BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040019
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 209 bits (532), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 118/135 (87%), Gaps = 1/135 (0%)
Query: 32 LQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALEG 91
LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV D+PLSS++E
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 234
Query: 92 ESIDGG-SSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E+ +GG + QP WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLA AIY ++
Sbjct: 235 ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 294
Query: 151 QPDAPAFVKPESSTP 165
PD + VKPE++ P
Sbjct: 295 PPDTSSVVKPENNPP 309
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 114/136 (83%), Gaps = 7/136 (5%)
Query: 31 ALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSSALE 90
+LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG AGAVA LV ++PLSS++E
Sbjct: 172 SLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE 231
Query: 91 GESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAIYRTR 150
E +Q WEKWSNDGTE+QVAKLMEE++GAAMQ LQSKALCIMPISLA AIY ++
Sbjct: 232 DE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQ 285
Query: 151 QPD-APAFVKPESSTP 165
PD + + VKPE + P
Sbjct: 286 PPDTSSSIVKPEMNPP 301
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
+LRRERIA+RM+ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG A +V+
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 213
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDG---TEQQVAKLMEEDIGAAMQFLQSKAL 135
+++ S ++ GGS + SND TE QVAKLMEED+G+AMQ+LQ K L
Sbjct: 214 QISEAGGSHGNASSAMVGGS---QTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGL 270
Query: 136 CIMPISLASAIY----RTRQPDAPAFV 158
C+MPISLA+AI +R P P V
Sbjct: 271 CLMPISLATAISTATCHSRNPLIPGAV 297
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 13/142 (9%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVA 77
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRL GAA A +
Sbjct: 146 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASS 205
Query: 78 QLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCI 137
Q+ D GGS + TE QVAKLMEED+G+AMQ+LQ K LC+
Sbjct: 206 QISEDA------------GGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCL 253
Query: 138 MPISLASAIYRTRQPDAPAFVK 159
MPISLA+ I P FVK
Sbjct: 254 MPISLATTISTATCPSRSPFVK 275
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 104/157 (66%), Gaps = 17/157 (10%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV-- 76
+LRRERIA+RM++LQELVP+ NKTD+A+MLDEI++YV+FL+LQVKVLSMSRLG AG+V
Sbjct: 115 RLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGP 174
Query: 77 ----------AQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAA 126
+L A + L G GSS TEQ+VAKLMEED+G+A
Sbjct: 175 RLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRS-----TEQRVAKLMEEDMGSA 229
Query: 127 MQFLQSKALCIMPISLASAIYRTRQPDAPAFVKPESS 163
MQ+LQ K LC+MPISLA+AI + + P SS
Sbjct: 230 MQYLQGKGLCLMPISLATAISSSTTHSRGSLFNPISS 266
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI ++MRALQEL+P+CNK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 355 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 401
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 43/47 (91%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+RI +RM+ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 296 RRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RMR LQELVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 222 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 271
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 41/47 (87%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR RI ++M+ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 209 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 284 RRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNG 343
Query: 81 ADVPLSS 87
D+ LSS
Sbjct: 344 MDIGLSS 350
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 368
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I++RMR LQ LVP C+K T +A MLDEI++YV+ L+ QV+ LSM + V
Sbjct: 152 RVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVY 211
Query: 78 QLVADV 83
+D+
Sbjct: 212 DFGSDL 217
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRLG 71
RR +I ++M+ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ LG
Sbjct: 105 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I +RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 317 RVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 274 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I++RM LQ+LVP CN+ T +A MLDEI++YV+ L+ QV+ LSM +L +
Sbjct: 209 RREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM-KLATVNPRMEF 267
Query: 80 VADVPLSSAL--EGESI 94
A+ LS+ + GES+
Sbjct: 268 NANASLSTEMIQPGESL 284
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 41/50 (82%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RR++I + M+ALQEL+P C KTDR++MLD++++YVK L+ Q+++ SM +
Sbjct: 289 RRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHV 338
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQ 78
++R+E++ DR+ ALQ+LV KTD A++L+E V+Y+KFL+ QV VLS G+V Q
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQ 232
Query: 79 LVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQF--LQSKALC 136
S +GE +EED + ++ L S+ LC
Sbjct: 233 QQCSNKKSINTQGE--------------------------VEEDECSPRRYVDLSSRGLC 266
Query: 137 IMPI 140
+MPI
Sbjct: 267 LMPI 270
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRERI +R+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L +A
Sbjct: 255 RRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNG 314
Query: 81 ADVPL 85
D+ L
Sbjct: 315 MDIGL 319
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
PE=2 SV=1
Length = 301
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 32/131 (24%)
Query: 13 SLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQV--KVLSMSRL 70
S F ++R+E++ DR+ ALQ+LV KTD A++L + +DY+KFL+ Q+ KV + L
Sbjct: 184 SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHL 243
Query: 71 GAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFL 130
+ G+ GE Q +W S++ T Q + Q L
Sbjct: 244 NSIGS---------------GE-------QKQWSDKSSNNTHNQNC--------SPRQDL 273
Query: 131 QSKALCIMPIS 141
+S+ LC+MPIS
Sbjct: 274 RSRGLCLMPIS 284
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAV 76
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM +L A V
Sbjct: 239 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSM-KLSAVNPV 296
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
++RRE+I++RM+ LQ+LVP C+K T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL
Sbjct: 219 RRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RRERI DR++ LQ LVP+ K D + ML++ V YVKFL+LQ+K+LS
Sbjct: 150 RRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 203 RREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSM 250
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL-GAAGAVAQL 79
RRERI++R++ LQELVP+ K D ML++ + YVKFL++QVKVL+ A G A
Sbjct: 213 RRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWPAQGGKAPD 272
Query: 80 VADV 83
++ V
Sbjct: 273 ISQV 276
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
RRERI++++R LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 287 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 37/41 (90%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 65
I +RM+ALQEL+P C+KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAM-LDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQL 79
RRE+I RM+ LQELVP C+K A+ LDEI+++V+ L+ QV++LSM RL A
Sbjct: 203 RREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSM-RLAAVNPRIDF 261
Query: 80 VADVPLSSALEGESIDG---GSSQPEWEKWSNDGTEQ 113
D L+S G +DG S + ++W DG Q
Sbjct: 262 NLDSILASE-NGSLMDGSFNAESYHQLQQWPFDGYHQ 297
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I+ +M+ LQ++VP CNK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 159 RREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 39/46 (84%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
RR++I RM+ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 225 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 70
RRE+I +R++ LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS L
Sbjct: 185 RREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 234
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 25 IADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
I +RM+ALQEL+P C++TD+A++LDE +DY+K L++Q++V+ M
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWM 314
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 15/106 (14%)
Query: 21 RRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMS----RLGA--- 72
RRE+I+++M ALQ+++P CNK +A +LDEI++Y++ L+ QV+ LSM GA
Sbjct: 171 RREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTG 230
Query: 73 -------AGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGT 111
+G + L DV + + E+ + SQPEW DG
Sbjct: 231 PTIGVFPSGDLGTLPIDVHRTIYEQQEANETRVSQPEWLHMQVDGN 276
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 67
RR+ +MRALQ+L+P+C K D+A++LDE + Y++ L+LQV+++SM
Sbjct: 241 RRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRE+I +RM+ LQ+L+P CNK+ + +ML+++++YVK L +Q+ M + A + Q
Sbjct: 162 RREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF-MPHM--AMGMNQPP 218
Query: 81 ADVPLSS 87
A +P S
Sbjct: 219 AYIPFPS 225
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 21 RRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 67
RRE+I++RM+ LQ+LVP CNK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 154 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 41/46 (89%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 66
R E+++++MR LQ+LVP+C+KTD+ ++LD+ ++Y+K L+LQ++++S
Sbjct: 146 RDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS 191
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
RRE+I ++M+ LQ+L+P CNK+ + + LD+ ++YVK L+ Q++ + MS + AG Q +
Sbjct: 267 RREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM-MSPMMNAGNTQQFM 325
Query: 81 ADV 83
+
Sbjct: 326 PHM 328
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RRE+I +R++ LQ+LVP C K A MLD I+DYV+ L+ Q++ LSM +L AA A
Sbjct: 120 RVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSM-KLSAASACY 178
Query: 78 QLVA-DVPLSSALEGESI 94
L + D+ + +G +I
Sbjct: 179 DLNSLDIEPTDIFQGGNI 196
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRLGAAGA 75
V + RRERI++++R L+ +VP K D A+MLDE + Y KFL+ QV++L S++GA A
Sbjct: 126 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMA 185
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 44/162 (27%)
Query: 9 QQMFSLFFVVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 68
Q S + ++R+ER+ +R+ ALQ+LV KTD A++L E + Y+KFL+ Q++VL
Sbjct: 144 NQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVL--- 200
Query: 69 RLGAAGAVAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQ 128
S L S+DGG ++ D+ AAM+
Sbjct: 201 ----------------CSPYLINHSLDGG--------------------VVTGDVMAAMK 224
Query: 129 F--LQSKALCIMPISLASAIYRTRQPD--APAFVKPESSTPS 166
L+S+ LC++P+S + + D +PA + +++PS
Sbjct: 225 AKDLRSRGLCLVPVSSTVHVENSNGADFWSPATMG-HTTSPS 265
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 19 QLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAA----G 74
++R+E++ DR+ ALQ+LV KTD A++L E + Y+KFL+ Q++ LS+ + A+ G
Sbjct: 332 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPG 391
Query: 75 AVAQLVA 81
+QLV+
Sbjct: 392 KASQLVS 398
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSR 69
++RR RI++RMR LQELVP+ +K T+ + MLD VDY+K L+ Q K+L+ +R
Sbjct: 295 RVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNR 346
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVA 77
++RR +I +R++ LQ++VP C KT A MLDEI++YV+ L+ QV+ LSM +L AA +
Sbjct: 163 RVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSM-KLTAASSYY 221
Query: 78 QLVADV 83
++
Sbjct: 222 DFNSET 227
>sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123
PE=2 SV=1
Length = 454
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 35/121 (28%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV 80
R+E++ DR+ ALQ+LV KTD A++L E ++Y+KFL QV LS + +GA Q
Sbjct: 346 RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYM-KSGASLQ-- 402
Query: 81 ADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPI 140
+ S+ TE +V++ E D L+S+ LC++P+
Sbjct: 403 -----------------------HQQSDHSTELEVSE--EPD-------LRSRGLCLVPV 430
Query: 141 S 141
S
Sbjct: 431 S 431
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 19 QLRRERIADRMRALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLS 66
++RR RI+DR+R LQELVP+ +K T+ A ML+E V+YVK L+ Q++ L+
Sbjct: 200 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 248
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 19 QLRRERIADRMRALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA 75
++RR +I +R+R LQ++VP C K A MLDEI++YV+ L+ QV+ LSM +L AA +
Sbjct: 161 RVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSM-KLTAASS 217
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 21 RRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 64
RR RI+DR R L+ LVP +K D +ML++ + YVKFL+ QV +
Sbjct: 52 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 95
>sp|Q7XHI5|BH133_ARATH Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133
PE=2 SV=1
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 42/162 (25%)
Query: 17 VVQLRRERIADRMRALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGA- 75
+++R+E++ R+ +L +LV KTD A++L E + Y++FL Q++ LS+ G
Sbjct: 217 TLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRN 276
Query: 76 ------------------VAQLVADVPLSSALEGESIDGGSSQPEWEKWSNDGTEQQVAK 117
QLV + + + S D S P E
Sbjct: 277 NMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEE------------- 323
Query: 118 LMEEDIGAAMQFLQSKALCIMPISLASAIYRTRQPD--APAF 157
M+ L+S+ LC++PIS + D APAF
Sbjct: 324 --------PMKDLRSRGLCLVPISCTLQVGSDNGADYWAPAF 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,888,483
Number of Sequences: 539616
Number of extensions: 1774449
Number of successful extensions: 6043
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 5886
Number of HSP's gapped (non-prelim): 153
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)