 68 SRLGAAGAVAQLVADV 83
+L A A A +V
Sbjct: 192 -KLEAVNAQANQGVEV 206
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 164 RVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 213
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 203 RREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSM 250
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL
Sbjct: 219 RRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|294462676|gb|ADE76883.1| unknown [Picea sitchensis]
Length = 244
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 33/36 (91%)
Query: 29 MRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
MRALQEL+P CNK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 1 MRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQI 36
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine
max]
Length = 110
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI++R++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 35 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 80
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 163 RVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFY 222
Query: 78 QLVADV 83
L D+
Sbjct: 223 DLATDL 228
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 12/77 (15%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RM+ LQ+LVP C++ T + +LDEI++YV+ L+ QV+ LSM
Sbjct: 221 RVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMK--------- 271
Query: 78 QLVADVPLSSALEGESI 94
+A V L S+LE E I
Sbjct: 272 --LASVGLESSLEAEQI 286
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R++ LQ LVP+ K D + ML+E V YV FL+LQ+K+LS L +A
Sbjct: 290 RRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQIKLLSSDDLWMYAPLAYNG 349
Query: 81 ADVPLSSAL 89
D+ L+ L
Sbjct: 350 IDIGLNQKL 358
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 374 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 423
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 24 RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSM 71
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 242 RRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 287
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 214 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 259
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +M+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+++S+
Sbjct: 235 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 281
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 180 RVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 229
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-----GAAGA 75
RRERI++R++ LQ+LVP+ +K D ML++ + YVKFL+LQVKVL+ G A
Sbjct: 245 RRERISERLKMLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPD 304
Query: 76 VAQLVA--DVPLSS 87
++Q+ D LSS
Sbjct: 305 ISQVKGAIDATLSS 318
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 203 RREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSM 250
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LS+
Sbjct: 208 RREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSL 255
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RRERI+DR+R LQ LVP K D A+MLDE + YVKFL+LQ++V
Sbjct: 14 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQV 57
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 125 RLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 384 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 433
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 289 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 333
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LS+
Sbjct: 208 RREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSL 255
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
Q S + RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 130 QATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSM 189
Query: 68 SRLGAAGAVAQ 78
+L A A A
Sbjct: 190 -KLEAVNAHAN 199
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +M+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+++S+
Sbjct: 197 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 243
>gi|356546702|ref|XP_003541762.1| PREDICTED: transcription factor bHLH112-like [Glycine max]
Length = 437
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 34/125 (27%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + GA
Sbjct: 322 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNNGAP 381
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
Q QQ +++ GA Q L+S+ LC
Sbjct: 382 IQ---------------------------------HQQDCDNLKDSEGAK-QDLRSRGLC 407
Query: 137 IMPIS 141
++PIS
Sbjct: 408 LVPIS 412
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPL 85
D+ L
Sbjct: 315 MDIGL 319
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L++Q++V+ M
Sbjct: 270 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVMWM 312
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 143 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 190
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RMR LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 155 RVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 204
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 143 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 190
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 287 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 37/41 (90%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 37/41 (90%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 279 RVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSM 328
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 37/41 (90%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 40/46 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+++S
Sbjct: 295 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMS 340
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 155 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 202
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM RL A
Sbjct: 203 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSM-RLAAVNPRIDF 261
Query: 80 VADVPLSSALEGESIDG---GSSQPEWEKWSNDGTEQ 113
D L+S G +DG S + ++W DG Q
Sbjct: 262 NLDSILASE-NGSLMDGSFNAESYHQLQQWPFDGYHQ 297
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 80 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 129
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 222 RRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQLQIKLLSSDEL 271
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 37/41 (90%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 252 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 292
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 316 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 360
>gi|297813903|ref|XP_002874835.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320672|gb|EFH51094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L+E V+Y+KFL+ QV VLS G+V Q
Sbjct: 174 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPDQNTIGSVQQ 233
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 279 RVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSM 328
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVPSC+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 41 RVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQIEFLSM 90
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RRERI+DR+R LQ LVP K D A+MLDE + YVKFL+LQ++
Sbjct: 44 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQ 86
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 89 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSM 138
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 37/43 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RR++I RM+ LQ+LVP+ NKTD+A+MLDE+++Y+K L+ QV+
Sbjct: 305 RRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 37/43 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RR++I RM+ LQ+LVP+ NKTD+A+MLDE+++Y+K L+ QV+
Sbjct: 305 RRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>gi|226492755|ref|NP_001152376.1| DNA binding protein [Zea mays]
gi|195655687|gb|ACG47311.1| DNA binding protein [Zea mays]
Length = 455
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 30/137 (21%)
Query: 10 QMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
Q S ++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS
Sbjct: 330 QTPSPLPTFKVRKEKVGDRVTALQQLVAPFGKTDTASVLHETIEYIKFLHDQVGVLSAPY 389
Query: 70 LGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF 129
L + G P ++ S D +E + E
Sbjct: 390 L-----------------------KNNGHQVPYLKRSSPDRSEDDSSHAGERS------- 419
Query: 130 LQSKALCIMPISLASAI 146
L+ + LC++PIS A+
Sbjct: 420 LKGRGLCLVPISSTFAV 436
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>gi|388500584|gb|AFK38358.1| unknown [Lotus japonicus]
Length = 444
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 36/125 (28%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E +DY+KFL QV VLS + +GA
Sbjct: 329 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHDQVNVLSTPYM-KSGAP 387
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
Q + GT V + EED L+ + LC
Sbjct: 388 IQ----------------------------NQQGTCDNVKESSEED-------LRRRGLC 412
Query: 137 IMPIS 141
++PIS
Sbjct: 413 LVPIS 417
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 281 RVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSM 330
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 188 RVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 237
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRERI++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 190 RVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFLSM 239
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 151 RVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLSM 200
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L++Q++V+ M
Sbjct: 276 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVMWM 318
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 143 RRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQIRLL 187
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ +KTD+A+MLDE ++Y+K L+LQV+ LS+
Sbjct: 150 RRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQGLSV 196
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 38/44 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR+RI +M+ LQ+LVP+ +KTD+A+MLDE++DY+K L+ QV+V
Sbjct: 287 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 330
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+++LS
Sbjct: 231 RRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLS 276
>gi|297604078|ref|NP_001054971.2| Os05g0228400 [Oryza sativa Japonica Group]
gi|57863904|gb|AAS79766.2| unknown protein [Oryza sativa Japonica Group]
gi|255676146|dbj|BAF16885.2| Os05g0228400 [Oryza sativa Japonica Group]
Length = 268
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS +G A
Sbjct: 122 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALSYPYMGDANGT 181
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKW---SNDGTEQQVAKLMEEDIGA---AMQFL 130
P+ + GE G PE+ N T Q E GA + L
Sbjct: 182 G------PMQNGPVGERNPG--LFPEYPGQLLNHNGNTGAQQPAAQPEQQGANDDGKKDL 233
Query: 131 QSKALCIMPISLAS 144
+S+ LC++P+S S
Sbjct: 234 RSRGLCLVPVSCTS 247
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 71
RRERI+DR+R LQ VP K D A+MLDE + YVKFL+ Q++ L R+G
Sbjct: 400 RRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTL--ERIG 448
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-----GAAGA 75
RRERI++R++ LQ+LVP+ +K D ML++ + YVKFL+LQVKVL+ G A
Sbjct: 265 RRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPD 324
Query: 76 VAQL 79
++Q+
Sbjct: 325 ISQV 328
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE +Y KFLR QVK L
Sbjct: 287 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKAL 331
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 172 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 221
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 7/54 (12%)
Query: 25 IADRMRALQELVPSCNKT-------DRAAMLDEIVDYVKFLRLQVKVLSMSRLG 71
I +RMRALQEL+P+CNK D+A+MLDE ++Y+K L+LQ++++SM G
Sbjct: 445 INERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKSLQLQLQIMSMGGGG 498
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG--AVAQ 78
RR++I++R+R L++LVP NK D A+MLDE + +VKFL++QV++L G G
Sbjct: 396 RRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVGNGGHGNYGANN 455
Query: 79 LVADVPLS 86
+VPL+
Sbjct: 456 HCLNVPLN 463
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ+LVP+ K D + ML+E YVKFL+LQ+K+LS
Sbjct: 208 RRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 253
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG--AVAQ 78
RR++I++R+R L++LVP NK D A+MLDE + +VKFL++QV++L G G
Sbjct: 396 RRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVGNGGHGNYGANN 455
Query: 79 LVADVPLS 86
+VPL+
Sbjct: 456 HCLNVPLN 463
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 92 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSM 141
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 111 RRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSM 158
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 173 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 222
>gi|356519519|ref|XP_003528420.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 495
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 35/125 (28%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS S + GA
Sbjct: 380 TFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYM-KNGAP 438
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
Q +QQ +++ G Q L+SK LC
Sbjct: 439 TQ---------------------------------QQQGCDDLKDSEG-PQQDLKSKGLC 464
Query: 137 IMPIS 141
++PIS
Sbjct: 465 LVPIS 469
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 173 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 222
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 172 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 221
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 173 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 222
>gi|26451339|dbj|BAC42770.1| unknown protein [Arabidopsis thaliana]
Length = 344
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
R++RIAD ++AL +L+P + D + L+ +VD+VK L LQ+K LS SRLG
Sbjct: 229 RKQRIADNIKALGKLLPHKVEGDNHELTLNAMVDHVKLLHLQMKELSRSRLGGE------ 282
Query: 80 VADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMP 139
P+S + I+G E+ E+ + L+ +D AA L+SK L + P
Sbjct: 283 ----PISHPM--AFIEGYGHYIHHEQTMAKSLEEVMEDLLTKDFDAAANLLESKGLYLTP 336
Query: 140 IS 141
+S
Sbjct: 337 LS 338
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 250 RRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 85 RVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSM 134
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 250 RRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 173 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 222
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 250 RRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRE+I +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 264 RREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDL 313
>gi|255555107|ref|XP_002518591.1| transcription factor, putative [Ricinus communis]
gi|223542436|gb|EEF43978.1| transcription factor, putative [Ricinus communis]
Length = 494
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 36/125 (28%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + +
Sbjct: 383 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGNPI 442
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
QQ KL E + Q L+S+ LC
Sbjct: 443 QH----------------------------------QQAEKLKETE--GLKQDLKSRGLC 466
Query: 137 IMPIS 141
++PIS
Sbjct: 467 LVPIS 471
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++RRE+IA++++ LQ+LVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 208 AAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLA 257
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 188 RVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 237
>gi|15238316|ref|NP_201303.1| uncharacterized protein [Arabidopsis thaliana]
gi|8843762|dbj|BAA97310.1| unnamed protein product [Arabidopsis thaliana]
gi|115646849|gb|ABJ17139.1| At5g64980 [Arabidopsis thaliana]
gi|332010595|gb|AED97978.1| uncharacterized protein [Arabidopsis thaliana]
Length = 344
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
R++RIAD ++AL +L+P + D + L+ +VD+VK L LQ+K LS SRLG
Sbjct: 229 RKQRIADNIKALGKLLPHKVEGDNHELTLNAMVDHVKLLHLQMKELSRSRLGGE------ 282
Query: 80 VADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMP 139
P+S + I+G E+ E+ + L+ +D AA L+SK L + P
Sbjct: 283 ----PISHPM--AFIEGYGHYIHHEQTMAKSLEEVMEDLLTKDFDAAANLLESKGLYLTP 336
Query: 140 IS 141
+S
Sbjct: 337 LS 338
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL++Q+K+LS
Sbjct: 256 RRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLLS 301
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 37/43 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RRE+I +MR L++L+P+CNK D+A+MLD+ +DY+K L+LQ++
Sbjct: 348 RREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQ 390
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 15 FFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA 73
+ ++ RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM +L A
Sbjct: 152 YLLLVARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM-KLEAV 210
Query: 74 GAVAQL 79
+ A L
Sbjct: 211 NSRANL 216
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ LVP+ K D + ML+E YVKFL+LQ+K+LS
Sbjct: 214 RRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 259
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 225 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGA 72
RRERI++++R LQ +VP K D A+MLDE + YVKFL+ Q+K L GA
Sbjct: 189 RRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSLQERASGA 240
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 163 RRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 207
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 146 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSM 193
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
++RRE+IA++++ LQ+LVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 242 AAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLA 291
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 172 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 221
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 25/117 (21%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RM+ LQ+LVP CNK T +A +L+ I++YV+ L+ QV++LS
Sbjct: 128 RVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQVEILS----------- 176
Query: 78 QLVADVPLSSALEGESID-GGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
V L+S L D + P E WSN + E+ G+ M + Q K
Sbjct: 177 -----VKLTSVLSRCHFDLQINGHPSKEHWSN-------VRETEDFHGSLMHYKQHK 221
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 225 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 155 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 200
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRE+I +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 185 RREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 234
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI+ YV+ L+ QV+ LSM
Sbjct: 196 RVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSM 245
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
V + RRERI++R+R LQ LVP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 167 VARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI+ YV+ L+ QV+ LSM
Sbjct: 196 RVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSM 245
>gi|218196320|gb|EEC78747.1| hypothetical protein OsI_18962 [Oryza sativa Indica Group]
Length = 415
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS +G A
Sbjct: 269 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALSYPYMGDANGT 328
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKW---SNDGTEQQVAKLMEEDIGA---AMQFL 130
P+ + GE G PE+ N T Q E GA + L
Sbjct: 329 G------PMQNGPVGERNPG--LFPEYPGQLLNHNGNTGAQQPAAQPEQQGANDDGKKDL 380
Query: 131 QSKALCIMPISLASAIYRTRQPD--APA 156
+S+ LC++P+S S D APA
Sbjct: 381 RSRGLCLVPVSCTSHFGGDNAADYWAPA 408
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I +RM+ALQEL+P C++TD+A++LDE +DY+K L++Q++V+ M
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWM 314
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRE+I +R+R LQ LVP+ K D + ML++ + YVKFL+LQ+K+LS
Sbjct: 202 RREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLS 247
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 174 RVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSM 223
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I +RM+ALQEL+P C++TD+A++LDE +DY+K L++Q++V+ M
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWM 314
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+K+L
Sbjct: 132 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLL 176
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 170 RFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 219
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRE+I +R+R LQ LVP+ K D + ML++ + YVKFL+LQ+K+LS
Sbjct: 216 RREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLS 261
>gi|359496230|ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
gi|297735889|emb|CBI18658.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 35/125 (28%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS +
Sbjct: 352 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYM------ 405
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+G QP QQ ++ +++ G+ Q L+S+ LC
Sbjct: 406 -----------------KNGAPIQP-----------QQTSEKLKDTEGSK-QDLRSRGLC 436
Query: 137 IMPIS 141
++PIS
Sbjct: 437 LVPIS 441
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 18/99 (18%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM------SRLGAA 73
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM SRL +
Sbjct: 164 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSG 223
Query: 74 ---------GAVAQLVADVPLSSALEGESIDGGSSQPEW 103
G A A +P S E G S P+W
Sbjct: 224 IEAFPPKDFGQQAFDPAGIPFGSQAPREYSRG--SSPDW 260
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRE+I +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 185 RREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 234
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 241 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 287
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM +
Sbjct: 175 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHT 234
Query: 80 VADVPL 85
V PL
Sbjct: 235 VEGFPL 240
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I +RM+ALQEL+P C++TD+A++LDE +DY+K L++Q++V+ M
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWM 314
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM +
Sbjct: 160 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHT 219
Query: 80 VADVPL 85
V PL
Sbjct: 220 VEGFPL 225
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 201
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L QV+ LSM
Sbjct: 130 RREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSM 177
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRERI +R+R LQ LVP+ K D + ML+E V+YVKFL+ Q+KV ++ +
Sbjct: 292 RRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQIKVCTIGDI 341
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 201
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E + YVKFL+LQ+K+LS
Sbjct: 239 RRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 142 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 186
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E + YVKFL+LQ+K+LS
Sbjct: 239 RRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 313 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R+R LQ LVP+ K D + ML+E YVKFL+LQ+K+LS
Sbjct: 212 RRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 257
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 187 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 234
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 149 RREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 196
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 37/43 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RR++I + M+ALQEL+P C KTDR++MLD++++YVK L+ Q++
Sbjct: 289 RRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR+R LQ+LVP K D A+MLDE Y++FL+ QV+ L
Sbjct: 330 RRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDL 374
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 311 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 357
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 152 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 199
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 137 RREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM 184
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 130 RREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 177
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RRERI+ ++R LQ LVP K D A+MLDE V YVKFL+ QV+ L S
Sbjct: 124 RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQS 171
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R++ LQ LVP K D A+MLDE + YVKFL+ QV+ L
Sbjct: 148 RRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 192
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 187 RVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 236
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K + LDEI+++V+ L+ QV++LSM RL A
Sbjct: 203 RREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQRQVEMLSM-RLAAVNPRIDF 261
Query: 80 VADVPLSSALEGESIDG---GSSQPEWEKWSNDGTEQ 113
D L+S G +DG S + ++W DG Q
Sbjct: 262 NLDSILASE-NGSLMDGSFNAESYHQLQQWPFDGYHQ 297
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 147 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 191
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ++VP CNK T +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 159 RREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFLSM 206
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 7/60 (11%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM------SRLGAA 73
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM SR+G
Sbjct: 189 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPG 248
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
+ RRE+I RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 170 RFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 219
>gi|293336192|ref|NP_001169880.1| uncharacterized protein LOC100383774 [Zea mays]
gi|224032155|gb|ACN35153.1| unknown [Zea mays]
Length = 421
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS L
Sbjct: 342 TFKVRKEKLGDRITALQQLVAPFGKTDTASVLHETIEYIKFLHDQVGVLSAPYL 395
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 19/117 (16%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+ RL A QL
Sbjct: 231 RRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQI------RLILCEASPQLT 284
Query: 81 ADVPLSSALEGESIDGGSSQPEWEKW-SNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+S +GG + E K S DG +Q +L + I +++ +Q + C
Sbjct: 285 -----------DSRNGGDTSNEAHKRNSTDGNNKQTCEL-DAFIYKSLEGIQDQEFC 329
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 40/46 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV++++
Sbjct: 282 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMN 327
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+++LS
Sbjct: 244 RRERINERLKILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIRLLS 289
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 111 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 155
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 169 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 216
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella
moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella
moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella
moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella
moellendorffii]
Length = 102
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 32 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 81
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 7/58 (12%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM------SRLG 71
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM SR+G
Sbjct: 164 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMG 221
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 113 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 160
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI +++R LQ+L+P+ K D + ML+E V YVKFL+LQ+K+L
Sbjct: 185 RRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLL 229
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 169 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 216
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 77 RREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSM 124
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 40/47 (85%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR++I +MRALQ L+P+ +K D+A+MLD+ ++Y+K L+LQ++++SM
Sbjct: 392 RRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQLQLQMMSM 438
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRER+++R+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 283 AARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 331
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 155 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 199
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI+DR+R LQ+LVP K D A+MLDE Y++FL+ QV+ L
Sbjct: 384 RRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDL 428
>gi|414585296|tpg|DAA35867.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 463
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS L G
Sbjct: 342 TFKVRKEKLGDRITALQQLVAPFGKTDTASVLHETIEYIKFLHDQVGVLSAPYLKNNG 399
>gi|449511629|ref|XP_004164011.1| PREDICTED: transcription factor bHLH110-like [Cucumis sativus]
Length = 427
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ QV+ LS+ + AG
Sbjct: 310 KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPAGGNK- 368
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
++QP DG E G + L+S+ LC++
Sbjct: 369 -------------------ATQPTHRSSVEDGNE-----------GGQNRDLRSRGLCLV 398
Query: 139 PISLASAI 146
P+ S +
Sbjct: 399 PLGCLSYV 406
>gi|449467128|ref|XP_004151277.1| PREDICTED: transcription factor bHLH123-like [Cucumis sativus]
Length = 433
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS L +GAV
Sbjct: 317 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYL-KSGAV 375
>gi|242074462|ref|XP_002447167.1| hypothetical protein SORBIDRAFT_06g029680 [Sorghum bicolor]
gi|241938350|gb|EES11495.1| hypothetical protein SORBIDRAFT_06g029680 [Sorghum bicolor]
Length = 454
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS L G
Sbjct: 334 TFKVRKEKLGDRVTALQQLVAPFGKTDTASVLHETIEYIKFLHDQVGVLSAPYLKNNG 391
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 169 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 216
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR+RI +R+R LQ+L+P+ K D + ML+E V YVKFL LQ+K+LS
Sbjct: 113 RRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLHLQIKLLS 158
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 227 RRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 272
>gi|359492693|ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
gi|302142540|emb|CBI19743.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 34/130 (26%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ QV+ LS+ + ++ +
Sbjct: 312 IKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKS 371
Query: 78 QLVADVPLSSALEGESIDG-GSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+ +++G S DG GS +P + L+S+ LC
Sbjct: 372 SI--------SMQGGSADGEGSEEPRRD-------------------------LRSRGLC 398
Query: 137 IMPISLASAI 146
++P+S S +
Sbjct: 399 LVPLSCMSYV 408
>gi|449460283|ref|XP_004147875.1| PREDICTED: transcription factor bHLH110-like [Cucumis sativus]
Length = 458
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ QV+ LS+ + AG
Sbjct: 341 KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPAGGNK- 399
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
++QP DG E G + L+S+ LC++
Sbjct: 400 -------------------ATQPTHRSSVEDGNE-----------GGQNRDLRSRGLCLV 429
Query: 139 PISLASAI 146
P+ S +
Sbjct: 430 PLGCLSYV 437
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI+ ++R LQ LVP K D A+MLDE + YVK+L+ QV+ + M
Sbjct: 301 RRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEM 347
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E VDYVKFL+ Q++ L+
Sbjct: 204 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQELT 252
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +M+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 193 RVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSM 242
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ++VP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 118 RREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 165
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 7/66 (10%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM------SRLGAA 73
RRERI +RM+ LQ+LVP CNK +A LDEI++Y++ L+ QV+ LSM SR+ +
Sbjct: 161 RRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMSTS 220
Query: 74 GAVAQL 79
A+ L
Sbjct: 221 PAIEGL 226
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKV 64
V ++RRE+I++RM+ LQ LVP CNK T +A MLDEI++YV+ L+ QV+V
Sbjct: 145 LVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQVEV 194
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP CNK A+ LD+I+++V+ L+ +V++LSM +L A +
Sbjct: 178 RREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEILSM-KLAAVNPIIDF 236
Query: 80 VADVPLSS---ALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
D L++ +L + S W + ++G QQ + + D A Q L
Sbjct: 237 NLDSILAAEGMSLMDSNFPNTVSPAVWPEIPHNGNRQQFQQSWQSD--AFHQPLWG---- 290
Query: 137 IMPISLASAIYRTRQPDAPAFVKPESS 163
R+ + P F+ PE+S
Sbjct: 291 -------------REENNPNFITPENS 304
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I +RM+ LQ+LVP CNK +A++LDEI++YV+ L QV+ LSM
Sbjct: 132 RREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLSM 179
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI+ ++R LQ LVP K D A+MLDE + YVK+L+ QV+ + M
Sbjct: 302 RRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEM 348
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 157 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 204
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|356542232|ref|XP_003539573.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 339
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS + +GA Q
Sbjct: 229 KVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYM-KSGAPIQ 287
Query: 79 LVADVPLSSALEGESID 95
+ + S EG D
Sbjct: 288 IQQNSGKSKEAEGPKQD 304
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 169 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 216
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ LVP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 171 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ LVP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 170 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 214
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 15/106 (14%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMS----RLGA--- 72
RRE+I+++M ALQ+++P CNK +A +LDEI++Y++ L+ QV+ LSM GA
Sbjct: 171 RREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTG 230
Query: 73 -------AGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGT 111
+G + L DV + + E+ + SQPEW DG
Sbjct: 231 PTIGVFPSGDLGTLPIDVHRTIYEQQEANETRVSQPEWLHMQVDGN 276
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ++VP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 68 RREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSM 115
>gi|358345067|ref|XP_003636605.1| Transcription factor bHLH123 [Medicago truncatula]
gi|355502540|gb|AES83743.1| Transcription factor bHLH123 [Medicago truncatula]
Length = 436
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 37/136 (27%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + + +
Sbjct: 324 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPI 383
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+Q K E D Q L+S+ LC
Sbjct: 384 QH---------------------------------QQSSGKSKEAD--GPKQDLRSRGLC 408
Query: 137 IMPISLASAIYRTRQP 152
++P+S S T +P
Sbjct: 409 LVPVS--STFPMTHEP 422
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ++VP CNK +A++LDEI++Y++ L+ QV+ LSM
Sbjct: 141 RREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSM 188
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRE+I +R++ LQ LVP+ K D + ML+E V Y+KF++LQ+K+LS
Sbjct: 264 RREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLS 309
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 7/58 (12%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM------SRLG 71
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM SR+G
Sbjct: 65 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIG 122
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 15/106 (14%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMS----RLGA--- 72
RRE+I+++M ALQ+++P CNK +A +LDEI++Y++ L+ QV+ LSM GA
Sbjct: 172 RREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTG 231
Query: 73 -------AGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGT 111
+G + L DV + + E+ + SQPEW DG
Sbjct: 232 PTIGVFPSGDLGTLPIDVHRTIYEQQEANETRVSQPEWLHMQVDGN 277
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R++ LQ LVP+ K D ML+E + YVKFL+LQV +LS
Sbjct: 229 RRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVNMLSSDEYWTYAPTTYNG 288
Query: 81 ADVPL 85
+ PL
Sbjct: 289 PETPL 293
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQELVP+ +K T+ + MLD VDY+K L+ QVK LS +R
Sbjct: 235 RVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSDNR 286
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 156 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 203
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ LVP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 171 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|312162767|gb|ADQ37380.1| unknown [Arabidopsis lyrata]
Length = 301
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + ++Y+KFL+ + KV S L
Sbjct: 184 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIEYIKFLQEHITEKVSSSPHL 243
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q D + L
Sbjct: 244 NSKGS---------------GE-------QKQWSDKSSNNTHNQ-------DCSPRLD-L 273
Query: 131 QSKALCIMPIS 141
S+ LC+MPIS
Sbjct: 274 PSRGLCLMPIS 284
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 92 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 139
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 109 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 156
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA 73
+LRRER++ RMRALQ LVP + D A+ML+E + YVKFL+ V+ S+ R AA
Sbjct: 130 RLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQ--SLERAAAA 182
>gi|356557631|ref|XP_003547119.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH123-like
[Glycine max]
Length = 468
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VL + GA
Sbjct: 353 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLRTPYMKNNGAP 412
Query: 77 AQLVAD 82
Q D
Sbjct: 413 IQHQQD 418
>gi|297804016|ref|XP_002869892.1| hypothetical protein ARALYDRAFT_492747 [Arabidopsis lyrata subsp.
lyrata]
gi|297315728|gb|EFH46151.1| hypothetical protein ARALYDRAFT_492747 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + ++Y+KFL+ + KV S L
Sbjct: 179 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIEYIKFLQEHITEKVSSSPHL 238
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q D + L
Sbjct: 239 NSKGS---------------GE-------QKQWSDKSSNNTHNQ-------DCSPRLD-L 268
Query: 131 QSKALCIMPIS 141
S+ LC+MPIS
Sbjct: 269 PSRGLCLMPIS 279
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 15/64 (23%)
Query: 19 QLRRERIADRMRALQELVPSCNK---------------TDRAAMLDEIVDYVKFLRLQVK 63
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+
Sbjct: 161 RVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVE 220
Query: 64 VLSM 67
LSM
Sbjct: 221 FLSM 224
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKV 64
Q S ++RRE+I +RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ QV+V
Sbjct: 262 QATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q++ L
Sbjct: 136 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFL 180
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 169 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 216
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 162 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 209
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 148 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 195
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+ +MRALQ+L+P+C K D+A++LDE + Y++ L+LQV+++SM
Sbjct: 241 RRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|356546916|ref|XP_003541866.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 460
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS + +GA
Sbjct: 348 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYM-KSGAP 406
Query: 77 AQLVADVPLSSALEGESID 95
Q+ + S EG D
Sbjct: 407 MQIQQNSGKSKEAEGPKQD 425
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 127 RRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQIRLL 171
>gi|255587936|ref|XP_002534446.1| transcription factor, putative [Ricinus communis]
gi|223525277|gb|EEF27938.1| transcription factor, putative [Ricinus communis]
Length = 305
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 34/125 (27%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + + +
Sbjct: 194 KVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIHH 253
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
QQ + ++ G L+S+ LC++
Sbjct: 254 ----------------------------------QQSSDKSKDPEGQKQADLRSRGLCLV 279
Query: 139 PISLA 143
P+S+
Sbjct: 280 PVSIT 284
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ Q + LSM
Sbjct: 151 RREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEFLSM 198
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+ +MRALQ+L+P+C K D+A++LDE + Y++ L+LQV+++SM
Sbjct: 241 RRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP C K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RRE+I +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+KV
Sbjct: 185 RREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKV 228
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C++ T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 161 RVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEFLSM 210
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA 73
+LRRER++ RMRALQ LVP + D A+ML+E + YVKFL+ V+ S+ R AA
Sbjct: 131 RLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQ--SLERAAAA 183
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRE+I +RM+ LQ+L+P CNK+ + +ML+++++YVK L +Q+ M + A + Q
Sbjct: 162 RREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF-MPHM--AMGMNQPP 218
Query: 81 ADVPLSS 87
A +P S
Sbjct: 219 AYIPFPS 225
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 100 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 147
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRERI +R++ LQ +VP+ K D + ML+E V YVKFL+LQ+KV ++
Sbjct: 288 RRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQIKVKAL 334
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ+LVP K D A+MLDE +Y++FL+ QV+ L
Sbjct: 365 RRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQVREL 409
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVK 63
++RRE+I++RM+ LQ+LVP C K T +A MLDEI++YV+FL+ QV+
Sbjct: 22 RVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQVE 67
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 146 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 193
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 26/131 (19%)
Query: 16 FVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 297 LAAKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNRQQ 356
Query: 76 VAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKAL 135
V L ++ G + E A+ + L + L
Sbjct: 357 VPHLK--------------------------NSTGVDNDGGGGGGEATAASKRDLTGRGL 390
Query: 136 CIMPISLASAI 146
C++PIS A+
Sbjct: 391 CLVPISSTFAV 401
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP CNK A+ LDEI+++V+ L+ QV+ LSM RL A
Sbjct: 195 RREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVEFLSM-RLAAVNPRIDF 253
Query: 80 VADVPLSSALEGESIDGG 97
D L SA G ID
Sbjct: 254 NLDSML-SAESGSLIDSN 270
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|357139676|ref|XP_003571405.1| PREDICTED: uncharacterized protein LOC100829711 [Brachypodium
distachyon]
Length = 390
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 29/130 (22%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV S L
Sbjct: 272 TFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGAHSAPYL------ 325
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
VP S + + D N+G E+ AA + L + LC
Sbjct: 326 KNRQQQVPHSKSSSTDKKD------------NNGGEE-----------AAARDLTGRGLC 362
Query: 137 IMPISLASAI 146
++PIS A+
Sbjct: 363 LVPISSTFAV 372
>gi|356545213|ref|XP_003541039.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 347
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + + +
Sbjct: 237 KVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPI 294
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRERI++++R LQ LVP K D A+ML+E + YVKFL+ Q+++L
Sbjct: 120 RLRRERISEKIRILQRLVPGGRKMDTASMLEEAIRYVKFLKRQIRLL 166
>gi|118486843|gb|ABK95256.1| unknown [Populus trichocarpa]
Length = 467
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 34/125 (27%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL Q VLS + +
Sbjct: 354 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQATVLSTPYMKNGNPI 413
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
QQ + D+ Q L+S+ LC
Sbjct: 414 QH----------------------------------QQAPEDKLNDLEGPKQDLRSRGLC 439
Query: 137 IMPIS 141
++PIS
Sbjct: 440 LVPIS 444
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A MLDE V YVKFL+ Q++ LS
Sbjct: 134 RVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELS 182
>gi|357446251|ref|XP_003593403.1| Transcription factor bHLH112 [Medicago truncatula]
gi|355482451|gb|AES63654.1| Transcription factor bHLH112 [Medicago truncatula]
Length = 416
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + +G+
Sbjct: 302 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYM-KSGSP 360
Query: 77 AQLVADVPLSSALEGESID 95
Q D + EG+ D
Sbjct: 361 IQHQQDCDNVNESEGKKQD 379
>gi|147835801|emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]
Length = 512
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 34/130 (26%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ QV+ LS+ + ++ +
Sbjct: 337 IKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKS 396
Query: 78 QLVADVPLSSALEGESIDG-GSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
S +++G S DG GS +P + L+S+ LC
Sbjct: 397 --------SISMQGGSADGEGSEEPRRD-------------------------LRSRGLC 423
Query: 137 IMPISLASAI 146
++P+S S +
Sbjct: 424 LVPLSCMSYV 433
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 116 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLL 160
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ +K T+ A MLD VDY+K L+ QVKV++ SR
Sbjct: 323 RVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESR 374
>gi|297726099|ref|NP_001175413.1| Os08g0179400 [Oryza sativa Japonica Group]
gi|125602395|gb|EAZ41720.1| hypothetical protein OsJ_26257 [Oryza sativa Japonica Group]
gi|255678199|dbj|BAH94141.1| Os08g0179400 [Oryza sativa Japonica Group]
Length = 467
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 26/128 (20%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L V
Sbjct: 349 HVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNRQQVPH 408
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIM 138
L ++ G + E A+ + L + LC++
Sbjct: 409 LK--------------------------NSTGVDNDGGGGGGEATAASKRDLTGRGLCLV 442
Query: 139 PISLASAI 146
PIS A+
Sbjct: 443 PISSTFAV 450
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQ 61
+LRRE++++R+RALQ LVP +K D A+MLDE Y+KFL+ Q
Sbjct: 308 AARLRREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+L P CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 132 RREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 179
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 14 LFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFL 58
+ + + RR+RI +RM+ALQEL+P C+KTD+A++LD +DY+K L
Sbjct: 206 VHNLSERRRDRINERMKALQELIPHCSKTDKASILDGAIDYMKSL 250
>gi|312162756|gb|ADQ37370.1| unknown [Arabidopsis lyrata]
Length = 352
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + ++Y+KFL+ + KV S L
Sbjct: 235 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIEYIKFLQEHITEKVSSSPYL 294
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q D + L
Sbjct: 295 NSKGS---------------GE-------QKQWSDKSSNNTHNQ-------DCSPRLD-L 324
Query: 131 QSKALCIMPIS 141
S+ LC+MPIS
Sbjct: 325 PSRGLCLMPIS 335
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ++VP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 155 RREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 202
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I +++R LQ++VP C+K+ A ML+EI++YV L+ QV+ LSM L AA
Sbjct: 174 RIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSM-ELAAASCSN 232
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWS 107
L S +G + E +KWS
Sbjct: 233 DLKNLTESSKKAQG--TNSTDDAQETQKWS 260
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ +K T+ A MLD VDY+K L+ QVKV++ SR
Sbjct: 316 RVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESR 367
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE++ Y+K L+ QV++++
Sbjct: 246 RRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMMN 291
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +M+ LQ+LVP CNK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 84 RVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSM 133
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
+LRRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q++ L
Sbjct: 50 RLRRERISEKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSL 96
>gi|125560356|gb|EAZ05804.1| hypothetical protein OsI_28041 [Oryza sativa Indica Group]
Length = 444
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 325 TFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYL 378
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 37/43 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+
Sbjct: 40 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 37/43 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 63
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+
Sbjct: 294 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|297848442|ref|XP_002892102.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
gi|297337944|gb|EFH68361.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
R + + ++MR LQ+LVP C+KTD+ ++LD ++Y+K L+LQ KV+SM
Sbjct: 133 RSDELCNKMRTLQQLVPDCHKTDKVSVLDNAIEYMKSLQLQFKVMSM 179
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRE+I ++M+ LQEL+P CNK+ + + L+++++Y+K L++Q++++S
Sbjct: 1154 RREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYMKSLQMQIQMMS 1199
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 38/49 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
RRE+I ++M+ LQEL+P CNK+ + + LD ++YVK+L+ Q++++ M +
Sbjct: 150 RREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQSQIQMILMGQ 198
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 37/48 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RRE+I ++M+ LQEL+P CNK+ + + L+++++YVK L +Q++ M+
Sbjct: 1584 RREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYVKSLEMQIQHYVMN 1631
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-----MSRLGAAGA 75
RRE+I + ++ LQEL+P CNK+ + + LD+ ++YVK+L+ Q++++S M + AG
Sbjct: 596 RREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQSQIQMMSTGQGMMPPMMYAGN 655
Query: 76 VAQLVADV 83
Q + +
Sbjct: 656 TQQFMPHM 663
>gi|18378953|ref|NP_563650.1| transcription factor HFR1 [Arabidopsis thaliana]
gi|20532238|sp|Q9FE22.1|HFR1_ARATH RecName: Full=Transcription factor HFR1; AltName: Full=Basic
helix-loop-helix protein 26; Short=AtbHLH26; Short=bHLH
26; AltName: Full=Protein LONG HYPOCOTYL IN FAR-RED 1;
AltName: Full=Protein REDUCED PHYTOCHROME SIGNALING;
AltName: Full=Reduced sensitivity to far-red light;
AltName: Full=Transcription factor EN 68; AltName:
Full=bHLH transcription factor bHLH026
gi|11870115|gb|AAG40617.1|AF324245_1 bHLH-like protein HFR1 [Arabidopsis thaliana]
gi|12025106|gb|AAG45733.1|AF288287_1 reduced phytochrome signaling 1 [Arabidopsis thaliana]
gi|13183644|gb|AAK15282.1|AF323182_1 basic helix-loop-helix FBI1 protein [Arabidopsis thaliana]
gi|332189297|gb|AEE27418.1| transcription factor HFR1 [Arabidopsis thaliana]
Length = 292
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 41/46 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
R E+++++MR LQ+LVP+C+KTD+ ++LD+ ++Y+K L+LQ++++S
Sbjct: 146 RDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS 191
>gi|357134233|ref|XP_003568722.1| PREDICTED: transcription factor bHLH68-like isoform 1 [Brachypodium
distachyon]
Length = 397
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAG 74
+++R+ER+ DR+ AL ++V KTD A++L E + YV+FL Q++ LS +G G
Sbjct: 247 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYVRFLLGQIEALSYPYMGHGG 304
>gi|90399083|emb|CAJ86024.1| B0808H03.1 [Oryza sativa Indica Group]
gi|90399269|emb|CAH68071.1| H0105C05.9 [Oryza sativa Indica Group]
Length = 440
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 328 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYL 381
>gi|125549865|gb|EAY95687.1| hypothetical protein OsI_17552 [Oryza sativa Indica Group]
Length = 439
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 327 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYL 380
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 39/45 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RR RI ++M+ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQV+++
Sbjct: 44 RRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMI 88
>gi|414880198|tpg|DAA57329.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 385
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 33/125 (26%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 271 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVASLSSPYLKNG--- 327
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+P+ +++ + G+E +D G Q L+S+ LC
Sbjct: 328 ------IPM------------------KQFQHKGSED------SKDNGDTKQDLRSRGLC 357
Query: 137 IMPIS 141
++P++
Sbjct: 358 LVPVA 362
>gi|357134235|ref|XP_003568723.1| PREDICTED: transcription factor bHLH68-like isoform 2 [Brachypodium
distachyon]
Length = 401
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 36/149 (24%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + YV+FL Q++ LS +G G
Sbjct: 247 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYVRFLLGQIEALSYPYMGHGG-- 304
Query: 77 AQLVADVPLSSALEGESIDGGSSQ-------PEWE----KWSNDGTEQQVAKLMEEDIGA 125
G S+ G + PE+ +N+ Q + DI
Sbjct: 305 -------------NGTSVQNGPTGEKNPGLFPEYPGQLLNHNNNTGGVQQQAGGQPDIYT 351
Query: 126 AMQF----------LQSKALCIMPISLAS 144
+Q L+S+ LC++P+S S
Sbjct: 352 QLQGAVSDEASKKDLRSRGLCLVPVSCTS 380
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ+LVP K D A+MLDE +Y++FL+ Q++ L
Sbjct: 394 RRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIREL 438
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ K T+ A MLD VDY+K L+ QVKVL+ SR
Sbjct: 335 RVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSR 386
>gi|413916948|gb|AFW56880.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 426
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS+ L
Sbjct: 307 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGSLSVPYL 360
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 102 RREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEFLSM 149
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ+LVP K D A+MLDE +Y++FL+ Q++ L
Sbjct: 378 RRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIREL 422
>gi|242080775|ref|XP_002445156.1| hypothetical protein SORBIDRAFT_07g004980 [Sorghum bicolor]
gi|241941506|gb|EES14651.1| hypothetical protein SORBIDRAFT_07g004980 [Sorghum bicolor]
Length = 411
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 298 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHEQVGSLSAPYL 351
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRE+I ++M+ LQ+L+P CNK+ + + LD+ ++YVK L+ Q++ + MS + AG Q +
Sbjct: 267 RREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM-MSPMMNAGNTQQFM 325
Query: 81 ADV 83
+
Sbjct: 326 PHM 328
>gi|357128823|ref|XP_003566069.1| PREDICTED: uncharacterized protein LOC100841119 [Brachypodium
distachyon]
Length = 318
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 36/144 (25%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL QV LS L + G
Sbjct: 202 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIGYIKFLHDQVASLSSPYLSSCGRA 261
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
Q + Q+ ++ D G A + L+S+ LC
Sbjct: 262 LQ--------------------------------DQHQLQGSIKVD-GKAKEDLRSRGLC 288
Query: 137 IMPISLASAIYRTRQPDAPAFVKP 160
++P+ ++ Y AP F P
Sbjct: 289 LVPV---ASTYTVANEAAPEFWNP 309
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ+LVP K D A+MLDE +Y++FL+ Q++ L
Sbjct: 382 RRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIREL 426
>gi|297834858|ref|XP_002885311.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
gi|297331151|gb|EFH61570.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
Length = 270
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 41/150 (27%)
Query: 6 CCHQQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
C Q S + ++R+ER+ +R+ ALQ+LV KTD A++L E + Y+KFL+ Q++VL
Sbjct: 141 CKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVL 200
Query: 66 SMSRLGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGA 125
S L S+DGG ++ D+ A
Sbjct: 201 -------------------CSPYLINHSLDGG--------------------VVTGDVMA 221
Query: 126 AMQF--LQSKALCIMPISLASAIYRTRQPD 153
AM+ L+S+ LC++P+S + + D
Sbjct: 222 AMKAKDLRSRGLCLVPVSSTVHVENSNGAD 251
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ LVP C++ T +A ML+EI++YVK L+ Q++ LSM
Sbjct: 168 RREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEFLSM 215
>gi|356514923|ref|XP_003526151.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 489
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + + +
Sbjct: 377 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPI 436
>gi|357452535|ref|XP_003596544.1| Transcription factor bHLH123 [Medicago truncatula]
gi|355485592|gb|AES66795.1| Transcription factor bHLH123 [Medicago truncatula]
Length = 437
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL--GAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV VLS + GA +
Sbjct: 327 KVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPSEI 386
Query: 77 AQ 78
Q
Sbjct: 387 QQ 388
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ K T+ A MLD VDY+K L+ QVKVL+ SR
Sbjct: 334 RVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSR 385
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ K T+ A MLD VDY+K L+ QVKVL+ SR
Sbjct: 313 RVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSR 364
>gi|115460766|ref|NP_001053983.1| Os04g0631600 [Oryza sativa Japonica Group]
gi|21741062|emb|CAD41686.1| OSJNBb0015D13.17 [Oryza sativa Japonica Group]
gi|113565554|dbj|BAF15897.1| Os04g0631600 [Oryza sativa Japonica Group]
gi|125591747|gb|EAZ32097.1| hypothetical protein OsJ_16289 [Oryza sativa Japonica Group]
Length = 437
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 325 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYL 378
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I +R++ LQ+LVP C K A MLD I+DYV+ L+ Q++ LSM +L AA A
Sbjct: 120 RVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSM-KLSAASACY 178
Query: 78 QLVA-DVPLSSALEGESI 94
L + D+ + +G +I
Sbjct: 179 DLNSLDIEPTDIFQGGNI 196
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 15/98 (15%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMS----------- 68
RRE+I++RM+ LQ+L+P CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 158 RREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVNSDVSNG 217
Query: 69 -RLG--AAGAVAQLVADVPLSSALEGESIDGGSSQPEW 103
++G +G + L +V + + E+ + SQP+W
Sbjct: 218 PKVGMFPSGDLNTLPIEVQRTMFDQQEADESRGSQPDW 255
>gi|255572178|ref|XP_002527029.1| hypothetical protein RCOM_1311480 [Ricinus communis]
gi|223533664|gb|EEF35401.1| hypothetical protein RCOM_1311480 [Ricinus communis]
Length = 243
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 28 RMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+M++L+EL+P C+K DRA+MLD+ ++Y+K L+L V++L + +G GA+ Q
Sbjct: 101 KMKSLRELIPHCHKQDRASMLDDAINYLKALKLHVEML--ANMGGRGALCQ 149
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM RL A
Sbjct: 218 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM-RLAAVNPRIDF 276
Query: 80 VADVPLSS---ALEGESIDGGSSQPEW 103
D L+S +L S +G + Q W
Sbjct: 277 NLDTILASENGSLMDGSFNGTAMQLAW 303
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK----------VLSMSRL 70
RRERI++R+R LQ+LVP K D A+MLDE Y++FL+ QV+ L+ +
Sbjct: 332 RRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQTLDRRNYGLTTADN 391
Query: 71 GAAGAVAQLVADVPLSSALEGES 93
A+ A A + A PL S G
Sbjct: 392 NASRATATMAASGPLMSYNNGHG 414
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q++ L
Sbjct: 106 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQL 150
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I +R++ LQ+LVP C K A MLD I+DYV+ L+ Q++ LSM +L AA A
Sbjct: 120 RVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSM-KLSAASACY 178
Query: 78 QLVA-DVPLSSALEGESI 94
L + D+ + +G +I
Sbjct: 179 DLNSLDIEPTDIFQGGNI 196
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RRE+I RM+ LQELVP CNK A+ LDEI+++V+ L+ QV+ LSM RL A
Sbjct: 219 RREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSM-RLAAVN 272
>gi|147845457|emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
Length = 489
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
I ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L + +
Sbjct: 196 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQNLELDQ 240
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRLGAAGA 75
V + RRERI++++R L+ +VP K D A+MLDE + Y KFL+ QV++L S++GA A
Sbjct: 126 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMA 185
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQELVP+ +K T+ A MLD VDY+K L+ Q K LS +R
Sbjct: 287 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSDNR 338
>gi|359493921|ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
Length = 361
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS + +GA
Sbjct: 249 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYM-KSGAS 307
Query: 77 AQLVADVPLSSALEGESID 95
Q + S EG D
Sbjct: 308 IQHQQNSEKSKEPEGPRQD 326
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRLGAAGA 75
V + RRERI++++R L+ +VP K D A+MLDE + Y KFL+ QV++L S++GA A
Sbjct: 125 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMA 184
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ+LVP K D A+MLDE +Y++FL+ Q++ L
Sbjct: 382 RRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIREL 426
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM RL A
Sbjct: 222 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM-RLAAVNPRIDF 280
Query: 80 VADVPLSSALEGESIDG 96
D L+S G +DG
Sbjct: 281 NLDTILASE-NGSLMDG 296
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM RL A
Sbjct: 222 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM-RLAAVNPRIDF 280
Query: 80 VADVPLSSALEGESIDG 96
D L+S G +DG
Sbjct: 281 NLDTILASE-NGSLMDG 296
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 32/36 (88%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVK 56
RR+RI ++M+ALQEL+P NK+D+A+MLDE ++Y+K
Sbjct: 350 RRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLK 385
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE + YVKFL+ Q++ L
Sbjct: 43 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQL 87
>gi|302143168|emb|CBI20463.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS + +GA
Sbjct: 272 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYM-KSGAS 330
Query: 77 AQLVADVPLSSALEGESID 95
Q + S EG D
Sbjct: 331 IQHQQNSEKSKEPEGPRQD 349
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSM 67
RRE+I RM+ LQELVP C+K AM LDEI+++V+ L+ QV++LSM
Sbjct: 218 RREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSM 265
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM LQ+LVP C+K T +A +L+EI++YV+ L+ QV+ LSM
Sbjct: 135 RVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSM 184
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LD I++YV+ L+ QV+ LSM
Sbjct: 117 RREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEFLSM 164
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A ML+EI++YV+ L+ Q++ LSM
Sbjct: 22 RVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQIEFLSM 71
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A MLDE V YVKFL+ Q++ LS
Sbjct: 97 RVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELS 145
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E V+YVKFL+ Q++ L+
Sbjct: 199 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQELT 247
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 71
++RR +I++R+R LQELVP+ K T+ + MLD VDY+K L++QVKV++ R G
Sbjct: 340 RVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVMNDGRAG 393
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 32/36 (88%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVK 56
RR+RI ++M+ALQEL+P NK+D+A+MLDE ++Y+K
Sbjct: 350 RRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLK 385
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I +++R LQ+LVP C+K+ A ML+EI++YV L+ QV+ LSM L AA
Sbjct: 165 RVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSM-ELAAASCSY 223
Query: 78 QLVADVPLSSALEGESIDGGSSQPEW--EKWSNDG 110
L + S + S G +W E++ + G
Sbjct: 224 DLNLETESSKKAQVTSSAGTQETQKWLRERYGDLG 258
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSM 67
RRE+I RM+ LQELVP C+K AM LDEI+++V+ L+ QV++LSM
Sbjct: 224 RREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSM 271
>gi|147788047|emb|CAN78236.1| hypothetical protein VITISV_016390 [Vitis vinifera]
Length = 477
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS + + ++
Sbjct: 360 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYMKSGASI 419
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+++M LQ LVP C+K T +A MLDEI+ YV+ L+ QV+ LSM
Sbjct: 173 RVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQNQVEFLSM 222
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 40/46 (86%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +K+D+A+MLDE+++Y+K L+ Q+++++
Sbjct: 282 RRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMIN 327
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRE+IA+R+R LQ L+P+ K D MLDE V YV+FL+ QV +L
Sbjct: 14 RREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLLK 59
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRLGAAGA 75
V + RRERI++++R L+ +VP K D A+MLDE + Y KFL+ QV++L S LG +
Sbjct: 103 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSHLGPPTS 162
Query: 76 VA 77
+
Sbjct: 163 TS 164
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RR +I +R+R LQ++VP C KT A MLDEI++YV+ L+ QV+ LSM +L AA
Sbjct: 163 RVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM-KLTAASQYY 221
Query: 78 QLVADVPLSSALEGESIDG 96
+D ++ + G
Sbjct: 222 DFNSDTDTLETIQRGKVHG 240
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV 62
RRERI +R+RALQ LVP+ K D ML+E ++YVKFL+LQ+
Sbjct: 255 RRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQL 296
>gi|297599447|ref|NP_001047162.2| Os02g0564700 [Oryza sativa Japonica Group]
gi|255671012|dbj|BAF09076.2| Os02g0564700 [Oryza sativa Japonica Group]
Length = 136
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 20/97 (20%)
Query: 66 SMSRLGAAGAV-AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIG 124
S R AGAV L D P E +DGG+ EQ+V KLME+++
Sbjct: 21 SGERQAGAGAVTGGLPGDQP-------ELLDGGAM-----------FEQEVVKLMEDNMT 62
Query: 125 AAMQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPE 161
AMQ+LQSK LC+MP++LASAI ++ + A V+PE
Sbjct: 63 TAMQYLQSKGLCLMPVALASAIS-AQKGTSSAAVRPE 98
>gi|194702476|gb|ACF85322.1| unknown [Zea mays]
Length = 287
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA- 75
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS LG
Sbjct: 133 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALSFPYLGHDNGD 192
Query: 76 ------VAQLVADVPLSSAL---EGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAA 126
L+ + S A+ +G + + E E + N G E+ +
Sbjct: 193 SMQQHNTNNLLLNHSTSDAMVQVQGPPM----TNQEGEVYGN-GIEE-----------GS 236
Query: 127 MQFLQSKALCIMPISLASAIYRTRQP 152
+ L+S+ LC++P+S S + P
Sbjct: 237 RKDLRSRGLCLVPVSCTSHLADDNGP 262
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ++VP CNK +A +LDEI++Y++ L+ QV+ L M
Sbjct: 118 RREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFM 165
>gi|357454875|ref|XP_003597718.1| Transcription factor bHLH68 [Medicago truncatula]
gi|124359631|gb|ABN06010.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355486766|gb|AES67969.1| Transcription factor bHLH68 [Medicago truncatula]
Length = 319
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS L A +
Sbjct: 178 LKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSTPYLDTAASKN 237
Query: 78 QLVADVPLSSALEGESI---DGGSSQPEWEKWSNDGTEQQVAKLMEEDI-GAAMQFLQSK 133
+ S +E S+ D G + + G +++ A + ++ G + L+S+
Sbjct: 238 MMRNQ--HSVHVERNSVFPEDPG------QLLDDTGLKRKGAPIPNQNAEGNKAKDLRSR 289
Query: 134 ALCIMPISLASAIYRTRQPD--APAF 157
LC++P+S + D APAF
Sbjct: 290 GLCLVPVSCTQHVGSENGADYWAPAF 315
>gi|449444919|ref|XP_004140221.1| PREDICTED: transcription factor bHLH69-like [Cucumis sativus]
Length = 262
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 41 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEGESIDGGSSQ 100
K ++A+ LD+ +D++K+L+LQ+K LS S+LG + + ++G
Sbjct: 168 KENQASALDDAIDHIKYLQLQIKDLSQSKLGGELSSEPFIF------------VEGYGHY 215
Query: 101 PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAI 146
++ ++ E+ V KLME D AA Q L++K L +MP+ +
Sbjct: 216 MNHQEMQSEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFGEGL 261
>gi|357454873|ref|XP_003597717.1| Transcription factor bHLH68 [Medicago truncatula]
gi|355486765|gb|AES67968.1| Transcription factor bHLH68 [Medicago truncatula]
Length = 328
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS L A +
Sbjct: 187 LKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSTPYLDTAASKN 246
Query: 78 QLVADVPLSSALEGESI---DGGSSQPEWEKWSNDGTEQQVAKLMEEDI-GAAMQFLQSK 133
+ S +E S+ D G + + G +++ A + ++ G + L+S+
Sbjct: 247 MMRNQ--HSVHVERNSVFPEDPG------QLLDDTGLKRKGAPIPNQNAEGNKAKDLRSR 298
Query: 134 ALCIMPISLASAIYRTRQPD--APAF 157
LC++P+S + D APAF
Sbjct: 299 GLCLVPVSCTQHVGSENGADYWAPAF 324
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMS 68
RRE+I++RM+ LQ LVP C++ T +A ML+EI++YVK L+ Q++ LSM
Sbjct: 37 RREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEFLSMK 85
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I+ RM LQ LVP C+K T +A +LDEI++YV+ L+ QV+ LSM
Sbjct: 154 RVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSM 203
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRLGA 72
V + RRERI++++R L+ +VP K D A+MLDE + Y KFL+ QV++L ++LGA
Sbjct: 108 VARRRRERISEKIRILKRMVPGGAKMDTASMLDEAIRYTKFLKRQVRLLQPHTQLGA 164
>gi|212275398|ref|NP_001130491.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194689282|gb|ACF78725.1| unknown [Zea mays]
gi|414875632|tpg|DAA52763.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 381
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA- 75
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS LG
Sbjct: 227 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALSFPYLGHDNGD 286
Query: 76 ------VAQLVADVPLSSAL---EGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAA 126
L+ + S A+ +G + + E E + N G E+ +
Sbjct: 287 SMQQHNTNNLLLNHSTSDAMVQVQGPPM----TNQEGEVYGN-GIEE-----------GS 330
Query: 127 MQFLQSKALCIMPISLASAIYRTRQP 152
+ L+S+ LC++P+S S + P
Sbjct: 331 RKDLRSRGLCLVPVSCTSHLADDNGP 356
>gi|217074074|gb|ACJ85397.1| unknown [Medicago truncatula]
Length = 307
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS L A +
Sbjct: 166 LKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSTPYLDTAASKN 225
Query: 78 QLVADVPLSSALEGESI---DGGSSQPEWEKWSNDGTEQQVAKLMEEDI-GAAMQFLQSK 133
+ S +E S+ D G + + G +++ A + ++ G + L+S+
Sbjct: 226 MMRNQ--HSVHVERNSVFPEDPG------QLLDDTGLKRKGAPIPNQNAEGNKAKDLRSR 277
Query: 134 ALCIMPISLASAIYRTRQPD--APAF 157
LC++P+S + D APAF
Sbjct: 278 GLCLVPVSCTQHVGSENGADYWAPAF 303
>gi|18402256|ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thaliana]
gi|75311549|sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic
helix-loop-helix protein 113; Short=AtbHLH113;
Short=bHLH 113; AltName: Full=Transcription factor EN
61; AltName: Full=bHLH transcription factor bHLH113
gi|11994473|dbj|BAB02475.1| unnamed protein product [Arabidopsis thaliana]
gi|332642727|gb|AEE76248.1| transcription factor bHLH113 [Arabidopsis thaliana]
Length = 270
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 44/162 (27%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
Q S + ++R+ER+ +R+ ALQ+LV KTD A++L E + Y+KFL+ Q++VL
Sbjct: 144 NQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVL--- 200
Query: 69 RLGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQ 128
S L S+DGG ++ D+ AAM+
Sbjct: 201 ----------------CSPYLINHSLDGG--------------------VVTGDVMAAMK 224
Query: 129 F--LQSKALCIMPISLASAIYRTRQPD--APAFVKPESSTPS 166
L+S+ LC++P+S + + D +PA + +++PS
Sbjct: 225 AKDLRSRGLCLVPVSSTVHVENSNGADFWSPATMG-HTTSPS 265
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R+R LQ LVP K D A+MLDE Y++FL+ Q++ L
Sbjct: 350 RRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDL 394
>gi|219887359|gb|ACL54054.1| unknown [Zea mays]
gi|413949419|gb|AFW82068.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 426
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+++R+ER+ DR+ AL ++V KTD A++L E + Y++FL Q++ LS +G
Sbjct: 271 TLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLGQIEALSYPYMGHGNLT 330
Query: 77 AQLVADVPLSS 87
+ + P S
Sbjct: 331 SSSTQNGPAGS 341
>gi|15217667|ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thaliana]
gi|218563530|sp|Q9SFZ3.2|BH110_ARATH RecName: Full=Transcription factor bHLH110; AltName: Full=Basic
helix-loop-helix protein 110; Short=AtbHLH110;
Short=bHLH 110; AltName: Full=Transcription factor EN
59; AltName: Full=bHLH transcription factor bHLH110
gi|332192739|gb|AEE30860.1| transcription factor bHLH110 [Arabidopsis thaliana]
Length = 453
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA----G 74
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ Q++ LS+ + A+ G
Sbjct: 332 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPG 391
Query: 75 AVAQLVA 81
+QLV+
Sbjct: 392 KASQLVS 398
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV 62
RRE+IA+R+R LQ L+P+ K D MLDE V YV+FL+ QV
Sbjct: 465 RREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQV 506
>gi|388522555|gb|AFK49339.1| unknown [Medicago truncatula]
Length = 328
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS L A +
Sbjct: 187 LKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSTPYLDTAASKN 246
Query: 78 QLVADVPLSSALEGESI---DGGSSQPEWEKWSNDGTEQQVAKLMEEDI-GAAMQFLQSK 133
+ S +E S+ D G + + G +++ A + ++ G + L+S+
Sbjct: 247 MMRNQ--HSVHVERNSVFPEDPG------QLLDDTGLKRKGAPIPNQNAEGNKAKDLRSR 298
Query: 134 ALCIMPISLASAIYRTRQPD--APAF 157
LC++P+S + D APAF
Sbjct: 299 GLCLVPVSCTQHVGSENGADYWAPAF 324
>gi|449448170|ref|XP_004141839.1| PREDICTED: transcription factor bHLH68-like [Cucumis sativus]
Length = 297
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 29/124 (23%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ AL ++V KTD A++L E + Y++FL+ Q++ LS L +A
Sbjct: 170 LKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLQSA---- 225
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
D+ S + GE + + ED M+ L+SK LC+
Sbjct: 226 --PKDLRNSQPMGGEEM-----------------------MKNEDEKRLMKDLRSKGLCL 260
Query: 138 MPIS 141
+P+S
Sbjct: 261 VPLS 264
>gi|293334153|ref|NP_001170271.1| uncharacterized protein LOC100384230 [Zea mays]
gi|224034735|gb|ACN36443.1| unknown [Zea mays]
gi|413945921|gb|AFW78570.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 394
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 71
++R+E++ DR+ ALQ+LV KTD A++L E ++Y++FL QV LS LG
Sbjct: 275 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIRFLHDQVASLSSPYLG 329
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RR +I +R+R LQ++VP C KT A MLDEI++YV+ L+ QV+ LSM +L AA
Sbjct: 173 RVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM-KLTAASTFY 231
Query: 78 QLVADV 83
A+
Sbjct: 232 DFNAET 237
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I +R++ LQ+LVP C K A MLD I+DYV+ L+ Q++ LSM +L AA A
Sbjct: 63 RVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSM-KLSAASACY 121
Query: 78 QLVA-DVPLSSALEGESI 94
L + D+ + +G +I
Sbjct: 122 DLNSLDIEPTDIFQGGNI 139
>gi|356523767|ref|XP_003530506.1| PREDICTED: transcription factor bHLH68-like isoform 1 [Glycine max]
Length = 347
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 21/149 (14%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS+ LG+
Sbjct: 207 TFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGS-- 264
Query: 77 AQLVADVPLSSALEGESI-----DGGSSQPEWEKWSNDGTEQQVAKLMEEDIG-AAMQFL 130
++ +++GE D G + N+ ++ A E+D A + L
Sbjct: 265 ----GNMRHQQSVQGEKNCIFPEDPG-------QLLNENCLKRKAASSEQDSQEEANKDL 313
Query: 131 QSKALCIMPISLASAIYRTRQPD--APAF 157
+S+ LC++P+S + D APAF
Sbjct: 314 RSRGLCLVPVSCTLQVGSDNGADYWAPAF 342
>gi|449528525|ref|XP_004171254.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH68-like
[Cucumis sativus]
Length = 393
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS+ LG
Sbjct: 247 TFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTSGS 306
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+ S L+GE P N + V++ EE + L+S+ LC
Sbjct: 307 TRQHQHQQHS--LQGERNCVFPEDPGQLLNENCLKRKGVSEQEEE----GKKDLRSRGLC 360
Query: 137 IMPISLASAIYRTRQPD--APAF 157
++P+S + D APAF
Sbjct: 361 LVPVSCTLQVGSDNGADYWAPAF 383
>gi|21536756|gb|AAM61088.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 44/154 (28%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
+ ++R+ER+ +R+ ALQ+LV KTD A++L E + Y+KFL+ Q++VL
Sbjct: 152 IAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVL----------- 200
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF--LQSKA 134
S L S+DGG ++ D+ AAM+ L+S+
Sbjct: 201 --------CSPYLINHSLDGG--------------------VVTGDVMAAMKAKDLRSRG 232
Query: 135 LCIMPISLASAIYRTRQPD--APAFVKPESSTPS 166
LC++P+S + + D +PA + +++PS
Sbjct: 233 LCLVPVSSTVHVENSNGADFWSPATMG-HTTSPS 265
>gi|449490536|ref|XP_004158633.1| PREDICTED: transcription factor bHLH69-like [Cucumis sativus]
Length = 262
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 41 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEGESIDGGSSQ 100
K ++A+ LD+ +D++K+L+LQ+K LS S+LG + + ++G
Sbjct: 168 KENQASALDDAIDHIKYLQLQIKDLSQSKLGGELSSEPFIF------------VEGYGHY 215
Query: 101 PEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAI 146
++ ++ E+ V KLME D AA Q L++K L +MP+ +
Sbjct: 216 MNHQEMQSEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGL 261
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP CNK A+ LD+I+++V+ L+ +V++LSM +L A V
Sbjct: 206 RREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSM-KLAAVNPVIDF 264
Query: 80 VAD 82
D
Sbjct: 265 NLD 267
>gi|449449517|ref|XP_004142511.1| PREDICTED: transcription factor bHLH68-like [Cucumis sativus]
Length = 394
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS+ LG
Sbjct: 248 TFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTSGS 307
Query: 77 AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALC 136
+ S L+GE P N + V++ EE + L+S+ LC
Sbjct: 308 TRQHQHQQHS--LQGERNCVFPEDPGQLLNENCLKRKGVSEQEEE----GKKDLRSRGLC 361
Query: 137 IMPISLASAIYRTRQPD--APAF 157
++P+S + D APAF
Sbjct: 362 LVPVSCTLQVGSDNGADYWAPAF 384
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RR +I +R+R LQ++VP C KT A MLDEI++YV+ L+ QV+ LSM +L AA
Sbjct: 172 RVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM-KLTAASTFY 230
Query: 78 QLVADV 83
A+
Sbjct: 231 DFNAET 236
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A MLDE + YVKFL+ Q++ L+
Sbjct: 186 RVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQIQELT 234
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV 62
RR RI+DR + LQ LVP K D +MLDE + YVKFL+ Q+
Sbjct: 60 RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 101
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQ+LVP+ +K T+ A MLD VDY+K L+ Q K LS +R
Sbjct: 298 RVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKTLSDNR 349
>gi|223702440|gb|ACN21651.1| putative basic helix-loop-helix protein BHLH15 [Lotus japonicus]
Length = 274
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 34/133 (25%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
R+E++ +R+ ALQ+LV KTD A++L E Y+KFL+ QV+VL L + +Q
Sbjct: 166 RKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIKFLQDQVQVLCSPYLQRLPSCSQ-- 223
Query: 81 ADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPI 140
DG NDG E++ KL L+S+ LC++P+
Sbjct: 224 ------------PGDG----------DNDGGEEEAEKLN----------LRSRGLCLIPV 251
Query: 141 SLASAIYRTRQPD 153
S + T D
Sbjct: 252 SCTVHVASTNGAD 264
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E V+YVKFL+ +++ LS
Sbjct: 191 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELS 239
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAG 74
RRE+I RM+ LQELVP CNK A+ LDEI+ +V+ L+ QV+ LSM RL A
Sbjct: 215 RREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQVEFLSM-RLAAVN 268
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRE+I++++R LQ LVP +K D +MLDE Y+KFLR Q+K L
Sbjct: 200 RREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|391224323|emb|CCI61496.1| unnamed protein product [Arabidopsis halleri]
Length = 320
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 34/131 (25%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + ++Y+KFL+ Q+ KV S L
Sbjct: 205 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIEYIKFLQEQITEKVSSSPYL 264
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ Q ++WS+ + +D + Q L
Sbjct: 265 NSKGSGEQ-------------------------KQWSDKSSTHN------QDY-SPRQDL 292
Query: 131 QSKALCIMPIS 141
+S+ LC++PIS
Sbjct: 293 RSRGLCLIPIS 303
>gi|297826623|ref|XP_002881194.1| hypothetical protein ARALYDRAFT_482096 [Arabidopsis lyrata subsp.
lyrata]
gi|297327033|gb|EFH57453.1| hypothetical protein ARALYDRAFT_482096 [Arabidopsis lyrata subsp.
lyrata]
Length = 153
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 44/151 (29%)
Query: 14 LFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA 73
L F + R++++ +R+ ALQ+LV KTD A++L E + Y++FL+ QVKVLS L A
Sbjct: 34 LSFSSKERKDKLGERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQAT 93
Query: 74 GAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSK 133
+SQ E E++S L+SK
Sbjct: 94 PT----------------------TSQEELEEYS----------------------LRSK 109
Query: 134 ALCIMPISLASAIYRTRQPDAPAFVKPESST 164
LC++P+ S + +T D A VK +S+
Sbjct: 110 GLCLVPLEYTSGVAQTNGADIWAPVKTPTSS 140
>gi|356523020|ref|XP_003530140.1| PREDICTED: transcription factor bHLH68-like [Glycine max]
Length = 317
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 18 VQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
+++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS LG
Sbjct: 181 LKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNM 240
Query: 78 QLVADVPLSSALEGESI---DGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKA 134
+ P S E S+ D G + +++G +++ A +D + L+S+
Sbjct: 241 R----NPQSVHGERNSVFPEDPG------QLLNDNGLKRKGAP--NQDAKDKPRDLKSRG 288
Query: 135 LCIMPISLASAIYRTRQPD--APAF 157
LC++P+S + D APA+
Sbjct: 289 LCLVPVSCTQHVGNENGADYWAPAY 313
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 38/50 (76%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
Q RR +I +R++ LQ+LVP C+K+++A+ LD+ + Y+K L+ QV+ +S+
Sbjct: 223 QRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVG 272
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRE+I++++R LQ LVP +K D +MLDE Y+KFLR Q+K L
Sbjct: 200 RREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQELVP+ +K T+ + MLD VDY+K L+ Q K+L+ +R
Sbjct: 301 RVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNR 352
>gi|77556979|gb|ABA99775.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 387
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 14 LFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
LF RR +I +R R LQ LVP C+K+++A+ LD+ + Y+K L+ Q+K +S+
Sbjct: 219 LFTKFHRRRFKITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSV 272
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++R+R LQELVP+ +K T+ A MLD VDY+K L+ QVK L+ SR
Sbjct: 338 RVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSR 389
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+ +MRALQ+++P+C K D+A++LDE V Y++ L+ QV+++SM
Sbjct: 238 RRDEFNKKMRALQDILPNCYKDDKASLLDEAVKYMRTLQHQVQMMSM 284
>gi|222619374|gb|EEE55506.1| hypothetical protein OsJ_03706 [Oryza sativa Japonica Group]
Length = 340
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 226 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHEQVASLSSPYL 279
>gi|147832536|emb|CAN77172.1| hypothetical protein VITISV_041271 [Vitis vinifera]
Length = 342
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 19/131 (14%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGA-AGA 75
++R+E++ DR+ AL +LV KTD A++L E + Y++FL+ Q++ LS+ LG+ +G
Sbjct: 202 TFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSGN 261
Query: 76 VAQLVADVPLSSALEGESI-----DGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ Q S+++GE D G + ND ++ +E + L
Sbjct: 262 MRQ------QPSSVQGERNCIFPEDPG-------QLLNDNGMKRKGASDQESHEEPKKDL 308
Query: 131 QSKALCIMPIS 141
+S+ LC++P+S
Sbjct: 309 RSRGLCLVPVS 319
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQELVP+ +K T+ + MLD VDY+K L+ Q K+L+ +R
Sbjct: 295 RVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNR 346
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR +I++R+R LQELVP+ K T+ A MLD VDY+K L+ QVKVL+ R
Sbjct: 341 RVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGR 392
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E V+YVKFL+ +++ LS
Sbjct: 121 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELS 169
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLR 59
++RRERI++RM+ L+ LVP CNK T +A MLDEI++YV+ L+
Sbjct: 166 RVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|297597748|ref|NP_001044465.2| Os01g0784900 [Oryza sativa Japonica Group]
gi|53792455|dbj|BAD53363.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|255673758|dbj|BAF06379.2| Os01g0784900 [Oryza sativa Japonica Group]
Length = 392
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 278 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHEQVASLSSPYL 331
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQ+LVP+ +K T+ + MLD VDY+K L+ QV+ LS +R
Sbjct: 355 RVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVETLSENR 406
>gi|226506288|ref|NP_001144636.1| uncharacterized protein LOC100277655 [Zea mays]
gi|195644902|gb|ACG41919.1| hypothetical protein [Zea mays]
Length = 390
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
++R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS L
Sbjct: 275 TFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVASLSSPYL 328
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RR +I +R+R L+++VP C KT A MLDEI++YV+ L+ QV+ LSM +L AA +
Sbjct: 164 RVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM-KLAAASSFY 222
Query: 78 QLVADVPLSSALE 90
++ S L+
Sbjct: 223 DFNSEADAISKLQ 235
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,242,360,319
Number of Sequences: 23463169
Number of extensions: 74743082
Number of successful extensions: 240539
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2226
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 237322
Number of HSP's gapped (non-prelim): 2855
length of query: 166
length of database: 8,064,228,071
effective HSP length: 127
effective length of query: 39
effective length of database: 9,379,372,904
effective search space: 365795543256
effective search space used: 365795543256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)